AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042626.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042626.01.T01 MTR_8g018430 93.380 861 48 1 39 890 1 861 0.0 1675
MsG0880042626.01.T01 MTR_8g018510 80.716 866 151 4 40 890 5 869 0.0 1461
MsG0880042626.01.T01 MTR_8g018520 81.744 860 144 2 44 890 9 868 0.0 1461
MsG0880042626.01.T01 MTR_8g018570 78.770 862 168 4 44 890 9 870 0.0 1428
MsG0880042626.01.T01 MTR_8g018550 79.651 860 162 2 44 890 9 868 0.0 1420
MsG0880042626.01.T01 MTR_8g020990 76.744 860 187 2 44 890 9 868 0.0 1394
MsG0880042626.01.T01 MTR_8g018690 76.102 862 186 3 44 890 9 865 0.0 1373
MsG0880042626.01.T01 MTR_8g018690 73.898 862 185 4 44 890 9 845 0.0 1321
MsG0880042626.01.T01 MTR_8g018450 75.172 870 156 10 39 890 1 828 0.0 1310
MsG0880042626.01.T01 MTR_2g099570 68.182 858 257 5 44 890 9 861 0.0 1226
MsG0880042626.01.T01 MTR_8g018420 66.276 854 274 3 47 890 7 856 0.0 1196
MsG0880042626.01.T01 MTR_2g099560 63.395 866 300 5 39 890 1 863 0.0 1150
MsG0880042626.01.T01 MTR_5g024020 63.310 864 293 8 46 890 9 867 0.0 1139
MsG0880042626.01.T01 MTR_8g018730 60.834 863 319 7 44 890 5 864 0.0 1112
MsG0880042626.01.T01 MTR_8g018735 60.759 869 320 7 39 890 1 865 0.0 1107
MsG0880042626.01.T01 MTR_3g081130 60.373 858 325 6 44 890 5 858 0.0 1097
MsG0880042626.01.T01 MTR_8g018730 59.397 862 303 7 44 890 5 834 0.0 1077
MsG0880042626.01.T01 MTR_5g024020 60.764 864 279 9 46 890 9 831 0.0 1073
MsG0880042626.01.T01 MTR_8g018620 62.295 854 255 11 49 890 9 807 0.0 1071
MsG0880042626.01.T01 MTR_8g018650 61.547 853 263 9 49 890 9 807 0.0 1066
MsG0880042626.01.T01 MTR_3g081130 61.724 789 287 6 113 890 2 786 0.0 1030
MsG0880042626.01.T01 MTR_8g018590 61.192 822 265 11 93 890 32 823 0.0 1010
MsG0880042626.01.T01 MTR_1g083020 56.636 874 340 9 36 890 5 858 0.0 983
MsG0880042626.01.T01 MTR_7g113410 55.504 863 343 10 50 890 24 867 0.0 965
MsG0880042626.01.T01 MTR_1g104650 54.441 867 350 10 50 890 9 856 0.0 959
MsG0880042626.01.T01 MTR_8g018730 62.457 586 208 4 315 890 1 584 0.0 780
MsG0880042626.01.T01 MTR_8g018735 59.061 618 233 6 39 639 1 615 0.0 756
MsG0880042626.01.T01 MTR_8g020970 44.268 820 433 12 88 889 113 926 0.0 689
MsG0880042626.01.T01 MTR_8g021020 77.723 404 77 2 500 890 28 431 0.0 659
MsG0880042626.01.T01 MTR_3g479460 42.029 828 429 16 92 890 98 903 0.0 617
MsG0880042626.01.T01 MTR_4g066170 40.251 877 475 21 44 890 49 906 0.0 616
MsG0880042626.01.T01 MTR_8g080230 41.505 824 438 16 95 890 109 916 0.0 615
MsG0880042626.01.T01 MTR_4g088810 42.170 811 420 14 98 889 114 894 0.0 612
MsG0880042626.01.T01 MTR_3g079450 42.526 776 416 14 136 890 136 902 0.0 602
MsG0880042626.01.T01 MTR_8g011340 40.200 801 425 15 87 851 46 828 0.0 585
MsG0880042626.01.T01 MTR_3g079420 40.487 862 459 18 59 890 28 865 0.0 568
MsG0880042626.01.T01 MTR_8g020970 42.982 570 301 12 88 639 113 676 2.85e-140 432
MsG0880042626.01.T01 MTR_6g452500 39.101 601 322 11 297 873 25 605 3.26e-137 423
MsG0880042626.01.T01 MTR_3g079450 43.021 523 271 12 136 639 136 650 7.48e-125 391
MsG0880042626.01.T01 MTR_7g012030 55.285 123 54 1 538 659 81 203 2.83e-36 136
MsG0880042626.01.T01 MTR_6g046330 58.475 118 46 2 545 659 87 204 7.26e-35 135
MsG0880042626.01.T01 MTR_8g463810 31.034 261 115 7 416 675 161 357 4.62e-29 121
MsG0880042626.01.T01 MTR_4g088805 39.560 91 55 0 799 889 1 91 1.95e-16 75.9
MsG0880042626.01.T01 MTR_8g018910 94.286 35 2 0 27 61 26 60 5.27e-16 73.6
MsG0880042626.01.T01 MTR_2g005920 51.786 56 27 0 763 818 58 113 4.49e-13 67.0
MsG0880042626.01.T01 MTR_7g113408 42.857 63 35 1 782 844 8 69 7.11e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042626.01.T01 AT1G55020 53.118 866 360 11 47 890 18 859 0.0 949
MsG0880042626.01.T01 AT3G22400 53.547 874 357 13 47 890 32 886 0.0 940
MsG0880042626.01.T01 AT1G72520 42.996 821 442 11 88 890 114 926 0.0 681
MsG0880042626.01.T01 AT1G17420 42.718 824 439 12 88 890 108 919 0.0 672
MsG0880042626.01.T01 AT3G45140 41.183 845 443 20 73 890 79 896 0.0 600
MsG0880042626.01.T01 AT1G67560 40.750 827 453 16 88 890 104 917 0.0 588
MsG0880042626.01.T01 AT3G45140 42.839 768 396 18 149 890 4 754 0.0 588

Find 201 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8:-11611517 MsG0880042626.01.T01:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8:-11611657 MsG0880042626.01.T01:CDS
CTATAATGGTCAAGTCAATT+AGG 0.235454 8:+11611350 None:intergenic
GTTACCTCCGCACCGATTCT+AGG 0.266335 8:-11614387 MsG0880042626.01.T01:CDS
TCACTGTCCCCTTCACCTTT+TGG 0.268716 8:+11615027 None:intergenic
TGCCTATCTAGCTTGCTCTT+TGG 0.284977 8:+11612918 None:intergenic
GTTTGATTGTTATAGTGTTT+TGG 0.292421 8:-11610964 MsG0880042626.01.T01:three_prime_UTR
AATAGTATCTCCATCTAAAA+AGG 0.294205 8:-11611079 MsG0880042626.01.T01:exon
TTAGAGGCTTTCAAGAGATT+TGG 0.301087 8:-11611244 MsG0880042626.01.T01:CDS
AGCTTAGCTCGTCCCGTTAT+TGG 0.301482 8:-11613903 MsG0880042626.01.T01:CDS
CTGCAGATGGATTAGAGATA+TGG 0.306273 8:-11611750 MsG0880042626.01.T01:CDS
AGAGAATTGAAGGTGATCTT+TGG 0.324769 8:-11611285 MsG0880042626.01.T01:CDS
ACAGGTGGATTCAAGATTCT+TGG 0.337191 8:-11614948 MsG0880042626.01.T01:CDS
TTCTGATTCACAACCATTAG+AGG 0.338910 8:-11611260 MsG0880042626.01.T01:CDS
CCACATTATCAAAAGAATTC+AGG 0.346050 8:-11613073 MsG0880042626.01.T01:intron
ACACTGGAAACCCATTGTTT+TGG 0.348473 8:+11616494 None:intergenic
TCAGAAGGCGAAGGCCGTTT+GGG 0.348638 8:+11611791 None:intergenic
ATCTAGAGGTGTGGCTCTTA+AGG 0.350357 8:-11611824 MsG0880042626.01.T01:intron
CTGTTCTTTGGTTATTGTGC+TGG 0.354337 8:+11612878 None:intergenic
TGATACCTACGGTTCAATCT+TGG 0.356398 8:-11614904 MsG0880042626.01.T01:CDS
TGCTGTATTATATAAGGATT+GGG 0.361705 8:-11612114 MsG0880042626.01.T01:CDS
ATTGTCTGCTGTATTATATA+AGG 0.364894 8:-11612120 MsG0880042626.01.T01:CDS
ATCAGAAGGCGAAGGCCGTT+TGG 0.365278 8:+11611790 None:intergenic
CTTCCAAGAGATGAATCATT+TGG 0.368825 8:-11613511 MsG0880042626.01.T01:CDS
ACACTTGCACCACCTTCATA+TGG 0.371231 8:-11611552 MsG0880042626.01.T01:CDS
TCTTGTCTATAGTAGACTAA+TGG 0.377121 8:+11614032 None:intergenic
AGTTCCTTGAACAATGGTAT+AGG 0.379627 8:+11613304 None:intergenic
TGAGTTGCAAACAAAGTTGA+TGG 0.379958 8:+11614224 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8:-11612289 MsG0880042626.01.T01:CDS
GATACCTACGGTTCAATCTT+GGG 0.388084 8:-11614903 MsG0880042626.01.T01:CDS
TGACCAAATGATTCATCTCT+TGG 0.388343 8:+11613508 None:intergenic
GGAACAATGATGAGACTCTA+AGG 0.391890 8:-11611183 MsG0880042626.01.T01:CDS
CAAGAGATTTGGAACAAAGT+TGG 0.394650 8:-11611233 MsG0880042626.01.T01:CDS
CTGCTGTATTATATAAGGAT+TGG 0.398026 8:-11612115 MsG0880042626.01.T01:CDS
ATCAAGTATGTACAATTTGT+TGG 0.404374 8:+11612694 None:intergenic
TTTAGGTGGTGGAAACTTAA+GGG 0.405519 8:+11613258 None:intergenic
GGAAAGTAAATATCACTAAC+AGG 0.406097 8:+11612515 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.406902 8:+11611647 None:intergenic
TCTAATCCATCTGCAGCATA+AGG 0.407144 8:+11611757 None:intergenic
AAAGTGCAAAACAAATTTGC+TGG 0.409435 8:-11615089 MsG0880042626.01.T01:CDS
TATAATGGTCAAGTCAATTA+GGG 0.409856 8:+11611351 None:intergenic
GCTTCAACACCATCACTTGC+AGG 0.410303 8:+11612494 None:intergenic
GAAGGATAAAGCAAAGTATA+CGG 0.412453 8:+11611136 None:intergenic
GAGACTCTAAGGAATCGATA+TGG 0.416853 8:-11611172 MsG0880042626.01.T01:CDS
GTCAATCCTTCCTCACTTGA+AGG 0.416919 8:+11611118 None:intergenic
AATCTCTTGAAAGCCTCTAA+TGG 0.418384 8:+11611247 None:intergenic
CATCCTCAGGCTGATAGCTT+TGG 0.418449 8:-11612539 MsG0880042626.01.T01:CDS
AAAGTATACGGCATCTTAAC+CGG 0.420728 8:+11611148 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8:+11612290 None:intergenic
AGTTTGCTAAGTTCATTAGT+AGG 0.422127 8:+11613331 None:intergenic
AAGCTATCAGCCTGAGGATG+TGG 0.423011 8:+11612542 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.425209 8:+11612921 None:intergenic
CCACCACCTAAAATCATTCA+AGG 0.428002 8:-11613247 MsG0880042626.01.T01:intron
GATAGTGACATGGGAATTCC+AGG 0.428040 8:-11614327 MsG0880042626.01.T01:CDS
CACCAAAGAGCAAGCTAGAT+AGG 0.433954 8:-11612920 MsG0880042626.01.T01:CDS
TCAACTTTGTTTGCAACTCA+TGG 0.435514 8:-11614221 MsG0880042626.01.T01:CDS
TTCTCGTGTTCCAAAACAAT+GGG 0.437331 8:-11616504 MsG0880042626.01.T01:CDS
AAGTTGATGGTTCCATGGTT+AGG 0.438897 8:+11614237 None:intergenic
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8:-11612582 MsG0880042626.01.T01:CDS
AGAAAGTGGAAAAGGTAAAG+TGG 0.439449 8:-11614436 MsG0880042626.01.T01:CDS
TAGCCCTATACCATTGTTCA+AGG 0.440814 8:-11613308 MsG0880042626.01.T01:CDS
AGTTTATAACCTTTCTTAGC+TGG 0.442387 8:+11613831 None:intergenic
GTTCCTTGAACAATGGTATA+GGG 0.442713 8:+11613305 None:intergenic
TCTTGACAAGACCTCTATAA+TGG 0.447317 8:+11611336 None:intergenic
TGGGCCGTTCAGTGGCTCTC+AGG 0.448781 8:-11614884 MsG0880042626.01.T01:CDS
TATTGAGAAGACGTTCTTGA+TGG 0.451460 8:-11612159 MsG0880042626.01.T01:CDS
CGGCCTTCGCCTTCTGATAG+AGG 0.452513 8:-11611785 MsG0880042626.01.T01:CDS
TTCTCAATATAAAATGCTCC+TGG 0.455625 8:+11614309 None:intergenic
TTTACAAGAGAGATGATTGC+TGG 0.455862 8:-11613105 MsG0880042626.01.T01:CDS
TGTATTATTTAGATATGAGT+TGG 0.461880 8:-11616535 MsG0880042626.01.T01:CDS
CTTAGAAAGCTCATCATACT+CGG 0.462104 8:+11611420 None:intergenic
TAATAACATGACCATGGATA+GGG 0.462761 8:+11611000 None:intergenic
AAAGCTGCATTTGAAATCAA+TGG 0.475603 8:+11610890 None:intergenic
ATGACCATGGATAGGGGTTG+AGG 0.475928 8:+11611007 None:intergenic
GGAAGTAAAAGCTTATGAAT+AGG 0.477117 8:+11612248 None:intergenic
ATGGTGTTGAAGCTTCAATT+TGG 0.479485 8:-11612484 MsG0880042626.01.T01:CDS
GGACAGGTAAACGTGAAGAA+TGG 0.481824 8:-11613983 MsG0880042626.01.T01:CDS
CTGAAGACTTTACGAGGAGA+TGG 0.485246 8:-11614005 MsG0880042626.01.T01:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.486789 8:-11611637 MsG0880042626.01.T01:CDS
CACTGTCCAGCTCCTAGAAT+CGG 0.493765 8:+11614375 None:intergenic
GTGTTGGATCCTCCAATAAC+GGG 0.494877 8:+11613891 None:intergenic
GCTAAGCAGCCCACATCCTC+AGG 0.499529 8:-11612552 MsG0880042626.01.T01:CDS
TTAGCTCGTCCCGTTATTGG+AGG 0.499661 8:-11613900 MsG0880042626.01.T01:CDS
ATGTGGGCTGCTTAGCTCAA+TGG 0.499826 8:+11612559 None:intergenic
TTGAAATCAATGGTCTAGAA+TGG 0.501959 8:+11610900 None:intergenic
TTCAATCTTGGGCCGTTCAG+TGG 0.504725 8:-11614892 MsG0880042626.01.T01:CDS
CTTTATCCTTCAAGTGAGGA+AGG 0.508215 8:-11611124 MsG0880042626.01.T01:CDS
TGCCTAATGATCTACTCAAA+AGG 0.508255 8:-11612073 MsG0880042626.01.T01:intron
CTGCTTAGCTCAATGGCCAA+TGG 0.509548 8:+11612566 None:intergenic
CGAAGGCCGTTTGGGGAAGT+AGG 0.511076 8:+11611799 None:intergenic
AAATGCACGCACATCGTCAA+AGG 0.511597 8:+11613375 None:intergenic
GACAGGTAAACGTGAAGAAT+GGG 0.514304 8:-11613982 MsG0880042626.01.T01:CDS
GATATCAACGCCCTCACCGC+TGG 0.515402 8:-11614981 MsG0880042626.01.T01:CDS
CTAATCCATCTGCAGCATAA+GGG 0.518394 8:+11611758 None:intergenic
AATAAATGCAGCTGATACAA+AGG 0.518442 8:-11612639 MsG0880042626.01.T01:CDS
TACCTCGGACAGAGAATTGA+AGG 0.519761 8:-11611295 MsG0880042626.01.T01:CDS
TCCATTTCACAGAAGCCAAA+AGG 0.520125 8:-11615042 MsG0880042626.01.T01:CDS
GGTGTTGGATCCTCCAATAA+CGG 0.521313 8:+11613890 None:intergenic
AAACAAAGTTGATGGTTCCA+TGG 0.521970 8:+11614232 None:intergenic
AATTGACTTGACCATTATAG+AGG 0.522463 8:-11611347 MsG0880042626.01.T01:CDS
TATGGGCTGTTATTAAGTCA+TGG 0.522967 8:-11611732 MsG0880042626.01.T01:CDS
TGACCATGGATAGGGGTTGA+GGG 0.524941 8:+11611008 None:intergenic
AGAAGATTAATGCCTAAGAA+AGG 0.525929 8:-11611448 MsG0880042626.01.T01:CDS
GATATTTAAACCAGCGGTGA+GGG 0.525980 8:+11614971 None:intergenic
TATATTGAGAATTTCATGCT+AGG 0.525987 8:-11614297 MsG0880042626.01.T01:CDS
ATATTTGTAGAAAGTGGAAA+AGG 0.528541 8:-11614444 MsG0880042626.01.T01:intron
TCCGCACCGATTCTAGGAGC+TGG 0.530615 8:-11614381 MsG0880042626.01.T01:CDS
TGCACTTGCAAGGAGTGTCT+TGG 0.531139 8:-11612198 MsG0880042626.01.T01:CDS
ATGGGCTGTTATTAAGTCAT+GGG 0.531811 8:-11611731 MsG0880042626.01.T01:CDS
CTGAGGAGTTCCTTGAACAA+TGG 0.531953 8:+11613298 None:intergenic
GGAAAGAGATCGTTTCTTGA+AGG 0.532072 8:-11614414 MsG0880042626.01.T01:CDS
ATAATAACATGACCATGGAT+AGG 0.536860 8:+11610999 None:intergenic
TGCAGATGGATTAGAGATAT+GGG 0.538537 8:-11611749 MsG0880042626.01.T01:CDS
TCACAGAAGCCAAAAGGTGA+AGG 0.539609 8:-11615036 MsG0880042626.01.T01:CDS
AATGGAGGTGGTGTTTCACT+TGG 0.540586 8:+11614050 None:intergenic
TTTCTTAGCTGGTTTCCTGC+CGG 0.541247 8:+11613842 None:intergenic
GGACAGTGATATTGATGCAT+AGG 0.541977 8:-11615013 MsG0880042626.01.T01:CDS
GAAAGTGGAAAAGGTAAAGT+GGG 0.542323 8:-11614435 MsG0880042626.01.T01:CDS
TTAGAAAGCTCATCATACTC+GGG 0.548951 8:+11611421 None:intergenic
GCTTTCTAAGAACTATCAAA+AGG 0.551115 8:-11611407 MsG0880042626.01.T01:CDS
GACTACCCTTATGCTGCAGA+TGG 0.551288 8:-11611763 MsG0880042626.01.T01:CDS
AGCTCTATATTTGATACCTA+CGG 0.553269 8:-11614915 MsG0880042626.01.T01:CDS
AACAATCAAACAAACATACA+TGG 0.553708 8:+11610976 None:intergenic
GGCAGGAAACCAGCTAAGAA+AGG 0.554760 8:-11613840 MsG0880042626.01.T01:intron
CAACTACATAAGCTTTAGCA+AGG 0.555120 8:+11612459 None:intergenic
CACAGAAGCCAAAAGGTGAA+GGG 0.557115 8:-11615035 MsG0880042626.01.T01:CDS
TGCTGAAGCAATCCATATGA+AGG 0.557661 8:+11611540 None:intergenic
AGCTTCAACAAAACATGGGT+GGG 0.558582 8:-11612857 MsG0880042626.01.T01:CDS
TTTCTTGTTATCTAGAGGTG+TGG 0.558961 8:-11611833 MsG0880042626.01.T01:intron
AAGGAACTCCTCAGAACTGA+TGG 0.562150 8:-11613289 MsG0880042626.01.T01:CDS
GTAAGTGCAGATGTTAATGT+AGG 0.562293 8:+11613427 None:intergenic
AGAACAGCTTCAACAAAACA+TGG 0.564781 8:-11612862 MsG0880042626.01.T01:CDS
TCGTCAAAGGTGTTAAACTC+TGG 0.564789 8:+11613388 None:intergenic
ACCGCTGGTTTAAATATCAC+AGG 0.565086 8:-11614966 MsG0880042626.01.T01:CDS
CACCTTGCCTTACCCTCGAA+GGG 0.565890 8:-11613871 MsG0880042626.01.T01:CDS
ATTGAGAAGACGTTCTTGAT+GGG 0.569095 8:-11612158 MsG0880042626.01.T01:CDS
AAGGATCCTACTTCCCCAAA+CGG 0.572316 8:-11611805 MsG0880042626.01.T01:CDS
AGCTATCAGCCTGAGGATGT+GGG 0.574193 8:+11612543 None:intergenic
TTTCTCGTGTTCCAAAACAA+TGG 0.579055 8:-11616505 MsG0880042626.01.T01:CDS
TGAAGACTTTACGAGGAGAT+GGG 0.579763 8:-11614004 MsG0880042626.01.T01:CDS
ATTTACTTTCCTGCAAGTGA+TGG 0.583346 8:-11612503 MsG0880042626.01.T01:CDS
GAAAAGTGAATCAATCTGGA+TGG 0.587432 8:-11613143 MsG0880042626.01.T01:intron
ATTGATGCATAGGAATGTGT+TGG 0.588062 8:-11615003 MsG0880042626.01.T01:CDS
ACACCTTGCCTTACCCTCGA+AGG 0.589170 8:-11613872 MsG0880042626.01.T01:CDS
AAGCTAGATAGGCAACTCTA+CGG 0.589256 8:-11612909 MsG0880042626.01.T01:CDS
CTATGAATAACATACGAAGA+AGG 0.592875 8:-11611040 MsG0880042626.01.T01:three_prime_UTR
TCTAAGGAATCGATATGGAC+CGG 0.593095 8:-11611167 MsG0880042626.01.T01:CDS
AAAACAATGGGTTTCCAGTG+TGG 0.593172 8:-11616492 MsG0880042626.01.T01:CDS
TCGAGGGTAAGGCAAGGTGT+TGG 0.593510 8:+11613875 None:intergenic
TTAGGTGGTGGAAACTTAAG+GGG 0.594767 8:+11613259 None:intergenic
CTATAGTAGACTAATGGAGG+TGG 0.595301 8:+11614038 None:intergenic
CTTGAAGATATTCCTAACCA+TGG 0.597036 8:-11614249 MsG0880042626.01.T01:CDS
GAGGAAGGATTGACTTGCAG+AGG 0.599561 8:-11611109 MsG0880042626.01.T01:CDS
TAGAAAGCTCATCATACTCG+GGG 0.602660 8:+11611422 None:intergenic
CACCTTCAATTCTCTGTCCG+AGG 0.602919 8:+11611293 None:intergenic
CAGAAGGCGAAGGCCGTTTG+GGG 0.605289 8:+11611792 None:intergenic
AGCTCCTAGAATCGGTGCGG+AGG 0.607434 8:+11614383 None:intergenic
GATATGGATATATTGAGTCA+TGG 0.608683 8:+11612669 None:intergenic
TTTCAATGGGATAGTGACAT+GGG 0.609030 8:-11614336 MsG0880042626.01.T01:CDS
ATTCCCTCAACCCCTATCCA+TGG 0.611269 8:-11611011 MsG0880042626.01.T01:three_prime_UTR
ACTTTACGAGGAGATGGGAC+AGG 0.611272 8:-11613999 MsG0880042626.01.T01:CDS
CATGGATAATAACATGACCA+TGG 0.612525 8:+11610994 None:intergenic
TACTGTGTTAGAAACCACAC+TGG 0.615417 8:+11616478 None:intergenic
AACAAATAGGCATCTTAGTG+TGG 0.616014 8:-11612276 MsG0880042626.01.T01:CDS
TTCATTGTGTCACGATAGTG+CGG 0.616157 8:+11612227 None:intergenic
ATTAGTGCTACTAGTGCTGA+TGG 0.617007 8:-11614858 MsG0880042626.01.T01:intron
AAGGGTAGTCCTCTATCAGA+AGG 0.619758 8:+11611776 None:intergenic
AATAACATGACCATGGATAG+GGG 0.620015 8:+11611001 None:intergenic
ACAGAAGCCAAAAGGTGAAG+GGG 0.621182 8:-11615034 MsG0880042626.01.T01:CDS
CAGCTTCAACAAAACATGGG+TGG 0.621253 8:-11612858 MsG0880042626.01.T01:CDS
ACTCAATATATCCATATCTG+AGG 0.622340 8:-11612664 MsG0880042626.01.T01:CDS
ACCTGTGATATTTAAACCAG+CGG 0.625148 8:+11614965 None:intergenic
GAGTGTCTTGGTAAATGCAG+AGG 0.628961 8:-11612186 MsG0880042626.01.T01:CDS
GTGCTTCACCATCAGTTCTG+AGG 0.630572 8:+11613281 None:intergenic
TTATTCATAGAATTACTACA+AGG 0.633858 8:+11611053 None:intergenic
TGATATTTAAACCAGCGGTG+AGG 0.636637 8:+11614970 None:intergenic
TGTCTATAGTAGACTAATGG+AGG 0.637445 8:+11614035 None:intergenic
ACGGCCCAAGATTGAACCGT+AGG 0.637844 8:+11614899 None:intergenic
TGAACATTAATGCACTTGCA+AGG 0.638089 8:-11612208 MsG0880042626.01.T01:CDS
CAGATCCTAAAAGTGAGAGA+CGG 0.638615 8:-11613549 MsG0880042626.01.T01:CDS
AGTGTCTTGGTAAATGCAGA+GGG 0.642136 8:-11612185 MsG0880042626.01.T01:CDS
GTAAACGTGAAGAATGGGAA+AGG 0.646192 8:-11613977 MsG0880042626.01.T01:CDS
TTTGCTTTATCCTTCAAGTG+AGG 0.646310 8:-11611128 MsG0880042626.01.T01:CDS
CTATGATGTCTACAATGATG+TGG 0.649661 8:-11613946 MsG0880042626.01.T01:CDS
GCTGGTTTAAATATCACAGG+TGG 0.653722 8:-11614963 MsG0880042626.01.T01:CDS
TTAAGAATGTAACCTCCGTA+CGG 0.656295 8:+11611487 None:intergenic
ACCTTGCCTTACCCTCGAAG+GGG 0.659200 8:-11613870 MsG0880042626.01.T01:CDS
GCTTCTGATGAACAATACCT+CGG 0.660873 8:-11611310 MsG0880042626.01.T01:CDS
TCAACCTGAGAGCCACTGAA+CGG 0.665209 8:+11614880 None:intergenic
TTTGGACAATATCCGTACGG+AGG 0.665441 8:-11611499 MsG0880042626.01.T01:CDS
GAACTTGTAGAGGTTGGTCA+CGG 0.669529 8:-11611631 MsG0880042626.01.T01:CDS
AGTCCTCTATCAGAAGGCGA+AGG 0.676314 8:+11611782 None:intergenic
TATGATGTCTACAATGATGT+GGG 0.681464 8:-11613945 MsG0880042626.01.T01:CDS
CCTTGCCTTACCCTCGAAGG+GGG 0.681885 8:-11613869 MsG0880042626.01.T01:CDS
TCCAGCTCCTAGAATCGGTG+CGG 0.683704 8:+11614380 None:intergenic
GAACAGCTTCAACAAAACAT+GGG 0.695205 8:-11612861 MsG0880042626.01.T01:CDS
GGACCAAAGCTATCAGCCTG+AGG 0.704451 8:+11612536 None:intergenic
TATTCATAGAATTACTACAA+GGG 0.705695 8:+11611054 None:intergenic
GAAGAACTGAAGACTTTACG+AGG 0.717242 8:-11614011 MsG0880042626.01.T01:CDS
TGAAGCAATCCATATGAAGG+TGG 0.724392 8:+11611543 None:intergenic
AGAAAGCTCATCATACTCGG+GGG 0.733263 8:+11611423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATATTTTTTAAT+AGG - Chr8:11614651-11614670 MsG0880042626.01.T01:intron 0.0%
!! CAAAATATATTTATTATTGT+TGG + Chr8:11610952-11610971 None:intergenic 10.0%
!! TTTGATATCAATATTATAAA+CGG + Chr8:11615493-11615512 None:intergenic 10.0%
!! AAATATATCAAGCAATAATA+AGG + Chr8:11614423-11614442 None:intergenic 15.0%
!! GAATTATTAGAATAATATAG+TGG + Chr8:11611604-11611623 None:intergenic 15.0%
!! TATTATTCTAATAATTCTAC+CGG - Chr8:11611607-11611626 MsG0880042626.01.T01:CDS 15.0%
!!! ACTAATCATTGTTTTTTTTA+GGG + Chr8:11611186-11611205 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - Chr8:11613592-11613611 MsG0880042626.01.T01:intron 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + Chr8:11614366-11614385 None:intergenic 15.0%
!!! TAACAAACTTTTTAAGTTTA+AGG + Chr8:11616522-11616541 None:intergenic 15.0%
!! AATTATACAACTAGTAGAAT+TGG + Chr8:11611924-11611943 None:intergenic 20.0%
!! ACATCAAATATATAAACATG+TGG - Chr8:11612717-11612736 MsG0880042626.01.T01:intron 20.0%
!! AGGTTAACAATTAAAAAACT+AGG + Chr8:11614403-11614422 None:intergenic 20.0%
!! ATTATACAACTAGTAGAATT+GGG + Chr8:11611923-11611942 None:intergenic 20.0%
!! ATTATTCTAATAATTCTACC+GGG - Chr8:11611608-11611627 MsG0880042626.01.T01:CDS 20.0%
!! GATATTAATGTATAACTCAA+TGG + Chr8:11615028-11615047 None:intergenic 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + Chr8:11614392-11614411 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - Chr8:11615356-11615375 MsG0880042626.01.T01:intron 20.0%
!! TATTCATAGAATTACTACAA+GGG + Chr8:11616326-11616345 None:intergenic 20.0%
!! TGTATTATTTAGATATGAGT+TGG - Chr8:11610842-11610861 MsG0880042626.01.T01:three_prime_UTR 20.0%
!! TTATTCATAGAATTACTACA+AGG + Chr8:11616327-11616346 None:intergenic 20.0%
!! TTGCTTGATATATTTAATGT+AGG - Chr8:11614428-11614447 MsG0880042626.01.T01:CDS 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - Chr8:11613028-11613047 MsG0880042626.01.T01:intron 20.0%
!!! ATTAAGTTATCCTTTTCTAT+TGG - Chr8:11611799-11611818 MsG0880042626.01.T01:CDS 20.0%
!!! ATTAATCTTCTACTTTTAGT+TGG + Chr8:11615920-11615939 None:intergenic 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - Chr8:11614169-11614188 MsG0880042626.01.T01:intron 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + Chr8:11613225-11613244 None:intergenic 20.0%
!!! CACTAATCATTGTTTTTTTT+AGG + Chr8:11611187-11611206 None:intergenic 20.0%
!!! CTAATCATTGTTTTTTTTAG+GGG + Chr8:11611185-11611204 None:intergenic 20.0%
!!! CTCTTTTGAACATTAATTAA+TGG + Chr8:11611377-11611396 None:intergenic 20.0%
!!! GTAAATTTTTATGTACCTTA+GGG + Chr8:11611901-11611920 None:intergenic 20.0%
!!! TACTTAATAGTGTCAAATTT+TGG + Chr8:11613285-11613304 None:intergenic 20.0%
!!! TAGAATTGTTTTTCATTTGT+AGG + Chr8:11612080-11612099 None:intergenic 20.0%
!!! TCATATTTTAAACTCACAAT+TGG - Chr8:11612678-11612697 MsG0880042626.01.T01:CDS 20.0%
!!! TTATGATGGCATTATTTTTT+TGG - Chr8:11613707-11613726 MsG0880042626.01.T01:intron 20.0%
!!! TTTGCCTAAAAAGTATATAT+CGG - Chr8:11611746-11611765 MsG0880042626.01.T01:CDS 20.0%
! AACAATCAAACAAACATACA+TGG + Chr8:11616404-11616423 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - Chr8:11616298-11616317 MsG0880042626.01.T01:intron 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - Chr8:11612933-11612952 MsG0880042626.01.T01:intron 25.0%
! ATCAAGTATGTACAATTTGT+TGG + Chr8:11614686-11614705 None:intergenic 25.0%
! ATTGTCTGCTGTATTATATA+AGG - Chr8:11615257-11615276 MsG0880042626.01.T01:intron 25.0%
! GGACTATATATCTTATGTTT+CGG + Chr8:11611992-11612011 None:intergenic 25.0%
! GTCAATTGAATTTATACCAA+TGG + Chr8:11614975-11614994 None:intergenic 25.0%
! TAACTACTGAATATATGTCT+AGG + Chr8:11615351-11615370 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + Chr8:11616029-11616048 None:intergenic 25.0%
! TATATTGAGAATTTCATGCT+AGG - Chr8:11613080-11613099 MsG0880042626.01.T01:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - Chr8:11615263-11615282 MsG0880042626.01.T01:intron 25.0%
! TGTTAATCAACTAAACTCAT+GGG + Chr8:11611149-11611168 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - Chr8:11615040-11615059 MsG0880042626.01.T01:CDS 25.0%
! TTGTTAATCAACTAAACTCA+TGG + Chr8:11611150-11611169 None:intergenic 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + Chr8:11615476-11615495 None:intergenic 25.0%
!! AATGTTTTCATCACTAGTAT+AGG - Chr8:11613679-11613698 MsG0880042626.01.T01:intron 25.0%
!! ATATTGATTGATTGGATGAA+GGG + Chr8:11611671-11611690 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + Chr8:11614779-11614798 None:intergenic 25.0%
!! ATGACATGATATTGATTGAT+TGG + Chr8:11611679-11611698 None:intergenic 25.0%
!! ATGTTTTCATCACTAGTATA+GGG - Chr8:11613680-11613699 MsG0880042626.01.T01:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - Chr8:11613027-11613046 MsG0880042626.01.T01:intron 25.0%
!! CTAAAAAGTATATATCGGAA+GGG - Chr8:11611751-11611770 MsG0880042626.01.T01:CDS 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + Chr8:11614159-11614178 None:intergenic 25.0%
!! GGTAAATTTTTATGTACCTT+AGG + Chr8:11611902-11611921 None:intergenic 25.0%
!! GTTTGATTGTTATAGTGTTT+TGG - Chr8:11616413-11616432 MsG0880042626.01.T01:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + Chr8:11614783-11614802 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - Chr8:11614778-11614797 MsG0880042626.01.T01:intron 25.0%
!! TTTTAATGCCTAAACATCAA+TGG - Chr8:11615425-11615444 MsG0880042626.01.T01:intron 25.0%
!! TTTTAGATGGAGATACTATT+AGG + Chr8:11616298-11616317 None:intergenic 25.0%
!!! CTGAATTCTTTTGATAATGT+GGG + Chr8:11614306-11614325 None:intergenic 25.0%
!!! TGAATTCTTTTGATAATGTG+GGG + Chr8:11614305-11614324 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - Chr8:11614230-11614249 MsG0880042626.01.T01:CDS 25.0%
AAAGTGCAAAACAAATTTGC+TGG - Chr8:11612288-11612307 MsG0880042626.01.T01:CDS 30.0%
AACCATCAATGTAACTAATG+AGG + Chr8:11612134-11612153 None:intergenic 30.0%
AATAAATGCAGCTGATACAA+AGG - Chr8:11614738-11614757 MsG0880042626.01.T01:intron 30.0%
AATGAAGAATGCCATGAAAT+GGG - Chr8:11611063-11611082 MsG0880042626.01.T01:three_prime_UTR 30.0%
ACCATCAATGTAACTAATGA+GGG + Chr8:11612133-11612152 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - Chr8:11614713-11614732 MsG0880042626.01.T01:intron 30.0%
AGAAGATTAATGCCTAAGAA+AGG - Chr8:11615929-11615948 MsG0880042626.01.T01:intron 30.0%
AGCTCTATATTTGATACCTA+CGG - Chr8:11612462-11612481 MsG0880042626.01.T01:CDS 30.0%
AGTTTATAACCTTTCTTAGC+TGG + Chr8:11613549-11613568 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + Chr8:11616381-11616400 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - Chr8:11612005-11612024 MsG0880042626.01.T01:intron 30.0%
ATATAGTGGTCATTTGAACA+TGG + Chr8:11611590-11611609 None:intergenic 30.0%
ATTCTATTGTCCTAACATCA+TGG + Chr8:11611223-11611242 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - Chr8:11615088-11615107 MsG0880042626.01.T01:CDS 30.0%
CCACATTATCAAAAGAATTC+AGG - Chr8:11614304-11614323 MsG0880042626.01.T01:CDS 30.0%
CTATAATGGTCAAGTCAATT+AGG + Chr8:11616030-11616049 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - Chr8:11616337-11616356 MsG0880042626.01.T01:intron 30.0%
CTGCTGTATTATATAAGGAT+TGG - Chr8:11615262-11615281 MsG0880042626.01.T01:intron 30.0%
GAAGGATAAAGCAAAGTATA+CGG + Chr8:11616244-11616263 None:intergenic 30.0%
GAATAGGATAGGATTAGAAA+TGG - Chr8:11611775-11611794 MsG0880042626.01.T01:CDS 30.0%
GATATGGATATATTGAGTCA+TGG + Chr8:11614711-11614730 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + Chr8:11614865-11614884 None:intergenic 30.0%
GGAAGTAAAAGCTTATGAAT+AGG + Chr8:11615132-11615151 None:intergenic 30.0%
TAATAACATGACCATGGATA+GGG + Chr8:11616380-11616399 None:intergenic 30.0%
TAGTATAGGGTATGTTATGA+TGG - Chr8:11613693-11613712 MsG0880042626.01.T01:intron 30.0%
TAGTCCAAACTCTTACTTTA+GGG - Chr8:11612006-11612025 MsG0880042626.01.T01:intron 30.0%
TATCTTATGTTTCGGTTCAA+CGG + Chr8:11611984-11612003 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - Chr8:11613432-11613451 MsG0880042626.01.T01:CDS 30.0%
TATTATTGTTGGTCCTAAGA+CGG + Chr8:11610941-11610960 None:intergenic 30.0%
TATTGACATTAAACCGTCTT+AGG - Chr8:11610925-11610944 MsG0880042626.01.T01:three_prime_UTR 30.0%
TCTTGTCTATAGTAGACTAA+TGG + Chr8:11613348-11613367 None:intergenic 30.0%
TGATCTTGAATACAAACATG+TGG - Chr8:11610988-11611007 MsG0880042626.01.T01:three_prime_UTR 30.0%
TGTGACATATTTGTAGAAAG+TGG - Chr8:11612927-11612946 MsG0880042626.01.T01:CDS 30.0%
TTCTCAATATAAAATGCTCC+TGG + Chr8:11613071-11613090 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + Chr8:11616480-11616499 None:intergenic 30.0%
TTGAACAAAAACTCACTCAA+AGG - Chr8:11616173-11616192 MsG0880042626.01.T01:intron 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + Chr8:11616490-11616509 None:intergenic 30.0%
! AATTTTGGACAATATCCGTA+CGG - Chr8:11615875-11615894 MsG0880042626.01.T01:intron 30.0%
! ATACCTTGAATGATTTTAGG+TGG + Chr8:11614136-11614155 None:intergenic 30.0%
! ATATAGTAAGTGTTGCAAGT+GGG + Chr8:11612187-11612206 None:intergenic 30.0%
! ATTCCTTTCTTGTTATCTAG+AGG - Chr8:11615539-11615558 MsG0880042626.01.T01:intron 30.0%
! ATTTTGTAAGCCATGATGTT+AGG - Chr8:11611210-11611229 MsG0880042626.01.T01:CDS 30.0%
! CCTAAAAAGTATATATCGGA+AGG - Chr8:11611750-11611769 MsG0880042626.01.T01:CDS 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + Chr8:11615333-11615352 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + Chr8:11615090-11615109 None:intergenic 30.0%
! GATATTGATTGATTGGATGA+AGG + Chr8:11611672-11611691 None:intergenic 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - Chr8:11615970-11615989 MsG0880042626.01.T01:intron 30.0%
! TACAAACATGTGGATTTGTT+TGG - Chr8:11610998-11611017 MsG0880042626.01.T01:three_prime_UTR 30.0%
! TATATAGTAAGTGTTGCAAG+TGG + Chr8:11612188-11612207 None:intergenic 30.0%
! TGGATACCTTGAATGATTTT+AGG + Chr8:11614139-11614158 None:intergenic 30.0%
! TGTGGATTTGTTTGGAAAAA+TGG - Chr8:11611006-11611025 MsG0880042626.01.T01:three_prime_UTR 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - Chr8:11613608-11613627 MsG0880042626.01.T01:intron 30.0%
! TTTTCATTTGTAGGCCTAAA+GGG + Chr8:11612071-11612090 None:intergenic 30.0%
! TTTTTCATTTGTAGGCCTAA+AGG + Chr8:11612072-11612091 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - Chr8:11616030-11616049 MsG0880042626.01.T01:intron 30.0%
!! AGTTTGCTAAGTTCATTAGT+AGG + Chr8:11614049-11614068 None:intergenic 30.0%
!! ATCTTCTACTTTTAGTTGGT+CGG + Chr8:11615916-11615935 None:intergenic 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - Chr8:11615736-11615755 MsG0880042626.01.T01:intron 30.0%
!! CCTTCCGATATATACTTTTT+AGG + Chr8:11611753-11611772 None:intergenic 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + Chr8:11614727-11614746 None:intergenic 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + Chr8:11615309-11615328 None:intergenic 30.0%
!!! CAAATTTGTTTTGCACTTTC+TGG + Chr8:11612287-11612306 None:intergenic 30.0%
!!! CCTGAATTCTTTTGATAATG+TGG + Chr8:11614307-11614326 None:intergenic 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + Chr8:11616016-11616035 None:intergenic 30.0%
AAAGTATACGGCATCTTAAC+CGG + Chr8:11616232-11616251 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - Chr8:11615101-11615120 MsG0880042626.01.T01:intron 35.0%
AATAACATGACCATGGATAG+GGG + Chr8:11616379-11616398 None:intergenic 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + Chr8:11616133-11616152 None:intergenic 35.0%
ACACCTCTAGATAACAAGAA+AGG + Chr8:11615545-11615564 None:intergenic 35.0%
ACCCTCATTAGTTACATTGA+TGG - Chr8:11612129-11612148 MsG0880042626.01.T01:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + Chr8:11612415-11612434 None:intergenic 35.0%
ACGGAAGAGCTTATTGTTTA+AGG + Chr8:11611965-11611984 None:intergenic 35.0%
ACTTGAAAAATGCAACATGG+TGG - Chr8:11615771-11615790 MsG0880042626.01.T01:intron 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - Chr8:11612941-11612960 MsG0880042626.01.T01:intron 35.0%
AGAACAGCTTCAACAAAACA+TGG - Chr8:11614515-11614534 MsG0880042626.01.T01:intron 35.0%
AGAGAATTGAAGGTGATCTT+TGG - Chr8:11616092-11616111 MsG0880042626.01.T01:intron 35.0%
AGTTCCTTGAACAATGGTAT+AGG + Chr8:11614076-11614095 None:intergenic 35.0%
ATCAATGTAACTAATGAGGG+TGG + Chr8:11612130-11612149 None:intergenic 35.0%
ATGAAGAATGCCATGAAATG+GGG - Chr8:11611064-11611083 MsG0880042626.01.T01:three_prime_UTR 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - Chr8:11615219-11615238 MsG0880042626.01.T01:intron 35.0%
ATTGATGCATAGGAATGTGT+TGG - Chr8:11612374-11612393 MsG0880042626.01.T01:intron 35.0%
ATTTACTTTCCTGCAAGTGA+TGG - Chr8:11614874-11614893 MsG0880042626.01.T01:CDS 35.0%
CAACTAAACTCATGGGTAAT+GGG + Chr8:11611142-11611161 None:intergenic 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + Chr8:11615733-11615752 None:intergenic 35.0%
CAATGAAGAATGCCATGAAA+TGG - Chr8:11611062-11611081 MsG0880042626.01.T01:three_prime_UTR 35.0%
CATAGATACCATTATGTTCC+CGG + Chr8:11611629-11611648 None:intergenic 35.0%
CATGATAGGAAGACATGATA+TGG + Chr8:11611865-11611884 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + Chr8:11616386-11616405 None:intergenic 35.0%
CTATGATGTCTACAATGATG+TGG - Chr8:11613431-11613450 MsG0880042626.01.T01:CDS 35.0%
CTTAGAAAGCTCATCATACT+CGG + Chr8:11615960-11615979 None:intergenic 35.0%
CTTCCAAGAGATGAATCATT+TGG - Chr8:11613866-11613885 MsG0880042626.01.T01:CDS 35.0%
CTTGAAAAATGCAACATGGT+GGG - Chr8:11615772-11615791 MsG0880042626.01.T01:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - Chr8:11613128-11613147 MsG0880042626.01.T01:CDS 35.0%
GAAAAGTGAATCAATCTGGA+TGG - Chr8:11614234-11614253 MsG0880042626.01.T01:CDS 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - Chr8:11612942-11612961 MsG0880042626.01.T01:intron 35.0%
GAACAGCTTCAACAAAACAT+GGG - Chr8:11614516-11614535 MsG0880042626.01.T01:intron 35.0%
GAATATCCCATCTTAGATTG+AGG + Chr8:11615401-11615420 None:intergenic 35.0%
GCAAATGAAAGAAAACTTCG+TGG + Chr8:11612265-11612284 None:intergenic 35.0%
GGCACATCTAAATAAACATG+TGG - Chr8:11611027-11611046 MsG0880042626.01.T01:three_prime_UTR 35.0%
GTAAGTGCAGATGTTAATGT+AGG + Chr8:11613953-11613972 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - Chr8:11615768-11615787 MsG0880042626.01.T01:intron 35.0%
GTTATGAGTATACATCCATG+TGG + Chr8:11612580-11612599 None:intergenic 35.0%
GTTCCTTGAACAATGGTATA+GGG + Chr8:11614075-11614094 None:intergenic 35.0%
TAAACATAATGCTCACCACA+TGG - Chr8:11612562-11612581 MsG0880042626.01.T01:CDS 35.0%
TAATTCTACCGGGAACATAA+TGG - Chr8:11611618-11611637 MsG0880042626.01.T01:CDS 35.0%
TATATATCGGAAGGGTGAAT+AGG - Chr8:11611759-11611778 MsG0880042626.01.T01:CDS 35.0%
TATTGAGAAGACGTTCTTGA+TGG - Chr8:11615218-11615237 MsG0880042626.01.T01:intron 35.0%
TCAACTAAACTCATGGGTAA+TGG + Chr8:11611143-11611162 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + Chr8:11616044-11616063 None:intergenic 35.0%
TGAACATTAATGCACTTGCA+AGG - Chr8:11615169-11615188 MsG0880042626.01.T01:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + Chr8:11613872-11613891 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + Chr8:11613156-11613175 None:intergenic 35.0%
TGCCTAATGATCTACTCAAA+AGG - Chr8:11615304-11615323 MsG0880042626.01.T01:intron 35.0%
TGTCTATAGTAGACTAATGG+AGG + Chr8:11613345-11613364 None:intergenic 35.0%
TTAAGAATGTAACCTCCGTA+CGG + Chr8:11615893-11615912 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + Chr8:11615959-11615978 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - Chr8:11616133-11616152 MsG0880042626.01.T01:intron 35.0%
TTCTCGTGTTCCAAAACAAT+GGG - Chr8:11610873-11610892 MsG0880042626.01.T01:three_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - Chr8:11616117-11616136 MsG0880042626.01.T01:intron 35.0%
TTTACAAGAGAGATGATTGC+TGG - Chr8:11614272-11614291 MsG0880042626.01.T01:CDS 35.0%
TTTCAATGGGATAGTGACAT+GGG - Chr8:11613041-11613060 MsG0880042626.01.T01:intron 35.0%
TTTCATTTGTAGGCCTAAAG+GGG + Chr8:11612070-11612089 None:intergenic 35.0%
TTTCTCGTGTTCCAAAACAA+TGG - Chr8:11610872-11610891 MsG0880042626.01.T01:three_prime_UTR 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - Chr8:11616249-11616268 MsG0880042626.01.T01:intron 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - Chr8:11615646-11615665 MsG0880042626.01.T01:intron 35.0%
! ATGGTGTTGAAGCTTCAATT+TGG - Chr8:11614893-11614912 MsG0880042626.01.T01:CDS 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - Chr8:11615720-11615739 MsG0880042626.01.T01:intron 35.0%
! CAACTACATAAGCTTTAGCA+AGG + Chr8:11614921-11614940 None:intergenic 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - Chr8:11616144-11616163 MsG0880042626.01.T01:intron 35.0%
! CAATCTAAGATGGGATATTC+AGG - Chr8:11615401-11615420 MsG0880042626.01.T01:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - Chr8:11615860-11615879 MsG0880042626.01.T01:intron 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + Chr8:11616311-11616330 None:intergenic 35.0%
! TATAGTAAGTGTTGCAAGTG+GGG + Chr8:11612186-11612205 None:intergenic 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - Chr8:11615645-11615664 MsG0880042626.01.T01:intron 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - Chr8:11613156-11613175 MsG0880042626.01.T01:intron 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - Chr8:11615544-11615563 MsG0880042626.01.T01:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - Chr8:11613040-11613059 MsG0880042626.01.T01:intron 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + Chr8:11613148-11613167 None:intergenic 35.0%
!! GTTTTGTTGAAGCTGTTCTT+TGG + Chr8:11614514-11614533 None:intergenic 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - Chr8:11615628-11615647 MsG0880042626.01.T01:intron 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + Chr8:11614122-11614141 None:intergenic 35.0%
!!! TTTTAGGTGGTGGAAACTTA+AGG + Chr8:11614123-11614142 None:intergenic 35.0%
AAGCTAGATAGGCAACTCTA+CGG - Chr8:11614468-11614487 MsG0880042626.01.T01:intron 40.0%
AGCTTCAACAAAACATGGGT+GGG - Chr8:11614520-11614539 MsG0880042626.01.T01:intron 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - Chr8:11615192-11615211 MsG0880042626.01.T01:intron 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - Chr8:11613828-11613847 MsG0880042626.01.T01:intron 40.0%
CCACCACCTAAAATCATTCA+AGG - Chr8:11614130-11614149 MsG0880042626.01.T01:intron 40.0%
CTAATCCATCTGCAGCATAA+GGG + Chr8:11615622-11615641 None:intergenic 40.0%
CTATAGTAGACTAATGGAGG+TGG + Chr8:11613342-11613361 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG - Chr8:11611460-11611479 MsG0880042626.01.T01:CDS 40.0%
CTGCACAAAGGAAAGTGATA+TGG - Chr8:11613620-11613639 MsG0880042626.01.T01:intron 40.0%
CTGTTCTTTGGTTATTGTGC+TGG + Chr8:11614502-11614521 None:intergenic 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - Chr8:11616253-11616272 MsG0880042626.01.T01:intron 40.0%
GAAGAACTGAAGACTTTACG+AGG - Chr8:11613366-11613385 MsG0880042626.01.T01:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - Chr8:11613395-11613414 MsG0880042626.01.T01:CDS 40.0%
GACCACAACCATTGATGTTT+AGG + Chr8:11615436-11615455 None:intergenic 40.0%
GATACCTACGGTTCAATCTT+GGG - Chr8:11612474-11612493 MsG0880042626.01.T01:CDS 40.0%
GATATTTAAACCAGCGGTGA+GGG + Chr8:11612409-11612428 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG - Chr8:11611457-11611476 MsG0880042626.01.T01:CDS 40.0%
GCTTCTGATGAACAATACCT+CGG - Chr8:11616067-11616086 MsG0880042626.01.T01:intron 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - Chr8:11612963-11612982 MsG0880042626.01.T01:intron 40.0%
GGAACAATGATGAGACTCTA+AGG - Chr8:11616194-11616213 MsG0880042626.01.T01:intron 40.0%
GGACAGTGATATTGATGCAT+AGG - Chr8:11612364-11612383 MsG0880042626.01.T01:intron 40.0%
GGCAAATAGTGCATTGTGAT+TGG + Chr8:11611449-11611468 None:intergenic 40.0%
GTAAACGTGAAGAATGGGAA+AGG - Chr8:11613400-11613419 MsG0880042626.01.T01:CDS 40.0%
TAACTGTTGTTGCGTATACG+TGG + Chr8:11611113-11611132 None:intergenic 40.0%
TACTGTGTTAGAAACCACAC+TGG + Chr8:11610902-11610921 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + Chr8:11615958-11615977 None:intergenic 40.0%
TAGCCCTATACCATTGTTCA+AGG - Chr8:11614069-11614088 MsG0880042626.01.T01:intron 40.0%
TATACCAATGGCTGATGAGT+TGG + Chr8:11614963-11614982 None:intergenic 40.0%
TCCATTTCACAGAAGCCAAA+AGG - Chr8:11612335-11612354 MsG0880042626.01.T01:intron 40.0%
TCTAAATTACCTCCCCCTTT+AGG - Chr8:11612054-11612073 MsG0880042626.01.T01:intron 40.0%
TCTAAGGAATCGATATGGAC+CGG - Chr8:11616210-11616229 MsG0880042626.01.T01:intron 40.0%
TCTAATCCATCTGCAGCATA+AGG + Chr8:11615623-11615642 None:intergenic 40.0%
TGAAGACTTTACGAGGAGAT+GGG - Chr8:11613373-11613392 MsG0880042626.01.T01:CDS 40.0%
TGAAGCAATCCATATGAAGG+TGG + Chr8:11615837-11615856 None:intergenic 40.0%
TGATACCTACGGTTCAATCT+TGG - Chr8:11612473-11612492 MsG0880042626.01.T01:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + Chr8:11612410-11612429 None:intergenic 40.0%
TGCCTAAACATCAATGGTTG+TGG - Chr8:11615431-11615450 MsG0880042626.01.T01:intron 40.0%
TGCTGAAGCAATCCATATGA+AGG + Chr8:11615840-11615859 None:intergenic 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - Chr8:11615740-11615759 MsG0880042626.01.T01:intron 40.0%
TTCATTGTGTCACGATAGTG+CGG + Chr8:11615153-11615172 None:intergenic 40.0%
TTCATTTGTAGGCCTAAAGG+GGG + Chr8:11612069-11612088 None:intergenic 40.0%
TTCCTATCATGTGCACCAAA+CGG - Chr8:11611874-11611893 MsG0880042626.01.T01:intron 40.0%
TTCGCAACCTCAATCTAAGA+TGG - Chr8:11615391-11615410 MsG0880042626.01.T01:intron 40.0%
! AAAACAATGGGTTTCCAGTG+TGG - Chr8:11610885-11610904 MsG0880042626.01.T01:three_prime_UTR 40.0%
! ACACTGGAAACCCATTGTTT+TGG + Chr8:11610886-11610905 None:intergenic 40.0%
! ACAGGTGGATTCAAGATTCT+TGG - Chr8:11612429-11612448 MsG0880042626.01.T01:intron 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - Chr8:11613208-11613227 MsG0880042626.01.T01:intron 40.0%
! ATTAGTGCTACTAGTGCTGA+TGG - Chr8:11612519-11612538 MsG0880042626.01.T01:CDS 40.0%
! GAGACTCTAAGGAATCGATA+TGG - Chr8:11616205-11616224 MsG0880042626.01.T01:intron 40.0%
! GCTGGTTTAAATATCACAGG+TGG - Chr8:11612414-11612433 MsG0880042626.01.T01:intron 40.0%
! GTTACATTGATGGTTGACCT+AGG - Chr8:11612139-11612158 MsG0880042626.01.T01:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - Chr8:11615392-11615411 MsG0880042626.01.T01:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + Chr8:11613143-11613162 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - Chr8:11612411-11612430 MsG0880042626.01.T01:intron 40.0%
!! CCTTGAATGATTTTAGGTGG+TGG + Chr8:11614133-11614152 None:intergenic 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - Chr8:11615627-11615646 MsG0880042626.01.T01:intron 40.0%
!! GTTTGGTGCACCAATAGAAA+AGG + Chr8:11611812-11611831 None:intergenic 40.0%
!! TCGTCAAAGGTGTTAAACTC+TGG + Chr8:11613992-11614011 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - Chr8:11614795-11614814 MsG0880042626.01.T01:intron 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + Chr8:11614121-11614140 None:intergenic 40.0%
!!! ACCTTTTGGCTTCTGTGAAA+TGG + Chr8:11612339-11612358 None:intergenic 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + Chr8:11613462-11613481 None:intergenic 40.0%
!!! TTTTGGAACACGAGAAAGTC+TGG + Chr8:11610869-11610888 None:intergenic 40.0%
AAATGCACGCACATCGTCAA+AGG + Chr8:11614005-11614024 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - Chr8:11614088-11614107 MsG0880042626.01.T01:intron 45.0%
AAGGATCCTACTTCCCCAAA+CGG - Chr8:11615572-11615591 MsG0880042626.01.T01:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + Chr8:11615604-11615623 None:intergenic 45.0%
AATGGAGGTGGTGTTTCACT+TGG + Chr8:11613330-11613349 None:intergenic 45.0%
ACACTTGCACCACCTTCATA+TGG - Chr8:11615825-11615844 MsG0880042626.01.T01:intron 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - Chr8:11612343-11612362 MsG0880042626.01.T01:intron 45.0%
AGAAAGCTCATCATACTCGG+GGG + Chr8:11615957-11615976 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - Chr8:11614956-11614975 MsG0880042626.01.T01:CDS 45.0%
ATCGGAAGGGTGAATAGGAT+AGG - Chr8:11611764-11611783 MsG0880042626.01.T01:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - Chr8:11612342-11612361 MsG0880042626.01.T01:intron 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - Chr8:11614457-11614476 MsG0880042626.01.T01:intron 45.0%
CAGCTTCAACAAAACATGGG+TGG - Chr8:11614519-11614538 MsG0880042626.01.T01:intron 45.0%
CTGAAGACTTTACGAGGAGA+TGG - Chr8:11613372-11613391 MsG0880042626.01.T01:CDS 45.0%
CTGAGGAGTTCCTTGAACAA+TGG + Chr8:11614082-11614101 None:intergenic 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - Chr8:11615191-11615210 MsG0880042626.01.T01:intron 45.0%
GATAGTGACATGGGAATTCC+AGG - Chr8:11613050-11613069 MsG0880042626.01.T01:intron 45.0%
GGAATCAAGGCCAAAACGTA+GGG - Chr8:11611085-11611104 MsG0880042626.01.T01:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - Chr8:11613394-11613413 MsG0880042626.01.T01:CDS 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + Chr8:11612013-11612032 None:intergenic 45.0%
GTCAATCCTTCCTCACTTGA+AGG + Chr8:11616262-11616281 None:intergenic 45.0%
GTGTTGGATCCTCCAATAAC+GGG + Chr8:11613489-11613508 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - Chr8:11616082-11616101 MsG0880042626.01.T01:intron 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - Chr8:11612341-11612360 MsG0880042626.01.T01:intron 45.0%
TCCTATCATGTGCACCAAAC+GGG - Chr8:11611875-11611894 MsG0880042626.01.T01:intron 45.0%
TCCTGATTCAATCCGCTGTT+TGG + Chr8:11611829-11611848 None:intergenic 45.0%
TCTATTGGTGCACCAAACAG+CGG - Chr8:11611814-11611833 MsG0880042626.01.T01:CDS 45.0%
TGCCATGAAATGGGGAATCA+AGG - Chr8:11611072-11611091 MsG0880042626.01.T01:exon 45.0%
TTTGGACAATATCCGTACGG+AGG - Chr8:11615878-11615897 MsG0880042626.01.T01:intron 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - Chr8:11611477-11611496 MsG0880042626.01.T01:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - Chr8:11615553-11615572 MsG0880042626.01.T01:intron 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - Chr8:11615746-11615765 MsG0880042626.01.T01:intron 45.0%
! GATGTGCGTGCATTTTACGA+GGG - Chr8:11614010-11614029 MsG0880042626.01.T01:CDS 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - Chr8:11615279-11615298 MsG0880042626.01.T01:intron 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + Chr8:11613490-11613509 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + Chr8:11613538-11613557 None:intergenic 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + Chr8:11614957-11614976 None:intergenic 45.0%
!! ACCAAACAGCGGATTGAATC+AGG - Chr8:11611825-11611844 MsG0880042626.01.T01:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + Chr8:11614459-11614478 None:intergenic 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + Chr8:11614462-11614481 None:intergenic 45.0%
!! TTAAAAAAATGTAAAAATAT+TGG + Chr8:11612034-11612053 None:intergenic 5.0%
ACTTTACGAGGAGATGGGAC+AGG - Chr8:11613378-11613397 MsG0880042626.01.T01:CDS 50.0%
AGCCACACCTCCTTGAATTG+TGG + Chr8:11611470-11611489 None:intergenic 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - Chr8:11613474-11613493 MsG0880042626.01.T01:CDS 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + Chr8:11615598-11615617 None:intergenic 50.0%
ATCCAAGACGTCAACAGCCT+AGG + Chr8:11612159-11612178 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + Chr8:11616373-11616392 None:intergenic 50.0%
ATTCCCTCAACCCCTATCCA+TGG - Chr8:11616366-11616385 MsG0880042626.01.T01:intron 50.0%
ATTTGTAGGCCTAAAGGGGG+AGG + Chr8:11612066-11612085 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + Chr8:11616087-11616106 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + Chr8:11613005-11613024 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + Chr8:11614814-11614833 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - Chr8:11615614-11615633 MsG0880042626.01.T01:intron 50.0%
GCTTCAACACCATCACTTGC+AGG + Chr8:11614886-11614905 None:intergenic 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - Chr8:11613537-11613556 MsG0880042626.01.T01:CDS 50.0%
GGCCTTGATTCCCCATTTCA+TGG + Chr8:11611077-11611096 None:intergenic 50.0%
GGGAATCAAGGCCAAAACGT+AGG - Chr8:11611084-11611103 MsG0880042626.01.T01:CDS 50.0%
GTGCTTCACCATCAGTTCTG+AGG + Chr8:11614099-11614118 None:intergenic 50.0%
TACTCGGGGGATCCTTTCTT+AGG + Chr8:11615944-11615963 None:intergenic 50.0%
TATGTACCTTAGGGCCCGTT+TGG + Chr8:11611892-11611911 None:intergenic 50.0%
TCAACCTGAGAGCCACTGAA+CGG + Chr8:11612500-11612519 None:intergenic 50.0%
TGACCATGGATAGGGGTTGA+GGG + Chr8:11616372-11616391 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - Chr8:11611465-11611484 MsG0880042626.01.T01:CDS 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - Chr8:11613477-11613496 MsG0880042626.01.T01:CDS 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - Chr8:11612485-11612504 MsG0880042626.01.T01:CDS 50.0%
! ATACGTGGTGCCCTACGTTT+TGG + Chr8:11611098-11611117 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + Chr8:11614821-11614840 None:intergenic 50.0%
! CGATGTGCGTGCATTTTACG+AGG - Chr8:11614009-11614028 MsG0880042626.01.T01:CDS 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + Chr8:11612353-11612372 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - Chr8:11616268-11616287 MsG0880042626.01.T01:intron 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + Chr8:11613836-11613855 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - Chr8:11615179-11615198 MsG0880042626.01.T01:intron 50.0%
ACACCTTGCCTTACCCTCGA+AGG - Chr8:11613505-11613524 MsG0880042626.01.T01:CDS 55.0%
ACCTTGCCTTACCCTCGAAG+GGG - Chr8:11613507-11613526 MsG0880042626.01.T01:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + Chr8:11612481-11612500 None:intergenic 55.0%
ATCAGAAGGCGAAGGCCGTT+TGG + Chr8:11615590-11615609 None:intergenic 55.0%
CACCTTGCCTTACCCTCGAA+GGG - Chr8:11613506-11613525 MsG0880042626.01.T01:CDS 55.0%
GACCTAGGCTGTTGACGTCT+TGG - Chr8:11612154-11612173 MsG0880042626.01.T01:CDS 55.0%
GGACCAAAGCTATCAGCCTG+AGG + Chr8:11614844-11614863 None:intergenic 55.0%
TCAGAAGGCGAAGGCCGTTT+GGG + Chr8:11615589-11615608 None:intergenic 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + Chr8:11613000-11613019 None:intergenic 55.0%
TCGAGGGTAAGGCAAGGTGT+TGG + Chr8:11613505-11613524 None:intergenic 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - Chr8:11614013-11614032 MsG0880042626.01.T01:CDS 55.0%
!! GCCCGTTTGGTGCACATGAT+AGG + Chr8:11611879-11611898 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - Chr8:11612990-11613009 MsG0880042626.01.T01:intron 55.0%
AGCTCCTAGAATCGGTGCGG+AGG + Chr8:11612997-11613016 None:intergenic 60.0%
CAGAAGGCGAAGGCCGTTTG+GGG + Chr8:11615588-11615607 None:intergenic 60.0%
CCTTGCCTTACCCTCGAAGG+GGG - Chr8:11613508-11613527 MsG0880042626.01.T01:CDS 60.0%
CGAAGGCCGTTTGGGGAAGT+AGG + Chr8:11615581-11615600 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - Chr8:11615592-11615611 MsG0880042626.01.T01:intron 60.0%
GATATCAACGCCCTCACCGC+TGG - Chr8:11612396-11612415 MsG0880042626.01.T01:intron 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + Chr8:11613516-11613535 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - Chr8:11613516-11613535 MsG0880042626.01.T01:CDS 60.0%
TGTGCACCAAACGGGCCCTA+AGG - Chr8:11611883-11611902 MsG0880042626.01.T01:intron 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - Chr8:11612996-11613015 MsG0880042626.01.T01:intron 60.0%
CCCCCTTCGAGGGTAAGGCA+AGG + Chr8:11613511-11613530 None:intergenic 65.0%
TGGGCCGTTCAGTGGCTCTC+AGG - Chr8:11612493-11612512 MsG0880042626.01.T01:CDS 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + Chr8:11613521-11613540 None:intergenic 65.0%
CTCGAAGGGGGAGAACCGGC+AGG - Chr8:11613520-11613539 MsG0880042626.01.T01:CDS 70.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + Chr8:11613522-11613541 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 11610841 11616558 11610841 ID=MsG0880042626.01;Name=MsG0880042626.01
Chr8 mRNA 11610841 11616558 11610841 ID=MsG0880042626.01.T01;Parent=MsG0880042626.01;Name=MsG0880042626.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0.77|0.7|0.9|1|1|10|243|890
Chr8 exon 11610841 11611840 11610841 ID=MsG0880042626.01.T01:exon:761;Parent=MsG0880042626.01.T01
Chr8 exon 11612074 11612337 11612074 ID=MsG0880042626.01.T01:exon:760;Parent=MsG0880042626.01.T01
Chr8 exon 11612449 11612726 11612449 ID=MsG0880042626.01.T01:exon:759;Parent=MsG0880042626.01.T01
Chr8 exon 11612842 11612949 11612842 ID=MsG0880042626.01.T01:exon:758;Parent=MsG0880042626.01.T01
Chr8 exon 11613074 11613159 11613074 ID=MsG0880042626.01.T01:exon:757;Parent=MsG0880042626.01.T01
Chr8 exon 11613248 11613568 11613248 ID=MsG0880042626.01.T01:exon:756;Parent=MsG0880042626.01.T01
Chr8 exon 11613841 11614081 11613841 ID=MsG0880042626.01.T01:exon:755;Parent=MsG0880042626.01.T01
Chr8 exon 11614170 11614456 11614170 ID=MsG0880042626.01.T01:exon:754;Parent=MsG0880042626.01.T01
Chr8 exon 11614859 11615111 11614859 ID=MsG0880042626.01.T01:exon:753;Parent=MsG0880042626.01.T01
Chr8 exon 11616481 11616558 11616481 ID=MsG0880042626.01.T01:exon:752;Parent=MsG0880042626.01.T01
Chr8 CDS 11616481 11616558 11616481 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11614859 11615111 11614859 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11614170 11614456 11614170 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11613841 11614081 11613841 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11613248 11613568 11613248 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11613074 11613159 11613074 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11612842 11612949 11612842 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11612449 11612726 11612449 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11612074 11612337 11612074 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 CDS 11611084 11611840 11611084 ID=MsG0880042626.01.T01:cds;Parent=MsG0880042626.01.T01
Chr8 three_prime_UTR 11610841 11611083 11610841 ID=MsG0880042626.01.T01:three_prime_utr;Parent=MsG0880042626.01.T01
Gene Sequence

>MsG0880042626.01.T01

ATGTATTATTTAGATATGAGTTGGACCAGACTTTCTCGTGTTCCAAAACAATGGGTTTCCAGTGTGGTTTCTAACACAAAAGTGCAAAACAAATTTGCTGGAGAAGTTGCAAAGATGTTTTCAAATCCATTTCACAGAAGCCAAAAGGTGAAGGGGACAGTGATATTGATGCATAGGAATGTGTTGGATATCAACGCCCTCACCGCTGGTTTAAATATCACAGGTGGATTCAAGATTCTTGGTAATCTCACTAGCTCTATATTTGATACCTACGGTTCAATCTTGGGCCGTTCAGTGGCTCTCAGGTTGATTAGTGCTACTAGTGCTGATGAAAGTGGAAAAGGTAAAGTGGGAAAGAGATCGTTTCTTGAAGGTTTTGTTACCTCCGCACCGATTCTAGGAGCTGGACAGTGTGCATACAAAGTTCATTTTCAATGGGATAGTGACATGGGAATTCCAGGAGCATTTTATATTGAGAATTTCATGCTAGGAGAATTTTTTCTTGTAAGTTTAACACTTGAAGATATTCCTAACCATGGAACCATCAACTTTGTTTGCAACTCATGGATTTACAATTGTCGAAAGTACAAAACTGAACGCATTTTCTTTGCCAACAAGACATATCTTCCAAGTGAAACACCACCTCCATTAGTCTACTATAGACAAGAAGAACTGAAGACTTTACGAGGAGATGGGACAGGTAAACGTGAAGAATGGGAAAGGATCTATGACTATGATGTCTACAATGATGTGGGTGATCCTGATAGAAAAGCTAGCTTAGCTCGTCCCGTTATTGGAGGATCCAACACCTTGCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAAGAAAGATCCTAAAAGTGAGAGACGGAGCGAGTATATTTATCTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCTTCAGACTTTCTTGTTTACATACTTAAATCAGTATCTCAGAATGTCATACCTACATTAACATCTGCACTTACATTGCAATTCAACAAGCCAGAGTTTAACACCTTTGACGATGTGCGTGCATTTTACGAGGGTGGAATTAAATTGCCTACTAATGAACTTAGCAAACTTAGCCCTATACCATTGTTCAAGGAACTCCTCAGAACTGATGGTGAAGCACCCCTTAAGTTTCCACCACCTAAAATCATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTACAAGAGAGATGATTGCTGGTGTGAATCCCCACATTATCAAAAGAATTCAGGAATTTCCACCAAAGAGCAAGCTAGATAGGCAACTCTACGGTGATAATACCAGCACAATAACCAAAGAACAGCTTCAACAAAACATGGGTGGGATCACAGTTGAACAAGCTATCGAAACCAACAAATTGTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGATACAAAGGCATATGCTACGAGAACCTTCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATATTTACTTTCCTGCAAGTGATGGTGTTGAAGCTTCAATTTGGCTCCTTGCTAAAGCTTATGTAGTTGTAAACGACTCGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAGCTTTTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTGTTATTGAGAAGACGTTCTTGATGGGAAGTTATTCTCTAGAATTGTCTGCTGTATTATATAAGGATTGGGTTTTCACTGAGCAAGGTTTGCCTAATGATCTACTCAAAAGAGGTGTGGCTCTTAAGGATCCTACTTCCCCAAACGGCCTTCGCCTTCTGATAGAGGACTACCCTTATGCTGCAGATGGATTAGAGATATGGGCTGTTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTATAAGTCAGATGTAAATATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTAGAGGTTGGTCACGGTGACTTGAAAAATGCAACATGGTGGGTTAAGATGCAAACTCGTACAGAGTTGATTGACACTTGCACCACCTTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGTTACATTCTTAACCGACCAACTAAAAGTAGAAGATTAATGCCTAAGAAAGGATCCCCCGAGTATGATGAGCTTTCTAAGAACTATCAAAAGGCGTTTTTGAGAACAATCACACCAAAAAATGACACCCTAATTGACTTGACCATTATAGAGGTCTTGTCAAGACATGCTTCTGATGAACAATACCTCGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCATTAGAGGCTTTCAAGAGATTTGGAACAAAGTTGGCTGATATTGAACAAAAACTCACTCAAAGGAACAATGATGAGACTCTAAGGAATCGATATGGACCGGTTAAGATGCCGTATACTTTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTGCAGAGGCATTCCTAATAGTATCTCCATCTAA
Protein sequence

>MsG0880042626.01.T01

MYYLDMSWTRLSRVPKQWVSSVVSNTKVQNKFAGEVAKMFSNPFHRSQKVKGTVILMHRNVLDINALTAGLNITGGFKILGNLTSSIFDTYGSILGRSVALRLISATSADESGKGKVGKRSFLEGFVTSAPILGAGQCAYKVHFQWDSDMGIPGAFYIENFMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNCRKYKTERIFFANKTYLPSETPPPLVYYRQEELKTLRGDGTGKREEWERIYDYDVYNDVGDPDRKASLARPVIGGSNTLPYPRRGRTGRKPAKKDPKSERRSEYIYLPRDESFGHLKSSDFLVYILKSVSQNVIPTLTSALTLQFNKPEFNTFDDVRAFYEGGIKLPTNELSKLSPIPLFKELLRTDGEAPLKFPPPKIIQVNQSGWMTDEEFTREMIAGVNPHIIKRIQEFPPKSKLDRQLYGDNTSTITKEQLQQNMGGITVEQAIETNKLYILDHHDSIYPYLRKINAADTKAYATRTFLFLQNDGTLKPLAIELSSPHPQADSFGPVSDIYFPASDGVEASIWLLAKAYVVVNDSLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGVIEKTFLMGSYSLELSAVLYKDWVFTEQGLPNDLLKRGVALKDPTSPNGLRLLIEDYPYAADGLEIWAVIKSWVEEYVNFYYKSDVNIAQDSELQAFWKELVEVGHGDLKNATWWVKMQTRTELIDTCTTFIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAFLRTITPKNDTLIDLTIIEVLSRHASDEQYLGQRIEGDLWTSDSQPLEAFKRFGTKLADIEQKLTQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI*