AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044458.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044458.01.T01 MTR_8g463890 95.955 445 16 1 1 443 1 445 0.0 839
MsG0880044458.01.T01 MTR_4g088010 48.387 341 126 10 9 338 4 305 3.18e-91 280
MsG0880044458.01.T01 MTR_5g088220 47.706 218 109 2 33 246 125 341 1.86e-61 207
MsG0880044458.01.T01 MTR_7g088140 47.556 225 106 2 33 246 87 310 2.45e-61 207
MsG0880044458.01.T01 MTR_7g088140 47.556 225 106 2 33 246 87 310 1.61e-60 205
MsG0880044458.01.T01 MTR_1g073690 30.481 187 116 2 69 241 2 188 9.96e-24 103
MsG0880044458.01.T01 MTR_5g097580 30.508 177 113 3 74 241 7 182 3.56e-22 99.4
MsG0880044458.01.T01 MTR_5g097580 30.508 177 113 3 74 241 7 182 4.01e-22 99.0
MsG0880044458.01.T01 MTR_3g055990 28.814 177 116 2 74 241 7 182 3.96e-21 95.9
MsG0880044458.01.T01 MTR_3g055990 29.775 178 113 3 74 241 7 182 4.25e-21 95.9
MsG0880044458.01.T01 MTR_5g017280 30.769 156 104 2 70 225 1 152 5.50e-19 89.0
MsG0880044458.01.T01 MTR_8g024520 48.193 83 43 0 69 151 21 103 6.02e-19 87.0
MsG0880044458.01.T01 MTR_8g024520 48.193 83 43 0 69 151 21 103 6.21e-19 87.0
MsG0880044458.01.T01 MTR_5g017280 30.769 156 104 2 70 225 1 152 6.68e-19 88.2
MsG0880044458.01.T01 MTR_4g035310 46.988 83 44 0 69 151 12 94 1.75e-18 85.5
MsG0880044458.01.T01 MTR_4g035310 46.988 83 44 0 69 151 12 94 2.17e-18 85.1
MsG0880044458.01.T01 MTR_2g026180 25.753 365 228 13 74 401 5 363 2.37e-18 87.4
MsG0880044458.01.T01 MTR_3g116130 46.429 84 45 0 69 152 25 108 2.64e-18 85.1
MsG0880044458.01.T01 MTR_3g082650 27.976 168 116 2 74 240 19 182 3.60e-18 85.9
MsG0880044458.01.T01 MTR_3g092490 46.250 80 43 0 69 148 22 101 8.85e-18 81.3
MsG0880044458.01.T01 MTR_3g092490 46.250 80 43 0 69 148 22 101 1.71e-17 82.0
MsG0880044458.01.T01 MTR_3g092490 46.250 80 43 0 69 148 22 101 1.77e-17 82.0
MsG0880044458.01.T01 MTR_5g064120 44.444 81 45 0 69 149 12 92 2.69e-17 82.4
MsG0880044458.01.T01 MTR_7g117495 45.783 83 45 0 69 151 14 96 2.71e-17 81.6
MsG0880044458.01.T01 MTR_7g117495 37.079 89 56 0 152 240 5 93 3.06e-12 67.0
MsG0880044458.01.T01 MTR_7g117495 45.783 83 45 0 69 151 14 96 2.76e-17 81.6
MsG0880044458.01.T01 MTR_7g117495 37.079 89 56 0 152 240 5 93 4.41e-12 66.6
MsG0880044458.01.T01 MTR_3g116130 46.429 84 45 0 69 152 25 108 2.99e-17 83.6
MsG0880044458.01.T01 MTR_6g004810 29.412 170 111 5 74 240 46 209 2.83e-16 80.5
MsG0880044458.01.T01 MTR_3g103420 23.936 188 128 2 69 241 6 193 2.87e-14 74.3
MsG0880044458.01.T01 MTR_7g013730 35.714 112 57 3 47 148 10 116 2.31e-13 70.1
MsG0880044458.01.T01 MTR_7g105260 42.553 94 47 2 56 148 21 108 7.22e-13 66.2
MsG0880044458.01.T01 MTR_4g104470 31.373 153 103 2 74 224 123 275 1.75e-12 68.2
MsG0880044458.01.T01 MTR_1g097440 27.778 252 153 9 44 279 182 420 1.30e-11 67.0
MsG0880044458.01.T01 MTR_3g084040 42.667 75 38 1 70 144 33 102 1.53e-11 61.2
MsG0880044458.01.T01 MTR_4g109540 37.755 98 51 2 43 132 6 101 2.03e-11 64.7
MsG0880044458.01.T01 MTR_3g084040 43.056 72 41 0 70 141 33 104 2.68e-11 62.0
MsG0880044458.01.T01 MTR_3g075500 30.286 175 112 4 74 240 110 282 4.07e-11 63.9
MsG0880044458.01.T01 MTR_6g040070 30.061 163 99 4 75 224 107 267 8.30e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044458.01.T01 AT3G15010 62.540 315 99 6 5 311 1 304 3.32e-122 362
MsG0880044458.01.T01 AT3G15010 62.540 315 99 6 5 311 1 304 3.32e-122 362
MsG0880044458.01.T01 AT2G41060 50.000 220 102 2 35 247 90 308 4.95e-64 213
MsG0880044458.01.T01 AT2G41060 50.000 220 102 2 35 247 90 308 4.95e-64 213
MsG0880044458.01.T01 AT2G41060 50.000 220 102 2 35 247 90 308 4.95e-64 213
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT3G56860 45.798 238 112 3 33 254 100 336 8.18e-61 205
MsG0880044458.01.T01 AT2G22090 43.846 130 73 0 26 155 57 186 1.13e-30 121
MsG0880044458.01.T01 AT2G22090 35.897 117 68 1 131 240 63 179 2.72e-14 74.3
MsG0880044458.01.T01 AT2G22090 43.846 130 73 0 26 155 57 186 1.42e-30 121
MsG0880044458.01.T01 AT2G22090 35.897 117 68 1 131 240 63 179 2.28e-14 74.7
MsG0880044458.01.T01 AT2G19380 39.695 131 77 1 33 161 368 498 9.83e-27 113
MsG0880044458.01.T01 AT2G19380 39.785 93 53 1 161 250 404 496 1.97e-11 66.6
MsG0880044458.01.T01 AT2G22100 40.000 135 80 1 21 154 110 244 9.21e-26 108
MsG0880044458.01.T01 AT1G17640 32.143 168 112 2 74 240 67 233 1.31e-24 105
MsG0880044458.01.T01 AT1G17640 32.143 168 112 2 74 240 67 233 1.31e-24 105
MsG0880044458.01.T01 AT1G17640 32.143 168 112 2 74 240 67 233 1.31e-24 105
MsG0880044458.01.T01 AT4G14300 27.568 185 122 4 69 241 2 186 1.22e-21 97.1
MsG0880044458.01.T01 AT4G14300 27.568 185 122 4 69 241 2 186 1.22e-21 97.1
MsG0880044458.01.T01 AT3G07810 27.374 179 118 2 74 241 7 184 2.04e-21 97.1
MsG0880044458.01.T01 AT3G07810 27.374 179 118 2 74 241 7 184 2.38e-21 96.7
MsG0880044458.01.T01 AT5G47620 25.258 194 131 3 69 251 2 192 8.66e-20 91.7
MsG0880044458.01.T01 AT5G47620 25.258 194 131 3 69 251 2 192 8.66e-20 91.7
MsG0880044458.01.T01 AT5G47620 25.258 194 131 3 69 251 2 192 8.66e-20 91.7
MsG0880044458.01.T01 AT1G22330 48.193 83 43 0 69 151 13 95 8.98e-20 89.7
MsG0880044458.01.T01 AT1G20880 48.235 85 44 0 69 153 20 104 7.50e-19 86.7
MsG0880044458.01.T01 AT1G20880 32.979 94 63 0 147 240 6 99 3.56e-11 63.9
MsG0880044458.01.T01 AT1G20880 48.235 85 44 0 69 153 20 104 7.50e-19 86.7
MsG0880044458.01.T01 AT1G20880 32.979 94 63 0 147 240 6 99 3.56e-11 63.9
MsG0880044458.01.T01 AT1G20880 48.235 85 44 0 69 153 20 104 7.50e-19 86.7
MsG0880044458.01.T01 AT1G20880 32.979 94 63 0 147 240 6 99 3.56e-11 63.9
MsG0880044458.01.T01 AT1G76460 49.398 83 42 0 69 151 20 102 9.25e-19 86.7
MsG0880044458.01.T01 AT1G76460 36.471 85 54 0 156 240 15 99 1.92e-11 65.1
MsG0880044458.01.T01 AT1G78260 46.914 81 43 0 69 149 13 93 1.10e-18 86.7
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.37e-18 88.2
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.37e-18 88.2
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.37e-18 88.2
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.37e-18 88.2
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.37e-18 88.2
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.86e-18 87.8
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.86e-18 87.8
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.86e-18 87.8
MsG0880044458.01.T01 AT5G55550 25.967 181 120 2 74 241 7 186 1.86e-18 87.8
MsG0880044458.01.T01 AT3G13224 29.299 157 107 3 70 225 7 160 3.01e-18 86.3
MsG0880044458.01.T01 AT1G78260 46.914 81 43 0 69 149 13 93 4.24e-18 84.3
MsG0880044458.01.T01 AT4G24770 32.353 170 112 3 74 240 151 320 6.25e-18 85.1
MsG0880044458.01.T01 AT4G24770 32.353 170 112 3 74 240 151 320 6.25e-18 85.1
MsG0880044458.01.T01 AT1G33470 45.783 83 45 0 69 151 3 85 6.92e-18 83.2
MsG0880044458.01.T01 AT1G33470 45.783 83 45 0 69 151 3 85 6.95e-18 83.2
MsG0880044458.01.T01 AT1G33470 45.783 83 45 0 69 151 3 85 6.97e-18 83.2
MsG0880044458.01.T01 AT5G47620 23.611 216 129 4 69 251 2 214 7.33e-18 85.9
MsG0880044458.01.T01 AT3G13224 29.412 153 104 3 74 225 20 169 9.35e-18 84.7
MsG0880044458.01.T01 AT4G26650 24.082 245 153 6 74 294 13 248 1.02e-17 85.5
MsG0880044458.01.T01 AT4G26650 24.082 245 153 6 74 294 16 251 1.06e-17 85.5
MsG0880044458.01.T01 AT2G46780 44.578 83 46 0 69 151 18 100 6.43e-17 82.0
MsG0880044458.01.T01 AT2G46780 44.578 83 46 0 69 151 18 100 6.43e-17 82.0
MsG0880044458.01.T01 AT1G22910 44.578 83 46 0 69 151 9 91 7.86e-17 80.1
MsG0880044458.01.T01 AT1G22910 44.578 83 46 0 69 151 9 91 1.00e-16 80.1
MsG0880044458.01.T01 AT3G13224 29.677 155 101 3 74 225 20 169 6.84e-16 77.4
MsG0880044458.01.T01 AT1G22910 44.578 83 46 0 69 151 9 91 1.76e-15 77.8
MsG0880044458.01.T01 AT5G53720 43.678 87 49 0 65 151 1 87 1.95e-15 72.4
MsG0880044458.01.T01 AT4G36960 31.206 141 91 3 73 211 3 139 2.17e-15 77.8
MsG0880044458.01.T01 AT4G36960 31.206 141 91 3 73 211 3 139 2.17e-15 77.8
MsG0880044458.01.T01 AT5G40490 26.786 168 118 2 74 240 43 206 2.69e-15 77.8
MsG0880044458.01.T01 AT5G53680 36.697 109 61 1 69 177 9 109 3.75e-15 73.6
MsG0880044458.01.T01 AT5G50250 31.765 170 113 3 74 240 114 283 8.68e-15 75.1
MsG0880044458.01.T01 AT3G54770 42.169 83 48 0 69 151 13 95 2.56e-14 73.2
MsG0880044458.01.T01 AT3G54770 42.169 83 48 0 69 151 13 95 3.41e-14 72.8
MsG0880044458.01.T01 AT1G58470 24.876 201 129 2 69 247 2 202 1.51e-13 72.0
MsG0880044458.01.T01 AT1G58470 24.876 201 129 2 69 247 2 202 1.51e-13 72.0
MsG0880044458.01.T01 AT2G18830 52.459 61 23 1 5 59 1 61 2.84e-13 65.1
MsG0880044458.01.T01 AT5G11412 38.710 93 55 1 61 151 38 130 5.08e-13 67.8
MsG0880044458.01.T01 AT4G34110 26.667 225 122 8 75 276 217 421 1.23e-12 70.5
MsG0880044458.01.T01 AT5G55550 21.397 229 117 4 74 241 7 233 3.12e-12 68.9
MsG0880044458.01.T01 AT5G55550 21.397 229 117 4 74 241 7 233 3.92e-12 68.6
MsG0880044458.01.T01 AT5G06210 41.975 81 46 1 74 153 35 115 8.40e-12 63.2
MsG0880044458.01.T01 AT3G06970 39.759 83 50 0 69 151 8 90 1.34e-11 65.9
MsG0880044458.01.T01 AT3G26420 41.026 78 41 2 74 148 8 83 2.21e-11 64.3
MsG0880044458.01.T01 AT5G40490 26.316 133 94 1 93 225 45 173 4.12e-11 65.1
MsG0880044458.01.T01 AT3G23830 39.535 86 51 1 74 158 36 121 4.64e-11 60.8
MsG0880044458.01.T01 AT3G23830 39.535 86 51 1 74 158 36 121 4.64e-11 60.8
MsG0880044458.01.T01 AT3G46020 38.043 92 53 2 74 161 8 99 6.05e-11 59.7
MsG0880044458.01.T01 AT1G71770 28.758 153 105 3 75 225 148 298 6.09e-11 65.1
MsG0880044458.01.T01 AT1G71770 28.758 153 105 3 75 225 148 298 6.09e-11 65.1

Find 229 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGCCCACTTCTCAATTTA+TGG 0.105100 8:-42407434 MsG0880044458.01.T01:CDS
GAAGAGAGCTGACAGGATTT+AGG 0.157988 8:-42408046 MsG0880044458.01.T01:five_prime_UTR
TTGGGGATGGCTCCTGCAGC+TGG 0.165075 8:-42407176 MsG0880044458.01.T01:CDS
CTGGCTGCAGCAGGGAATTC+AGG 0.209476 8:-42407539 MsG0880044458.01.T01:CDS
GGGTATGGTGGTGGTCATTA+TGG 0.218292 8:-42406984 MsG0880044458.01.T01:CDS
TTTGTCTTCTGTTGGGAATC+AGG 0.230236 8:-42407033 MsG0880044458.01.T01:CDS
AATTATATGCTCATGGATTA+TGG 0.233260 8:-42404879 MsG0880044458.01.T01:three_prime_UTR
CTTCCGAAGGGGAGAGCTTT+AGG 0.261140 8:+42407906 None:intergenic
CGCAGATCTTTGTGTGCTTC+TGG 0.272473 8:-42405083 MsG0880044458.01.T01:three_prime_UTR
GCCGTAACCCTTTGACTTCC+CGG 0.294511 8:+42407649 None:intergenic
AAGAGAGCTGACAGGATTTA+GGG 0.305599 8:-42408045 MsG0880044458.01.T01:five_prime_UTR
AATTCCAATGCAAACGATAA+TGG 0.313747 8:-42407984 MsG0880044458.01.T01:exon
TGAAATCAACAGGCTGTAAA+AGG 0.318527 8:+42405007 None:intergenic
TAGGCTCACGGAGAGCTAAT+AGG 0.324402 8:+42407597 None:intergenic
TAGCCCACTTCTCAATTTAT+GGG 0.325405 8:-42407433 MsG0880044458.01.T01:CDS
TTGCCAGCTTGCAATTTAAC+TGG 0.327163 8:+42407279 None:intergenic
GGTGGAGCTGGTGGGTATGG+TGG 0.330580 8:-42406996 MsG0880044458.01.T01:CDS
CAGGAAGAAAACATCAAATA+AGG 0.346199 8:+42404778 None:intergenic
AGCTGACAGGATTTAGGGTT+AGG 0.347846 8:-42408040 MsG0880044458.01.T01:five_prime_UTR
GGAGCTGGTGGGTATGGTGG+TGG 0.349772 8:-42406993 MsG0880044458.01.T01:CDS
TCTTTATCCGCGGCCTCGGT+TGG 0.351454 8:-42407754 MsG0880044458.01.T01:CDS
TCCACCACCGGCTCCTGCAT+TGG 0.351649 8:+42406878 None:intergenic
CCTGCAGCTGGGCCTGCGTC+GGG 0.357039 8:-42407164 MsG0880044458.01.T01:CDS
TTGTACAGATTACCAAGTTC+AGG 0.360751 8:-42406813 MsG0880044458.01.T01:CDS
GTCACGCAGCTGGCTGCAGC+AGG 0.366574 8:-42407548 MsG0880044458.01.T01:CDS
TCCTGCAGCTGGGCCTGCGT+CGG 0.369496 8:-42407165 MsG0880044458.01.T01:CDS
GGGCCTGCGTCGGGTCAATA+TGG 0.376107 8:-42407155 MsG0880044458.01.T01:CDS
GGGCCAGCGGCGACTGGCTA+TGG 0.376252 8:-42406951 MsG0880044458.01.T01:CDS
GGGATGCGGGGTGGCCCGGA+CGG 0.376391 8:-42407233 MsG0880044458.01.T01:CDS
GGATGCGGGGTGGCCCGGAC+GGG 0.378272 8:-42407232 MsG0880044458.01.T01:CDS
GGTGGTCATTATGGAGGTTA+TGG 0.382684 8:-42406975 MsG0880044458.01.T01:CDS
CCGTCTTCAATGGGTGGAGC+TGG 0.384511 8:-42407008 MsG0880044458.01.T01:CDS
CCACCACCGGCTCCTGCATT+GGG 0.385802 8:+42406879 None:intergenic
CCGGACGGGGCTCAGGTTCG+TGG 0.389545 8:-42407218 MsG0880044458.01.T01:CDS
GATGCGGGGTGGCCCGGACG+GGG 0.395230 8:-42407231 MsG0880044458.01.T01:CDS
GGGTGGCCCGGACGGGGCTC+AGG 0.395270 8:-42407225 MsG0880044458.01.T01:CDS
TCAAAATTACCTTAGTAGTA+AGG 0.396132 8:+42406657 None:intergenic
ATATGGTGCTTCTGTGGGTA+TGG 0.399303 8:-42407138 MsG0880044458.01.T01:CDS
CATGGTTCTGCTGGAGGTAG+TGG 0.400004 8:-42406855 MsG0880044458.01.T01:CDS
TGGGGATGGCTCCTGCAGCT+GGG 0.400986 8:-42407175 MsG0880044458.01.T01:CDS
GGCGGTGGTTTGTCTTCTGT+TGG 0.402469 8:-42407041 MsG0880044458.01.T01:CDS
ATGGGTGGAGCTGGTGGGTA+TGG 0.406373 8:-42406999 MsG0880044458.01.T01:CDS
ATCAGCTTGCGGCCTTCCGA+AGG 0.407782 8:+42407893 None:intergenic
AGCTTGTCCCCTGGAAGATC+TGG 0.410978 8:+42407458 None:intergenic
CGTGGGAATGCTCATGGAAA+TGG 0.411984 8:-42407200 MsG0880044458.01.T01:CDS
GCAAGGGATGCGGGGTGGCC+CGG 0.413420 8:-42407237 MsG0880044458.01.T01:CDS
GGTGGTTATGGCGGAGGTAG+TGG 0.413873 8:-42406912 MsG0880044458.01.T01:CDS
TGGGAAACAGCAAGGGATGC+GGG 0.418761 8:-42407246 MsG0880044458.01.T01:CDS
AACGTGCCGCCAGATCTTCC+AGG 0.422036 8:-42407467 MsG0880044458.01.T01:CDS
GATGGCGGACGACGGCGTCT+TGG 0.423007 8:+42407834 None:intergenic
GTCTGCTTATCAAAGCCTAA+TGG 0.425149 8:+42407395 None:intergenic
GAGATTGAGGAAGGTCCATT+AGG 0.426127 8:-42407410 MsG0880044458.01.T01:CDS
CTTTATCCGCGGCCTCGGTT+GGG 0.429574 8:-42407753 MsG0880044458.01.T01:CDS
CCCAATGCAGGAGCCGGTGG+TGG 0.431926 8:-42406879 MsG0880044458.01.T01:CDS
AATGCTCATGGAAATGGATT+GGG 0.432178 8:-42407194 MsG0880044458.01.T01:CDS
GAGCCTAGCAAGCGTATTGA+TGG 0.433618 8:-42407581 MsG0880044458.01.T01:CDS
AAGCTGGACGAGAACGGCTT+CGG 0.433886 8:-42407944 MsG0880044458.01.T01:CDS
CCCGACGCAGGCCCAGCTGC+AGG 0.435063 8:+42407164 None:intergenic
AGCTTGCGTCGGGAGATGTC+TGG 0.436074 8:+42407776 None:intergenic
CCACGAACCTGAGCCCCGTC+CGG 0.437828 8:+42407218 None:intergenic
GAATCAGGCTCCGTCTTCAA+TGG 0.440618 8:-42407018 MsG0880044458.01.T01:CDS
TATGGTGGGCCAGCGGCGAC+TGG 0.442593 8:-42406957 MsG0880044458.01.T01:CDS
GGCTATGGCGGTAGTGGTGG+TGG 0.444760 8:-42406936 MsG0880044458.01.T01:CDS
TTTGCATTGGAATTTAGAAA+AGG 0.444871 8:+42407993 None:intergenic
AGCCATCGTCATCGTGGATA+AGG 0.448451 8:-42407675 MsG0880044458.01.T01:CDS
CCTTTGAATTCGTCTGTTGG+CGG 0.448705 8:-42407059 MsG0880044458.01.T01:CDS
AGGCTCACGGAGAGCTAATA+GGG 0.451322 8:+42407598 None:intergenic
TCAGGTGTATCATCGCTTGT+TGG 0.451906 8:-42405107 MsG0880044458.01.T01:intron
CTTGGAGGATGTTGATTAGC+TGG 0.453892 8:+42407852 None:intergenic
AAGCTCTTTATCCGCGGCCT+CGG 0.455879 8:-42407758 MsG0880044458.01.T01:CDS
CACGAACCTGAGCCCCGTCC+GGG 0.457873 8:+42407219 None:intergenic
CTGGAGCGTCGCCGGTACCA+AGG 0.458038 8:-42406713 MsG0880044458.01.T01:CDS
CTCAATTTATGGGGAGATTG+AGG 0.460270 8:-42407423 MsG0880044458.01.T01:CDS
GGCGGTAGTGGTGGTGGTGG+TGG 0.462528 8:-42406930 MsG0880044458.01.T01:CDS
GCTTGCATTCCACCTGAACT+TGG 0.462534 8:+42406801 None:intergenic
CAGGTGTATCATCGCTTGTT+GGG 0.464273 8:-42405106 MsG0880044458.01.T01:three_prime_UTR
TGAACGGAGGCCTTCGGTGG+TGG 0.468261 8:+42407727 None:intergenic
TTGCATTGGAATTTAGAAAA+GGG 0.470771 8:+42407994 None:intergenic
AATCAGCATCATCCTCCTGC+TGG 0.470895 8:-42406732 MsG0880044458.01.T01:CDS
GCAGGAGGATGATGCTGATT+CGG 0.472230 8:+42406735 None:intergenic
GGTCATTATGGAGGTTATGG+TGG 0.473490 8:-42406972 MsG0880044458.01.T01:CDS
TCCTCCTGCTGGAGCGTCGC+CGG 0.475246 8:-42406721 MsG0880044458.01.T01:CDS
AAGGGGCAGATGAAATCAAC+AGG 0.476702 8:+42404997 None:intergenic
GCTGGAGGTAGTGGTGGACT+TGG 0.477119 8:-42406846 MsG0880044458.01.T01:CDS
GTGGGAAACAGCAAGGGATG+CGG 0.478080 8:-42407247 MsG0880044458.01.T01:CDS
ATGGAACCAGGTTGAGCCCT+TGG 0.478476 8:+42406696 None:intergenic
GGATCCATTATCGTTTGCAT+TGG 0.479231 8:+42407980 None:intergenic
GGTGTGACGGGTCCCAATGC+AGG 0.480900 8:-42406891 MsG0880044458.01.T01:CDS
ACCGGGAAGTCAAAGGGTTA+CGG 0.485097 8:-42407650 MsG0880044458.01.T01:CDS
GGTGGTGGACATGGTTCTGC+TGG 0.485141 8:-42406864 MsG0880044458.01.T01:CDS
GGGAAACAGCAAGGGATGCG+GGG 0.488613 8:-42407245 MsG0880044458.01.T01:CDS
GGCGGACGACGGCGTCTTGG+AGG 0.489426 8:+42407837 None:intergenic
TTGAATTCGTCTGTTGGCGG+TGG 0.489968 8:-42407056 MsG0880044458.01.T01:CDS
GCGGTGGTTTGTCTTCTGTT+GGG 0.490255 8:-42407040 MsG0880044458.01.T01:CDS
GAATGCTCATGGAAATGGAT+TGG 0.491254 8:-42407195 MsG0880044458.01.T01:CDS
CCGCCATAGCCAGTCGCCGC+TGG 0.491845 8:+42406948 None:intergenic
GCGCGTTACTGTCACGCAGC+TGG 0.493704 8:-42407558 MsG0880044458.01.T01:CDS
GAATTATAGTGTCCACTGTC+GGG 0.493893 8:+42406768 None:intergenic
GCTGACAGGATTTAGGGTTA+GGG 0.496148 8:-42408039 MsG0880044458.01.T01:five_prime_UTR
CGAGCGGCGGAGAGAACGTC+GGG 0.496979 8:+42407812 None:intergenic
GGGTCAATATGGTGCTTCTG+TGG 0.498259 8:-42407144 MsG0880044458.01.T01:CDS
GCGACTGGCTATGGCGGTAG+TGG 0.500152 8:-42406942 MsG0880044458.01.T01:CDS
TGGTGTCCCAACCGAGGCCG+CGG 0.500925 8:+42407747 None:intergenic
CAGGTTCGTGGGAATGCTCA+TGG 0.501345 8:-42407206 MsG0880044458.01.T01:CDS
TGGGTATGGGTTCTTACGGT+GGG 0.501812 8:-42407124 MsG0880044458.01.T01:CDS
ACTGGCTATGGCGGTAGTGG+TGG 0.503118 8:-42406939 MsG0880044458.01.T01:CDS
GTGGGTATGGGTTCTTACGG+TGG 0.503190 8:-42407125 MsG0880044458.01.T01:CDS
CCAGGTTGAGCCCTTGGTAC+CGG 0.504655 8:+42406702 None:intergenic
CATCCTTTGAATTCGTCTGT+TGG 0.506402 8:-42407062 MsG0880044458.01.T01:CDS
TCTTCAATGGGTGGAGCTGG+TGG 0.507660 8:-42407005 MsG0880044458.01.T01:CDS
GCGGATAAAGAGCTTGCGTC+GGG 0.507738 8:+42407766 None:intergenic
AATGTGCCTCCTTACTACTA+AGG 0.509044 8:-42406666 MsG0880044458.01.T01:intron
AATCAGGCTCCGTCTTCAAT+GGG 0.509124 8:-42407017 MsG0880044458.01.T01:CDS
ACGGGTCCCAATGCAGGAGC+CGG 0.511330 8:-42406885 MsG0880044458.01.T01:CDS
TCACCTAAAGCTCTCCCCTT+CGG 0.514350 8:-42407909 MsG0880044458.01.T01:CDS
GTCATCGTGGATAAGGCCAC+CGG 0.518006 8:-42407668 MsG0880044458.01.T01:CDS
AAAGAGTGAACGGAGGCCTT+CGG 0.518527 8:+42407721 None:intergenic
GGCGGAGGTAGTGGTGTGAC+GGG 0.519846 8:-42406903 MsG0880044458.01.T01:CDS
GCAGGAGCCGGTGGTGGACA+TGG 0.520167 8:-42406873 MsG0880044458.01.T01:CDS
GTCATTATGGAGGTTATGGT+GGG 0.521257 8:-42406971 MsG0880044458.01.T01:CDS
TATGGTGCTTCTGTGGGTAT+GGG 0.521331 8:-42407137 MsG0880044458.01.T01:CDS
GCTTGCGTCGGGAGATGTCT+GGG 0.522093 8:+42407777 None:intergenic
TCAGCTTGCGGCCTTCCGAA+GGG 0.523358 8:+42407894 None:intergenic
CTGGACGAGAACGGCTTCGG+CGG 0.525989 8:-42407941 MsG0880044458.01.T01:CDS
GGTGGTGGTGGTTATGGCGG+AGG 0.526234 8:-42406918 MsG0880044458.01.T01:CDS
TATGGCGGTAGTGGTGGTGG+TGG 0.526459 8:-42406933 MsG0880044458.01.T01:CDS
TGGCGGAGGTAGTGGTGTGA+CGG 0.527697 8:-42406904 MsG0880044458.01.T01:CDS
TTCAAAGGATGGTTACCCAT+TGG 0.529449 8:+42407074 None:intergenic
AAAGGATGGTTACCCATTGG+AGG 0.531954 8:+42407077 None:intergenic
CCAGAGTGAAGAGAGCTGAC+AGG 0.531975 8:-42408053 MsG0880044458.01.T01:five_prime_UTR
AGCAGAACCATGTCCACCAC+CGG 0.533518 8:+42406866 None:intergenic
AGGAGGCACATTTGAATACA+TGG 0.534369 8:+42406677 None:intergenic
CTCCCCATAAATTGAGAAGT+GGG 0.534593 8:+42407430 None:intergenic
CAGTGGACACTATAATTCAT+CGG 0.536113 8:-42406763 MsG0880044458.01.T01:CDS
GCATCAGGGTCAGCCTCCAA+TGG 0.539224 8:-42407090 MsG0880044458.01.T01:CDS
TAAGGCCACCGGGAAGTCAA+AGG 0.540644 8:-42407657 MsG0880044458.01.T01:CDS
CGCCCATCAATACGCTTGCT+AGG 0.541641 8:+42407578 None:intergenic
CCTGTCAGCTCTCTTCACTC+TGG 0.545737 8:+42408053 None:intergenic
AGTGGACACTATAATTCATC+GGG 0.545806 8:-42406762 MsG0880044458.01.T01:CDS
TATGGTGGTGGTCATTATGG+AGG 0.546629 8:-42406981 MsG0880044458.01.T01:CDS
CATCAGGGTCAGCCTCCAAT+GGG 0.546784 8:-42407089 MsG0880044458.01.T01:CDS
ATTGTACAGCTAAAGTGATC+CGG 0.551317 8:+42404909 None:intergenic
TGGAGCGTCGCCGGTACCAA+GGG 0.557240 8:-42406712 MsG0880044458.01.T01:CDS
AGTTCAGGTGGAATGCAAGC+TGG 0.557581 8:-42406798 MsG0880044458.01.T01:CDS
GAGGATGTTGATTAGCTGGT+CGG 0.560471 8:+42407856 None:intergenic
CTTCAATGGGTGGAGCTGGT+GGG 0.560729 8:-42407004 MsG0880044458.01.T01:CDS
TGAATTATAGTGTCCACTGT+CGG 0.561041 8:+42406767 None:intergenic
AAGCGCAAGCTGGACGAGAA+CGG 0.562609 8:-42407950 MsG0880044458.01.T01:CDS
TTTGTTTATAAGACACCTGA+GGG 0.564788 8:-42407347 MsG0880044458.01.T01:CDS
TTATTGCAGACTATGTGCTC+TGG 0.565078 8:-42405052 MsG0880044458.01.T01:three_prime_UTR
GTAACCTTCCTCCACGTGGA+CGG 0.565258 8:-42407623 MsG0880044458.01.T01:CDS
TTAGGCTTTGATAAGCAGAC+AGG 0.565816 8:-42407392 MsG0880044458.01.T01:CDS
GTCTGCAACTGCACGAGCGG+CGG 0.568107 8:+42407799 None:intergenic
GGTACCGGCGACGCTCCAGC+AGG 0.568354 8:+42406717 None:intergenic
GGTTCTGCTGGAGGTAGTGG+TGG 0.569029 8:-42406852 MsG0880044458.01.T01:CDS
CCAGCTCCACCCATTGAAGA+CGG 0.571362 8:+42407008 None:intergenic
GGTCAATATGGTGCTTCTGT+GGG 0.572422 8:-42407143 MsG0880044458.01.T01:CDS
ACGTGCCGCCAGATCTTCCA+GGG 0.572719 8:-42407466 MsG0880044458.01.T01:CDS
GGCTTCTTCGAGTTCACCGT+AGG 0.573126 8:+42407694 None:intergenic
TGGGCTAGAAGCTTGTCCCC+TGG 0.573290 8:+42407449 None:intergenic
ACAGATGGTGGGAAACAGCA+AGG 0.578355 8:-42407254 MsG0880044458.01.T01:CDS
GGTCCCAATGCAGGAGCCGG+TGG 0.578894 8:-42406882 MsG0880044458.01.T01:CDS
AGCCCACTTCTCAATTTATG+GGG 0.579162 8:-42407432 MsG0880044458.01.T01:CDS
CCGGTACCAAGGGCTCAACC+TGG 0.580365 8:-42406702 MsG0880044458.01.T01:CDS
CGCGGATAAAGAGCTTGCGT+CGG 0.580749 8:+42407765 None:intergenic
TCTGTGGGTATGGGTTCTTA+CGG 0.581079 8:-42407128 MsG0880044458.01.T01:CDS
AGCCTAGCAAGCGTATTGAT+GGG 0.581549 8:-42407580 MsG0880044458.01.T01:CDS
TCACGCAGCTGGCTGCAGCA+GGG 0.584544 8:-42407547 MsG0880044458.01.T01:CDS
AACGTCAGCTGCGTTAGTGT+TGG 0.584961 8:+42407514 None:intergenic
ATGCTCATGGAAATGGATTG+GGG 0.587956 8:-42407193 MsG0880044458.01.T01:CDS
CCAGCGGCGACTGGCTATGG+CGG 0.589359 8:-42406948 MsG0880044458.01.T01:CDS
GCGCCAGTTAAATTGCAAGC+TGG 0.589565 8:-42407282 MsG0880044458.01.T01:CDS
AAGGCCACCGGGAAGTCAAA+GGG 0.590172 8:-42407656 MsG0880044458.01.T01:CDS
GGTGGACATGGTTCTGCTGG+AGG 0.591457 8:-42406861 MsG0880044458.01.T01:CDS
AAGCAGACAGGAAGATCCAA+AGG 0.594143 8:-42407380 MsG0880044458.01.T01:CDS
CAGCTTGCGGCCTTCCGAAG+GGG 0.594716 8:+42407895 None:intergenic
CGGACGGGGCTCAGGTTCGT+GGG 0.595374 8:-42407217 MsG0880044458.01.T01:CDS
TGAACTTGGTAATCTGTACA+AGG 0.597010 8:+42406815 None:intergenic
AGCTGGCAATAACAGATGGT+GGG 0.599505 8:-42407265 MsG0880044458.01.T01:CDS
AAGCTGGCAATAACAGATGG+TGG 0.599769 8:-42407266 MsG0880044458.01.T01:CDS
CGGAGAGAACGTCGGGATGG+CGG 0.599856 8:+42407819 None:intergenic
TGCAAGCTGGCAATAACAGA+TGG 0.600320 8:-42407269 MsG0880044458.01.T01:CDS
TGGAAGATCTGGCGGCACGT+TGG 0.600839 8:+42407469 None:intergenic
AGGAGAGTATAATATAACTC+AGG 0.602134 8:+42404798 None:intergenic
GGCACCGTCCACGTGGAGGA+AGG 0.602991 8:+42407619 None:intergenic
CTAAAGCTCTCCCCTTCGGA+AGG 0.603271 8:-42407905 MsG0880044458.01.T01:CDS
TCTCCCCATAAATTGAGAAG+TGG 0.605477 8:+42407429 None:intergenic
AAGAAATTATTGATAACCCA+AGG 0.606286 8:+42404821 None:intergenic
TGGGTCTGCAACTGCACGAG+CGG 0.609763 8:+42407796 None:intergenic
ATTTATGGGGAGATTGAGGA+AGG 0.610944 8:-42407419 MsG0880044458.01.T01:CDS
CGAAGAAGCCATCGTCATCG+TGG 0.611507 8:-42407681 MsG0880044458.01.T01:CDS
CTTTGTAACCTTCCTCCACG+TGG 0.614833 8:-42407627 MsG0880044458.01.T01:CDS
ACCGGCGACGCTCCAGCAGG+AGG 0.615287 8:+42406720 None:intergenic
CAGGCTCCGTCTTCAATGGG+TGG 0.615484 8:-42407014 MsG0880044458.01.T01:CDS
GCACCATATTGACCCGACGC+AGG 0.615547 8:+42407152 None:intergenic
CGGCGGAGAGAACGTCGGGA+TGG 0.615900 8:+42407816 None:intergenic
AAACAGCAAGGGATGCGGGG+TGG 0.619247 8:-42407242 MsG0880044458.01.T01:CDS
TCATGGAAATGGATTGGGGA+TGG 0.619722 8:-42407189 MsG0880044458.01.T01:CDS
TACAGATTACCAAGTTCAGG+TGG 0.619923 8:-42406810 MsG0880044458.01.T01:CDS
GAGTGAACGGAGGCCTTCGG+TGG 0.625768 8:+42407724 None:intergenic
TGTTTATAAGACACCTGAGG+GGG 0.625851 8:-42407345 MsG0880044458.01.T01:CDS
AACGTCGGGATGGCGGACGA+CGG 0.627255 8:+42407826 None:intergenic
GGTTGGGACACCACCACCGA+AGG 0.631122 8:-42407737 MsG0880044458.01.T01:CDS
CAGATGGTGGGAAACAGCAA+GGG 0.633303 8:-42407253 MsG0880044458.01.T01:CDS
CAATACGCTTGCTAGGCTCA+CGG 0.633928 8:+42407585 None:intergenic
TTGTCCCCTGGAAGATCTGG+CGG 0.635646 8:+42407461 None:intergenic
CGTAGGTTGAAAAGAGTGAA+CGG 0.636917 8:+42407711 None:intergenic
ACATTTGAATACATGGAACC+AGG 0.636995 8:+42406684 None:intergenic
CGGTGGTGGTGTCCCAACCG+AGG 0.637491 8:+42407741 None:intergenic
ACGCAGCTGACGTTGCTCAA+CGG 0.640216 8:-42407505 MsG0880044458.01.T01:CDS
CCGCCAACAGACGAATTCAA+AGG 0.642265 8:+42407059 None:intergenic
AGCAGACAGGAAGATCCAAA+GGG 0.644064 8:-42407379 MsG0880044458.01.T01:CDS
CTAATAGGGCACCGTCCACG+TGG 0.645122 8:+42407612 None:intergenic
AAATTACCTTAGTAGTAAGG+AGG 0.645378 8:+42406660 None:intergenic
CAACAGACGAATTCAAAGGA+TGG 0.645862 8:+42407063 None:intergenic
TCATCGTGGATAAGGCCACC+GGG 0.647251 8:-42407667 MsG0880044458.01.T01:CDS
TCAGGTGGAATGCAAGCTGG+TGG 0.648088 8:-42406795 MsG0880044458.01.T01:CDS
TGGAGGTTATGGTGGGCCAG+CGG 0.653063 8:-42406964 MsG0880044458.01.T01:CDS
ACGAGCGGCGGAGAGAACGT+CGG 0.656379 8:+42407811 None:intergenic
GGCCTTATCCACGATGACGA+TGG 0.661108 8:+42407673 None:intergenic
ATAGGGCACCGTCCACGTGG+AGG 0.676238 8:+42407615 None:intergenic
GCTGGTGGATATCCCGACAG+TGG 0.680938 8:-42406780 MsG0880044458.01.T01:CDS
GATGTTGATTAGCTGGTCGG+AGG 0.681248 8:+42407859 None:intergenic
GTAACCCTTTGACTTCCCGG+TGG 0.687341 8:+42407652 None:intergenic
CGACGCAAGCTCTTTATCCG+CGG 0.694366 8:-42407764 MsG0880044458.01.T01:CDS
TGAAACGCTCGATCAGCTTG+CGG 0.713235 8:+42407882 None:intergenic
CGTGCCGCCAGATCTTCCAG+GGG 0.720273 8:-42407465 MsG0880044458.01.T01:CDS
TTGTTTATAAGACACCTGAG+GGG 0.721049 8:-42407346 MsG0880044458.01.T01:CDS
AGGTTGAAAAGAGTGAACGG+AGG 0.767319 8:+42407714 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATACTTATTAACTAT+TGG + Chr8:42407207-42407226 None:intergenic 10.0%
!! AATAGTTAATAAGTATAATT+TGG - Chr8:42407206-42407225 MsG0880044458.01.T01:CDS 10.0%
!! AGAAGTTTAATAAAAAAAAA+AGG + Chr8:42406860-42406879 None:intergenic 10.0%
!! GAAGTTTAATAAAAAAAAAA+GGG + Chr8:42406859-42406878 None:intergenic 10.0%
!! ATATATATATCATTGAAAGA+TGG - Chr8:42407689-42407708 MsG0880044458.01.T01:CDS 15.0%
!! TAATAAAAAAAAAAGGGATT+CGG + Chr8:42406853-42406872 None:intergenic 15.0%
!!! AAATACATCACTTAATTTTT+TGG - Chr8:42407267-42407286 MsG0880044458.01.T01:CDS 15.0%
!!! AATACATCACTTAATTTTTT+GGG - Chr8:42407268-42407287 MsG0880044458.01.T01:CDS 15.0%
!! AATCAAAACATTTATCAATC+AGG + Chr8:42406736-42406755 None:intergenic 20.0%
!! CATCTTCAAAATTGTAATTT+GGG - Chr8:42407592-42407611 MsG0880044458.01.T01:CDS 20.0%
!! TCATCTTCAAAATTGTAATT+TGG - Chr8:42407591-42407610 MsG0880044458.01.T01:CDS 20.0%
!! TTAAAATCAAATCATAGAGA+CGG + Chr8:42407425-42407444 None:intergenic 20.0%
!! TTGTATAGTTTAATTGTTTG+TGG - Chr8:42407490-42407509 MsG0880044458.01.T01:CDS 20.0%
!!! CTCTATGATTTGATTTTAAT+CGG - Chr8:42407426-42407445 MsG0880044458.01.T01:CDS 20.0%
!!! TAAGGTAATTTTGAATTTTC+TGG - Chr8:42406208-42406227 MsG0880044458.01.T01:intron 20.0%
!!! TTTTATTATGAGTTTGTACT+TGG - Chr8:42408003-42408022 MsG0880044458.01.T01:five_prime_UTR 20.0%
! AAAAGAAATGAAAATTGCAC+TGG + Chr8:42407098-42407117 None:intergenic 25.0%
! AACAAAGAAAGTAACAAAAC+AGG + Chr8:42406931-42406950 None:intergenic 25.0%
! ACAATTAAACTATACAAGCA+AGG + Chr8:42407487-42407506 None:intergenic 25.0%
! ACTATTAACGACTTCAAATA+AGG + Chr8:42406784-42406803 None:intergenic 25.0%
! GAACAAAACATGATAAATGT+TGG + Chr8:42407361-42407380 None:intergenic 25.0%
! GAAGAACAAAACTAAGAAAA+AGG + Chr8:42406277-42406296 None:intergenic 25.0%
! GTGTACTTCATACTATTATT+TGG - Chr8:42406354-42406373 MsG0880044458.01.T01:intron 25.0%
! GTTAATAGTGAATTTGTGAT+GGG - Chr8:42406795-42406814 MsG0880044458.01.T01:CDS 25.0%
! TAAAACAAAGTGAGAGAATA+AGG + Chr8:42407167-42407186 None:intergenic 25.0%
! TCAAAATTACCTTAGTAGTA+AGG + Chr8:42406202-42406221 None:intergenic 25.0%
! TCGTCTCATTCAATAAAAAA+CGG - Chr8:42407010-42407029 MsG0880044458.01.T01:CDS 25.0%
! TGTTAAAAATAATACCACAG+TGG + Chr8:42406407-42406426 None:intergenic 25.0%
! TTCTCTCTCATTTATCATAT+TGG - Chr8:42407242-42407261 MsG0880044458.01.T01:CDS 25.0%
! TTGCATTGGAATTTAGAAAA+GGG + Chr8:42404865-42404884 None:intergenic 25.0%
! TTTGCATTGGAATTTAGAAA+AGG + Chr8:42404866-42404885 None:intergenic 25.0%
!! AACTTTTCATAACATAGACA+GGG + Chr8:42406473-42406492 None:intergenic 25.0%
!! AAGAAATTATTGATAACCCA+AGG + Chr8:42408038-42408057 None:intergenic 25.0%
!! AATTATATGCTCATGGATTA+TGG - Chr8:42407977-42407996 MsG0880044458.01.T01:CDS 25.0%
!! TGCACATATTATTGATTAGA+AGG + Chr8:42407132-42407151 None:intergenic 25.0%
!!! AAATGATGAATTGAGTTGAA+TGG - Chr8:42407717-42407736 MsG0880044458.01.T01:CDS 25.0%
!!! CTGTTTTAATTATATGCTCA+TGG - Chr8:42407970-42407989 MsG0880044458.01.T01:CDS 25.0%
!!! TGGAATAAAATCTGAAGTTT+TGG - Chr8:42407035-42407054 MsG0880044458.01.T01:CDS 25.0%
AAATTACCTTAGTAGTAAGG+AGG + Chr8:42406199-42406218 None:intergenic 30.0%
AACTAGAAGCAACAATTATC+TGG + Chr8:42407074-42407093 None:intergenic 30.0%
AATTCCAATGCAAACGATAA+TGG - Chr8:42404872-42404891 MsG0880044458.01.T01:three_prime_UTR 30.0%
ACATGGAACAAGCTTAAAAA+AGG + Chr8:42407881-42407900 None:intergenic 30.0%
ACTAGAAGCAACAATTATCT+GGG + Chr8:42407073-42407092 None:intergenic 30.0%
ATAAGGATTTATCTAGCTAC+AGG + Chr8:42406767-42406786 None:intergenic 30.0%
ATCACTGCTTATCCATTAAT+AGG + Chr8:42407642-42407661 None:intergenic 30.0%
ATGGAACAAGCTTAAAAAAG+GGG + Chr8:42407879-42407898 None:intergenic 30.0%
ATTAAACTATACAAGCAAGG+AGG + Chr8:42407484-42407503 None:intergenic 30.0%
CAGGAAGAAAACATCAAATA+AGG + Chr8:42408081-42408100 None:intergenic 30.0%
CATCTGATTATCTGATATTG+TGG - Chr8:42407452-42407471 MsG0880044458.01.T01:CDS 30.0%
CATGGAACAAGCTTAAAAAA+GGG + Chr8:42407880-42407899 None:intergenic 30.0%
CGTTAATAGTGAATTTGTGA+TGG - Chr8:42406794-42406813 MsG0880044458.01.T01:CDS 30.0%
TAAATTCCATCCTTTCAGTA+TGG - Chr8:42406821-42406840 MsG0880044458.01.T01:CDS 30.0%
TATATTCCATACTGAAAGGA+TGG + Chr8:42406830-42406849 None:intergenic 30.0%
TCATTCAATAAAAAACGGCA+TGG - Chr8:42407015-42407034 MsG0880044458.01.T01:CDS 30.0%
TTAAACTATACAAGCAAGGA+GGG + Chr8:42407483-42407502 None:intergenic 30.0%
TTATCCATTAATAGGAGGAA+CGG + Chr8:42407634-42407653 None:intergenic 30.0%
TTTGAAGATGATTTCAAGCA+AGG + Chr8:42407582-42407601 None:intergenic 30.0%
TTTGTTTATAAGACACCTGA+GGG - Chr8:42405509-42405528 MsG0880044458.01.T01:intron 30.0%
! AGGAGAGTATAATATAACTC+AGG + Chr8:42408061-42408080 None:intergenic 30.0%
! CAACTTTTCATAACATAGAC+AGG + Chr8:42406474-42406493 None:intergenic 30.0%
! GCAATTCTAAATGATAGTGT+TGG + Chr8:42406978-42406997 None:intergenic 30.0%
! TACTTGGTTACATTTTCCTT+GGG - Chr8:42408019-42408038 MsG0880044458.01.T01:five_prime_UTR 30.0%
! TGGTTTGTAACATTCTCTTT+AGG - Chr8:42406228-42406247 MsG0880044458.01.T01:intron 30.0%
!! AGCTTTTAACTAACAACACA+TGG + Chr8:42407898-42407917 None:intergenic 30.0%
!! TTTTGTTTATAAGACACCTG+AGG - Chr8:42405508-42405527 MsG0880044458.01.T01:intron 30.0%
!!! ACTAGTTTTGTACTTTTAGC+CGG - Chr8:42407928-42407947 MsG0880044458.01.T01:CDS 30.0%
!!! ACTTAATTTTTTGGGATGGA+GGG - Chr8:42407276-42407295 MsG0880044458.01.T01:CDS 30.0%
!!! CATCACTTAATTTTTTGGGA+TGG - Chr8:42407272-42407291 MsG0880044458.01.T01:CDS 30.0%
!!! GTCTTTTTTGCTCTTTTGAT+CGG - Chr8:42406577-42406596 MsG0880044458.01.T01:intron 30.0%
ACATTTGAATACATGGAACC+AGG + Chr8:42406175-42406194 None:intergenic 35.0%
ACTGCTTATCCATTAATAGG+AGG + Chr8:42407639-42407658 None:intergenic 35.0%
AGTGGACACTATAATTCATC+GGG - Chr8:42406094-42406113 MsG0880044458.01.T01:intron 35.0%
ATTGTACAGCTAAAGTGATC+CGG + Chr8:42407950-42407969 None:intergenic 35.0%
CACAAAACACAAACTATGAC+AGG + Chr8:42406499-42406518 None:intergenic 35.0%
CAGTGGACACTATAATTCAT+CGG - Chr8:42406093-42406112 MsG0880044458.01.T01:intron 35.0%
GTTGAATGGATGTTTGATTC+AGG - Chr8:42407731-42407750 MsG0880044458.01.T01:CDS 35.0%
GTTTAATTGTTTGTGGTGTG+TGG - Chr8:42407497-42407516 MsG0880044458.01.T01:CDS 35.0%
TAAACTATACAAGCAAGGAG+GGG + Chr8:42407482-42407501 None:intergenic 35.0%
TAGCCCACTTCTCAATTTAT+GGG - Chr8:42405423-42405442 MsG0880044458.01.T01:intron 35.0%
TCGGTATATTCCATACTGAA+AGG + Chr8:42406834-42406853 None:intergenic 35.0%
TGAAATCAACAGGCTGTAAA+AGG + Chr8:42407852-42407871 None:intergenic 35.0%
TGAATTATAGTGTCCACTGT+CGG + Chr8:42406092-42406111 None:intergenic 35.0%
TTGTACAGATTACCAAGTTC+AGG - Chr8:42406043-42406062 MsG0880044458.01.T01:intron 35.0%
TTGTTTATAAGACACCTGAG+GGG - Chr8:42405510-42405529 MsG0880044458.01.T01:intron 35.0%
! AATGCTCATGGAAATGGATT+GGG - Chr8:42405662-42405681 MsG0880044458.01.T01:intron 35.0%
! CAACAATTATCTGGGACAAA+GGG + Chr8:42407065-42407084 None:intergenic 35.0%
! CTATCATTTAGAATTGCGCT+AGG - Chr8:42406981-42407000 MsG0880044458.01.T01:CDS 35.0%
! GTACTTGGTTACATTTTCCT+TGG - Chr8:42408018-42408037 MsG0880044458.01.T01:five_prime_UTR 35.0%
! TGAACTTGGTAATCTGTACA+AGG + Chr8:42406044-42406063 None:intergenic 35.0%
! TTGAACATACCTGTTTGTTG+TGG - Chr8:42406675-42406694 MsG0880044458.01.T01:CDS 35.0%
!! GATGGAGGGAGTATTATTTA+TGG - Chr8:42407290-42407309 MsG0880044458.01.T01:CDS 35.0%
!!! ATTTGGGTTGTGTTTTGACA+TGG - Chr8:42407608-42407627 MsG0880044458.01.T01:CDS 35.0%
!!! ATTTTTTACGGGCTCTGATA+CGG + Chr8:42405546-42405565 None:intergenic 35.0%
!!! CACTTAATTTTTTGGGATGG+AGG - Chr8:42407275-42407294 MsG0880044458.01.T01:CDS 35.0%
AACAAAAAGAGCGAACCCTT+TGG + Chr8:42405495-42405514 None:intergenic 40.0%
AAGAGAGCTGACAGGATTTA+GGG - Chr8:42404811-42404830 MsG0880044458.01.T01:three_prime_UTR 40.0%
AATGTGCCTCCTTACTACTA+AGG - Chr8:42406190-42406209 MsG0880044458.01.T01:intron 40.0%
ACGAAACATGCACAACAAGT+AGG + Chr8:42407556-42407575 None:intergenic 40.0%
AGAGACGGCACTTAGTATTA+AGG + Chr8:42407410-42407429 None:intergenic 40.0%
AGCCCACTTCTCAATTTATG+GGG - Chr8:42405424-42405443 MsG0880044458.01.T01:intron 40.0%
ATCAGAGCCCGTAAAAAATG+TGG - Chr8:42405547-42405566 MsG0880044458.01.T01:intron 40.0%
ATTTATGGGGAGATTGAGGA+AGG - Chr8:42405437-42405456 MsG0880044458.01.T01:intron 40.0%
CAACAGACGAATTCAAAGGA+TGG + Chr8:42405796-42405815 None:intergenic 40.0%
CATCCTTTGAATTCGTCTGT+TGG - Chr8:42405794-42405813 MsG0880044458.01.T01:intron 40.0%
CTAGCCCACTTCTCAATTTA+TGG - Chr8:42405422-42405441 MsG0880044458.01.T01:intron 40.0%
CTCAATTTATGGGGAGATTG+AGG - Chr8:42405433-42405452 MsG0880044458.01.T01:intron 40.0%
CTCCCCATAAATTGAGAAGT+GGG + Chr8:42405429-42405448 None:intergenic 40.0%
GAATGCTCATGGAAATGGAT+TGG - Chr8:42405661-42405680 MsG0880044458.01.T01:intron 40.0%
GAATTATAGTGTCCACTGTC+GGG + Chr8:42406091-42406110 None:intergenic 40.0%
GGATCCATTATCGTTTGCAT+TGG + Chr8:42404879-42404898 None:intergenic 40.0%
GTCATTATGGAGGTTATGGT+GGG - Chr8:42405885-42405904 MsG0880044458.01.T01:intron 40.0%
GTCTGCTTATCAAAGCCTAA+TGG + Chr8:42405464-42405483 None:intergenic 40.0%
TACAGATTACCAAGTTCAGG+TGG - Chr8:42406046-42406065 MsG0880044458.01.T01:intron 40.0%
TACCACAGTGGAAATAATGC+AGG + Chr8:42406395-42406414 None:intergenic 40.0%
TACCTGCATTATTTCCACTG+TGG - Chr8:42406390-42406409 MsG0880044458.01.T01:intron 40.0%
TCTCCCCATAAATTGAGAAG+TGG + Chr8:42405430-42405449 None:intergenic 40.0%
TCTCTAACACCACAACAAAC+AGG + Chr8:42406687-42406706 None:intergenic 40.0%
TGTTTATAAGACACCTGAGG+GGG - Chr8:42405511-42405530 MsG0880044458.01.T01:intron 40.0%
TTACAAGACGACAAGCAAAG+AGG + Chr8:42406630-42406649 None:intergenic 40.0%
TTATTGCAGACTATGTGCTC+TGG - Chr8:42407804-42407823 MsG0880044458.01.T01:CDS 40.0%
TTCAAAGGATGGTTACCCAT+TGG + Chr8:42405785-42405804 None:intergenic 40.0%
TTGCCAGCTTGCAATTTAAC+TGG + Chr8:42405580-42405599 None:intergenic 40.0%
TTTGTCTTCTGTTGGGAATC+AGG - Chr8:42405823-42405842 MsG0880044458.01.T01:intron 40.0%
! AGGAGGCACATTTGAATACA+TGG + Chr8:42406182-42406201 None:intergenic 40.0%
! CGTAGGTTGAAAAGAGTGAA+CGG + Chr8:42405148-42405167 None:intergenic 40.0%
! CGTTCACTCTTTTCAACCTA+CGG - Chr8:42405146-42405165 MsG0880044458.01.T01:intron 40.0%
! GCAACAATTATCTGGGACAA+AGG + Chr8:42407066-42407085 None:intergenic 40.0%
! TTAGGCTTTGATAAGCAGAC+AGG - Chr8:42405464-42405483 MsG0880044458.01.T01:intron 40.0%
!! ATGCTCATGGAAATGGATTG+GGG - Chr8:42405663-42405682 MsG0880044458.01.T01:intron 40.0%
AAAGGATGGTTACCCATTGG+AGG + Chr8:42405782-42405801 None:intergenic 45.0%
AAGCAGACAGGAAGATCCAA+AGG - Chr8:42405476-42405495 MsG0880044458.01.T01:intron 45.0%
AAGCTGGCAATAACAGATGG+TGG - Chr8:42405590-42405609 MsG0880044458.01.T01:intron 45.0%
AAGGGGCAGATGAAATCAAC+AGG + Chr8:42407862-42407881 None:intergenic 45.0%
AATCAGGCTCCGTCTTCAAT+GGG - Chr8:42405839-42405858 MsG0880044458.01.T01:intron 45.0%
AGAGCCCGTAAAAAATGTGG+AGG - Chr8:42405550-42405569 MsG0880044458.01.T01:intron 45.0%
AGCAGACAGGAAGATCCAAA+GGG - Chr8:42405477-42405496 MsG0880044458.01.T01:intron 45.0%
AGCCCGTAAAAAATGTGGAG+GGG - Chr8:42405552-42405571 MsG0880044458.01.T01:intron 45.0%
AGCTGGCAATAACAGATGGT+GGG - Chr8:42405591-42405610 MsG0880044458.01.T01:intron 45.0%
AGGTTGAAAAGAGTGAACGG+AGG + Chr8:42405145-42405164 None:intergenic 45.0%
ATATGGTGCTTCTGTGGGTA+TGG - Chr8:42405718-42405737 MsG0880044458.01.T01:intron 45.0%
ATGGCCGTTCCTCCTATTAA+TGG - Chr8:42407627-42407646 MsG0880044458.01.T01:CDS 45.0%
CAGGTGTATCATCGCTTGTT+GGG - Chr8:42407750-42407769 MsG0880044458.01.T01:CDS 45.0%
CCTTTGAATTCGTCTGTTGG+CGG - Chr8:42405797-42405816 MsG0880044458.01.T01:intron 45.0%
CGACAAGCAAAGAGGTCAAA+AGG + Chr8:42406622-42406641 None:intergenic 45.0%
GAAGAGAGCTGACAGGATTT+AGG - Chr8:42404810-42404829 MsG0880044458.01.T01:three_prime_UTR 45.0%
GAGATTGAGGAAGGTCCATT+AGG - Chr8:42405446-42405465 MsG0880044458.01.T01:intron 45.0%
GAGCCCGTAAAAAATGTGGA+GGG - Chr8:42405551-42405570 MsG0880044458.01.T01:intron 45.0%
GGTCAATATGGTGCTTCTGT+GGG - Chr8:42405713-42405732 MsG0880044458.01.T01:intron 45.0%
GGTCATTATGGAGGTTATGG+TGG - Chr8:42405884-42405903 MsG0880044458.01.T01:intron 45.0%
GGTGGTCATTATGGAGGTTA+TGG - Chr8:42405881-42405900 MsG0880044458.01.T01:intron 45.0%
TATGGTGCTTCTGTGGGTAT+GGG - Chr8:42405719-42405738 MsG0880044458.01.T01:intron 45.0%
TCAGGTGTATCATCGCTTGT+TGG - Chr8:42407749-42407768 MsG0880044458.01.T01:CDS 45.0%
TCTGTGGGTATGGGTTCTTA+CGG - Chr8:42405728-42405747 MsG0880044458.01.T01:intron 45.0%
TGCAAGCTGGCAATAACAGA+TGG - Chr8:42405587-42405606 MsG0880044458.01.T01:intron 45.0%
! AGCCTAGCAAGCGTATTGAT+GGG - Chr8:42405276-42405295 MsG0880044458.01.T01:intron 45.0%
! AGCTGACAGGATTTAGGGTT+AGG - Chr8:42404816-42404835 MsG0880044458.01.T01:three_prime_UTR 45.0%
! CTTGGAGGATGTTGATTAGC+TGG + Chr8:42405007-42405026 None:intergenic 45.0%
! GAGGATGTTGATTAGCTGGT+CGG + Chr8:42405003-42405022 None:intergenic 45.0%
! GCTGACAGGATTTAGGGTTA+GGG - Chr8:42404817-42404836 MsG0880044458.01.T01:three_prime_UTR 45.0%
!! TATGGTGGTGGTCATTATGG+AGG - Chr8:42405875-42405894 MsG0880044458.01.T01:intron 45.0%
!! TCATGGAAATGGATTGGGGA+TGG - Chr8:42405667-42405686 MsG0880044458.01.T01:intron 45.0%
AAAGAGTGAACGGAGGCCTT+CGG + Chr8:42405138-42405157 None:intergenic 50.0%
AACGTCAGCTGCGTTAGTGT+TGG + Chr8:42405345-42405364 None:intergenic 50.0%
AATCAGCATCATCCTCCTGC+TGG - Chr8:42406124-42406143 MsG0880044458.01.T01:intron 50.0%
ACCGGGAAGTCAAAGGGTTA+CGG - Chr8:42405206-42405225 MsG0880044458.01.T01:intron 50.0%
AGCCATCGTCATCGTGGATA+AGG - Chr8:42405181-42405200 MsG0880044458.01.T01:intron 50.0%
AGGCTCACGGAGAGCTAATA+GGG + Chr8:42405261-42405280 None:intergenic 50.0%
AGTTCAGGTGGAATGCAAGC+TGG - Chr8:42406058-42406077 MsG0880044458.01.T01:intron 50.0%
CCGCCAACAGACGAATTCAA+AGG + Chr8:42405800-42405819 None:intergenic 50.0%
CGCAGATCTTTGTGTGCTTC+TGG - Chr8:42407773-42407792 MsG0880044458.01.T01:CDS 50.0%
CGTGGGAATGCTCATGGAAA+TGG - Chr8:42405656-42405675 MsG0880044458.01.T01:intron 50.0%
CTTTGTAACCTTCCTCCACG+TGG - Chr8:42405229-42405248 MsG0880044458.01.T01:intron 50.0%
GAATCAGGCTCCGTCTTCAA+TGG - Chr8:42405838-42405857 MsG0880044458.01.T01:intron 50.0%
GAGCCTAGCAAGCGTATTGA+TGG - Chr8:42405275-42405294 MsG0880044458.01.T01:intron 50.0%
GCGCCAGTTAAATTGCAAGC+TGG - Chr8:42405574-42405593 MsG0880044458.01.T01:intron 50.0%
GCTTGCATTCCACCTGAACT+TGG + Chr8:42406058-42406077 None:intergenic 50.0%
GGGTCAATATGGTGCTTCTG+TGG - Chr8:42405712-42405731 MsG0880044458.01.T01:intron 50.0%
TAGGCTCACGGAGAGCTAAT+AGG + Chr8:42405262-42405281 None:intergenic 50.0%
TCACCTAAAGCTCTCCCCTT+CGG - Chr8:42404947-42404966 MsG0880044458.01.T01:three_prime_UTR 50.0%
TGAAACGCTCGATCAGCTTG+CGG + Chr8:42404977-42404996 None:intergenic 50.0%
TGGGTATGGGTTCTTACGGT+GGG - Chr8:42405732-42405751 MsG0880044458.01.T01:intron 50.0%
TTGAATTCGTCTGTTGGCGG+TGG - Chr8:42405800-42405819 MsG0880044458.01.T01:intron 50.0%
! CAATACGCTTGCTAGGCTCA+CGG + Chr8:42405274-42405293 None:intergenic 50.0%
! GATGTTGATTAGCTGGTCGG+AGG + Chr8:42405000-42405019 None:intergenic 50.0%
! GCAGGAGGATGATGCTGATT+CGG + Chr8:42406124-42406143 None:intergenic 50.0%
! GCGGTGGTTTGTCTTCTGTT+GGG - Chr8:42405816-42405835 MsG0880044458.01.T01:intron 50.0%
!! ACAGATGGTGGGAAACAGCA+AGG - Chr8:42405602-42405621 MsG0880044458.01.T01:intron 50.0%
!! CAGATGGTGGGAAACAGCAA+GGG - Chr8:42405603-42405622 MsG0880044458.01.T01:intron 50.0%
!! CTTACGGTGGGTTTTCTGCT+GGG - Chr8:42405744-42405763 MsG0880044458.01.T01:intron 50.0%
!! GGGTATGGTGGTGGTCATTA+TGG - Chr8:42405872-42405891 MsG0880044458.01.T01:intron 50.0%
!! TCCAGCTTGCGCTTTTTGGT+GGG + Chr8:42404900-42404919 None:intergenic 50.0%
!! TCTTACGGTGGGTTTTCTGC+TGG - Chr8:42405743-42405762 MsG0880044458.01.T01:intron 50.0%
!! TTTTACGGGCTCTGATACGG+CGG + Chr8:42405543-42405562 None:intergenic 50.0%
!!! CGCCCCTCCACATTTTTTAC+GGG + Chr8:42405557-42405576 None:intergenic 50.0%
!!! GCGCCCCTCCACATTTTTTA+CGG + Chr8:42405558-42405577 None:intergenic 50.0%
AAGCGCAAGCTGGACGAGAA+CGG - Chr8:42404906-42404925 MsG0880044458.01.T01:three_prime_UTR 55.0%
AAGCTCTTTATCCGCGGCCT+CGG - Chr8:42405098-42405117 MsG0880044458.01.T01:three_prime_UTR 55.0%
AAGCTGGACGAGAACGGCTT+CGG - Chr8:42404912-42404931 MsG0880044458.01.T01:three_prime_UTR 55.0%
AAGGCCACCGGGAAGTCAAA+GGG - Chr8:42405200-42405219 MsG0880044458.01.T01:intron 55.0%
ACGCAGCTGACGTTGCTCAA+CGG - Chr8:42405351-42405370 MsG0880044458.01.T01:intron 55.0%
AGCAGAACCATGTCCACCAC+CGG + Chr8:42405993-42406012 None:intergenic 55.0%
AGCTTGTCCCCTGGAAGATC+TGG + Chr8:42405401-42405420 None:intergenic 55.0%
CAGGTTCGTGGGAATGCTCA+TGG - Chr8:42405650-42405669 MsG0880044458.01.T01:intron 55.0%
CATCAGGGTCAGCCTCCAAT+GGG - Chr8:42405767-42405786 MsG0880044458.01.T01:intron 55.0%
CCAGAGTGAAGAGAGCTGAC+AGG - Chr8:42404803-42404822 MsG0880044458.01.T01:three_prime_UTR 55.0%
CCAGCTCCACCCATTGAAGA+CGG + Chr8:42405851-42405870 None:intergenic 55.0%
CCTGTCAGCTCTCTTCACTC+TGG + Chr8:42404806-42404825 None:intergenic 55.0%
CGAAGAAGCCATCGTCATCG+TGG - Chr8:42405175-42405194 MsG0880044458.01.T01:intron 55.0%
CGACGCAAGCTCTTTATCCG+CGG - Chr8:42405092-42405111 MsG0880044458.01.T01:three_prime_UTR 55.0%
CGCCCATCAATACGCTTGCT+AGG + Chr8:42405281-42405300 None:intergenic 55.0%
CGCGGATAAAGAGCTTGCGT+CGG + Chr8:42405094-42405113 None:intergenic 55.0%
CTAAAGCTCTCCCCTTCGGA+AGG - Chr8:42404951-42404970 MsG0880044458.01.T01:three_prime_UTR 55.0%
CTTCAATGGGTGGAGCTGGT+GGG - Chr8:42405852-42405871 MsG0880044458.01.T01:intron 55.0%
CTTCCGAAGGGGAGAGCTTT+AGG + Chr8:42404953-42404972 None:intergenic 55.0%
GCGGATAAAGAGCTTGCGTC+GGG + Chr8:42405093-42405112 None:intergenic 55.0%
GTAACCTTCCTCCACGTGGA+CGG - Chr8:42405233-42405252 MsG0880044458.01.T01:intron 55.0%
GTCATCGTGGATAAGGCCAC+CGG - Chr8:42405188-42405207 MsG0880044458.01.T01:intron 55.0%
GTGGGAAACAGCAAGGGATG+CGG - Chr8:42405609-42405628 MsG0880044458.01.T01:intron 55.0%
GTGGGTATGGGTTCTTACGG+TGG - Chr8:42405731-42405750 MsG0880044458.01.T01:intron 55.0%
TAAGGCCACCGGGAAGTCAA+AGG - Chr8:42405199-42405218 MsG0880044458.01.T01:intron 55.0%
TCAGGTGGAATGCAAGCTGG+TGG - Chr8:42406061-42406080 MsG0880044458.01.T01:intron 55.0%
TCATCGTGGATAAGGCCACC+GGG - Chr8:42405189-42405208 MsG0880044458.01.T01:intron 55.0%
TCTTCAATGGGTGGAGCTGG+TGG - Chr8:42405851-42405870 MsG0880044458.01.T01:intron 55.0%
TGGGAAACAGCAAGGGATGC+GGG - Chr8:42405610-42405629 MsG0880044458.01.T01:intron 55.0%
TTGTCCCCTGGAAGATCTGG+CGG + Chr8:42405398-42405417 None:intergenic 55.0%
! ATGGAACCAGGTTGAGCCCT+TGG + Chr8:42406163-42406182 None:intergenic 55.0%
! CATGGTTCTGCTGGAGGTAG+TGG - Chr8:42406001-42406020 MsG0880044458.01.T01:intron 55.0%
! CTCGTCCAGCTTGCGCTTTT+TGG + Chr8:42404904-42404923 None:intergenic 55.0%
! GCCGTAACCCTTTGACTTCC+CGG + Chr8:42405210-42405229 None:intergenic 55.0%
! GGCCTTATCCACGATGACGA+TGG + Chr8:42405186-42405205 None:intergenic 55.0%
! GGCGGTGGTTTGTCTTCTGT+TGG - Chr8:42405815-42405834 MsG0880044458.01.T01:intron 55.0%
! GGCTTCTTCGAGTTCACCGT+AGG + Chr8:42405165-42405184 None:intergenic 55.0%
! GGGTTTTCTGCTGGGCATCA+GGG - Chr8:42405752-42405771 MsG0880044458.01.T01:intron 55.0%
! GTAACCCTTTGACTTCCCGG+TGG + Chr8:42405207-42405226 None:intergenic 55.0%
! TCCCACCAAAAAGCGCAAGC+TGG - Chr8:42404896-42404915 MsG0880044458.01.T01:three_prime_UTR 55.0%
! TGGGTTTTCTGCTGGGCATC+AGG - Chr8:42405751-42405770 MsG0880044458.01.T01:intron 55.0%
!! AGTGGTGGTGGTGGTGGTTA+TGG - Chr8:42405932-42405951 MsG0880044458.01.T01:intron 55.0%
!! GTCCAGCTTGCGCTTTTTGG+TGG + Chr8:42404901-42404920 None:intergenic 55.0%
AAACAGCAAGGGATGCGGGG+TGG - Chr8:42405614-42405633 MsG0880044458.01.T01:intron 60.0%
AACGTGCCGCCAGATCTTCC+AGG - Chr8:42405389-42405408 MsG0880044458.01.T01:intron 60.0%
ACGTGCCGCCAGATCTTCCA+GGG - Chr8:42405390-42405409 MsG0880044458.01.T01:intron 60.0%
AGCTTGCGTCGGGAGATGTC+TGG + Chr8:42405083-42405102 None:intergenic 60.0%
ATCAGCTTGCGGCCTTCCGA+AGG + Chr8:42404966-42404985 None:intergenic 60.0%
CAGGCTCCGTCTTCAATGGG+TGG - Chr8:42405842-42405861 MsG0880044458.01.T01:intron 60.0%
CCGTCTTCAATGGGTGGAGC+TGG - Chr8:42405848-42405867 MsG0880044458.01.T01:intron 60.0%
CTGGCTGCAGCAGGGAATTC+AGG - Chr8:42405317-42405336 MsG0880044458.01.T01:intron 60.0%
CTTTATCCGCGGCCTCGGTT+GGG - Chr8:42405103-42405122 MsG0880044458.01.T01:three_prime_UTR 60.0%
GCACCATATTGACCCGACGC+AGG + Chr8:42405707-42405726 None:intergenic 60.0%
GCATCAGGGTCAGCCTCCAA+TGG - Chr8:42405766-42405785 MsG0880044458.01.T01:intron 60.0%
GCTTGCGTCGGGAGATGTCT+GGG + Chr8:42405082-42405101 None:intergenic 60.0%
GGGAAACAGCAAGGGATGCG+GGG - Chr8:42405611-42405630 MsG0880044458.01.T01:intron 60.0%
TCAGCTTGCGGCCTTCCGAA+GGG + Chr8:42404965-42404984 None:intergenic 60.0%
TCTTTATCCGCGGCCTCGGT+TGG - Chr8:42405102-42405121 MsG0880044458.01.T01:three_prime_UTR 60.0%
TGGAAGATCTGGCGGCACGT+TGG + Chr8:42405390-42405409 None:intergenic 60.0%
TGGGTCTGCAACTGCACGAG+CGG + Chr8:42405063-42405082 None:intergenic 60.0%
! ACTGGCTATGGCGGTAGTGG+TGG - Chr8:42405917-42405936 MsG0880044458.01.T01:intron 60.0%
! ATGGGTGGAGCTGGTGGGTA+TGG - Chr8:42405857-42405876 MsG0880044458.01.T01:intron 60.0%
! CCAGGTTGAGCCCTTGGTAC+CGG + Chr8:42406157-42406176 None:intergenic 60.0%
! GCTGGTGGATATCCCGACAG+TGG - Chr8:42406076-42406095 MsG0880044458.01.T01:intron 60.0%
! GGTGGACATGGTTCTGCTGG+AGG - Chr8:42405995-42406014 MsG0880044458.01.T01:intron 60.0%
! GGTGGTTATGGCGGAGGTAG+TGG - Chr8:42405944-42405963 MsG0880044458.01.T01:intron 60.0%
! GGTTCTGCTGGAGGTAGTGG+TGG - Chr8:42406004-42406023 MsG0880044458.01.T01:intron 60.0%
! TGGCGGAGGTAGTGGTGTGA+CGG - Chr8:42405952-42405971 MsG0880044458.01.T01:intron 60.0%
! TGGGCTAGAAGCTTGTCCCC+TGG + Chr8:42405410-42405429 None:intergenic 60.0%
!! CTAATAGGGCACCGTCCACG+TGG + Chr8:42405247-42405266 None:intergenic 60.0%
!! GCTGGAGGTAGTGGTGGACT+TGG - Chr8:42406010-42406029 MsG0880044458.01.T01:intron 60.0%
!! GGTGGTGGACATGGTTCTGC+TGG - Chr8:42405992-42406011 MsG0880044458.01.T01:intron 60.0%
!! GGTGGTGGTGGTGGTTATGG+CGG - Chr8:42405935-42405954 MsG0880044458.01.T01:intron 60.0%
!! TATGGCGGTAGTGGTGGTGG+TGG - Chr8:42405923-42405942 MsG0880044458.01.T01:intron 60.0%
!! TGGAGGTTATGGTGGGCCAG+CGG - Chr8:42405892-42405911 MsG0880044458.01.T01:intron 60.0%
ACGAGCGGCGGAGAGAACGT+CGG + Chr8:42405048-42405067 None:intergenic 65.0%
ACGGGTCCCAATGCAGGAGC+CGG - Chr8:42405971-42405990 MsG0880044458.01.T01:intron 65.0%
CAGCTTGCGGCCTTCCGAAG+GGG + Chr8:42404964-42404983 None:intergenic 65.0%
CCGGTACCAAGGGCTCAACC+TGG - Chr8:42406154-42406173 MsG0880044458.01.T01:intron 65.0%
CGGAGAGAACGTCGGGATGG+CGG + Chr8:42405040-42405059 None:intergenic 65.0%
CGTGCCGCCAGATCTTCCAG+GGG - Chr8:42405391-42405410 MsG0880044458.01.T01:intron 65.0%
CTGGACGAGAACGGCTTCGG+CGG - Chr8:42404915-42404934 MsG0880044458.01.T01:three_prime_UTR 65.0%
GAGTGAACGGAGGCCTTCGG+TGG + Chr8:42405135-42405154 None:intergenic 65.0%
GCGCGTTACTGTCACGCAGC+TGG - Chr8:42405298-42405317 MsG0880044458.01.T01:intron 65.0%
GGGCCTGCGTCGGGTCAATA+TGG - Chr8:42405701-42405720 MsG0880044458.01.T01:intron 65.0%
GGTTGGGACACCACCACCGA+AGG - Chr8:42405119-42405138 MsG0880044458.01.T01:intron 65.0%
GTCTGCAACTGCACGAGCGG+CGG + Chr8:42405060-42405079 None:intergenic 65.0%
TCACGCAGCTGGCTGCAGCA+GGG - Chr8:42405309-42405328 MsG0880044458.01.T01:intron 65.0%
TGAACGGAGGCCTTCGGTGG+TGG + Chr8:42405132-42405151 None:intergenic 65.0%
TGGGGATGGCTCCTGCAGCT+GGG - Chr8:42405681-42405700 MsG0880044458.01.T01:intron 65.0%
TTGGGGATGGCTCCTGCAGC+TGG - Chr8:42405680-42405699 MsG0880044458.01.T01:intron 65.0%
! GCGACTGGCTATGGCGGTAG+TGG - Chr8:42405914-42405933 MsG0880044458.01.T01:intron 65.0%
! GGAGCTGGTGGGTATGGTGG+TGG - Chr8:42405863-42405882 MsG0880044458.01.T01:intron 65.0%
! GGCGGAGGTAGTGGTGTGAC+GGG - Chr8:42405953-42405972 MsG0880044458.01.T01:intron 65.0%
! GGCTATGGCGGTAGTGGTGG+TGG - Chr8:42405920-42405939 MsG0880044458.01.T01:intron 65.0%
! GGTGGAGCTGGTGGGTATGG+TGG - Chr8:42405860-42405879 MsG0880044458.01.T01:intron 65.0%
!! AACGTCGGGATGGCGGACGA+CGG + Chr8:42405033-42405052 None:intergenic 65.0%
!! ATAGGGCACCGTCCACGTGG+AGG + Chr8:42405244-42405263 None:intergenic 65.0%
!! CCACCACCGGCTCCTGCATT+GGG + Chr8:42405980-42405999 None:intergenic 65.0%
!! GGTGGTGGTGGTTATGGCGG+AGG - Chr8:42405938-42405957 MsG0880044458.01.T01:intron 65.0%
!! GGTGTGACGGGTCCCAATGC+AGG - Chr8:42405965-42405984 MsG0880044458.01.T01:intron 65.0%
!! TCCACCACCGGCTCCTGCAT+TGG + Chr8:42405981-42406000 None:intergenic 65.0%
!! TGGAGCGTCGCCGGTACCAA+GGG - Chr8:42406144-42406163 MsG0880044458.01.T01:intron 65.0%
CACGAACCTGAGCCCCGTCC+GGG + Chr8:42405640-42405659 None:intergenic 70.0%
CCACGAACCTGAGCCCCGTC+CGG + Chr8:42405641-42405660 None:intergenic 70.0%
CCCAATGCAGGAGCCGGTGG+TGG - Chr8:42405977-42405996 MsG0880044458.01.T01:intron 70.0%
CGAGCGGCGGAGAGAACGTC+GGG + Chr8:42405047-42405066 None:intergenic 70.0%
CGGACGGGGCTCAGGTTCGT+GGG - Chr8:42405639-42405658 MsG0880044458.01.T01:intron 70.0%
CGGCGGAGAGAACGTCGGGA+TGG + Chr8:42405043-42405062 None:intergenic 70.0%
GGCACCGTCCACGTGGAGGA+AGG + Chr8:42405240-42405259 None:intergenic 70.0%
GGTCCCAATGCAGGAGCCGG+TGG - Chr8:42405974-42405993 MsG0880044458.01.T01:intron 70.0%
GTCACGCAGCTGGCTGCAGC+AGG - Chr8:42405308-42405327 MsG0880044458.01.T01:intron 70.0%
TCCTGCAGCTGGGCCTGCGT+CGG - Chr8:42405691-42405710 MsG0880044458.01.T01:intron 70.0%
TGGTGTCCCAACCGAGGCCG+CGG + Chr8:42405112-42405131 None:intergenic 70.0%
! CCAGCGGCGACTGGCTATGG+CGG - Chr8:42405908-42405927 MsG0880044458.01.T01:intron 70.0%
! CGGTGGTGGTGTCCCAACCG+AGG + Chr8:42405118-42405137 None:intergenic 70.0%
!! CTGGAGCGTCGCCGGTACCA+AGG - Chr8:42406143-42406162 MsG0880044458.01.T01:intron 70.0%
!! GATGGCGGACGACGGCGTCT+TGG + Chr8:42405025-42405044 None:intergenic 70.0%
!! GCAGGAGCCGGTGGTGGACA+TGG - Chr8:42405983-42406002 MsG0880044458.01.T01:intron 70.0%
!! GGCGGTAGTGGTGGTGGTGG+TGG - Chr8:42405926-42405945 MsG0880044458.01.T01:intron 70.0%
!! TATGGTGGGCCAGCGGCGAC+TGG - Chr8:42405899-42405918 MsG0880044458.01.T01:intron 70.0%
!! TCCTCCTGCTGGAGCGTCGC+CGG - Chr8:42406135-42406154 MsG0880044458.01.T01:intron 70.0%
ACCGGCGACGCTCCAGCAGG+AGG + Chr8:42406139-42406158 None:intergenic 75.0%
ACGGCGGCGTTTGCCCCCTC+AGG + Chr8:42405527-42405546 None:intergenic 75.0%
CCGCCATAGCCAGTCGCCGC+TGG + Chr8:42405911-42405930 None:intergenic 75.0%
CCGGACGGGGCTCAGGTTCG+TGG - Chr8:42405638-42405657 MsG0880044458.01.T01:intron 75.0%
CCTGCAGCTGGGCCTGCGTC+GGG - Chr8:42405692-42405711 MsG0880044458.01.T01:intron 75.0%
GCAAGGGATGCGGGGTGGCC+CGG - Chr8:42405619-42405638 MsG0880044458.01.T01:intron 75.0%
GGCGGACGACGGCGTCTTGG+AGG + Chr8:42405022-42405041 None:intergenic 75.0%
! GGGCCAGCGGCGACTGGCTA+TGG - Chr8:42405905-42405924 MsG0880044458.01.T01:intron 75.0%
!! GGTACCGGCGACGCTCCAGC+AGG + Chr8:42406142-42406161 None:intergenic 75.0%
! CCCGACGCAGGCCCAGCTGC+AGG + Chr8:42405695-42405714 None:intergenic 80.0%
! GATGCGGGGTGGCCCGGACG+GGG - Chr8:42405625-42405644 MsG0880044458.01.T01:intron 80.0%
! GGATGCGGGGTGGCCCGGAC+GGG - Chr8:42405624-42405643 MsG0880044458.01.T01:intron 80.0%
! GGGATGCGGGGTGGCCCGGA+CGG - Chr8:42405623-42405642 MsG0880044458.01.T01:intron 80.0%
! GGGTGGCCCGGACGGGGCTC+AGG - Chr8:42405631-42405650 MsG0880044458.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr8 gene 42404775 42408103 42404775 ID=MsG0880044458.01;Name=MsG0880044458.01
Chr8 mRNA 42404775 42408103 42404775 ID=MsG0880044458.01.T01;Parent=MsG0880044458.01;Name=MsG0880044458.01.T01;_AED=0.45;_eAED=0.45;_QI=104|0|0.5|1|0|0.5|2|351|443
Chr8 exon 42404775 42405125 42404775 ID=MsG0880044458.01.T01:exon:8027;Parent=MsG0880044458.01.T01
Chr8 exon 42406668 42408103 42406668 ID=MsG0880044458.01.T01:exon:8026;Parent=MsG0880044458.01.T01
Chr8 five_prime_UTR 42408000 42408103 42408000 ID=MsG0880044458.01.T01:five_prime_utr;Parent=MsG0880044458.01.T01
Chr8 CDS 42406668 42407999 42406668 ID=MsG0880044458.01.T01:cds;Parent=MsG0880044458.01.T01
Chr8 three_prime_UTR 42404775 42405125 42404775 ID=MsG0880044458.01.T01:three_prime_utr;Parent=MsG0880044458.01.T01
Gene Sequence

>MsG0880044458.01.T01

ATGCAAACGATAATGGATCCCACCAAAAAGCGCAAGCTGGACGAGAACGGCTTCGGCGGCGAATCTGATCACCTAAAGCTCTCCCCTTCGGAAGGCCGCAAGCTGATCGAGCGTTTCACCTCCGACCAGCTAATCAACATCCTCCAAGACGCCGTCGTCCGCCATCCCGACGTTCTCTCCGCCGCTCGTGCAGTTGCAGACCCAGACATCTCCCGACGCAAGCTCTTTATCCGCGGCCTCGGTTGGGACACCACCACCGAAGGCCTCCGTTCACTCTTTTCAACCTACGGTGAACTCGAAGAAGCCATCGTCATCGTGGATAAGGCCACCGGGAAGTCAAAGGGTTACGGCTTTGTAACCTTCCTCCACGTGGACGGTGCCCTATTAGCTCTCCGTGAGCCTAGCAAGCGTATTGATGGGCGCGTTACTGTCACGCAGCTGGCTGCAGCAGGGAATTCAGGCTCCAACACTAACGCAGCTGACGTTGCTCAACGGAAAATATATGTATCCAACGTGCCGCCAGATCTTCCAGGGGACAAGCTTCTAGCCCACTTCTCAATTTATGGGGAGATTGAGGAAGGTCCATTAGGCTTTGATAAGCAGACAGGAAGATCCAAAGGGTTCGCTCTTTTTGTTTATAAGACACCTGAGGGGGCAAACGCCGCCGTATCAGAGCCCGTAAAAAATGTGGAGGGGCGCCAGTTAAATTGCAAGCTGGCAATAACAGATGGTGGGAAACAGCAAGGGATGCGGGGTGGCCCGGACGGGGCTCAGGTTCGTGGGAATGCTCATGGAAATGGATTGGGGATGGCTCCTGCAGCTGGGCCTGCGTCGGGTCAATATGGTGCTTCTGTGGGTATGGGTTCTTACGGTGGGTTTTCTGCTGGGCATCAGGGTCAGCCTCCAATGGGTAACCATCCTTTGAATTCGTCTGTTGGCGGTGGTTTGTCTTCTGTTGGGAATCAGGCTCCGTCTTCAATGGGTGGAGCTGGTGGGTATGGTGGTGGTCATTATGGAGGTTATGGTGGGCCAGCGGCGACTGGCTATGGCGGTAGTGGTGGTGGTGGTGGTTATGGCGGAGGTAGTGGTGTGACGGGTCCCAATGCAGGAGCCGGTGGTGGACATGGTTCTGCTGGAGGTAGTGGTGGACTTGGACTTACTTCCTTGTACAGATTACCAAGTTCAGGTGGAATGCAAGCTGGTGGATATCCCGACAGTGGACACTATAATTCATCGGGCTATCCGAATCAGCATCATCCTCCTGCTGGAGCGTCGCCGGTACCAAGGGCTCAACCTGGTTCCATGTATTCAAATGTGCCTCCTTACTACTAA
Protein sequence

>MsG0880044458.01.T01

MQTIMDPTKKRKLDENGFGGESDHLKLSPSEGRKLIERFTSDQLINILQDAVVRHPDVLSAARAVADPDISRRKLFIRGLGWDTTTEGLRSLFSTYGELEEAIVIVDKATGKSKGYGFVTFLHVDGALLALREPSKRIDGRVTVTQLAAAGNSGSNTNAADVAQRKIYVSNVPPDLPGDKLLAHFSIYGEIEEGPLGFDKQTGRSKGFALFVYKTPEGANAAVSEPVKNVEGRQLNCKLAITDGGKQQGMRGGPDGAQVRGNAHGNGLGMAPAAGPASGQYGASVGMGSYGGFSAGHQGQPPMGNHPLNSSVGGGLSSVGNQAPSSMGGAGGYGGGHYGGYGGPAATGYGGSGGGGGYGGGSGVTGPNAGAGGGHGSAGGSGGLGLTSLYRLPSSGGMQAGGYPDSGHYNSSGYPNQHHPPAGASPVPRAQPGSMYSNVPPYY*