AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044393.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044393.01.T01 MTR_8g061280 96.646 328 11 0 1 328 1 328 0.0 637
MsG0880044393.01.T01 MTR_8g058790 96.646 328 11 0 1 328 1 328 0.0 637
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044393.01.T01 AT3G15180 54.062 320 147 0 7 326 5 324 6.07e-113 337
MsG0880044393.01.T01 AT3G15180 49.432 352 146 1 7 326 5 356 1.70e-107 325

Find 71 sgRNAs with CRISPR-Local

Find 621 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCTTCTTCTTGATTC+AGG 0.145985 8:+41253458 None:intergenic
AACTGCTTTCATCAATAATT+AGG 0.242205 8:+41260246 MsG0880044393.01.T01:CDS
TTTGCAGGTCACTTCCCTTC+TGG 0.285703 8:+41256285 MsG0880044393.01.T01:intron
CTTGAATCGTTGGGTCAAAT+AGG 0.290113 8:+41262392 MsG0880044393.01.T01:CDS
AGGTTATTCAAAACAAAATT+CGG 0.377036 8:+41253960 MsG0880044393.01.T01:CDS
TTGCTTGATTGCCTTATCAA+TGG 0.380041 8:+41256373 MsG0880044393.01.T01:CDS
GTATCACCTCCTTTGGTAGA+TGG 0.389521 8:-41258940 None:intergenic
TCGAGTTCGTGTATTGGCTT+TGG 0.396063 8:+41259277 MsG0880044393.01.T01:CDS
ACCAGGGTAGTTGGCGAAAT+CGG 0.401067 8:-41253557 None:intergenic
TATCTACTTACCCATTGATA+AGG 0.403257 8:-41256384 None:intergenic
TTAGGGTCGAGTTCGTGTAT+TGG 0.409795 8:+41259271 MsG0880044393.01.T01:intron
TGCTTGATTGCCTTATCAAT+GGG 0.420789 8:+41256374 MsG0880044393.01.T01:CDS
TAGCTGCTTGAAGGAGTTGT+TGG 0.422593 8:-41253534 None:intergenic
ACACAGCTCGCTCGCAGATA+TGG 0.422642 8:+41253498 MsG0880044393.01.T01:exon
TTCTCTCATTCCACAGTACA+TGG 0.435662 8:+41253986 MsG0880044393.01.T01:CDS
AAGGTCTGTATCACCTCCTT+TGG 0.437675 8:-41258947 None:intergenic
AGAAACGAAGAGGTGGCAGC+TGG 0.443137 8:+41258739 MsG0880044393.01.T01:intron
CGAAATCGGTAGCTGCTTGA+AGG 0.448609 8:-41253543 None:intergenic
AGCTGCTTGAAGGAGTTGTT+GGG 0.449722 8:-41253533 None:intergenic
TGAAACTGCACTTGAATCGT+TGG 0.452928 8:+41262382 MsG0880044393.01.T01:CDS
TGAGGTTAGCGACGATTTCA+AGG 0.456722 8:+41260350 MsG0880044393.01.T01:intron
CGAAAACACTTAAAGTTACA+AGG 0.462832 8:-41259400 None:intergenic
TGAGGGTAGACTTCAGTCCT+TGG 0.465415 8:+41262337 MsG0880044393.01.T01:CDS
AATTGTTATTTCATCCATTG+AGG 0.467650 8:+41262319 MsG0880044393.01.T01:CDS
GTTCAGCAATTTGTTCAAGT+TGG 0.473635 8:+41254095 MsG0880044393.01.T01:intron
CTGCTTCCAACAGTGTAAGT+AGG 0.479841 8:-41259355 None:intergenic
TCAAATTCATCTTTATTTGA+AGG 0.481539 8:-41262362 None:intergenic
CTTACATGGTTCATCTATGA+AGG 0.486485 8:-41260439 None:intergenic
GGACTGAAGTCTACCCTCAA+TGG 0.487252 8:-41262333 None:intergenic
AAGTAGGTTTAAACTGCATA+TGG 0.488548 8:-41259339 None:intergenic
ATTTGTTCAAGTTGGTCTGC+AGG 0.489346 8:+41254103 MsG0880044393.01.T01:CDS
CATACTCAATTTGATGTACC+TGG 0.492707 8:+41253906 MsG0880044393.01.T01:CDS
CAAATTCATCTTTATTTGAA+GGG 0.498349 8:-41262361 None:intergenic
TCAAGAGCAATGATGATAAG+TGG 0.498760 8:+41260387 MsG0880044393.01.T01:CDS
ACTAGTGTAGTTTGTAGGCC+AGG 0.500843 8:-41253924 None:intergenic
ATCTTTATTTGAAGGGTCCA+AGG 0.502106 8:-41262354 None:intergenic
AACTTGATAATGAGTGGAAG+AGG 0.503962 8:-41253717 None:intergenic
TTGATGAAAGCAGTTGAAAG+AGG 0.509011 8:-41260238 None:intergenic
ATAAGGCAATCAAGCAAAAG+TGG 0.509511 8:-41256367 None:intergenic
AGTTCGTGTATTGGCTTTGG+TGG 0.509973 8:+41259280 MsG0880044393.01.T01:CDS
ACAGAACTAGTGTAGTTTGT+AGG 0.515735 8:-41253929 None:intergenic
GAAACTGCACTTGAATCGTT+GGG 0.520239 8:+41262383 MsG0880044393.01.T01:CDS
ATTGTTATTTCATCCATTGA+GGG 0.524808 8:+41262320 MsG0880044393.01.T01:CDS
CACTAGTTCTGTGCCTTGAA+AGG 0.527319 8:+41253940 MsG0880044393.01.T01:CDS
TTTAAACCTACTTACACTGT+TGG 0.530327 8:+41259349 MsG0880044393.01.T01:CDS
AAACCACTAACCAGGGTAGT+TGG 0.540219 8:-41253566 None:intergenic
AAACGAAGAGGTGGCAGCTG+GGG 0.541524 8:+41258741 MsG0880044393.01.T01:CDS
GAAACGAAGAGGTGGCAGCT+GGG 0.546177 8:+41258740 MsG0880044393.01.T01:intron
CTTGATTCAGGAGTCAGTGC+CGG 0.546368 8:+41253470 None:intergenic
AGCATCACAATGTTCATCAC+TGG 0.550928 8:+41258978 MsG0880044393.01.T01:CDS
ACTTGATAATGAGTGGAAGA+GGG 0.552430 8:-41253716 None:intergenic
AAGTGGAAGGCTACTATCCA+AGG 0.552961 8:+41260404 MsG0880044393.01.T01:CDS
TGAAGTAACTTGATAATGAG+TGG 0.556956 8:-41253723 None:intergenic
AATTGTCAAGATTCTCCAGA+AGG 0.559293 8:-41256300 None:intergenic
ACCGATTTCGCCAACTACCC+TGG 0.569158 8:+41253556 MsG0880044393.01.T01:CDS
AAAGGAGGTGATACAGACCT+TGG 0.570033 8:+41258949 MsG0880044393.01.T01:CDS
AAGGAGGTGATACAGACCTT+GGG 0.578352 8:+41258950 MsG0880044393.01.T01:CDS
ATCTTTCCATCTACCAAAGG+AGG 0.591623 8:+41258934 MsG0880044393.01.T01:CDS
TGCTTGAAGGAGTTGTTGGG+AGG 0.602619 8:-41253530 None:intergenic
GAGCAATGATGATAAGTGGA+AGG 0.604853 8:+41260391 MsG0880044393.01.T01:CDS
ATTGTCAAGATTCTCCAGAA+GGG 0.612890 8:-41256299 None:intergenic
ATAATCTTTCCATCTACCAA+AGG 0.634831 8:+41258931 MsG0880044393.01.T01:CDS
CAGCTAGCAGAGGTTGAGCA+TGG 0.636743 8:+41260191 MsG0880044393.01.T01:intron
GAAATGGATGCAGCTAGCAG+AGG 0.649349 8:+41260181 MsG0880044393.01.T01:intron
TCACATATGCAGAAACGAAG+AGG 0.661078 8:+41258729 MsG0880044393.01.T01:intron
ATTGTGATGCTATAATCCCA+AGG 0.661427 8:-41258966 None:intergenic
CGAGCGAGCTGTGTAAACAC+CGG 0.675628 8:-41253489 None:intergenic
GAAAACACTTAAAGTTACAA+GGG 0.679076 8:-41259399 None:intergenic
CATATGCAGAAACGAAGAGG+TGG 0.680999 8:+41258732 MsG0880044393.01.T01:intron
GCGATTGAGAAAATCTGTAG+CGG 0.683960 8:-41253691 None:intergenic
TGATGACAAACCATGTACTG+TGG 0.692128 8:-41253996 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTCAATAATTATTATTAAA+GGG + Chr8:41262240-41262259 MsG0880044393.01.T01:intron 10.0%
!! TAAATTGTAATAAGTTATTA+TGG + Chr8:41254036-41254055 MsG0880044393.01.T01:intron 10.0%
!! TAGTTCAATATAAAAAAATA+TGG + Chr8:41256625-41256644 MsG0880044393.01.T01:intron 10.0%
!! TGTTCAATAATTATTATTAA+AGG + Chr8:41262239-41262258 MsG0880044393.01.T01:intron 10.0%
!! TTATATTGAAATTGTAATTA+GGG - Chr8:41255264-41255283 None:intergenic 10.0%
!! TTTATATTGAAATTGTAATT+AGG - Chr8:41255265-41255284 None:intergenic 10.0%
!!! TCATTTTAAATTTTGAAATA+TGG - Chr8:41255384-41255403 None:intergenic 10.0%
!! AAAAGCTACTAATAAAAATA+CGG + Chr8:41255676-41255695 MsG0880044393.01.T01:intron 15.0%
!! AATATGCATACAATATAAAT+TGG - Chr8:41260141-41260160 None:intergenic 15.0%
!! ACAATTTCAATATAAAGATA+AGG + Chr8:41255269-41255288 MsG0880044393.01.T01:intron 15.0%
!! ATAGATTCTACTATTAAAAA+AGG - Chr8:41254443-41254462 None:intergenic 15.0%
!! ATATGCATACAATATAAATT+GGG - Chr8:41260140-41260159 None:intergenic 15.0%
!! ATCAAATTAGTGTTATAAAT+AGG + Chr8:41261724-41261743 MsG0880044393.01.T01:intron 15.0%
!! TACAAGGATTTAAATAAATT+TGG - Chr8:41254182-41254201 None:intergenic 15.0%
!! TAGATTCTACTATTAAAAAA+GGG - Chr8:41254442-41254461 None:intergenic 15.0%
!! TCAAATTAGTGTTATAAATA+GGG + Chr8:41261725-41261744 MsG0880044393.01.T01:intron 15.0%
!! TTTAGTAATTAGCAATAAAA+TGG + Chr8:41260720-41260739 MsG0880044393.01.T01:intron 15.0%
!! TTTATTGCTAATTACTAAAA+TGG - Chr8:41260719-41260738 None:intergenic 15.0%
!!! ATAAAGAGACAAATTTTTTA+AGG + Chr8:41254242-41254261 MsG0880044393.01.T01:intron 15.0%
!!! ATTTTATTCCTTAATCTTTA+GGG - Chr8:41261530-41261549 None:intergenic 15.0%
!!! TAAAGAGACAAATTTTTTAA+GGG + Chr8:41254243-41254262 MsG0880044393.01.T01:intron 15.0%
!!! TATATTCTAAGATATGTTTT+TGG + Chr8:41258665-41258684 MsG0880044393.01.T01:intron 15.0%
!!! TTATGCTTTTATTGTTATTA+GGG + Chr8:41253827-41253846 MsG0880044393.01.T01:intron 15.0%
!!! TTTATGCTTTTATTGTTATT+AGG + Chr8:41253826-41253845 MsG0880044393.01.T01:intron 15.0%
!!! TTTCCTTATTTTTTTAACTA+GGG + Chr8:41259636-41259655 MsG0880044393.01.T01:intron 15.0%
!! AAAATAACATGTGAATTACA+AGG - Chr8:41262064-41262083 None:intergenic 20.0%
!! AAAATACAGAAGAATCAAAA+AGG - Chr8:41257460-41257479 None:intergenic 20.0%
!! AGGAATAAAATCAACTAAAA+AGG + Chr8:41261539-41261558 MsG0880044393.01.T01:intron 20.0%
!! AGGTTATTCAAAACAAAATT+CGG + Chr8:41253960-41253979 MsG0880044393.01.T01:CDS 20.0%
!! ATAATTAGGTACTTATTATG+TGG + Chr8:41260260-41260279 MsG0880044393.01.T01:intron 20.0%
!! ATTAATTCAGCTTATCTAAT+TGG - Chr8:41256545-41256564 None:intergenic 20.0%
!! ATTACCAAGAAACTTAAATT+TGG + Chr8:41261235-41261254 MsG0880044393.01.T01:intron 20.0%
!! CAAATTAGTGTTATAAATAG+GGG + Chr8:41261726-41261745 MsG0880044393.01.T01:intron 20.0%
!! CATTACTAATTACATACATA+CGG - Chr8:41258614-41258633 None:intergenic 20.0%
!! GAATATAATATATAAACACG+AGG + Chr8:41261490-41261509 MsG0880044393.01.T01:intron 20.0%
!! GGAATAAAATCAACTAAAAA+GGG + Chr8:41261540-41261559 MsG0880044393.01.T01:intron 20.0%
!! TAAAAAGGAAGTTTAATCTT+GGG - Chr8:41254378-41254397 None:intergenic 20.0%
!! TAAAATGAAAGATCATACAA+CGG + Chr8:41255396-41255415 MsG0880044393.01.T01:intron 20.0%
!! TCAGTTAAATATTTATTTGC+CGG - Chr8:41256263-41256282 None:intergenic 20.0%
!! TCCTTAATTTCAATTATAGT+TGG - Chr8:41260951-41260970 None:intergenic 20.0%
!! TTAAAAAGGAAGTTTAATCT+TGG - Chr8:41254379-41254398 None:intergenic 20.0%
!! TTCAATATAAAGATAAGGTT+GGG + Chr8:41255274-41255293 MsG0880044393.01.T01:intron 20.0%
!! TTTATCAATAACTCTTAAGT+TGG - Chr8:41258391-41258410 None:intergenic 20.0%
!! TTTCAATATAAAGATAAGGT+TGG + Chr8:41255273-41255292 MsG0880044393.01.T01:intron 20.0%
!!! AATATTTAACTGATTTTTGC+AGG + Chr8:41256270-41256289 MsG0880044393.01.T01:intron 20.0%
!!! AATTTGATAGTTTTCTACTA+GGG - Chr8:41261712-41261731 None:intergenic 20.0%
!!! ATTGCAACTATTTATTTTGT+TGG + Chr8:41260743-41260762 MsG0880044393.01.T01:intron 20.0%
!!! ATTTGCTAAGAAGTTTAAAA+AGG - Chr8:41254393-41254412 None:intergenic 20.0%
!!! CAAATTCATCTTTATTTGAA+GGG - Chr8:41262364-41262383 None:intergenic 20.0%
!!! GATTTTATTCCTTAATCTTT+AGG - Chr8:41261531-41261550 None:intergenic 20.0%
!!! GCATTTATTTTTCTTAAATG+TGG + Chr8:41254489-41254508 MsG0880044393.01.T01:intron 20.0%
!!! GTTTCCTTATTTTTTTAACT+AGG + Chr8:41259635-41259654 MsG0880044393.01.T01:intron 20.0%
!!! TAATTTGATAGTTTTCTACT+AGG - Chr8:41261713-41261732 None:intergenic 20.0%
!!! TCAAATTCATCTTTATTTGA+AGG - Chr8:41262365-41262384 None:intergenic 20.0%
!!! TCCATTTTAATTGGAATTAT+GGG + Chr8:41260815-41260834 MsG0880044393.01.T01:intron 20.0%
!!! TTAAGAGTCAGATTTTAATT+TGG - Chr8:41255635-41255654 None:intergenic 20.0%
!!! TTGCAACTATTTATTTTGTT+GGG + Chr8:41260744-41260763 MsG0880044393.01.T01:intron 20.0%
!!! TTTCATTGATTTCATTTTTC+AGG + Chr8:41253651-41253670 MsG0880044393.01.T01:intron 20.0%
!!! TTTCTAAGTAAGAGTATTAA+AGG - Chr8:41257686-41257705 None:intergenic 20.0%
! AACAATATCAATAACAGCTA+AGG - Chr8:41261991-41262010 None:intergenic 25.0%
! AACTGCTTTCATCAATAATT+AGG + Chr8:41260246-41260265 MsG0880044393.01.T01:CDS 25.0%
! AATAATTCGTAAATTCTGTC+CGG - Chr8:41260102-41260121 None:intergenic 25.0%
! AATCGATGCAATAAAAAAGT+TGG + Chr8:41258765-41258784 MsG0880044393.01.T01:CDS 25.0%
! AATCTCAAAACTTAACCTAA+AGG - Chr8:41258348-41258367 None:intergenic 25.0%
! AATGGATGAATATTAATAGG+AGG + Chr8:41255204-41255223 MsG0880044393.01.T01:intron 25.0%
! AGATTTCACTATATTAATGC+TGG + Chr8:41256682-41256701 MsG0880044393.01.T01:intron 25.0%
! AGTTATTGTTTGTAGTTTGA+TGG - Chr8:41261165-41261184 None:intergenic 25.0%
! AGTTCATCTCAAAATATTAG+CGG - Chr8:41255506-41255525 None:intergenic 25.0%
! ATAAAAATGCAAGTCTTACA+TGG - Chr8:41260456-41260475 None:intergenic 25.0%
! ATATCTTTACAAAACCTCTA+AGG + Chr8:41255750-41255769 MsG0880044393.01.T01:intron 25.0%
! ATATGACCTATAAGATAGAA+AGG + Chr8:41261310-41261329 MsG0880044393.01.T01:intron 25.0%
! ATCTCAAAACTTAACCTAAA+GGG - Chr8:41258347-41258366 None:intergenic 25.0%
! ATGGATGAATATTAATAGGA+GGG + Chr8:41255205-41255224 MsG0880044393.01.T01:intron 25.0%
! ATGGTAAAAGGTTAAATAGT+AGG - Chr8:41259245-41259264 None:intergenic 25.0%
! ATTGACTATGCAACATAATA+TGG - Chr8:41262212-41262231 None:intergenic 25.0%
! ATTTGATCATGACATTAGAA+AGG - Chr8:41255703-41255722 None:intergenic 25.0%
! CAAATATATAGATCCTAATC+AGG - Chr8:41259665-41259684 None:intergenic 25.0%
! CGTATGTATGTAATTAGTAA+TGG + Chr8:41258612-41258631 MsG0880044393.01.T01:intron 25.0%
! CTACCCTAGTTAAAAAAATA+AGG - Chr8:41259642-41259661 None:intergenic 25.0%
! CTATAATTTCTATTCTGACT+TGG - Chr8:41254940-41254959 None:intergenic 25.0%
! CTATTCACAATGATTACAAT+AGG + Chr8:41257169-41257188 MsG0880044393.01.T01:intron 25.0%
! GAAAACACTTAAAGTTACAA+GGG - Chr8:41259402-41259421 None:intergenic 25.0%
! GAGAATGGATGAATATTAAT+AGG + Chr8:41255201-41255220 MsG0880044393.01.T01:intron 25.0%
! GATATGTTAGGATATAGAAT+AGG + Chr8:41257097-41257116 MsG0880044393.01.T01:intron 25.0%
! GCAATTATTGTAATGCAATT+AGG + Chr8:41259582-41259601 MsG0880044393.01.T01:intron 25.0%
! GCCAACTATAATTGAAATTA+AGG + Chr8:41260947-41260966 MsG0880044393.01.T01:intron 25.0%
! GTATATTTGTAACAAGCTTA+AGG + Chr8:41261596-41261615 MsG0880044393.01.T01:intron 25.0%
! TAAAGAAACAGAGAAAAAGA+AGG - Chr8:41253754-41253773 None:intergenic 25.0%
! TAACATAAAGACTATGTTGA+GGG + Chr8:41259052-41259071 MsG0880044393.01.T01:intron 25.0%
! TAAGATTAGAAACTAATCCT+AGG - Chr8:41256852-41256871 None:intergenic 25.0%
! TAATCTCCTTGTAAATATTG+TGG - Chr8:41258478-41258497 None:intergenic 25.0%
! TAGAAAGAAATAAAAACTGC+TGG + Chr8:41262092-41262111 MsG0880044393.01.T01:intron 25.0%
! TATCTTTACAAAACCTCTAA+GGG + Chr8:41255751-41255770 MsG0880044393.01.T01:intron 25.0%
! TATGACCTATAAGATAGAAA+GGG + Chr8:41261311-41261330 MsG0880044393.01.T01:intron 25.0%
! TATTAATAGGAGGGATATAT+AGG + Chr8:41255214-41255233 MsG0880044393.01.T01:intron 25.0%
! TATTATCCTTGTTGAATTCT+AGG - Chr8:41261968-41261987 None:intergenic 25.0%
! TATTGAAATTGTAATTAGGG+TGG - Chr8:41255261-41255280 None:intergenic 25.0%
! TCAATATAAAGATAAGGTTG+GGG + Chr8:41255275-41255294 MsG0880044393.01.T01:intron 25.0%
! TGAACCAGAAAAATTGAAAA+AGG + Chr8:41261429-41261448 MsG0880044393.01.T01:intron 25.0%
! TGAGATTAAAATACTATGAG+AGG + Chr8:41254908-41254927 MsG0880044393.01.T01:intron 25.0%
! TGAGTAACAAAATGTTAGTT+TGG + Chr8:41260661-41260680 MsG0880044393.01.T01:intron 25.0%
! TGCTTTCAAGAAGAATAAAT+AGG - Chr8:41255958-41255977 None:intergenic 25.0%
! TGGTCACAAGATATAAATAA+AGG - Chr8:41260699-41260718 None:intergenic 25.0%
! TTAACATAAAGACTATGTTG+AGG + Chr8:41259051-41259070 MsG0880044393.01.T01:intron 25.0%
! TTGACTATGCAACATAATAT+GGG - Chr8:41262211-41262230 None:intergenic 25.0%
! TTGTATCTTCCAACAAATAT+TGG - Chr8:41260499-41260518 None:intergenic 25.0%
!! AGTATATTAGTTTATCTCCT+AGG + Chr8:41256832-41256851 MsG0880044393.01.T01:intron 25.0%
!! CTTAATAAGCTTTGGTTTAA+GGG + Chr8:41261619-41261638 MsG0880044393.01.T01:intron 25.0%
!! GAGACAACTTTTTAATGTAA+AGG - Chr8:41260632-41260651 None:intergenic 25.0%
!! GGACATTTTACAAAAAAAAC+TGG - Chr8:41262180-41262199 None:intergenic 25.0%
!! TCTTATAGGTCATATCTTTT+AGG - Chr8:41261305-41261324 None:intergenic 25.0%
!! TGTTTTCCTTTAATTCAATG+AGG - Chr8:41255360-41255379 None:intergenic 25.0%
!! TTAAGTTTCTTGGTAATTAG+TGG - Chr8:41261232-41261251 None:intergenic 25.0%
!! TTAATAAGCTTTGGTTTAAG+GGG + Chr8:41261620-41261639 MsG0880044393.01.T01:intron 25.0%
!! TTAGATTTCTAGGAATATCA+TGG + Chr8:41257398-41257417 MsG0880044393.01.T01:intron 25.0%
!! TTGTAATTTTTACAACTGCT+TGG - Chr8:41261263-41261282 None:intergenic 25.0%
!! TTTTATCCACCAATATTTGT+TGG + Chr8:41260487-41260506 MsG0880044393.01.T01:intron 25.0%
!!! AAATCTAGGATTAGTTACAA+AGG + Chr8:41257567-41257586 MsG0880044393.01.T01:intron 25.0%
!!! AATCTAGGATTAGTTACAAA+GGG + Chr8:41257568-41257587 MsG0880044393.01.T01:intron 25.0%
!!! AATTGTTATTTCATCCATTG+AGG + Chr8:41262319-41262338 MsG0880044393.01.T01:CDS 25.0%
!!! ACTTTCATTTTTGAAATGAC+TGG + Chr8:41255068-41255087 MsG0880044393.01.T01:intron 25.0%
!!! ATTGTTATTTCATCCATTGA+GGG + Chr8:41262320-41262339 MsG0880044393.01.T01:CDS 25.0%
!!! ATTTGATAGTTTTCTACTAG+GGG - Chr8:41261711-41261730 None:intergenic 25.0%
!!! ATTTTTCCAAAAAGCATATC+AGG + Chr8:41256015-41256034 MsG0880044393.01.T01:intron 25.0%
!!! CCATTTTAATTGGAATTATG+GGG + Chr8:41260816-41260835 MsG0880044393.01.T01:intron 25.0%
!!! CTAACTAATGTTTTGAAAAC+CGG + Chr8:41260849-41260868 MsG0880044393.01.T01:intron 25.0%
!!! GGTTTTGTAAAGATATATGT+TGG - Chr8:41255746-41255765 None:intergenic 25.0%
!!! GTCCATTTTAATTGGAATTA+TGG + Chr8:41260814-41260833 MsG0880044393.01.T01:intron 25.0%
!!! GTTTGTATGTCCATTTTAAT+TGG + Chr8:41260806-41260825 MsG0880044393.01.T01:intron 25.0%
!!! TATTAGTAGCTTTTTCAGAA+TGG - Chr8:41255670-41255689 None:intergenic 25.0%
!!! TCTCTTCTATGTTTTTATGT+TGG + Chr8:41259726-41259745 MsG0880044393.01.T01:intron 25.0%
!!! TGTTTTGATCTTGTGTTTTT+TGG + Chr8:41254069-41254088 MsG0880044393.01.T01:intron 25.0%
!!! TTATGTCATGCATTTTGTTT+TGG + Chr8:41259184-41259203 MsG0880044393.01.T01:intron 25.0%
!!! TTGTTTTGAATAACCTTTCA+AGG - Chr8:41253956-41253975 None:intergenic 25.0%
!!! TTTGGCTTTAGTTTATGTTT+TGG + Chr8:41257232-41257251 MsG0880044393.01.T01:intron 25.0%
AAAAAAATATGGTCAGTACC+AGG + Chr8:41256636-41256655 MsG0880044393.01.T01:intron 30.0%
AAAACTATCTCATCATAGTG+TGG - Chr8:41255045-41255064 None:intergenic 30.0%
AAAAGATGAATTCTGCTGAT+AGG - Chr8:41259949-41259968 None:intergenic 30.0%
AAAATGATATCAGTTCGGTT+TGG - Chr8:41255577-41255596 None:intergenic 30.0%
AAAGATGAATTCTGCTGATA+GGG - Chr8:41259948-41259967 None:intergenic 30.0%
AACAGCAATCATGAAGAATA+TGG - Chr8:41258887-41258906 None:intergenic 30.0%
AACTTATATGCTCTATGTTG+AGG + Chr8:41255814-41255833 MsG0880044393.01.T01:intron 30.0%
AAGTAGGTTTAAACTGCATA+TGG - Chr8:41259342-41259361 None:intergenic 30.0%
AATGATATGCCCTATATACA+TGG + Chr8:41258525-41258544 MsG0880044393.01.T01:intron 30.0%
AATTACCAAAATGAGCCAAA+GGG + Chr8:41261117-41261136 MsG0880044393.01.T01:intron 30.0%
AATTCAATGGAACTCACATT+TGG - Chr8:41255010-41255029 None:intergenic 30.0%
ACAACAAAATACTTCTTACC+AGG - Chr8:41258807-41258826 None:intergenic 30.0%
ACCTATCCTCATTGAATTAA+AGG + Chr8:41255351-41255370 MsG0880044393.01.T01:intron 30.0%
ACTAAAACTCATGTACTTTG+AGG + Chr8:41260542-41260561 MsG0880044393.01.T01:intron 30.0%
ACTAATTACATACATACGGT+TGG - Chr8:41258610-41258629 None:intergenic 30.0%
ACTTATATGCTCTATGTTGA+GGG + Chr8:41255815-41255834 MsG0880044393.01.T01:intron 30.0%
ATAATAGGCAAGTAAAAGAG+GGG - Chr8:41260036-41260055 None:intergenic 30.0%
ATAATCTTTCCATCTACCAA+AGG + Chr8:41258931-41258950 MsG0880044393.01.T01:CDS 30.0%
ATACTCTTACTTAGAAATCG+TGG + Chr8:41257689-41257708 MsG0880044393.01.T01:intron 30.0%
ATATAGATAACACTGGATGA+TGG - Chr8:41254615-41254634 None:intergenic 30.0%
ATCATCCAGTGTTATCTATA+TGG + Chr8:41254614-41254633 MsG0880044393.01.T01:intron 30.0%
ATGACGATGTGTTTATAAGT+GGG - Chr8:41258009-41258028 None:intergenic 30.0%
ATGTAGTTAGCCATGTATAT+AGG - Chr8:41258538-41258557 None:intergenic 30.0%
ATTCCTAGAAATCTAACAGA+GGG - Chr8:41257394-41257413 None:intergenic 30.0%
ATTGAAATTAAGGAGCAACT+AGG + Chr8:41260957-41260976 MsG0880044393.01.T01:intron 30.0%
CAATATAAAGATAAGGTTGG+GGG + Chr8:41255276-41255295 MsG0880044393.01.T01:intron 30.0%
CAATGGTTAGGATCTATTTA+TGG + Chr8:41257498-41257517 MsG0880044393.01.T01:intron 30.0%
CACAACTGAATTGATTACAA+TGG + Chr8:41257481-41257500 MsG0880044393.01.T01:intron 30.0%
CAGAAAACAATAGAAATGAG+AGG + Chr8:41261023-41261042 MsG0880044393.01.T01:intron 30.0%
CATAATAGGCAAGTAAAAGA+GGG - Chr8:41260037-41260056 None:intergenic 30.0%
CCATGTCAAAATTATGGATT+TGG - Chr8:41261831-41261850 None:intergenic 30.0%
CCCCATAATTCCAATTAAAA+TGG - Chr8:41260819-41260838 None:intergenic 30.0%
CGAAAACACTTAAAGTTACA+AGG - Chr8:41259403-41259422 None:intergenic 30.0%
CTATATTAATGCTGGAATTC+AGG + Chr8:41256690-41256709 MsG0880044393.01.T01:intron 30.0%
CTGAATTGATTACAATGGTT+AGG + Chr8:41257486-41257505 MsG0880044393.01.T01:intron 30.0%
CTGACAATGTGTTTATAAGT+GGG - Chr8:41257774-41257793 None:intergenic 30.0%
CTGATACCATGTCAAAATTA+TGG - Chr8:41261837-41261856 None:intergenic 30.0%
CTTTCTAACTTCTACTGAAA+TGG + Chr8:41260165-41260184 MsG0880044393.01.T01:intron 30.0%
GAAAATAGAAAGGAAACTGT+TGG + Chr8:41255846-41255865 MsG0880044393.01.T01:intron 30.0%
GCACATTGAGATATTGTATA+AGG + Chr8:41260575-41260594 MsG0880044393.01.T01:intron 30.0%
GCTGATGGCAAAAATAAATA+CGG + Chr8:41254980-41254999 MsG0880044393.01.T01:intron 30.0%
GGAACTTAATAGTAAAACAG+TGG + Chr8:41256170-41256189 MsG0880044393.01.T01:intron 30.0%
GGGATAAAATGATATCAGTT+CGG - Chr8:41255582-41255601 None:intergenic 30.0%
GGTTAAATAGTAGGACATTA+AGG - Chr8:41259236-41259255 None:intergenic 30.0%
TAAAATGGACATACAAACAG+AGG - Chr8:41260804-41260823 None:intergenic 30.0%
TAAATTAGCACTCATCAGAT+TGG - Chr8:41256073-41256092 None:intergenic 30.0%
TAATCAGTCCCTAAAGATTA+AGG + Chr8:41261519-41261538 MsG0880044393.01.T01:intron 30.0%
TAGATTCATGTATAGTGTCT+AGG + Chr8:41255904-41255923 MsG0880044393.01.T01:intron 30.0%
TAGTTGGCGTATTTATTATC+CGG - Chr8:41260935-41260954 None:intergenic 30.0%
TATCTACTTACCCATTGATA+AGG - Chr8:41256387-41256406 None:intergenic 30.0%
TATCTTCCAACAAATATTGG+TGG - Chr8:41260496-41260515 None:intergenic 30.0%
TATTCCTAGAAATCTAACAG+AGG - Chr8:41257395-41257414 None:intergenic 30.0%
TCAACGTAGAAGTTCATAAT+AGG - Chr8:41260051-41260070 None:intergenic 30.0%
TCATAATAGGCAAGTAAAAG+AGG - Chr8:41260038-41260057 None:intergenic 30.0%
TCCATTGTACATACTATACA+AGG - Chr8:41254198-41254217 None:intergenic 30.0%
TCCTTGTATAGTATGTACAA+TGG + Chr8:41254194-41254213 MsG0880044393.01.T01:intron 30.0%
TCCTTTAATTCAATGAGGAT+AGG - Chr8:41255355-41255374 None:intergenic 30.0%
TCTGACAATGTGTTTATAAG+TGG - Chr8:41257775-41257794 None:intergenic 30.0%
TGACAATGTGTTTATAAGTG+GGG - Chr8:41257773-41257792 None:intergenic 30.0%
TGTAGTTAGCCATGTATATA+GGG - Chr8:41258537-41258556 None:intergenic 30.0%
TTGACATGCAATACTATTGT+AGG + Chr8:41258906-41258925 MsG0880044393.01.T01:intron 30.0%
TTTAAACCTACTTACACTGT+TGG + Chr8:41259349-41259368 MsG0880044393.01.T01:CDS 30.0%
! AACAATATCTTTTCCCATAG+AGG + Chr8:41260285-41260304 MsG0880044393.01.T01:intron 30.0%
! AATTTTCACAAAACCCTCTA+TGG - Chr8:41260302-41260321 None:intergenic 30.0%
! ACAATATCTTTTCCCATAGA+GGG + Chr8:41260286-41260305 MsG0880044393.01.T01:intron 30.0%
! AGAATTCATCTTTTCCTGAT+TGG + Chr8:41259955-41259974 MsG0880044393.01.T01:intron 30.0%
! ATTGTTTTCCTATGTTACTC+TGG - Chr8:41261095-41261114 None:intergenic 30.0%
! ATTTTCACAAAACCCTCTAT+GGG - Chr8:41260301-41260320 None:intergenic 30.0%
! CGGTTTTCAAAACATTAGTT+AGG - Chr8:41260851-41260870 None:intergenic 30.0%
! CTTTTACTTGAATTGAAGAC+AGG + Chr8:41258848-41258867 MsG0880044393.01.T01:intron 30.0%
! GACTTGCATTTTTATCCATT+CGG + Chr8:41260461-41260480 MsG0880044393.01.T01:intron 30.0%
! GCATGTCTCTTATATGTTTT+TGG + Chr8:41259905-41259924 MsG0880044393.01.T01:intron 30.0%
! GCTTAATAAGCTTTGGTTTA+AGG + Chr8:41261618-41261637 MsG0880044393.01.T01:intron 30.0%
! TCTGACACCATATGATTTTT+GGG + Chr8:41255179-41255198 MsG0880044393.01.T01:intron 30.0%
! TGATTACCTGATATGCTTTT+TGG - Chr8:41256024-41256043 None:intergenic 30.0%
! TGTAGCACTGTTTTGTATTT+GGG + Chr8:41258160-41258179 MsG0880044393.01.T01:intron 30.0%
! TTAATCTTTAGGGACTGATT+AGG - Chr8:41261520-41261539 None:intergenic 30.0%
! TTGGTTTGAAAATAGAGAAC+CGG - Chr8:41255558-41255577 None:intergenic 30.0%
! TTGTAGCACTGTTTTGTATT+TGG + Chr8:41258159-41258178 MsG0880044393.01.T01:intron 30.0%
! TTTAATCGCATGTTTTCATG+AGG + Chr8:41260332-41260351 MsG0880044393.01.T01:intron 30.0%
!! CAAAGTACATGAGTTTTAGT+TGG - Chr8:41260542-41260561 None:intergenic 30.0%
!! CCAAATCCATAATTTTGACA+TGG + Chr8:41261828-41261847 MsG0880044393.01.T01:intron 30.0%
!! CTGGACAAGTTTTCTTATTT+TGG + Chr8:41257214-41257233 MsG0880044393.01.T01:intron 30.0%
!! GGATAGCTTTAACTAACATT+TGG - Chr8:41257665-41257684 None:intergenic 30.0%
!! TGAAGTAACTTGATAATGAG+TGG - Chr8:41253726-41253745 None:intergenic 30.0%
!! TTATTGAAGAGTGTTAGCTT+TGG + Chr8:41256149-41256168 MsG0880044393.01.T01:intron 30.0%
!! TTTAACTTGATTTCATGAGG+AGG + Chr8:41259076-41259095 MsG0880044393.01.T01:intron 30.0%
!!! AGCACCTTTTTCAATTTTTC+TGG - Chr8:41261436-41261455 None:intergenic 30.0%
!!! ATCTTGGTTTTAGATTTTGG+TGG - Chr8:41261071-41261090 None:intergenic 30.0%
!!! GGAATCTTGGTTTTAGATTT+TGG - Chr8:41261074-41261093 None:intergenic 30.0%
!!! GGTTTTAACTTGATTTCATG+AGG + Chr8:41259073-41259092 MsG0880044393.01.T01:intron 30.0%
!!! GTTTTCTGATCATTTCTAGT+TGG - Chr8:41261011-41261030 None:intergenic 30.0%
!!! TTGATCTTGTGTTTTTTGGT+TGG + Chr8:41254073-41254092 MsG0880044393.01.T01:intron 30.0%
!!! TTTATTTTTGCCATCAGCTA+AGG - Chr8:41254978-41254997 None:intergenic 30.0%
!!! TTTTTTTTTGTCTGTTGTCG+TGG + Chr8:41259512-41259531 MsG0880044393.01.T01:intron 30.0%
AAACAAAATGGTAGAGGCTA+CGG - Chr8:41256965-41256984 None:intergenic 35.0%
AACATAATATGGGAAGCTGA+TGG - Chr8:41262201-41262220 None:intergenic 35.0%
AACTACAACCAAAACAAGTG+AGG - Chr8:41257262-41257281 None:intergenic 35.0%
AAGGAAGTTTAATCTTGGGA+AGG - Chr8:41254374-41254393 None:intergenic 35.0%
AAGTTGAATTCTCCAAGCAT+GGG - Chr8:41255799-41255818 None:intergenic 35.0%
AATAGGAGGGATATATAGGT+AGG + Chr8:41255218-41255237 MsG0880044393.01.T01:intron 35.0%
AATTGTCAAGATTCTCCAGA+AGG - Chr8:41256303-41256322 None:intergenic 35.0%
ACCTGAAATTACCTTGATAC+AGG - Chr8:41256716-41256735 None:intergenic 35.0%
ACTACAACCAAAACAAGTGA+GGG - Chr8:41257261-41257280 None:intergenic 35.0%
ACTTCTTAGCAAATGCTGTT+AGG + Chr8:41254399-41254418 MsG0880044393.01.T01:intron 35.0%
ACTTTACTGCAACATGTTTG+AGG - Chr8:41261190-41261209 None:intergenic 35.0%
AGAAACAGAGAAAAAGAAGG+AGG - Chr8:41253751-41253770 None:intergenic 35.0%
AGCATATCAGGTAATCAACT+CGG + Chr8:41256027-41256046 MsG0880044393.01.T01:intron 35.0%
AGCTGACTAATCTAAGTGAT+TGG - Chr8:41260013-41260032 None:intergenic 35.0%
AGGAAACAGTTTATGCATCT+GGG + Chr8:41257189-41257208 MsG0880044393.01.T01:intron 35.0%
AGGAAGTTTAATCTTGGGAA+GGG - Chr8:41254373-41254392 None:intergenic 35.0%
AGGTAGTTTAGATCAAGATC+AGG - Chr8:41255335-41255354 None:intergenic 35.0%
AGTAGTGACTCTATTGTGAA+AGG - Chr8:41257149-41257168 None:intergenic 35.0%
AGTGACAAACAAAATGGTAG+AGG - Chr8:41256971-41256990 None:intergenic 35.0%
AGTGCTACAATAGCAAATGA+GGG - Chr8:41258149-41258168 None:intergenic 35.0%
ATAAGGCAATCAAGCAAAAG+TGG - Chr8:41256370-41256389 None:intergenic 35.0%
ATACAACGGTACAACTGTTT+AGG + Chr8:41255410-41255429 MsG0880044393.01.T01:intron 35.0%
ATAGGAGGGATATATAGGTA+GGG + Chr8:41255219-41255238 MsG0880044393.01.T01:intron 35.0%
ATCCACCATATAGATAACAC+TGG - Chr8:41254622-41254641 None:intergenic 35.0%
ATCCAGTGTTATCTATATGG+TGG + Chr8:41254617-41254636 MsG0880044393.01.T01:intron 35.0%
ATGAAATTGAGAAGGTAGTG+CGG - Chr8:41253793-41253812 None:intergenic 35.0%
ATTAAAGCTTCTGATCCAAG+TGG + Chr8:41259750-41259769 MsG0880044393.01.T01:intron 35.0%
ATTACCAAAATGAGCCAAAG+GGG + Chr8:41261118-41261137 MsG0880044393.01.T01:intron 35.0%
ATTGTCAAGATTCTCCAGAA+GGG - Chr8:41256302-41256321 None:intergenic 35.0%
ATTGTGATGCTATAATCCCA+AGG - Chr8:41258969-41258988 None:intergenic 35.0%
CAAACATGTTGCAGTAAAGT+GGG + Chr8:41261190-41261209 MsG0880044393.01.T01:intron 35.0%
CAAGACAAATGCTCTTCAAA+TGG + Chr8:41256199-41256218 MsG0880044393.01.T01:intron 35.0%
CATACTCAATTTGATGTACC+TGG + Chr8:41253906-41253925 MsG0880044393.01.T01:CDS 35.0%
CCATTCTCCCAAAAATCATA+TGG - Chr8:41255189-41255208 None:intergenic 35.0%
CTATTTATGGTTCCGTGTTA+CGG + Chr8:41257511-41257530 MsG0880044393.01.T01:intron 35.0%
CTCTTCAAATGGAATTGAGA+CGG + Chr8:41256210-41256229 MsG0880044393.01.T01:intron 35.0%
CTTACATGGTTCATCTATGA+AGG - Chr8:41260442-41260461 None:intergenic 35.0%
CTTACTTAGAAATCGTGGTT+GGG + Chr8:41257694-41257713 MsG0880044393.01.T01:intron 35.0%
CTTATATGCTCTATGTTGAG+GGG + Chr8:41255816-41255835 MsG0880044393.01.T01:intron 35.0%
CTTGACATCAAGTGTGTATT+GGG + Chr8:41256587-41256606 MsG0880044393.01.T01:intron 35.0%
GAAATCAATGAAAGTGAGTG+AGG - Chr8:41253644-41253663 None:intergenic 35.0%
GAATTACCAAAATGAGCCAA+AGG + Chr8:41261116-41261135 MsG0880044393.01.T01:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG - Chr8:41257772-41257791 None:intergenic 35.0%
GACTAATCAGACAATGTCAT+AGG + Chr8:41258074-41258093 MsG0880044393.01.T01:intron 35.0%
GATGACGATGTGTTTATAAG+TGG - Chr8:41258010-41258029 None:intergenic 35.0%
GATGAGTGCTAATTTACTCA+AGG + Chr8:41256077-41256096 MsG0880044393.01.T01:intron 35.0%
GATGCATGATGAAATTGAGA+AGG - Chr8:41253801-41253820 None:intergenic 35.0%
GCTTAAGGCTTAATAAGCTT+TGG + Chr8:41261611-41261630 MsG0880044393.01.T01:intron 35.0%
GCTTGGTTCATAGACATAAA+TGG + Chr8:41257852-41257871 MsG0880044393.01.T01:intron 35.0%
GGCATATCATTTATGCATTG+AGG - Chr8:41258516-41258535 None:intergenic 35.0%
GGTGGTTCTTATCATATAGT+TGG - Chr8:41261053-41261072 None:intergenic 35.0%
GGTTCATAGACATAAATGGT+GGG + Chr8:41257856-41257875 MsG0880044393.01.T01:intron 35.0%
GTAGTGACTCTATTGTGAAA+GGG - Chr8:41257148-41257167 None:intergenic 35.0%
GTGTTATCGAATTGTGGTTA+TGG - Chr8:41254786-41254805 None:intergenic 35.0%
GTTCACCAAAAGAAACAGTT+CGG - Chr8:41255603-41255622 None:intergenic 35.0%
GTTGCTGAAACAAAACACTA+GGG - Chr8:41256445-41256464 None:intergenic 35.0%
TAAAGTGAGCTGAATAAGAG+CGG - Chr8:41258106-41258125 None:intergenic 35.0%
TACAACGGTACAACTGTTTA+GGG + Chr8:41255411-41255430 MsG0880044393.01.T01:intron 35.0%
TACTCTCCTAGAATTCAACA+AGG + Chr8:41261959-41261978 MsG0880044393.01.T01:intron 35.0%
TAGGAAACAGTTTATGCATC+TGG + Chr8:41257188-41257207 MsG0880044393.01.T01:intron 35.0%
TAGGATATAGAATAGGAGAG+AGG + Chr8:41257104-41257123 MsG0880044393.01.T01:intron 35.0%
TAGTGACTAGAGTTTAAACG+CGG - Chr8:41259785-41259804 None:intergenic 35.0%
TATTGTGAAAGGGAAACCAT+TGG - Chr8:41257138-41257157 None:intergenic 35.0%
TCAAACATGTTGCAGTAAAG+TGG + Chr8:41261189-41261208 MsG0880044393.01.T01:intron 35.0%
TCAAGAGCAATGATGATAAG+TGG + Chr8:41260387-41260406 MsG0880044393.01.T01:CDS 35.0%
TCATTTATGCATTGAGGAAG+TGG - Chr8:41258510-41258529 None:intergenic 35.0%
TCTATATCCTAACATATCGC+AGG - Chr8:41257095-41257114 None:intergenic 35.0%
TCTATCACACACTTATAGAC+CGG + Chr8:41260080-41260099 MsG0880044393.01.T01:intron 35.0%
TCTGACAAATGCTACATTAG+TGG - Chr8:41259859-41259878 None:intergenic 35.0%
TCTTACTTAGAAATCGTGGT+TGG + Chr8:41257693-41257712 MsG0880044393.01.T01:intron 35.0%
TCTTGACATCAAGTGTGTAT+TGG + Chr8:41256586-41256605 MsG0880044393.01.T01:intron 35.0%
TGACGATGTGTTTATAAGTG+GGG - Chr8:41258008-41258027 None:intergenic 35.0%
TGATACCATCTTAGAAATCG+TGG + Chr8:41257934-41257953 MsG0880044393.01.T01:intron 35.0%
TGCTTGATTGCCTTATCAAT+GGG + Chr8:41256374-41256393 MsG0880044393.01.T01:CDS 35.0%
TGGTTCATAGACATAAATGG+TGG + Chr8:41257855-41257874 MsG0880044393.01.T01:intron 35.0%
TGTTGCTGAAACAAAACACT+AGG - Chr8:41256446-41256465 None:intergenic 35.0%
TTAAAGCTTCTGATCCAAGT+GGG + Chr8:41259751-41259770 MsG0880044393.01.T01:intron 35.0%
TTATCGAATTGTGGTTATGG+TGG - Chr8:41254783-41254802 None:intergenic 35.0%
TTATCTATGACTTTCTGCTC+CGG + Chr8:41256241-41256260 MsG0880044393.01.T01:intron 35.0%
TTCAATGATGGCCAAACTTT+GGG - Chr8:41259987-41260006 None:intergenic 35.0%
TTCACCAAAAGAAACAGTTC+GGG - Chr8:41255602-41255621 None:intergenic 35.0%
TTCCTTATATCCTTAGCTGA+TGG + Chr8:41254965-41254984 MsG0880044393.01.T01:intron 35.0%
TTGATGAAAGCAGTTGAAAG+AGG - Chr8:41260241-41260260 None:intergenic 35.0%
TTGCTTGATTGCCTTATCAA+TGG + Chr8:41256373-41256392 MsG0880044393.01.T01:CDS 35.0%
TTTCAAGGTGGCCAAAATTT+CGG - Chr8:41254672-41254691 None:intergenic 35.0%
TTTCCCTCTGTTAGATTTCT+AGG + Chr8:41257388-41257407 MsG0880044393.01.T01:intron 35.0%
! AACTAGGTTTTGCTCTTACA+TGG + Chr8:41261402-41261421 MsG0880044393.01.T01:intron 35.0%
! AAGTAAAAGTATGCAAGCCT+AGG - Chr8:41258837-41258856 None:intergenic 35.0%
! ACAGAACTAGTGTAGTTTGT+AGG - Chr8:41253932-41253951 None:intergenic 35.0%
! ACCTTTTACCATCCTGATTT+AGG + Chr8:41259253-41259272 MsG0880044393.01.T01:intron 35.0%
! ACGTACTATTTTGCAAGCTA+AGG - Chr8:41254150-41254169 None:intergenic 35.0%
! AGTGTTATCTATATGGTGGA+TGG + Chr8:41254621-41254640 MsG0880044393.01.T01:intron 35.0%
! ATCAAGGTAATTTCAGGTCT+TGG + Chr8:41256718-41256737 MsG0880044393.01.T01:intron 35.0%
! ATCTTTATTTGAAGGGTCCA+AGG - Chr8:41262357-41262376 None:intergenic 35.0%
! ATTGGTCTATTCCCAAAGTT+TGG + Chr8:41259973-41259992 MsG0880044393.01.T01:intron 35.0%
! CCTTTTACCATCCTGATTTA+GGG + Chr8:41259254-41259273 MsG0880044393.01.T01:intron 35.0%
! CTCTGACACCATATGATTTT+TGG + Chr8:41255178-41255197 MsG0880044393.01.T01:intron 35.0%
! GGAGCCAAATTTAAGTTTCT+TGG - Chr8:41261242-41261261 None:intergenic 35.0%
! GGCCAAAATTTCGGAATTTT+GGG - Chr8:41254663-41254682 None:intergenic 35.0%
! GTAATAGGTCCTGACATTTT+AGG + Chr8:41254858-41254877 MsG0880044393.01.T01:intron 35.0%
! GTTCAGCAATTTGTTCAAGT+TGG + Chr8:41254095-41254114 MsG0880044393.01.T01:intron 35.0%
! TAAGTTGAATTCTCCAAGCA+TGG - Chr8:41255800-41255819 None:intergenic 35.0%
! TCAAGGTAATTTCAGGTCTT+GGG + Chr8:41256719-41256738 MsG0880044393.01.T01:intron 35.0%
! TGGCCAAAATTTCGGAATTT+TGG - Chr8:41254664-41254683 None:intergenic 35.0%
!! AACTTGATAATGAGTGGAAG+AGG - Chr8:41253720-41253739 None:intergenic 35.0%
!! ACTTGATAATGAGTGGAAGA+GGG - Chr8:41253719-41253738 None:intergenic 35.0%
!! AGTAACCATGGTGTTGTAAT+AGG + Chr8:41254843-41254862 MsG0880044393.01.T01:intron 35.0%
!! ATTGTTGCGATGTTGATTTC+AGG + Chr8:41262290-41262309 MsG0880044393.01.T01:intron 35.0%
!! ATTTTGTTGTCAAGTCACCT+AGG + Chr8:41258817-41258836 MsG0880044393.01.T01:intron 35.0%
!! CATTTGAAGAGCATTTGTCT+TGG - Chr8:41256201-41256220 None:intergenic 35.0%
!! CCATATGATTTTTGGGAGAA+TGG + Chr8:41255186-41255205 MsG0880044393.01.T01:intron 35.0%
!! GAAGGAGTATGTATTTTCCT+TGG - Chr8:41260424-41260443 None:intergenic 35.0%
!! GCAGTTAGTTTCTGAAATCT+AGG + Chr8:41257553-41257572 MsG0880044393.01.T01:intron 35.0%
!! GGGAAGTGTTGAAAATAGAA+AGG + Chr8:41255836-41255855 MsG0880044393.01.T01:intron 35.0%
!! TGTGCTACTTATTGTATCAC+CGG + Chr8:41256479-41256498 MsG0880044393.01.T01:intron 35.0%
!! TTATCCCGAACTGTTTCTTT+TGG + Chr8:41255595-41255614 MsG0880044393.01.T01:intron 35.0%
!!! AAGTTGGCTAGTTTTTCTGA+AGG + Chr8:41258781-41258800 MsG0880044393.01.T01:CDS 35.0%
!!! ATATGTTTTTGGCAGTTCAC+TGG + Chr8:41258676-41258695 MsG0880044393.01.T01:intron 35.0%
!!! CTTTTTTCTGTGTGTGTTTC+AGG + Chr8:41258184-41258203 MsG0880044393.01.T01:intron 35.0%
!!! TTTTGCTATTCCACCATTGT+TGG + Chr8:41257309-41257328 MsG0880044393.01.T01:intron 35.0%
AAAATATGGTCAGTACCAGG+TGG + Chr8:41256639-41256658 MsG0880044393.01.T01:intron 40.0%
ACAACACCATGGTTACTCTT+TGG - Chr8:41254840-41254859 None:intergenic 40.0%
ACCATCTTAGAAATCGTGGT+TGG + Chr8:41257938-41257957 MsG0880044393.01.T01:intron 40.0%
AGCATCACAATGTTCATCAC+TGG + Chr8:41258978-41258997 MsG0880044393.01.T01:CDS 40.0%
AGTGTGCACTTGTGAATTGA+TGG - Chr8:41255988-41256007 None:intergenic 40.0%
AGTTTCCTGAATTGTCGACA+TGG - Chr8:41255475-41255494 None:intergenic 40.0%
ATATGCATGCATGTACGTGT+GGG + Chr8:41254549-41254568 MsG0880044393.01.T01:intron 40.0%
ATCTTTCCATCTACCAAAGG+AGG + Chr8:41258934-41258953 MsG0880044393.01.T01:CDS 40.0%
CAAAACGAGCCTAAAATGTC+AGG - Chr8:41254870-41254889 None:intergenic 40.0%
CAAAGGGAAAACATAGCGTA+AGG + Chr8:41257584-41257603 MsG0880044393.01.T01:intron 40.0%
CAACATATTTGTCCCATGCT+TGG + Chr8:41255784-41255803 MsG0880044393.01.T01:intron 40.0%
CAAGACATCAGTCTCAAAGA+AGG - Chr8:41257047-41257066 None:intergenic 40.0%
CACAATGTTCATCACTGGTA+TGG + Chr8:41258983-41259002 MsG0880044393.01.T01:intron 40.0%
CAGTGCTACAATAGCAAATG+AGG - Chr8:41258150-41258169 None:intergenic 40.0%
CCAAGATTCCAGAGTAACAT+AGG + Chr8:41261084-41261103 MsG0880044393.01.T01:intron 40.0%
CCATCTTAGAAATCGTGGTT+GGG + Chr8:41257939-41257958 MsG0880044393.01.T01:intron 40.0%
CCCTAAATCAGGATGGTAAA+AGG - Chr8:41259257-41259276 None:intergenic 40.0%
CTAATCCCCTAGCTATTTAC+CGG - Chr8:41256501-41256520 None:intergenic 40.0%
CTCTTTATTCACGAGTGTAG+AGG - Chr8:41254230-41254249 None:intergenic 40.0%
CTGGACCCTTTCTATCTTAT+AGG - Chr8:41261319-41261338 None:intergenic 40.0%
CTTACTAACAAGTGTCCTGA+CGG + Chr8:41254267-41254286 MsG0880044393.01.T01:intron 40.0%
CTTCAATGATGGCCAAACTT+TGG - Chr8:41259988-41260007 None:intergenic 40.0%
CTTGAATCGTTGGGTCAAAT+AGG + Chr8:41262392-41262411 MsG0880044393.01.T01:CDS 40.0%
GAAACTGCACTTGAATCGTT+GGG + Chr8:41262383-41262402 MsG0880044393.01.T01:CDS 40.0%
GACGATGTGTTTATAAGTGG+GGG - Chr8:41258007-41258026 None:intergenic 40.0%
GACTAAAGATAGGACCAGAA+AGG - Chr8:41261886-41261905 None:intergenic 40.0%
GAGCAATGATGATAAGTGGA+AGG + Chr8:41260391-41260410 MsG0880044393.01.T01:CDS 40.0%
GCAAGCTCAAGACTAAAGAT+AGG - Chr8:41261896-41261915 None:intergenic 40.0%
GCAGCAAGTGACAAACAAAA+TGG - Chr8:41256977-41256996 None:intergenic 40.0%
GCCTGTATCAAGGTAATTTC+AGG + Chr8:41256712-41256731 MsG0880044393.01.T01:intron 40.0%
GCGATTGAGAAAATCTGTAG+CGG - Chr8:41253694-41253713 None:intergenic 40.0%
GCTGATGCTGATCAATTCAA+TGG - Chr8:41255023-41255042 None:intergenic 40.0%
GTATCACCGGTAAATAGCTA+GGG + Chr8:41256492-41256511 MsG0880044393.01.T01:intron 40.0%
TAGGAGGGATATATAGGTAG+GGG + Chr8:41255220-41255239 MsG0880044393.01.T01:intron 40.0%
TATATGCATGCATGTACGTG+TGG + Chr8:41254548-41254567 MsG0880044393.01.T01:intron 40.0%
TATCACCGGTAAATAGCTAG+GGG + Chr8:41256493-41256512 MsG0880044393.01.T01:intron 40.0%
TATGATTCACCTAAACCACC+TGG - Chr8:41256657-41256676 None:intergenic 40.0%
TCACATATGCAGAAACGAAG+AGG + Chr8:41258729-41258748 MsG0880044393.01.T01:intron 40.0%
TCGTTTCTGCATATGTGAGA+AGG - Chr8:41258727-41258746 None:intergenic 40.0%
TGAAACTGCACTTGAATCGT+TGG + Chr8:41262382-41262401 MsG0880044393.01.T01:CDS 40.0%
TGAGATGAACTGAACCAAAC+TGG + Chr8:41255515-41255534 MsG0880044393.01.T01:intron 40.0%
TGATGACAAACCATGTACTG+TGG - Chr8:41253999-41254018 None:intergenic 40.0%
TGCCATCAGCTAAGGATATA+AGG - Chr8:41254970-41254989 None:intergenic 40.0%
TGTATCACCGGTAAATAGCT+AGG + Chr8:41256491-41256510 MsG0880044393.01.T01:intron 40.0%
TTAACCTAAAGGGAGAAGCA+GGG - Chr8:41258337-41258356 None:intergenic 40.0%
TTAACTAGGGTAGCCTGATT+AGG + Chr8:41259649-41259668 MsG0880044393.01.T01:intron 40.0%
TTACTAACAAGTGTCCTGAC+GGG + Chr8:41254268-41254287 MsG0880044393.01.T01:intron 40.0%
TTAGCTCAGAAACCGTAACA+CGG - Chr8:41257526-41257545 None:intergenic 40.0%
TTCTCTCATTCCACAGTACA+TGG + Chr8:41253986-41254005 MsG0880044393.01.T01:CDS 40.0%
TTGAACTTGAGAACCCTTAG+AGG - Chr8:41255767-41255786 None:intergenic 40.0%
TTGATTTCATGAGGAGGTTC+TGG + Chr8:41259082-41259101 MsG0880044393.01.T01:intron 40.0%
TTTATTATCCGGCTCAAGTG+CGG - Chr8:41260924-41260943 None:intergenic 40.0%
TTTGCCTATGTTACGCTTCT+GGG + Chr8:41257003-41257022 MsG0880044393.01.T01:intron 40.0%
! ACTTTGGGAATAGACCAATC+AGG - Chr8:41259972-41259991 None:intergenic 40.0%
! AGTGATTGGTGCTTCAATGA+TGG - Chr8:41259999-41260018 None:intergenic 40.0%
! ATTAGTGGTTTGCACTTCTG+AGG - Chr8:41259844-41259863 None:intergenic 40.0%
! CAAATGAGGGTATATGCTAG+TGG - Chr8:41258136-41258155 None:intergenic 40.0%
! GATAACACTGGATGATGGTA+AGG - Chr8:41254610-41254629 None:intergenic 40.0%
! GGCCCAAAATTCCGAAATTT+TGG + Chr8:41254658-41254677 MsG0880044393.01.T01:intron 40.0%
! TCATAGACATAAATGGTGGG+TGG + Chr8:41257859-41257878 MsG0880044393.01.T01:intron 40.0%
! TGGTGGATAAAAGAACCGAA+TGG - Chr8:41260479-41260498 None:intergenic 40.0%
! TTAGTGGTTTGCACTTCTGA+GGG - Chr8:41259843-41259862 None:intergenic 40.0%
! TTTTGCCTATGTTACGCTTC+TGG + Chr8:41257002-41257021 MsG0880044393.01.T01:intron 40.0%
!! ACCAAACTGGTGCTATAGTT+CGG + Chr8:41255528-41255547 MsG0880044393.01.T01:intron 40.0%
!! ATTTGTTCAAGTTGGTCTGC+AGG + Chr8:41254103-41254122 MsG0880044393.01.T01:CDS 40.0%
!! CCTATGTTACTCTGGAATCT+TGG - Chr8:41261087-41261106 None:intergenic 40.0%
!! GAGTGTTAAGAGTACCACAT+CGG - Chr8:41258039-41258058 None:intergenic 40.0%
!! GTGTGTTAAGAGTACCACAT+CGG - Chr8:41257809-41257828 None:intergenic 40.0%
!! GTTATCTATATGGTGGATGG+CGG + Chr8:41254624-41254643 MsG0880044393.01.T01:intron 40.0%
!! TCTTAAGTTGGTATCAGAGC+AGG - Chr8:41258379-41258398 None:intergenic 40.0%
!!! AGGTTGTGTGGTTTTGTGTT+AGG - Chr8:41257720-41257739 None:intergenic 40.0%
!!! ATCACTGCATGGCTTGTTTT+TGG + Chr8:41259804-41259823 MsG0880044393.01.T01:intron 40.0%
!!! ATGTTTTGAAAACCGGACAG+AGG + Chr8:41260856-41260875 MsG0880044393.01.T01:intron 40.0%
AAACCACTAACCAGGGTAGT+TGG - Chr8:41253569-41253588 None:intergenic 45.0%
AAAGGAGGTGATACAGACCT+TGG + Chr8:41258949-41258968 MsG0880044393.01.T01:CDS 45.0%
AACTCGACCCTAAATCAGGA+TGG - Chr8:41259264-41259283 None:intergenic 45.0%
AAGGAGGTGATACAGACCTT+GGG + Chr8:41258950-41258969 MsG0880044393.01.T01:CDS 45.0%
AAGGTCTGTATCACCTCCTT+TGG - Chr8:41258950-41258969 None:intergenic 45.0%
AAGTGGAAGGCTACTATCCA+AGG + Chr8:41260404-41260423 MsG0880044393.01.T01:CDS 45.0%
AATACAGTCTGTCTCCTTGC+AGG + Chr8:41262147-41262166 MsG0880044393.01.T01:intron 45.0%
ACAAGGACAGCTGACAGTAA+AGG - Chr8:41262047-41262066 None:intergenic 45.0%
ACCACACAACCTCACAAAAC+CGG + Chr8:41257728-41257747 MsG0880044393.01.T01:intron 45.0%
ACCGAACTATAGCACCAGTT+TGG - Chr8:41255532-41255551 None:intergenic 45.0%
ACGGCAGTGTTATCGAATTG+TGG - Chr8:41254792-41254811 None:intergenic 45.0%
AGACATGCAGTGACGATCAA+CGG - Chr8:41259893-41259912 None:intergenic 45.0%
AGACCATCTCATATCCGATG+TGG + Chr8:41257792-41257811 MsG0880044393.01.T01:intron 45.0%
AGAGAGAGAAACCACTAACC+AGG - Chr8:41253577-41253596 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+TGG - Chr8:41253587-41253606 None:intergenic 45.0%
AGAGCCTCTTCAAGATCCAT+TGG - Chr8:41257915-41257934 None:intergenic 45.0%
AGCATAACAGACTGATGGCT+GGG + Chr8:41261369-41261388 MsG0880044393.01.T01:intron 45.0%
AGCTCTGTTGTGGAGGAATA+TGG + Chr8:41254691-41254710 MsG0880044393.01.T01:intron 45.0%
AGCTGCTTGAAGGAGTTGTT+GGG - Chr8:41253536-41253555 None:intergenic 45.0%
AGGGATATATAGGTAGGGGA+AGG + Chr8:41255224-41255243 MsG0880044393.01.T01:intron 45.0%
ATACAGTCTGTCTCCTTGCA+GGG + Chr8:41262148-41262167 MsG0880044393.01.T01:intron 45.0%
ATGCAACCAACCTCCAACAA+TGG - Chr8:41257325-41257344 None:intergenic 45.0%
ATTCCACCATTGTTGGAGGT+TGG + Chr8:41257316-41257335 MsG0880044393.01.T01:intron 45.0%
CAGGACCTATTACAACACCA+TGG - Chr8:41254851-41254870 None:intergenic 45.0%
CAGTTTATGCATCTGGGTTC+TGG + Chr8:41257195-41257214 MsG0880044393.01.T01:intron 45.0%
CATATGCAGAAACGAAGAGG+TGG + Chr8:41258732-41258751 MsG0880044393.01.T01:intron 45.0%
CCAAACCATGTCGACAATTC+AGG + Chr8:41255467-41255486 MsG0880044393.01.T01:intron 45.0%
CCTAAAGATGCAACCAGTGT+TGG - Chr8:41254582-41254601 None:intergenic 45.0%
CCTGAATTGTCGACATGGTT+TGG - Chr8:41255470-41255489 None:intergenic 45.0%
CGAACCAACAGTAGCAAGAA+AGG - Chr8:41258210-41258229 None:intergenic 45.0%
CGGTAAATAGCTAGGGGATT+AGG + Chr8:41256499-41256518 MsG0880044393.01.T01:intron 45.0%
CTAACACAACCTCACAGAAC+CGG + Chr8:41257963-41257982 MsG0880044393.01.T01:intron 45.0%
CTCCAGAACCAAACCACTAA+CGG - Chr8:41255437-41255456 None:intergenic 45.0%
CTCTAGTCACTATCACTGCA+TGG + Chr8:41259793-41259812 MsG0880044393.01.T01:intron 45.0%
CTGCTTCCAACAGTGTAAGT+AGG - Chr8:41259358-41259377 None:intergenic 45.0%
CTGGTCATGTTCCTCGAAAT+AGG + Chr8:41261932-41261951 MsG0880044393.01.T01:intron 45.0%
CTGTTGTGGAGGAATATGGT+GGG + Chr8:41254695-41254714 MsG0880044393.01.T01:intron 45.0%
CTTAACCTAAAGGGAGAAGC+AGG - Chr8:41258338-41258357 None:intergenic 45.0%
CTTGACCAGTGTTATGACGA+CGG - Chr8:41254811-41254830 None:intergenic 45.0%
GAGAGAGAAACCACTAACCA+GGG - Chr8:41253576-41253595 None:intergenic 45.0%
GAGAGTAGTCTCCTATTTCG+AGG - Chr8:41261946-41261965 None:intergenic 45.0%
GAGCCTCTTCAAGATCCATT+GGG - Chr8:41257914-41257933 None:intergenic 45.0%
GGAAAACTCCACTACTTGAC+TGG - Chr8:41255129-41255148 None:intergenic 45.0%
GGGAAAACATAGCGTAAGGA+CGG + Chr8:41257588-41257607 MsG0880044393.01.T01:intron 45.0%
GTACCACATCGGATATGAGA+TGG - Chr8:41257798-41257817 None:intergenic 45.0%
GTATCACCTCCTTTGGTAGA+TGG - Chr8:41258943-41258962 None:intergenic 45.0%
TAGCTGCTTGAAGGAGTTGT+TGG - Chr8:41253537-41253556 None:intergenic 45.0%
TCCTCACGACCAACACTATT+GGG + Chr8:41257830-41257849 MsG0880044393.01.T01:intron 45.0%
TCGAGTAGTAAAGACCGATC+AGG - Chr8:41255097-41255116 None:intergenic 45.0%
TCGTCATCTCATATCCGATG+TGG + Chr8:41258022-41258041 MsG0880044393.01.T01:intron 45.0%
TCTGTTGTGGAGGAATATGG+TGG + Chr8:41254694-41254713 MsG0880044393.01.T01:intron 45.0%
TGAACCAAGCCCAATAGTGT+TGG - Chr8:41257842-41257861 None:intergenic 45.0%
TGAGGTTAGCGACGATTTCA+AGG + Chr8:41260350-41260369 MsG0880044393.01.T01:intron 45.0%
TGCTATCAGGTTTCCGCTAT+CGG - Chr8:41257886-41257905 None:intergenic 45.0%
TGCTATTCCACCATTGTTGG+AGG + Chr8:41257312-41257331 MsG0880044393.01.T01:intron 45.0%
TGCTGCTGCACATTTCTTTC+TGG + Chr8:41261913-41261932 MsG0880044393.01.T01:intron 45.0%
TGGAATTCAGGCCTGTATCA+AGG + Chr8:41256702-41256721 MsG0880044393.01.T01:intron 45.0%
TGGTGTGTTTCACCTCTTGA+GGG + Chr8:41259204-41259223 MsG0880044393.01.T01:intron 45.0%
TGTGAAAGGGAAACCATTGG+AGG - Chr8:41257135-41257154 None:intergenic 45.0%
TTAAGGCATGTTCCCTCAAG+AGG - Chr8:41259219-41259238 None:intergenic 45.0%
TTAGGGTCGAGTTCGTGTAT+TGG + Chr8:41259271-41259290 MsG0880044393.01.T01:intron 45.0%
TTCCAGCCAAAGAGTAACCA+TGG + Chr8:41254831-41254850 MsG0880044393.01.T01:intron 45.0%
TTCTGCACCTGCGATATGTT+AGG + Chr8:41257085-41257104 MsG0880044393.01.T01:intron 45.0%
TTGACATGGTATCAGACCCT+GGG + Chr8:41261842-41261861 MsG0880044393.01.T01:intron 45.0%
TTGGTGTGTTTCACCTCTTG+AGG + Chr8:41259203-41259222 MsG0880044393.01.T01:intron 45.0%
TTTGACATGGTATCAGACCC+TGG + Chr8:41261841-41261860 MsG0880044393.01.T01:intron 45.0%
! ACTAGTGTAGTTTGTAGGCC+AGG - Chr8:41253927-41253946 None:intergenic 45.0%
! CCAACACTGGTTGCATCTTT+AGG + Chr8:41254579-41254598 MsG0880044393.01.T01:intron 45.0%
! CCCAACCACGATTTCTAAGA+TGG - Chr8:41257942-41257961 None:intergenic 45.0%
! GAAATGACTGGTCACCTGAT+CGG + Chr8:41255080-41255099 MsG0880044393.01.T01:intron 45.0%
! GAGTTTTCCTTTGCCATCGA+GGG + Chr8:41255140-41255159 MsG0880044393.01.T01:intron 45.0%
! GGTTGCATCTCTTTTTCTGC+TGG + Chr8:41257337-41257356 MsG0880044393.01.T01:intron 45.0%
! TTGGTCTCCCTCACTTGTTT+TGG + Chr8:41257251-41257270 MsG0880044393.01.T01:intron 45.0%
!! ACAACCCCTTTGGCTCATTT+TGG - Chr8:41261125-41261144 None:intergenic 45.0%
!! AGAAGGTGTTGCAAAGACGA+TGG - Chr8:41257030-41257049 None:intergenic 45.0%
!! AGTTCGTGTATTGGCTTTGG+TGG + Chr8:41259280-41259299 MsG0880044393.01.T01:CDS 45.0%
!! CACTAGTTCTGTGCCTTGAA+AGG + Chr8:41253940-41253959 MsG0880044393.01.T01:CDS 45.0%
!! TCGAGTTCGTGTATTGGCTT+TGG + Chr8:41259277-41259296 MsG0880044393.01.T01:CDS 45.0%
!! TGTTTTCGAGCTGCTCTATG+AGG + Chr8:41259415-41259434 MsG0880044393.01.T01:CDS 45.0%
!! TTCTACTAGGGGTTAGTCTG+CGG - Chr8:41261700-41261719 None:intergenic 45.0%
!!! GTTGGTTCGCTTTTTGTGCT+GGG + Chr8:41258221-41258240 MsG0880044393.01.T01:intron 45.0%
!!! TGTTGGTTCGCTTTTTGTGC+TGG + Chr8:41258220-41258239 MsG0880044393.01.T01:intron 45.0%
!!! TGTTTTTGGCACCTTCTGAC+TGG + Chr8:41259919-41259938 MsG0880044393.01.T01:intron 45.0%
!!! TTGGTTCGCTTTTTGTGCTG+GGG + Chr8:41258222-41258241 MsG0880044393.01.T01:intron 45.0%
!! AAAAAAAGAAATTTAAATTA+TGG - Chr8:41261800-41261819 None:intergenic 5.0%
AAACTGGAACAACCCCTGCA+AGG - Chr8:41262164-41262183 None:intergenic 50.0%
ACACTAGTTCGACCTCTGTC+CGG - Chr8:41260871-41260890 None:intergenic 50.0%
ACCAGGGTAGTTGGCGAAAT+CGG - Chr8:41253560-41253579 None:intergenic 50.0%
ACGACCAACACTATTGGGCT+TGG + Chr8:41257835-41257854 MsG0880044393.01.T01:intron 50.0%
AGAAGGTAGTGCGGTGAGAA+TGG - Chr8:41253784-41253803 None:intergenic 50.0%
AGGGTCCAGTACAACCCAAT+CGG + Chr8:41261330-41261349 MsG0880044393.01.T01:intron 50.0%
ATGAGCCAAAGGGGTTGTAG+AGG + Chr8:41261127-41261146 MsG0880044393.01.T01:intron 50.0%
CAAAATGGTAGAGGCTACGG+TGG - Chr8:41256962-41256981 None:intergenic 50.0%
CAACCAACCTCCAACAATGG+TGG - Chr8:41257322-41257341 None:intergenic 50.0%
CACCATGGTTACTCTTTGGC+TGG - Chr8:41254836-41254855 None:intergenic 50.0%
CACGAACTCGACCCTAAATC+AGG - Chr8:41259268-41259287 None:intergenic 50.0%
CAGCATAACAGACTGATGGC+TGG + Chr8:41261368-41261387 MsG0880044393.01.T01:intron 50.0%
CAGGCCTTTCTTGCTACTGT+TGG + Chr8:41258203-41258222 MsG0880044393.01.T01:intron 50.0%
CCACAACAGAGCTTTCAAGG+TGG - Chr8:41254684-41254703 None:intergenic 50.0%
CCACCTTGAAAGCTCTGTTG+TGG + Chr8:41254681-41254700 MsG0880044393.01.T01:intron 50.0%
CCTCCACAACAGAGCTTTCA+AGG - Chr8:41254687-41254706 None:intergenic 50.0%
CCTTGAAAGCTCTGTTGTGG+AGG + Chr8:41254684-41254703 MsG0880044393.01.T01:intron 50.0%
CGAAATCGGTAGCTGCTTGA+AGG - Chr8:41253546-41253565 None:intergenic 50.0%
CGGTTCTGTGAGGTTGTGTT+AGG - Chr8:41257965-41257984 None:intergenic 50.0%
CGGTTGAACCGGTTGAACAA+TGG - Chr8:41260904-41260923 None:intergenic 50.0%
CTCCACTACTTGACTGGAGA+CGG - Chr8:41255123-41255142 None:intergenic 50.0%
CTCCTCACGACCAACACTAT+TGG + Chr8:41257829-41257848 MsG0880044393.01.T01:intron 50.0%
CTGGCAGCATAACAGACTGA+TGG + Chr8:41261364-41261383 MsG0880044393.01.T01:intron 50.0%
GAAATGGATGCAGCTAGCAG+AGG + Chr8:41260181-41260200 MsG0880044393.01.T01:intron 50.0%
GAGAGAGGTCTATCCTCCAA+TGG + Chr8:41257119-41257138 MsG0880044393.01.T01:intron 50.0%
GCAATCATCACCTCACAAGC+CGG - Chr8:41257750-41257769 None:intergenic 50.0%
GGACTGAAGTCTACCCTCAA+TGG - Chr8:41262336-41262355 None:intergenic 50.0%
GTCGCTGGTATGGTGAATGA+CGG - Chr8:41254728-41254747 None:intergenic 50.0%
TACAGTCTGTCTCCTTGCAG+GGG + Chr8:41262149-41262168 MsG0880044393.01.T01:intron 50.0%
TACCGTCTCCAGTCAAGTAG+TGG + Chr8:41255118-41255137 MsG0880044393.01.T01:intron 50.0%
TCAGTCTGTTATGCTGCCAG+AGG - Chr8:41261364-41261383 None:intergenic 50.0%
TCATCTCTCATAGCCCTCGA+TGG - Chr8:41255156-41255175 None:intergenic 50.0%
TGACATGGTATCAGACCCTG+GGG + Chr8:41261843-41261862 MsG0880044393.01.T01:intron 50.0%
TGAGCCAAAGGGGTTGTAGA+GGG + Chr8:41261128-41261147 MsG0880044393.01.T01:intron 50.0%
TGAGGGTAGACTTCAGTCCT+TGG + Chr8:41262337-41262356 MsG0880044393.01.T01:CDS 50.0%
TGATAGGGTCACCAGTCAGA+AGG - Chr8:41259933-41259952 None:intergenic 50.0%
TGCTTGAAGGAGTTGTTGGG+AGG - Chr8:41253533-41253552 None:intergenic 50.0%
TGGCCCAATGGATCTTGAAG+AGG + Chr8:41257908-41257927 MsG0880044393.01.T01:intron 50.0%
TGGTCAGTACCAGGTGGTTT+AGG + Chr8:41256645-41256664 MsG0880044393.01.T01:intron 50.0%
TGTGGGTTTCTGTCCAACAC+TGG + Chr8:41254566-41254585 MsG0880044393.01.T01:intron 50.0%
TTTGCAGGTCACTTCCCTTC+TGG + Chr8:41256285-41256304 MsG0880044393.01.T01:intron 50.0%
! CAACTGTTTAGGGCCGTTAG+TGG + Chr8:41255421-41255440 MsG0880044393.01.T01:intron 50.0%
! CTAGACCGATTGGGTTGTAC+TGG - Chr8:41261338-41261357 None:intergenic 50.0%
! GGAGTTTTCCTTTGCCATCG+AGG + Chr8:41255139-41255158 MsG0880044393.01.T01:intron 50.0%
! GGTGCTATAGTTCGGTGAAC+CGG + Chr8:41255536-41255555 MsG0880044393.01.T01:intron 50.0%
! GTTTAGGGCCGTTAGTGGTT+TGG + Chr8:41255426-41255445 MsG0880044393.01.T01:intron 50.0%
! TGGACCCAGAAGCGTAACAT+AGG - Chr8:41257010-41257029 None:intergenic 50.0%
!! CAATAGTGTTGGTCGTGAGG+AGG - Chr8:41257831-41257850 None:intergenic 50.0%
!! CGTTAGTGGTTTGGTTCTGG+AGG + Chr8:41255435-41255454 MsG0880044393.01.T01:intron 50.0%
!! GATAGCGGAAACCTGATAGC+AGG + Chr8:41257885-41257904 MsG0880044393.01.T01:intron 50.0%
!! GCGAGCATTGCTGACTCTAA+TGG - Chr8:41256911-41256930 None:intergenic 50.0%
!!! GGATTTTGAGGTCGCTGGTA+TGG - Chr8:41254738-41254757 None:intergenic 50.0%
!!! GGCTAGTTTTTCTGAAGGCC+TGG + Chr8:41258786-41258805 MsG0880044393.01.T01:CDS 50.0%
!!! TGGTTCGCTTTTTGTGCTGG+GGG + Chr8:41258223-41258242 MsG0880044393.01.T01:intron 50.0%
AAACGAAGAGGTGGCAGCTG+GGG + Chr8:41258741-41258760 MsG0880044393.01.T01:CDS 55.0%
ACACAGCTCGCTCGCAGATA+TGG + Chr8:41253498-41253517 MsG0880044393.01.T01:exon 55.0%
AGAAACGAAGAGGTGGCAGC+TGG + Chr8:41258739-41258758 MsG0880044393.01.T01:intron 55.0%
AGCGGAAACCTGATAGCAGG+TGG + Chr8:41257888-41257907 MsG0880044393.01.T01:intron 55.0%
AGCTCCCTCTACAACCCCTT+TGG - Chr8:41261135-41261154 None:intergenic 55.0%
CACTGCCGTCGTCATAACAC+TGG + Chr8:41254803-41254822 MsG0880044393.01.T01:intron 55.0%
CAGAGGTCGCTAGACCGATT+GGG - Chr8:41261347-41261366 None:intergenic 55.0%
CAGCTAGCAGAGGTTGAGCA+TGG + Chr8:41260191-41260210 MsG0880044393.01.T01:intron 55.0%
CCATATTCGCAAGACCCGTC+AGG - Chr8:41254285-41254304 None:intergenic 55.0%
CCTCAAAATCCGCCACCGAT+AGG + Chr8:41254747-41254766 MsG0880044393.01.T01:intron 55.0%
CGAGCGAGCTGTGTAAACAC+CGG - Chr8:41253492-41253511 None:intergenic 55.0%
CTCATAGCCCTCGATGGCAA+AGG - Chr8:41255150-41255169 None:intergenic 55.0%
CTGCGAGTGAATGTCACGTG+CGG - Chr8:41256933-41256952 None:intergenic 55.0%
GAAACGAAGAGGTGGCAGCT+GGG + Chr8:41258740-41258759 MsG0880044393.01.T01:intron 55.0%
GAACCGGTTGAACAATGGCC+CGG - Chr8:41260899-41260918 None:intergenic 55.0%
GCAATCCTCACCTCACAAGC+CGG - Chr8:41257985-41258004 None:intergenic 55.0%
GGTCGAACTAGTGTGACCTC+CGG + Chr8:41260877-41260896 MsG0880044393.01.T01:intron 55.0%
GTCGAACTAGTGTGACCTCC+GGG + Chr8:41260878-41260897 MsG0880044393.01.T01:intron 55.0%
TAACAGACTGATGGCTGGGC+TGG + Chr8:41261373-41261392 MsG0880044393.01.T01:intron 55.0%
TCAGCCCTGCTTCTCCCTTT+AGG + Chr8:41258330-41258349 MsG0880044393.01.T01:intron 55.0%
TCGCCAACTACCCTGGTTAG+TGG + Chr8:41253563-41253582 MsG0880044393.01.T01:intron 55.0%
! ACCGATTTCGCCAACTACCC+TGG + Chr8:41253556-41253575 MsG0880044393.01.T01:CDS 55.0%
! CACTTCTGAGGGCTTCGTGA+AGG - Chr8:41259832-41259851 None:intergenic 55.0%
! CCTGACGGGTCTTGCGAATA+TGG + Chr8:41254282-41254301 MsG0880044393.01.T01:intron 55.0%
! TTGTGGTTATGGTGGCGCCA+TGG - Chr8:41254775-41254794 None:intergenic 55.0%
!! AATGGTGGGTGGTCCGATAG+CGG + Chr8:41257870-41257889 MsG0880044393.01.T01:intron 55.0%
!! ATATGGTGGATGGCGGTCTG+TGG + Chr8:41254631-41254650 MsG0880044393.01.T01:intron 55.0%
!! CCTCACAAAACCGGCTTGTG+AGG + Chr8:41257737-41257756 MsG0880044393.01.T01:intron 55.0%
!! CCTCACAAGCCGGTTTTGTG+AGG - Chr8:41257740-41257759 None:intergenic 55.0%
!! GCCCAATAGTGTTGGTCGTG+AGG - Chr8:41257834-41257853 None:intergenic 55.0%
!! GCCGGTTTTGTGAGGTTGTG+TGG - Chr8:41257732-41257751 None:intergenic 55.0%
!! GGCCGTTAGTGGTTTGGTTC+TGG + Chr8:41255432-41255451 MsG0880044393.01.T01:intron 55.0%
!!! CCTATCGGTGGCGGATTTTG+AGG - Chr8:41254750-41254769 None:intergenic 55.0%
ACGCGGATGCAGAACCCACT+TGG - Chr8:41259768-41259787 None:intergenic 60.0%
AGACCCTGGGGTTCTGTCCA+GGG + Chr8:41261855-41261874 MsG0880044393.01.T01:intron 60.0%
CCAATCGGTCTAGCGACCTC+TGG + Chr8:41261345-41261364 MsG0880044393.01.T01:intron 60.0%
CCAGAGGTCGCTAGACCGAT+TGG - Chr8:41261348-41261367 None:intergenic 60.0%
CCATTGGGCCACCTGCTATC+AGG - Chr8:41257899-41257918 None:intergenic 60.0%
CCTCCGGGCCATTGTTCAAC+CGG + Chr8:41260893-41260912 MsG0880044393.01.T01:intron 60.0%
CCTGATAGCAGGTGGCCCAA+TGG + Chr8:41257896-41257915 MsG0880044393.01.T01:intron 60.0%
CGGCTCAAGTGCGGTTGAAC+CGG - Chr8:41260915-41260934 None:intergenic 60.0%
CGGTTCAACCGCACTTGAGC+CGG + Chr8:41260913-41260932 MsG0880044393.01.T01:intron 60.0%
TGTCCAGGGACGCACCTTTC+TGG + Chr8:41261869-41261888 MsG0880044393.01.T01:intron 60.0%
! CCTCACAAGCCGGTTCTGTG+AGG - Chr8:41257975-41257994 None:intergenic 60.0%
! GCTGGGCTGGAGTCAGAACT+AGG + Chr8:41261386-41261405 MsG0880044393.01.T01:intron 60.0%
!! CAGAACCGGCTTGTGAGGTG+AGG + Chr8:41257977-41257996 MsG0880044393.01.T01:intron 60.0%
!! CCTCACAGAACCGGCTTGTG+AGG + Chr8:41257972-41257991 MsG0880044393.01.T01:intron 60.0%
!!! GTGGCGGATTTTGAGGTCGC+TGG - Chr8:41254743-41254762 None:intergenic 60.0%
CAGACCCTGGGGTTCTGTCC+AGG + Chr8:41261854-41261873 MsG0880044393.01.T01:intron 65.0%
CCGGTTGAACAATGGCCCGG+AGG - Chr8:41260896-41260915 None:intergenic 65.0%
CGTCCCTGGACAGAACCCCA+GGG - Chr8:41261861-41261880 None:intergenic 65.0%
! GGACCAGAAAGGTGCGTCCC+TGG - Chr8:41261875-41261894 None:intergenic 65.0%
! TGGTGGATGGCGGTCTGTGG+CGG + Chr8:41254634-41254653 MsG0880044393.01.T01:intron 65.0%
GCCATGGCGCCTATCGGTGG+CGG - Chr8:41254759-41254778 None:intergenic 70.0%
GCGTCCCTGGACAGAACCCC+AGG - Chr8:41261862-41261881 None:intergenic 70.0%
GGTGGCGCCATGGCGCCTAT+CGG - Chr8:41254765-41254784 None:intergenic 70.0%
TCCGCCACCGATAGGCGCCA+TGG + Chr8:41254755-41254774 MsG0880044393.01.T01:intron 70.0%
! TGGATGGCGGTCTGTGGCGG+AGG + Chr8:41254637-41254656 MsG0880044393.01.T01:intron 70.0%
GGCGCCATGGCGCCTATCGG+TGG - Chr8:41254762-41254781 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 41253473 41262439 41253473 ID=MsG0880044393.01;Name=MsG0880044393.01
Chr8 mRNA 41253473 41262439 41253473 ID=MsG0880044393.01.T01;Parent=MsG0880044393.01;Name=MsG0880044393.01.T01;_AED=0.48;_eAED=0.48;_QI=44|1|0.90|1|1|1|11|0|333
Chr8 exon 41262312 41262439 41262312 ID=MsG0880044393.01.T01:exon:39345;Parent=MsG0880044393.01.T01
Chr8 exon 41260359 41260456 41260359 ID=MsG0880044393.01.T01:exon:39344;Parent=MsG0880044393.01.T01
Chr8 exon 41260194 41260267 41260194 ID=MsG0880044393.01.T01:exon:39343;Parent=MsG0880044393.01.T01
Chr8 exon 41259275 41259436 41259275 ID=MsG0880044393.01.T01:exon:39342;Parent=MsG0880044393.01.T01
Chr8 exon 41258928 41258999 41258928 ID=MsG0880044393.01.T01:exon:39341;Parent=MsG0880044393.01.T01
Chr8 exon 41258741 41258807 41258741 ID=MsG0880044393.01.T01:exon:39340;Parent=MsG0880044393.01.T01
Chr8 exon 41256292 41256395 41256292 ID=MsG0880044393.01.T01:exon:39339;Parent=MsG0880044393.01.T01
Chr8 exon 41254101 41254163 41254101 ID=MsG0880044393.01.T01:exon:39338;Parent=MsG0880044393.01.T01
Chr8 exon 41253899 41254007 41253899 ID=MsG0880044393.01.T01:exon:39337;Parent=MsG0880044393.01.T01
Chr8 exon 41253673 41253736 41253673 ID=MsG0880044393.01.T01:exon:39336;Parent=MsG0880044393.01.T01
Chr8 exon 41253473 41253577 41253473 ID=MsG0880044393.01.T01:exon:39335;Parent=MsG0880044393.01.T01
Chr8 five_prime_UTR 41253473 41253516 41253473 ID=MsG0880044393.01.T01:five_prime_utr;Parent=MsG0880044393.01.T01
Chr8 CDS 41253517 41253577 41253517 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41253673 41253736 41253673 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41253899 41254007 41253899 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41254101 41254163 41254101 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41256292 41256395 41256292 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41258741 41258807 41258741 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41258928 41258999 41258928 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41259275 41259436 41259275 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41260194 41260267 41260194 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41260359 41260456 41260359 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Chr8 CDS 41262312 41262439 41262312 ID=MsG0880044393.01.T01:cds;Parent=MsG0880044393.01.T01
Gene Sequence

>MsG0880044393.01.T01

ATGGACGAACAATCCTCCCAACAACTCCTTCAAGCAGCTACCGATTTCGCCAACTACCCTGGTTCTCACAGTGATGATTCCGCTACAGATTTTCTCAATCGCTTCCCTCTTCCACTCATTATCAATGCATTACATACTCAATTTGATGTACCTGGCCTACAAACTACACTAGTTCTGTGCCTTGAAAGGTTATTCAAAACAAAATTCGGTGCTTCTCTCATTCCACAGTACATGCAATTTGTTCAAGTTGGTCTGCAGGCAGATTCTCAAGCAGTCAGATCCTTAGCTTGCAAAATAGTCACTTCCCTTCTGGAGAATCTTGACAATTCTTACACAGTTGCTGCTCATCTTATTAAAGAATTCAACATATATCCACTTTTGCTTGATTGCCTTATCAATGGAAACGAAGAGGTGGCAGCTGGGGCAATCGATGCAATAAAAAAGTTGGCTAGTTTTTCTGAAGGCCTGGACATAATCTTTCCATCTACCAAAGGAGGTGATACAGACCTTGGGATTATAGCATCACAATGTTCATCACTGGGTCGAGTTCGTGTATTGGCTTTGGTGGTGAAGCTTTTCTCTGTATCTATGTCAGCAGCATCTGCCATATGCAGTTTAAACCTACTTACACTGTTGGAAGCAGAAATCAGAAGTACAGATGATACCCTTGTAACTTTAAGTGTTTTCGAGCTGCTCTATGAGCTAGCAGAGGTTGAGCATGGTACAGAATTTTTGTCAAAGACGAGCCTCTTTCAACTGCTTTCATCAATAATTAGCGACGATTTCAAGGATTCAATTTTAAGATCAAGAGCAATGATGATAAGTGGAAGGCTACTATCCAAGGAAAATACATACTCCTTCATAGATGAACCATGTGCTAAAATTGTTATTTCATCCATTGAGGGTAGACTTCAGTCCTTGGACCCTTCAAATAAAGATGAATTTGAAACTGCACTTGAATCGTTGGGTCAAATAGGATTAAGTAAGTATGTTGTATTATGA
Protein sequence

>MsG0880044393.01.T01

MDEQSSQQLLQAATDFANYPGSHSDDSATDFLNRFPLPLIINALHTQFDVPGLQTTLVLCLERLFKTKFGASLIPQYMQFVQVGLQADSQAVRSLACKIVTSLLENLDNSYTVAAHLIKEFNIYPLLLDCLINGNEEVAAGAIDAIKKLASFSEGLDIIFPSTKGGDTDLGIIASQCSSLGRVRVLALVVKLFSVSMSAASAICSLNLLTLLEAEIRSTDDTLVTLSVFELLYELAEVEHGTEFLSKTSLFQLLSSIISDDFKDSILRSRAMMISGRLLSKENTYSFIDEPCAKIVISSIEGRLQSLDPSNKDEFETALESLGQIGLSKYVVL*