Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045191.01.T01 | XP_003628834.2 | 97.65 | 383 | 9 | 0 | 1 | 383 | 1 | 383 | 0 | 775 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045191.01.T01 | Q9T075 | 54.476 | 391 | 167 | 8 | 1 | 383 | 1 | 388 | 2.19E-151 | 435 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045191.01.T01 | G7LHS6 | 97.650 | 383 | 9 | 0 | 1 | 383 | 1 | 383 | 0.0 | 775 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0880045191.01 | MsG0280006526.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045191.01.T01 | MTR_8g067470 | 97.650 | 383 | 9 | 0 | 1 | 383 | 1 | 383 | 0.0 | 775 |
MsG0880045191.01.T01 | MTR_2g010210 | 54.545 | 385 | 169 | 4 | 3 | 383 | 5 | 387 | 3.18e-153 | 437 |
MsG0880045191.01.T01 | MTR_5g045140 | 65.891 | 129 | 31 | 1 | 255 | 383 | 58 | 173 | 1.71e-50 | 167 |
MsG0880045191.01.T01 | MTR_1g116055 | 26.667 | 285 | 189 | 7 | 90 | 367 | 127 | 398 | 5.38e-25 | 105 |
MsG0880045191.01.T01 | MTR_1g116055 | 26.633 | 199 | 138 | 4 | 90 | 288 | 127 | 317 | 8.35e-17 | 80.9 |
MsG0880045191.01.T01 | MTR_5g045135 | 62.295 | 61 | 16 | 1 | 1 | 61 | 14 | 67 | 4.09e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045191.01.T01 | AT4G37880 | 54.476 | 391 | 167 | 8 | 1 | 383 | 1 | 388 | 2.23e-152 | 435 |
MsG0880045191.01.T01 | AT2G22690 | 51.928 | 389 | 173 | 5 | 1 | 383 | 1 | 381 | 6.31e-144 | 414 |
MsG0880045191.01.T01 | AT2G22690 | 51.928 | 389 | 173 | 5 | 1 | 383 | 1 | 381 | 6.31e-144 | 414 |
MsG0880045191.01.T01 | AT5G09630 | 45.573 | 384 | 199 | 7 | 5 | 383 | 8 | 386 | 1.54e-115 | 342 |
MsG0880045191.01.T01 | AT3G55070 | 27.372 | 274 | 177 | 6 | 106 | 367 | 138 | 401 | 2.96e-27 | 112 |
MsG0880045191.01.T01 | AT3G55070 | 26.702 | 191 | 128 | 3 | 106 | 290 | 138 | 322 | 2.91e-19 | 88.2 |
Find 78 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGCTTTCCCCGTCTAAC+TGG | 0.233374 | 8:+55592610 | MsG0880045191.01.T01:CDS |
TGAGGGCTGGCTCCAGGTTC+TGG | 0.250576 | 8:-55592356 | None:intergenic |
AAGGCAGTTCTGCAATCTTT+TGG | 0.252217 | 8:+55592656 | MsG0880045191.01.T01:CDS |
ACCTGGAGCCAGCCCTCAAC+TGG | 0.256912 | 8:+55592361 | MsG0880045191.01.T01:CDS |
TTCATACTTGCAGCAGATTC+AGG | 0.269424 | 8:-55592288 | None:intergenic |
CACCGACTGCACTAAGAAAA+TGG | 0.310818 | 8:-55592263 | None:intergenic |
GACGGTAGCAGCAGGGATTC+AGG | 0.318721 | 8:+55592707 | MsG0880045191.01.T01:CDS |
TCTCAATTGGCACCGGTAAC+TGG | 0.319968 | 8:-55592788 | None:intergenic |
AACTGGCCTTCAGCTCATTC+AGG | 0.340221 | 8:-55592041 | None:intergenic |
TGCTGTAGTCCAGAAGCTTA+TGG | 0.343958 | 8:+55592542 | MsG0880045191.01.T01:CDS |
TAATTTCCATTTGACCAATT+GGG | 0.345730 | 8:-55592077 | None:intergenic |
GAAGACAAGCCATAAGCTTC+TGG | 0.348017 | 8:-55592551 | None:intergenic |
AATGTAGCACTCAGCAAGTA+TGG | 0.348189 | 8:+55592114 | MsG0880045191.01.T01:CDS |
GCAAAAGTTATCCAGTTCTA+AGG | 0.348546 | 8:+55591918 | MsG0880045191.01.T01:CDS |
ATAATTTCCATTTGACCAAT+TGG | 0.351026 | 8:-55592078 | None:intergenic |
CCCAGTTGAGGGCTGGCTCC+AGG | 0.354983 | 8:-55592362 | None:intergenic |
TTTGTGAAATTACTTCAAAA+TGG | 0.357929 | 8:+55592453 | MsG0880045191.01.T01:CDS |
TTACTTAAAATTTCCCCAAT+TGG | 0.380220 | 8:+55592063 | MsG0880045191.01.T01:CDS |
AATTTCCCCAATTGGTCAAA+TGG | 0.388662 | 8:+55592071 | MsG0880045191.01.T01:CDS |
GGTTGGCCGAGGAACTTAAA+AGG | 0.401326 | 8:+55592637 | MsG0880045191.01.T01:CDS |
GGTTCTGGTTCTGCATGGCT+TGG | 0.407389 | 8:-55592341 | None:intergenic |
GCAGTCTATGAGCCAGTTAC+CGG | 0.415292 | 8:+55592776 | MsG0880045191.01.T01:CDS |
AATGGTCTCCTACATCAAAA+AGG | 0.416600 | 8:-55592245 | None:intergenic |
ATGGCTTGTCTTCTGTGGCC+TGG | 0.444819 | 8:+55592561 | MsG0880045191.01.T01:CDS |
AAGTATGAAATCTCCATTCT+CGG | 0.449395 | 8:+55592302 | MsG0880045191.01.T01:CDS |
AACTCGCTGTCCATCTCAAT+TGG | 0.449952 | 8:-55592801 | None:intergenic |
GTTGCTTGTTCCTTTGAGAC+AGG | 0.451011 | 8:-55592849 | None:intergenic |
TCAATATCAAAGGGACAATA+CGG | 0.459508 | 8:-55592969 | None:intergenic |
TTTCCCCGTCTAACTGGGAT+AGG | 0.470408 | 8:+55592616 | MsG0880045191.01.T01:CDS |
TTGAGTGTGACGGTAGCAGC+AGG | 0.473794 | 8:+55592699 | MsG0880045191.01.T01:CDS |
CTCCAGGTTCTGGTTCTGCA+TGG | 0.481058 | 8:-55592346 | None:intergenic |
ATCATAAATTTGAGGAGAGC+TGG | 0.481983 | 8:-55592735 | None:intergenic |
GTTATCCAGTTCTAAGGCTC+AGG | 0.482564 | 8:+55591924 | MsG0880045191.01.T01:CDS |
CATCTCCTGAGCCTTAGAAC+TGG | 0.486226 | 8:-55591929 | None:intergenic |
ATTTATGATTGTCATGAAGC+AGG | 0.487554 | 8:+55592749 | MsG0880045191.01.T01:CDS |
CCAACCTATCCCAGTTAGAC+GGG | 0.489599 | 8:-55592620 | None:intergenic |
GGTAGGTTCTTGCATAATGA+AGG | 0.493869 | 8:-55592494 | None:intergenic |
CCCGTCTAACTGGGATAGGT+TGG | 0.495492 | 8:+55592620 | MsG0880045191.01.T01:CDS |
AGCCATGCAGAACCAGAACC+TGG | 0.507650 | 8:+55592344 | MsG0880045191.01.T01:CDS |
GTCGCAGCCCAGTTGAGGGC+TGG | 0.509757 | 8:-55592369 | None:intergenic |
AGCTTATGGCTTGTCTTCTG+TGG | 0.513594 | 8:+55592556 | MsG0880045191.01.T01:CDS |
ATTTGATACATCTCCGAGAA+TGG | 0.522155 | 8:-55592315 | None:intergenic |
AATTTCCATTTGACCAATTG+GGG | 0.524036 | 8:-55592076 | None:intergenic |
ATTAGTCGCAGCCCAGTTGA+GGG | 0.524595 | 8:-55592373 | None:intergenic |
CTGTGCTGCATCAATATCAA+AGG | 0.524633 | 8:-55592979 | None:intergenic |
AATTAGTCGCAGCCCAGTTG+AGG | 0.529952 | 8:-55592374 | None:intergenic |
GGGGAAAGCAATGCATGGTA+TGG | 0.533062 | 8:-55592600 | None:intergenic |
TCATGACAATCATAAATTTG+AGG | 0.538089 | 8:-55592743 | None:intergenic |
GACTGGTAGCGAAAGGAGAA+AGG | 0.540394 | 8:-55592515 | None:intergenic |
ATTGCTTTCCCCGTCTAACT+GGG | 0.544120 | 8:+55592611 | MsG0880045191.01.T01:CDS |
CCTGGAGCCAGCCCTCAACT+GGG | 0.550200 | 8:+55592362 | MsG0880045191.01.T01:CDS |
GCCAACCTATCCCAGTTAGA+CGG | 0.550832 | 8:-55592621 | None:intergenic |
TGATTGTCATGAAGCAGGAA+TGG | 0.551653 | 8:+55592754 | MsG0880045191.01.T01:CDS |
GTGAAATTACTTCAAAATGG+TGG | 0.560068 | 8:+55592456 | MsG0880045191.01.T01:CDS |
CTGTCCATCTCAATTGGCAC+CGG | 0.563446 | 8:-55592795 | None:intergenic |
CCACAAGACATCAACATTGG+AGG | 0.567388 | 8:-55592882 | None:intergenic |
CACAAGACATCAACATTGGA+GGG | 0.567508 | 8:-55592881 | None:intergenic |
AACTGTCCTGAATGAGCTGA+AGG | 0.568536 | 8:+55592035 | MsG0880045191.01.T01:CDS |
TCAAATGGAAATTATACAGA+AGG | 0.576332 | 8:+55592086 | MsG0880045191.01.T01:CDS |
ATGTAGCACTCAGCAAGTAT+GGG | 0.577213 | 8:+55592115 | MsG0880045191.01.T01:CDS |
CTCAAAGGAACAAGCAACTG+AGG | 0.581368 | 8:+55592854 | MsG0880045191.01.T01:CDS |
GTAGGTTCTTGCATAATGAA+GGG | 0.589360 | 8:-55592493 | None:intergenic |
TGTGCTGCATCAATATCAAA+GGG | 0.592929 | 8:-55592978 | None:intergenic |
CAATATCAAAGGGACAATAC+GGG | 0.593619 | 8:-55592968 | None:intergenic |
GTTACCGGTGCCAATTGAGA+TGG | 0.593849 | 8:+55592791 | MsG0880045191.01.T01:CDS |
TGGCCACAAGACATCAACAT+TGG | 0.602323 | 8:-55592885 | None:intergenic |
CTGGACTACAGCAATATGAC+TGG | 0.604378 | 8:-55592532 | None:intergenic |
CCTCCAATGTTGATGTCTTG+TGG | 0.611713 | 8:+55592882 | MsG0880045191.01.T01:CDS |
GCTGCTACCGTCACACTCAA+CGG | 0.613137 | 8:-55592696 | None:intergenic |
GGTAGCGAAAGGAGAAAGGT+AGG | 0.616677 | 8:-55592511 | None:intergenic |
TAACTGGGATAGGTTGGCCG+AGG | 0.623359 | 8:+55592626 | MsG0880045191.01.T01:CDS |
GCAATATGACTGGTAGCGAA+AGG | 0.624873 | 8:-55592522 | None:intergenic |
TAGACTGCTTACAGAGGACA+TGG | 0.634223 | 8:-55592905 | None:intergenic |
CAACAGTCCGTTGAGTGTGA+CGG | 0.636725 | 8:+55592689 | MsG0880045191.01.T01:CDS |
TCAAGATAGACTGCTTACAG+AGG | 0.656273 | 8:-55592911 | None:intergenic |
TGAGTGTGACGGTAGCAGCA+GGG | 0.668113 | 8:+55592700 | MsG0880045191.01.T01:CDS |
TAGACGGGGAAAGCAATGCA+TGG | 0.674813 | 8:-55592605 | None:intergenic |
CAACCTATCCCAGTTAGACG+GGG | 0.683092 | 8:-55592619 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGTGAAATTACTTCAAAA+TGG | + | Chr8:55592453-55592472 | MsG0880045191.01.T01:CDS | 20.0% |
! | ATAATTTCCATTTGACCAAT+TGG | - | Chr8:55592081-55592100 | None:intergenic | 25.0% |
! | TAATTTCCATTTGACCAATT+GGG | - | Chr8:55592080-55592099 | None:intergenic | 25.0% |
! | TCAAATGGAAATTATACAGA+AGG | + | Chr8:55592086-55592105 | MsG0880045191.01.T01:CDS | 25.0% |
! | TCATGACAATCATAAATTTG+AGG | - | Chr8:55592746-55592765 | None:intergenic | 25.0% |
! | TTACTTAAAATTTCCCCAAT+TGG | + | Chr8:55592063-55592082 | MsG0880045191.01.T01:CDS | 25.0% |
!! | TGTAAGCTTTTGATATATCA+GGG | - | Chr8:55592161-55592180 | None:intergenic | 25.0% |
!!! | AAATACTTTTGTGCTATTCT+TGG | - | Chr8:55592943-55592962 | None:intergenic | 25.0% |
AAACAAAAACAGAATGGAAC+TGG | - | Chr8:55592827-55592846 | None:intergenic | 30.0% | |
AAGTATGAAATCTCCATTCT+CGG | + | Chr8:55592302-55592321 | MsG0880045191.01.T01:CDS | 30.0% | |
AATTTCCATTTGACCAATTG+GGG | - | Chr8:55592079-55592098 | None:intergenic | 30.0% | |
ATTTATGATTGTCATGAAGC+AGG | + | Chr8:55592749-55592768 | MsG0880045191.01.T01:CDS | 30.0% | |
GTGAAATTACTTCAAAATGG+TGG | + | Chr8:55592456-55592475 | MsG0880045191.01.T01:CDS | 30.0% | |
TCAATATCAAAGGGACAATA+CGG | - | Chr8:55592972-55592991 | None:intergenic | 30.0% | |
! | ACTTTTGCTTCTTTGTAACT+CGG | - | Chr8:55591906-55591925 | None:intergenic | 30.0% |
! | CTGTAAGCTTTTGATATATC+AGG | - | Chr8:55592162-55592181 | None:intergenic | 30.0% |
!! | TGGGGAAATTTTAAGTAAAC+TGG | - | Chr8:55592061-55592080 | None:intergenic | 30.0% |
AATGGTCTCCTACATCAAAA+AGG | - | Chr8:55592248-55592267 | None:intergenic | 35.0% | |
AATTTCCCCAATTGGTCAAA+TGG | + | Chr8:55592071-55592090 | MsG0880045191.01.T01:CDS | 35.0% | |
ATCATAAATTTGAGGAGAGC+TGG | - | Chr8:55592738-55592757 | None:intergenic | 35.0% | |
ATTTGATACATCTCCGAGAA+TGG | - | Chr8:55592318-55592337 | None:intergenic | 35.0% | |
CAATATCAAAGGGACAATAC+GGG | - | Chr8:55592971-55592990 | None:intergenic | 35.0% | |
CAGGACAAACAAAAACAGAA+TGG | - | Chr8:55592833-55592852 | None:intergenic | 35.0% | |
GCAAAAGTTATCCAGTTCTA+AGG | + | Chr8:55591918-55591937 | MsG0880045191.01.T01:CDS | 35.0% | |
GTAGGTTCTTGCATAATGAA+GGG | - | Chr8:55592496-55592515 | None:intergenic | 35.0% | |
TGTGCTGCATCAATATCAAA+GGG | - | Chr8:55592981-55593000 | None:intergenic | 35.0% | |
!! | TTTTGTTTGTCCTGTCTCAA+AGG | + | Chr8:55592839-55592858 | MsG0880045191.01.T01:CDS | 35.0% |
!!! | CAGTTTTAGAATCAAGCACT+TGG | - | Chr8:55592020-55592039 | None:intergenic | 35.0% |
AATGTAGCACTCAGCAAGTA+TGG | + | Chr8:55592114-55592133 | MsG0880045191.01.T01:CDS | 40.0% | |
ATGTAGCACTCAGCAAGTAT+GGG | + | Chr8:55592115-55592134 | MsG0880045191.01.T01:CDS | 40.0% | |
CACAAGACATCAACATTGGA+GGG | - | Chr8:55592884-55592903 | None:intergenic | 40.0% | |
CTGTGCTGCATCAATATCAA+AGG | - | Chr8:55592982-55593001 | None:intergenic | 40.0% | |
GGTAGGTTCTTGCATAATGA+AGG | - | Chr8:55592497-55592516 | None:intergenic | 40.0% | |
TCAAGATAGACTGCTTACAG+AGG | - | Chr8:55592914-55592933 | None:intergenic | 40.0% | |
TCTGAAAAACTCGCTCAAAG+TGG | + | Chr8:55592396-55592415 | MsG0880045191.01.T01:CDS | 40.0% | |
TGATTGTCATGAAGCAGGAA+TGG | + | Chr8:55592754-55592773 | MsG0880045191.01.T01:CDS | 40.0% | |
TTCATACTTGCAGCAGATTC+AGG | - | Chr8:55592291-55592310 | None:intergenic | 40.0% | |
! | AAGGCAGTTCTGCAATCTTT+TGG | + | Chr8:55592656-55592675 | MsG0880045191.01.T01:CDS | 40.0% |
! | AGGCAGTTCTGCAATCTTTT+GGG | + | Chr8:55592657-55592676 | MsG0880045191.01.T01:CDS | 40.0% |
! | GACCATTTTCTTAGTGCAGT+CGG | + | Chr8:55592261-55592280 | MsG0880045191.01.T01:CDS | 40.0% |
! | GGAGACTTTTCAATCTTTCC+AGG | - | Chr8:55592582-55592601 | None:intergenic | 40.0% |
!!! | GAACTGCCTTTTAAGTTCCT+CGG | - | Chr8:55592646-55592665 | None:intergenic | 40.0% |
AACTCGCTGTCCATCTCAAT+TGG | - | Chr8:55592804-55592823 | None:intergenic | 45.0% | |
AACTGTCCTGAATGAGCTGA+AGG | + | Chr8:55592035-55592054 | MsG0880045191.01.T01:CDS | 45.0% | |
ATTGCTTTCCCCGTCTAACT+GGG | + | Chr8:55592611-55592630 | MsG0880045191.01.T01:CDS | 45.0% | |
CCACAAGACATCAACATTGG+AGG | - | Chr8:55592885-55592904 | None:intergenic | 45.0% | |
CCTCCAATGTTGATGTCTTG+TGG | + | Chr8:55592882-55592901 | MsG0880045191.01.T01:CDS | 45.0% | |
CTCAAAGGAACAAGCAACTG+AGG | + | Chr8:55592854-55592873 | MsG0880045191.01.T01:CDS | 45.0% | |
CTGGACTACAGCAATATGAC+TGG | - | Chr8:55592535-55592554 | None:intergenic | 45.0% | |
GAAGACAAGCCATAAGCTTC+TGG | - | Chr8:55592554-55592573 | None:intergenic | 45.0% | |
TAGACTGCTTACAGAGGACA+TGG | - | Chr8:55592908-55592927 | None:intergenic | 45.0% | |
TGCTGTAGTCCAGAAGCTTA+TGG | + | Chr8:55592542-55592561 | MsG0880045191.01.T01:CDS | 45.0% | |
TGGCCACAAGACATCAACAT+TGG | - | Chr8:55592888-55592907 | None:intergenic | 45.0% | |
! | AGCTTATGGCTTGTCTTCTG+TGG | + | Chr8:55592556-55592575 | MsG0880045191.01.T01:CDS | 45.0% |
! | CACCGACTGCACTAAGAAAA+TGG | - | Chr8:55592266-55592285 | None:intergenic | 45.0% |
! | GCAATATGACTGGTAGCGAA+AGG | - | Chr8:55592525-55592544 | None:intergenic | 45.0% |
!! | GTTATCCAGTTCTAAGGCTC+AGG | + | Chr8:55591924-55591943 | MsG0880045191.01.T01:CDS | 45.0% |
!! | GTTGCTTGTTCCTTTGAGAC+AGG | - | Chr8:55592852-55592871 | None:intergenic | 45.0% |
AAAGGCCCTGGCGGTAAAAA+TGG | - | Chr8:55592230-55592249 | None:intergenic | 50.0% | |
AATTAGTCGCAGCCCAGTTG+AGG | - | Chr8:55592377-55592396 | None:intergenic | 50.0% | |
ATTAGTCGCAGCCCAGTTGA+GGG | - | Chr8:55592376-55592395 | None:intergenic | 50.0% | |
CAACAGTCCGTTGAGTGTGA+CGG | + | Chr8:55592689-55592708 | MsG0880045191.01.T01:CDS | 50.0% | |
CAACCTATCCCAGTTAGACG+GGG | - | Chr8:55592622-55592641 | None:intergenic | 50.0% | |
CATCTCCTGAGCCTTAGAAC+TGG | - | Chr8:55591932-55591951 | None:intergenic | 50.0% | |
CATTGCTTTCCCCGTCTAAC+TGG | + | Chr8:55592610-55592629 | MsG0880045191.01.T01:CDS | 50.0% | |
CCAACCTATCCCAGTTAGAC+GGG | - | Chr8:55592623-55592642 | None:intergenic | 50.0% | |
CTACATCAAAAAGGCCCTGG+CGG | - | Chr8:55592239-55592258 | None:intergenic | 50.0% | |
CTCCTACATCAAAAAGGCCC+TGG | - | Chr8:55592242-55592261 | None:intergenic | 50.0% | |
CTGTCCATCTCAATTGGCAC+CGG | - | Chr8:55592798-55592817 | None:intergenic | 50.0% | |
GCAGTCTATGAGCCAGTTAC+CGG | + | Chr8:55592776-55592795 | MsG0880045191.01.T01:CDS | 50.0% | |
GCCAACCTATCCCAGTTAGA+CGG | - | Chr8:55592624-55592643 | None:intergenic | 50.0% | |
GGGGAAAGCAATGCATGGTA+TGG | - | Chr8:55592603-55592622 | None:intergenic | 50.0% | |
GGTAGCGAAAGGAGAAAGGT+AGG | - | Chr8:55592514-55592533 | None:intergenic | 50.0% | |
TAGACGGGGAAAGCAATGCA+TGG | - | Chr8:55592608-55592627 | None:intergenic | 50.0% | |
TTTCCCCGTCTAACTGGGAT+AGG | + | Chr8:55592616-55592635 | MsG0880045191.01.T01:CDS | 50.0% | |
! | GACTGGTAGCGAAAGGAGAA+AGG | - | Chr8:55592518-55592537 | None:intergenic | 50.0% |
! | GGTTGGCCGAGGAACTTAAA+AGG | + | Chr8:55592637-55592656 | MsG0880045191.01.T01:CDS | 50.0% |
! | GTTACCGGTGCCAATTGAGA+TGG | + | Chr8:55592791-55592810 | MsG0880045191.01.T01:CDS | 50.0% |
!! | AACTGGCCTTCAGCTCATTC+AGG | - | Chr8:55592044-55592063 | None:intergenic | 50.0% |
!! | GCCAACCATTTTTACCGCCA+GGG | + | Chr8:55592222-55592241 | MsG0880045191.01.T01:CDS | 50.0% |
!! | TCTCAATTGGCACCGGTAAC+TGG | - | Chr8:55592791-55592810 | None:intergenic | 50.0% |
!! | TGCCAACCATTTTTACCGCC+AGG | + | Chr8:55592221-55592240 | MsG0880045191.01.T01:CDS | 50.0% |
AGCCATGCAGAACCAGAACC+TGG | + | Chr8:55592344-55592363 | MsG0880045191.01.T01:CDS | 55.0% | |
CCCGTCTAACTGGGATAGGT+TGG | + | Chr8:55592620-55592639 | MsG0880045191.01.T01:CDS | 55.0% | |
GCCCTGGCGGTAAAAATGGT+TGG | - | Chr8:55592226-55592245 | None:intergenic | 55.0% | |
GCTGCTACCGTCACACTCAA+CGG | - | Chr8:55592699-55592718 | None:intergenic | 55.0% | |
TGAGTGTGACGGTAGCAGCA+GGG | + | Chr8:55592700-55592719 | MsG0880045191.01.T01:CDS | 55.0% | |
TTGAGTGTGACGGTAGCAGC+AGG | + | Chr8:55592699-55592718 | MsG0880045191.01.T01:CDS | 55.0% | |
! | ATGGCTTGTCTTCTGTGGCC+TGG | + | Chr8:55592561-55592580 | MsG0880045191.01.T01:CDS | 55.0% |
! | CGCCAGGGCCTTTTTGATGT+AGG | + | Chr8:55592237-55592256 | MsG0880045191.01.T01:CDS | 55.0% |
! | TAACTGGGATAGGTTGGCCG+AGG | + | Chr8:55592626-55592645 | MsG0880045191.01.T01:CDS | 55.0% |
!! | CTCCAGGTTCTGGTTCTGCA+TGG | - | Chr8:55592349-55592368 | None:intergenic | 55.0% |
!! | GGTTCTGGTTCTGCATGGCT+TGG | - | Chr8:55592344-55592363 | None:intergenic | 55.0% |
GACGGTAGCAGCAGGGATTC+AGG | + | Chr8:55592707-55592726 | MsG0880045191.01.T01:CDS | 60.0% | |
ACCTGGAGCCAGCCCTCAAC+TGG | + | Chr8:55592361-55592380 | MsG0880045191.01.T01:CDS | 65.0% | |
CCTGGAGCCAGCCCTCAACT+GGG | + | Chr8:55592362-55592381 | MsG0880045191.01.T01:CDS | 65.0% | |
!! | TGAGGGCTGGCTCCAGGTTC+TGG | - | Chr8:55592359-55592378 | None:intergenic | 65.0% |
GTCGCAGCCCAGTTGAGGGC+TGG | - | Chr8:55592372-55592391 | None:intergenic | 70.0% | |
!! | CCCAGTTGAGGGCTGGCTCC+AGG | - | Chr8:55592365-55592384 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 55591871 | 55593022 | 55591871 | ID=MsG0880045191.01;Name=MsG0880045191.01 |
Chr8 | mRNA | 55591871 | 55593022 | 55591871 | ID=MsG0880045191.01.T01;Parent=MsG0880045191.01;Name=MsG0880045191.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|383 |
Chr8 | exon | 55591871 | 55593022 | 55591871 | ID=MsG0880045191.01.T01:exon:23981;Parent=MsG0880045191.01.T01 |
Chr8 | CDS | 55591871 | 55593022 | 55591871 | ID=MsG0880045191.01.T01:cds;Parent=MsG0880045191.01.T01 |
Gene Sequence |
Protein sequence |