Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045499.01.T01 | XP_024629114.1 | 94.595 | 185 | 8 | 1 | 1 | 183 | 1 | 185 | 2.78E-116 | 344 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045499.01.T01 | Q9FN02 | 63.846 | 130 | 43 | 1 | 54 | 183 | 8 | 133 | 2.96E-54 | 180 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045499.01.T01 | A0A072TT43 | 94.595 | 185 | 8 | 1 | 1 | 183 | 1 | 185 | 1.33e-116 | 344 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180006034.01 | MsG0880045499.01 | 0.824539 | 7.642655e-54 | 6.789299e-51 |
MsG0780041470.01 | MsG0880045499.01 | 0.814173 | 1.762610e-51 | 1.174211e-48 |
MsG0380017776.01 | MsG0880045499.01 | 0.810296 | 1.237197e-50 | 7.429355e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045499.01.T01 | MTR_8g072600 | 94.595 | 185 | 8 | 1 | 1 | 183 | 1 | 185 | 3.37e-120 | 344 |
MsG0880045499.01.T01 | MTR_8g072600 | 94.595 | 185 | 8 | 1 | 1 | 183 | 1 | 185 | 2.16e-119 | 345 |
MsG0880045499.01.T01 | MTR_2g099710 | 44.882 | 127 | 65 | 2 | 57 | 183 | 173 | 294 | 1.18e-33 | 125 |
MsG0880045499.01.T01 | MTR_2g100160 | 28.916 | 166 | 112 | 3 | 19 | 183 | 52 | 212 | 3.34e-15 | 72.8 |
MsG0880045499.01.T01 | MTR_1g043240 | 38.372 | 86 | 43 | 2 | 99 | 184 | 34 | 109 | 2.11e-12 | 64.7 |
MsG0880045499.01.T01 | MTR_3g452710 | 33.621 | 116 | 72 | 2 | 68 | 183 | 165 | 275 | 2.12e-12 | 65.1 |
MsG0880045499.01.T01 | MTR_3g452710 | 33.621 | 116 | 72 | 2 | 68 | 183 | 232 | 342 | 2.14e-12 | 65.1 |
MsG0880045499.01.T01 | MTR_1g074880 | 38.372 | 86 | 43 | 2 | 99 | 184 | 34 | 109 | 2.35e-12 | 64.3 |
MsG0880045499.01.T01 | MTR_1g074880 | 38.372 | 86 | 43 | 2 | 99 | 184 | 34 | 109 | 2.37e-12 | 64.3 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 182 | 292 | 7.99e-12 | 63.2 |
MsG0880045499.01.T01 | MTR_7g112870 | 46.479 | 71 | 34 | 2 | 117 | 184 | 42 | 111 | 8.01e-12 | 62.8 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 192 | 302 | 9.82e-12 | 63.2 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 192 | 302 | 1.19e-11 | 62.8 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 83 | 193 | 1.25e-11 | 62.8 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 192 | 302 | 1.71e-11 | 62.4 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 192 | 302 | 1.73e-11 | 62.4 |
MsG0880045499.01.T01 | MTR_8g098980 | 51.724 | 58 | 27 | 1 | 127 | 184 | 54 | 110 | 1.97e-11 | 61.6 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 153 | 263 | 2.34e-11 | 62.0 |
MsG0880045499.01.T01 | MTR_2g100130 | 32.759 | 116 | 73 | 2 | 68 | 183 | 153 | 263 | 4.62e-11 | 61.2 |
MsG0880045499.01.T01 | MTR_5g081230 | 50.000 | 58 | 28 | 1 | 127 | 184 | 70 | 126 | 9.84e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045499.01.T01 | AT5G63870 | 63.846 | 130 | 43 | 1 | 54 | 183 | 8 | 133 | 3.19e-56 | 179 |
MsG0880045499.01.T01 | AT5G63870 | 63.846 | 130 | 43 | 1 | 54 | 183 | 8 | 133 | 3.02e-55 | 180 |
MsG0880045499.01.T01 | AT5G63870 | 63.846 | 130 | 43 | 1 | 54 | 183 | 8 | 133 | 3.02e-55 | 180 |
MsG0880045499.01.T01 | AT1G48120 | 61.290 | 124 | 42 | 1 | 52 | 175 | 584 | 701 | 6.79e-47 | 164 |
MsG0880045499.01.T01 | AT5G10900 | 47.727 | 132 | 65 | 1 | 54 | 185 | 154 | 281 | 6.01e-36 | 132 |
MsG0880045499.01.T01 | AT5G10900 | 47.727 | 132 | 65 | 1 | 54 | 185 | 154 | 281 | 6.32e-36 | 132 |
MsG0880045499.01.T01 | AT5G10900 | 47.727 | 132 | 65 | 1 | 54 | 185 | 154 | 281 | 7.20e-36 | 132 |
MsG0880045499.01.T01 | AT5G43380 | 39.080 | 87 | 43 | 2 | 99 | 185 | 34 | 110 | 2.46e-12 | 64.3 |
MsG0880045499.01.T01 | AT5G43380 | 39.080 | 87 | 43 | 2 | 99 | 185 | 34 | 110 | 3.76e-12 | 63.9 |
MsG0880045499.01.T01 | AT5G43380 | 39.080 | 87 | 43 | 2 | 99 | 185 | 34 | 110 | 3.84e-12 | 63.9 |
MsG0880045499.01.T01 | AT5G27840 | 46.479 | 71 | 34 | 2 | 117 | 184 | 46 | 115 | 8.59e-12 | 62.8 |
MsG0880045499.01.T01 | AT5G27840 | 46.479 | 71 | 34 | 2 | 117 | 184 | 46 | 115 | 9.20e-12 | 62.8 |
MsG0880045499.01.T01 | AT5G27840 | 46.479 | 71 | 34 | 2 | 117 | 184 | 46 | 115 | 1.01e-11 | 62.8 |
MsG0880045499.01.T01 | AT5G27840 | 46.479 | 71 | 34 | 2 | 117 | 184 | 46 | 115 | 1.01e-11 | 62.8 |
MsG0880045499.01.T01 | AT5G59160 | 36.782 | 87 | 45 | 2 | 98 | 184 | 43 | 119 | 1.06e-11 | 62.8 |
MsG0880045499.01.T01 | AT5G59160 | 36.782 | 87 | 45 | 2 | 98 | 184 | 43 | 119 | 1.06e-11 | 62.8 |
MsG0880045499.01.T01 | AT5G59160 | 36.782 | 87 | 45 | 2 | 98 | 184 | 43 | 119 | 1.06e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G42810 | 47.273 | 55 | 29 | 0 | 129 | 183 | 223 | 277 | 1.19e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G42810 | 47.273 | 55 | 29 | 0 | 129 | 183 | 223 | 277 | 1.19e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G42810 | 47.273 | 55 | 29 | 0 | 129 | 183 | 223 | 277 | 1.19e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G42810 | 47.273 | 55 | 29 | 0 | 129 | 183 | 276 | 330 | 1.31e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G42810 | 47.273 | 55 | 29 | 0 | 129 | 183 | 277 | 331 | 1.34e-11 | 62.8 |
MsG0880045499.01.T01 | AT2G29400 | 36.782 | 87 | 45 | 2 | 98 | 184 | 50 | 126 | 1.62e-11 | 62.0 |
MsG0880045499.01.T01 | AT1G69960 | 40.000 | 80 | 46 | 2 | 105 | 184 | 27 | 104 | 1.89e-11 | 62.0 |
MsG0880045499.01.T01 | AT3G05580 | 50.000 | 58 | 28 | 1 | 127 | 184 | 59 | 115 | 2.25e-11 | 61.6 |
MsG0880045499.01.T01 | AT3G05580 | 50.000 | 58 | 28 | 1 | 127 | 184 | 59 | 115 | 2.44e-11 | 61.2 |
MsG0880045499.01.T01 | AT4G11240 | 40.230 | 87 | 42 | 2 | 98 | 184 | 34 | 110 | 3.43e-11 | 61.2 |
MsG0880045499.01.T01 | AT3G46820 | 50.847 | 59 | 28 | 1 | 126 | 184 | 62 | 119 | 5.20e-11 | 60.5 |
MsG0880045499.01.T01 | AT2G39840 | 37.931 | 87 | 44 | 2 | 98 | 184 | 47 | 123 | 9.35e-11 | 60.1 |
Find 73 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGATGGTGGCGGTGGTTC+TGG | 0.077990 | 8:+60125795 | None:intergenic |
CGAAGGCGAGGGTTAGGTTT+TGG | 0.234161 | 8:+60125688 | None:intergenic |
TGAAACTTTCTTGCTCTTGT+TGG | 0.259196 | 8:-60125376 | MsG0880045499.01.T01:CDS |
CGTCTTCTGGCCAGGATATT+GGG | 0.263898 | 8:+60125733 | None:intergenic |
GCGTCTTCTGGCCAGGATAT+TGG | 0.274059 | 8:+60125732 | None:intergenic |
AGGGTGGCGGTGGTGGAATC+TGG | 0.294693 | 8:+60125846 | None:intergenic |
ATGATGGTGGCGGTGGTTCT+GGG | 0.296426 | 8:+60125796 | None:intergenic |
GCCGTTGAGGGTGGCGGTGG+TGG | 0.327661 | 8:+60125839 | None:intergenic |
CTTTCTTGCTCTTGTTGGCT+TGG | 0.339985 | 8:-60125371 | MsG0880045499.01.T01:CDS |
TCGGCATCGGTTGTCGTTGT+TGG | 0.349447 | 8:-60125516 | MsG0880045499.01.T01:CDS |
GGTTGAATAGGGACGCAATT+AGG | 0.358579 | 8:+60125561 | None:intergenic |
TTCGGAAGCAGGGAGATTCT+TGG | 0.366220 | 8:+60125656 | None:intergenic |
ACAACCGATGCCGAAGAATC+AGG | 0.379298 | 8:+60125525 | None:intergenic |
GAATCTGGTGGTGGTGATGA+GGG | 0.385989 | 8:+60125861 | None:intergenic |
GTCGTTGTTGGTGATGTTCA+TGG | 0.389146 | 8:-60125504 | MsG0880045499.01.T01:CDS |
CTTGCTCTTGTTGGCTTGGA+AGG | 0.390558 | 8:-60125367 | MsG0880045499.01.T01:CDS |
GGGGAGAATGGAAGGGAATT+CGG | 0.390888 | 8:+60125638 | None:intergenic |
TCGTCCCGAACCTGATTCTT+CGG | 0.407963 | 8:-60125535 | MsG0880045499.01.T01:CDS |
AGAGAATCGAAGACATGAAC+GGG | 0.413285 | 8:+60125618 | None:intergenic |
TCGGGACGAAAGGGTTGAAT+AGG | 0.415660 | 8:+60125549 | None:intergenic |
TTATGTTGATCGTGGAGCTT+GGG | 0.416779 | 8:-60125403 | MsG0880045499.01.T01:CDS |
TGGAGTTCTGCTGGTGGTTG+TGG | 0.422385 | 8:+60125759 | None:intergenic |
ACCAATCGAAGGCGAGGGTT+AGG | 0.422413 | 8:+60125682 | None:intergenic |
ATTGGGAGTTGGAGTTCTGC+TGG | 0.423033 | 8:+60125750 | None:intergenic |
GGAATCTGGTGGTGGTGATG+AGG | 0.424907 | 8:+60125860 | None:intergenic |
CGGTGTGATGGTGCCGTTGA+GGG | 0.429475 | 8:+60125827 | None:intergenic |
TCGACGGATACCCAGCATCT+TGG | 0.442965 | 8:+60125454 | None:intergenic |
ATTATGTTGATCGTGGAGCT+TGG | 0.454797 | 8:-60125404 | MsG0880045499.01.T01:CDS |
GGTGCCGTTGAGGGTGGCGG+TGG | 0.457742 | 8:+60125836 | None:intergenic |
GTGGCGGTGGTGGAATCTGG+TGG | 0.459075 | 8:+60125849 | None:intergenic |
ATGGAAGGGAATTCGGAAGC+AGG | 0.471418 | 8:+60125645 | None:intergenic |
GAAGACATGAACGGGGAGAA+TGG | 0.479711 | 8:+60125626 | None:intergenic |
GATGCCGAAGAATCAGGTTC+GGG | 0.484627 | 8:+60125531 | None:intergenic |
AGGTTCTTTGTGAAGCATCT+TGG | 0.487734 | 8:+60125581 | None:intergenic |
TCTGGTGGTGGTGATGAGGG+TGG | 0.488155 | 8:+60125864 | None:intergenic |
AGAATCAGGTTCGGGACGAA+AGG | 0.489315 | 8:+60125539 | None:intergenic |
CGATGCCGAAGAATCAGGTT+CGG | 0.489974 | 8:+60125530 | None:intergenic |
GAATCAGGTTCGGGACGAAA+GGG | 0.496658 | 8:+60125540 | None:intergenic |
CGGGACGAAAGGGTTGAATA+GGG | 0.505177 | 8:+60125550 | None:intergenic |
ACCTAACCCTCGCCTTCGAT+TGG | 0.506777 | 8:-60125683 | MsG0880045499.01.T01:CDS |
GCGGTGGTGGAATCTGGTGG+TGG | 0.508992 | 8:+60125852 | None:intergenic |
GGTGGTGATGAGGAGGATGA+TGG | 0.512499 | 8:+60125780 | None:intergenic |
GAGGAGGATGATGGTGGCGG+TGG | 0.513993 | 8:+60125789 | None:intergenic |
AACTCCAACTCCCAATATCC+TGG | 0.517691 | 8:-60125743 | MsG0880045499.01.T01:CDS |
CAGCATCTTGGAGAAGGAAA+AGG | 0.519491 | 8:+60125466 | None:intergenic |
ACATGAACGGGGAGAATGGA+AGG | 0.525366 | 8:+60125630 | None:intergenic |
GGTGGTGGTGATGAGGGTGG+TGG | 0.525917 | 8:+60125867 | None:intergenic |
GATGAGGAGGATGATGGTGG+CGG | 0.529975 | 8:+60125786 | None:intergenic |
CGAACCTGATTCTTCGGCAT+CGG | 0.530674 | 8:-60125529 | MsG0880045499.01.T01:CDS |
GATGGTGCCGTTGAGGGTGG+CGG | 0.530989 | 8:+60125833 | None:intergenic |
TCCACCACCGCCACCCTCAA+CGG | 0.531498 | 8:-60125840 | MsG0880045499.01.T01:CDS |
CTGGCCAGGATATTGGGAGT+TGG | 0.534285 | 8:+60125739 | None:intergenic |
TGGTTGTGGTGGTGATGAGG+AGG | 0.545132 | 8:+60125773 | None:intergenic |
GGTGATGAGGAGGATGATGG+TGG | 0.547735 | 8:+60125783 | None:intergenic |
TGGTGGTTGTGGTGGTGATG+AGG | 0.554850 | 8:+60125770 | None:intergenic |
GATACCCAGCATCTTGGAGA+AGG | 0.580519 | 8:+60125460 | None:intergenic |
TGGAAGACCAATCGAAGGCG+AGG | 0.583352 | 8:+60125676 | None:intergenic |
AGTTCTGCTGGTGGTTGTGG+TGG | 0.588793 | 8:+60125762 | None:intergenic |
TGGAAGGGAATTCGGAAGCA+GGG | 0.593869 | 8:+60125646 | None:intergenic |
TGTGATGGTGCCGTTGAGGG+TGG | 0.595134 | 8:+60125830 | None:intergenic |
GAGAGAATCGAAGACATGAA+CGG | 0.598768 | 8:+60125617 | None:intergenic |
AATGGTGATTATGTTGATCG+TGG | 0.609664 | 8:-60125411 | MsG0880045499.01.T01:CDS |
ACGCAAAACTAACCATCGAA+TGG | 0.610333 | 8:-60125713 | MsG0880045499.01.T01:CDS |
ACAAAGATTCGATCTTTCGA+CGG | 0.612299 | 8:+60125438 | None:intergenic |
CCGGTGTGATGGTGCCGTTG+AGG | 0.614995 | 8:+60125826 | None:intergenic |
GGGAGTTGGAGTTCTGCTGG+TGG | 0.626733 | 8:+60125753 | None:intergenic |
TATGTTGATCGTGGAGCTTG+GGG | 0.632970 | 8:-60125402 | MsG0880045499.01.T01:CDS |
GGAAGACCAATCGAAGGCGA+GGG | 0.638955 | 8:+60125677 | None:intergenic |
CCTCAACGGCACCATCACAC+CGG | 0.639797 | 8:-60125826 | MsG0880045499.01.T01:CDS |
ATTCTTGGAAGACCAATCGA+AGG | 0.642629 | 8:+60125671 | None:intergenic |
CATGAACGGGGAGAATGGAA+GGG | 0.669628 | 8:+60125631 | None:intergenic |
GAGAATCGAAGACATGAACG+GGG | 0.736800 | 8:+60125619 | None:intergenic |
GAAGCATCTTGGAAGCGATG+AGG | 0.738820 | 8:+60125592 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATCGAATCTTTGTTTTTAA+TGG | - | Chr8:60125818-60125837 | MsG0880045499.01.T01:CDS | 25.0% |
AATGGTGATTATGTTGATCG+TGG | - | Chr8:60125836-60125855 | MsG0880045499.01.T01:CDS | 35.0% | |
ACAAAGATTCGATCTTTCGA+CGG | + | Chr8:60125812-60125831 | None:intergenic | 35.0% | |
TGAAACTTTCTTGCTCTTGT+TGG | - | Chr8:60125871-60125890 | MsG0880045499.01.T01:CDS | 35.0% | |
ACGCAAAACTAACCATCGAA+TGG | - | Chr8:60125534-60125553 | MsG0880045499.01.T01:CDS | 40.0% | |
AGAGAATCGAAGACATGAAC+GGG | + | Chr8:60125632-60125651 | None:intergenic | 40.0% | |
ATTATGTTGATCGTGGAGCT+TGG | - | Chr8:60125843-60125862 | MsG0880045499.01.T01:CDS | 40.0% | |
ATTCTTGGAAGACCAATCGA+AGG | + | Chr8:60125579-60125598 | None:intergenic | 40.0% | |
GAGAGAATCGAAGACATGAA+CGG | + | Chr8:60125633-60125652 | None:intergenic | 40.0% | |
TTATGTTGATCGTGGAGCTT+GGG | - | Chr8:60125844-60125863 | MsG0880045499.01.T01:CDS | 40.0% | |
! | AGGTTCTTTGTGAAGCATCT+TGG | + | Chr8:60125669-60125688 | None:intergenic | 40.0% |
! | TTTTCCTTCTCCAAGATGCT+GGG | - | Chr8:60125783-60125802 | MsG0880045499.01.T01:CDS | 40.0% |
!!! | ATGGTTAGTTTTGCGTCTTC+TGG | + | Chr8:60125530-60125549 | None:intergenic | 40.0% |
!!! | TAGGTTTTGGATCCATTCGA+TGG | + | Chr8:60125549-60125568 | None:intergenic | 40.0% |
AACTCCAACTCCCAATATCC+TGG | - | Chr8:60125504-60125523 | MsG0880045499.01.T01:CDS | 45.0% | |
CAGCATCTTGGAGAAGGAAA+AGG | + | Chr8:60125784-60125803 | None:intergenic | 45.0% | |
GAGAATCGAAGACATGAACG+GGG | + | Chr8:60125631-60125650 | None:intergenic | 45.0% | |
GGTTGAATAGGGACGCAATT+AGG | + | Chr8:60125689-60125708 | None:intergenic | 45.0% | |
TATGTTGATCGTGGAGCTTG+GGG | - | Chr8:60125845-60125864 | MsG0880045499.01.T01:CDS | 45.0% | |
! | CTTTCTTGCTCTTGTTGGCT+TGG | - | Chr8:60125876-60125895 | MsG0880045499.01.T01:CDS | 45.0% |
! | CTTTTCCTTCTCCAAGATGC+TGG | - | Chr8:60125782-60125801 | MsG0880045499.01.T01:CDS | 45.0% |
!! | GTCGTTGTTGGTGATGTTCA+TGG | - | Chr8:60125743-60125762 | MsG0880045499.01.T01:CDS | 45.0% |
ACAACCGATGCCGAAGAATC+AGG | + | Chr8:60125725-60125744 | None:intergenic | 50.0% | |
ACATGAACGGGGAGAATGGA+AGG | + | Chr8:60125620-60125639 | None:intergenic | 50.0% | |
AGAATCAGGTTCGGGACGAA+AGG | + | Chr8:60125711-60125730 | None:intergenic | 50.0% | |
ATGGAAGGGAATTCGGAAGC+AGG | + | Chr8:60125605-60125624 | None:intergenic | 50.0% | |
ATTGGGAGTTGGAGTTCTGC+TGG | + | Chr8:60125500-60125519 | None:intergenic | 50.0% | |
CATGAACGGGGAGAATGGAA+GGG | + | Chr8:60125619-60125638 | None:intergenic | 50.0% | |
CGAACCTGATTCTTCGGCAT+CGG | - | Chr8:60125718-60125737 | MsG0880045499.01.T01:CDS | 50.0% | |
CGATGCCGAAGAATCAGGTT+CGG | + | Chr8:60125720-60125739 | None:intergenic | 50.0% | |
CGGGACGAAAGGGTTGAATA+GGG | + | Chr8:60125700-60125719 | None:intergenic | 50.0% | |
CGTCTTCTGGCCAGGATATT+GGG | + | Chr8:60125517-60125536 | None:intergenic | 50.0% | |
GAAGACATGAACGGGGAGAA+TGG | + | Chr8:60125624-60125643 | None:intergenic | 50.0% | |
GAATCAGGTTCGGGACGAAA+GGG | + | Chr8:60125710-60125729 | None:intergenic | 50.0% | |
GATACCCAGCATCTTGGAGA+AGG | + | Chr8:60125790-60125809 | None:intergenic | 50.0% | |
GATGCCGAAGAATCAGGTTC+GGG | + | Chr8:60125719-60125738 | None:intergenic | 50.0% | |
GGGGAGAATGGAAGGGAATT+CGG | + | Chr8:60125612-60125631 | None:intergenic | 50.0% | |
TCGGGACGAAAGGGTTGAAT+AGG | + | Chr8:60125701-60125720 | None:intergenic | 50.0% | |
TCGTCCCGAACCTGATTCTT+CGG | - | Chr8:60125712-60125731 | MsG0880045499.01.T01:CDS | 50.0% | |
TGGAAGGGAATTCGGAAGCA+GGG | + | Chr8:60125604-60125623 | None:intergenic | 50.0% | |
TTCGGAAGCAGGGAGATTCT+TGG | + | Chr8:60125594-60125613 | None:intergenic | 50.0% | |
! | GAAGCATCTTGGAAGCGATG+AGG | + | Chr8:60125658-60125677 | None:intergenic | 50.0% |
!! | CTTGCTCTTGTTGGCTTGGA+AGG | - | Chr8:60125880-60125899 | MsG0880045499.01.T01:CDS | 50.0% |
!! | GAATCTGGTGGTGGTGATGA+GGG | + | Chr8:60125389-60125408 | None:intergenic | 50.0% |
!! | TAGTTTTGCGTCTTCTGGCC+AGG | + | Chr8:60125525-60125544 | None:intergenic | 50.0% |
!! | TGGGTTTTGATCCGGTGTGA+TGG | + | Chr8:60125435-60125454 | None:intergenic | 50.0% |
!!! | GGTGGTTCTGGGTTTTGATC+CGG | + | Chr8:60125443-60125462 | None:intergenic | 50.0% |
ACCAATCGAAGGCGAGGGTT+AGG | + | Chr8:60125568-60125587 | None:intergenic | 55.0% | |
ACCTAACCCTCGCCTTCGAT+TGG | - | Chr8:60125564-60125583 | MsG0880045499.01.T01:CDS | 55.0% | |
AGTTCTGCTGGTGGTTGTGG+TGG | + | Chr8:60125488-60125507 | None:intergenic | 55.0% | |
CTGGCCAGGATATTGGGAGT+TGG | + | Chr8:60125511-60125530 | None:intergenic | 55.0% | |
GCGTCTTCTGGCCAGGATAT+TGG | + | Chr8:60125518-60125537 | None:intergenic | 55.0% | |
GGAAGACCAATCGAAGGCGA+GGG | + | Chr8:60125573-60125592 | None:intergenic | 55.0% | |
TCGACGGATACCCAGCATCT+TGG | + | Chr8:60125796-60125815 | None:intergenic | 55.0% | |
TGGAAGACCAATCGAAGGCG+AGG | + | Chr8:60125574-60125593 | None:intergenic | 55.0% | |
TGGAGTTCTGCTGGTGGTTG+TGG | + | Chr8:60125491-60125510 | None:intergenic | 55.0% | |
! | CGAAGGCGAGGGTTAGGTTT+TGG | + | Chr8:60125562-60125581 | None:intergenic | 55.0% |
! | GGTGATGAGGAGGATGATGG+TGG | + | Chr8:60125467-60125486 | None:intergenic | 55.0% |
! | GGTGGTGATGAGGAGGATGA+TGG | + | Chr8:60125470-60125489 | None:intergenic | 55.0% |
! | TGGTGGTTGTGGTGGTGATG+AGG | + | Chr8:60125480-60125499 | None:intergenic | 55.0% |
! | TGGTTGTGGTGGTGATGAGG+AGG | + | Chr8:60125477-60125496 | None:intergenic | 55.0% |
!! | ATGATGGTGGCGGTGGTTCT+GGG | + | Chr8:60125454-60125473 | None:intergenic | 55.0% |
!! | GATGAGGAGGATGATGGTGG+CGG | + | Chr8:60125464-60125483 | None:intergenic | 55.0% |
!! | GGAATCTGGTGGTGGTGATG+AGG | + | Chr8:60125390-60125409 | None:intergenic | 55.0% |
!! | TCGGCATCGGTTGTCGTTGT+TGG | - | Chr8:60125731-60125750 | MsG0880045499.01.T01:CDS | 55.0% |
CCTCAACGGCACCATCACAC+CGG | - | Chr8:60125421-60125440 | MsG0880045499.01.T01:CDS | 60.0% | |
GGGAGTTGGAGTTCTGCTGG+TGG | + | Chr8:60125497-60125516 | None:intergenic | 60.0% | |
!! | CGGTGTGATGGTGCCGTTGA+GGG | + | Chr8:60125423-60125442 | None:intergenic | 60.0% |
!! | GATGATGGTGGCGGTGGTTC+TGG | + | Chr8:60125455-60125474 | None:intergenic | 60.0% |
!! | TCTGGTGGTGGTGATGAGGG+TGG | + | Chr8:60125386-60125405 | None:intergenic | 60.0% |
!! | TGTGATGGTGCCGTTGAGGG+TGG | + | Chr8:60125420-60125439 | None:intergenic | 60.0% |
TCCACCACCGCCACCCTCAA+CGG | - | Chr8:60125407-60125426 | MsG0880045499.01.T01:CDS | 65.0% | |
! | GGTGGTGGTGATGAGGGTGG+TGG | + | Chr8:60125383-60125402 | None:intergenic | 65.0% |
!! | AGGGTGGCGGTGGTGGAATC+TGG | + | Chr8:60125404-60125423 | None:intergenic | 65.0% |
!! | CCGGTGTGATGGTGCCGTTG+AGG | + | Chr8:60125424-60125443 | None:intergenic | 65.0% |
!! | GAGGAGGATGATGGTGGCGG+TGG | + | Chr8:60125461-60125480 | None:intergenic | 65.0% |
!! | GATGGTGCCGTTGAGGGTGG+CGG | + | Chr8:60125417-60125436 | None:intergenic | 65.0% |
!! | GCGGTGGTGGAATCTGGTGG+TGG | + | Chr8:60125398-60125417 | None:intergenic | 65.0% |
!! | GTGGCGGTGGTGGAATCTGG+TGG | + | Chr8:60125401-60125420 | None:intergenic | 65.0% |
! | GCCGTTGAGGGTGGCGGTGG+TGG | + | Chr8:60125411-60125430 | None:intergenic | 75.0% |
!! | GGTGCCGTTGAGGGTGGCGG+TGG | + | Chr8:60125414-60125433 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 60125356 | 60125913 | 60125356 | ID=MsG0880045499.01;Name=MsG0880045499.01 |
Chr8 | mRNA | 60125356 | 60125913 | 60125356 | ID=MsG0880045499.01.T01;Parent=MsG0880045499.01;Name=MsG0880045499.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|185 |
Chr8 | exon | 60125356 | 60125913 | 60125356 | ID=MsG0880045499.01.T01:exon:12383;Parent=MsG0880045499.01.T01 |
Chr8 | CDS | 60125356 | 60125913 | 60125356 | ID=MsG0880045499.01.T01:cds;Parent=MsG0880045499.01.T01 |
Gene Sequence |
Protein sequence |