AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045523.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045523.01.T01 MTR_8g073210 94.279 804 32 1 109 912 152 941 0.0 1546
MsG0880045523.01.T01 MTR_8g073210 98.901 91 1 0 25 115 1 91 1.30e-46 181
MsG0880045523.01.T01 MTR_5g024350 68.625 800 235 2 113 910 187 972 0.0 1155
MsG0880045523.01.T01 MTR_5g024350 72.340 94 25 1 21 114 29 121 2.77e-32 135
MsG0880045523.01.T01 MTR_5g024350 68.625 800 235 2 113 910 155 940 0.0 1153
MsG0880045523.01.T01 MTR_5g024350 73.333 90 23 1 25 114 1 89 2.65e-31 132
MsG0880045523.01.T01 MTR_8g073210 96.761 494 16 0 109 602 152 645 0.0 999
MsG0880045523.01.T01 MTR_8g073210 98.901 91 1 0 25 115 1 91 2.34e-47 180
MsG0880045523.01.T01 MTR_8g073210 96.894 483 15 0 109 591 152 634 0.0 978
MsG0880045523.01.T01 MTR_8g073210 98.901 91 1 0 25 115 1 91 1.48e-47 180
MsG0880045523.01.T01 MTR_3g115910 58.908 769 289 5 113 879 198 941 0.0 931
MsG0880045523.01.T01 MTR_3g115910 58.908 769 289 5 113 879 153 896 0.0 931
MsG0880045523.01.T01 MTR_8g073490 56.194 783 313 8 113 885 154 916 0.0 879
MsG0880045523.01.T01 MTR_8g073490 40.187 107 59 2 25 131 1 102 2.05e-16 84.7
MsG0880045523.01.T01 MTR_2g088450 52.168 784 342 6 109 877 156 921 0.0 828
MsG0880045523.01.T01 MTR_2g088450 52.168 784 342 6 109 877 91 856 0.0 827
MsG0880045523.01.T01 MTR_2g088450 52.168 784 342 6 109 877 58 823 0.0 827
MsG0880045523.01.T01 MTR_3g115910 60.218 641 233 4 113 751 153 773 0.0 792
MsG0880045523.01.T01 MTR_8g073210 96.675 391 13 0 109 499 152 542 0.0 791
MsG0880045523.01.T01 MTR_8g073210 98.901 91 1 0 25 115 1 91 3.40e-48 181
MsG0880045523.01.T01 MTR_2g088430 44.103 780 401 9 99 867 143 898 0.0 685
MsG0880045523.01.T01 MTR_2g088450 54.821 560 235 2 109 668 156 697 0.0 624
MsG0880045523.01.T01 MTR_3g115910 58.836 481 190 3 113 591 153 627 0.0 593
MsG0880045523.01.T01 MTR_3g115910 58.836 481 190 3 113 591 198 672 0.0 593
MsG0880045523.01.T01 MTR_2g088450 53.057 507 230 2 109 611 156 658 0.0 556
MsG0880045523.01.T01 MTR_2g088450 53.057 507 230 2 109 611 58 560 0.0 555
MsG0880045523.01.T01 MTR_2g088450 52.761 489 227 1 109 597 58 542 0.0 537
MsG0880045523.01.T01 MTR_3g105610 36.644 745 421 17 113 833 163 880 6.95e-138 436
MsG0880045523.01.T01 MTR_3g105595 35.203 838 474 22 113 910 48 856 1.59e-136 429
MsG0880045523.01.T01 MTR_4g087925 30.040 749 439 20 115 840 168 854 4.84e-93 315
MsG0880045523.01.T01 MTR_2g015270 29.698 761 436 24 115 849 166 853 9.60e-87 300
MsG0880045523.01.T01 MTR_2g015280 28.344 755 433 26 115 847 161 829 3.36e-75 265
MsG0880045523.01.T01 MTR_2g015310 27.727 761 438 27 101 836 154 827 7.36e-75 264
MsG0880045523.01.T01 MTR_0018s0240 26.970 812 469 23 50 826 29 751 9.18e-74 259
MsG0880045523.01.T01 MTR_5g059920 28.249 754 448 23 115 836 165 857 1.21e-73 261
MsG0880045523.01.T01 MTR_2g015290 26.897 751 452 24 117 847 164 837 1.02e-71 256
MsG0880045523.01.T01 MTR_2g015260 27.568 740 412 24 167 882 33 672 1.06e-65 234
MsG0880045523.01.T01 MTR_5g059900 32.245 490 289 11 356 836 293 748 3.07e-65 234
MsG0880045523.01.T01 MTR_0018s0230 30.707 495 293 12 359 832 275 740 1.02e-62 228
MsG0880045523.01.T01 MTR_5g059920 28.550 662 391 21 115 755 165 765 1.39e-60 221
MsG0880045523.01.T01 MTR_0018s0230 30.787 432 259 12 356 779 272 671 1.47e-51 193
MsG0880045523.01.T01 MTR_6g045087 32.609 414 243 12 430 823 40 437 2.32e-49 182
MsG0880045523.01.T01 MTR_5g060330 25.169 445 271 15 115 535 71 477 1.84e-26 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045523.01.T01 AT3G51480 59.155 781 290 6 109 886 148 902 0.0 965
MsG0880045523.01.T01 AT3G51480 38.636 88 48 3 29 114 3 86 9.00e-12 69.7
MsG0880045523.01.T01 AT3G51480 59.155 781 290 6 109 886 148 902 0.0 965
MsG0880045523.01.T01 AT3G51480 38.636 88 48 3 29 114 3 86 9.00e-12 69.7
MsG0880045523.01.T01 AT3G51480 59.155 781 290 6 109 886 58 812 0.0 964
MsG0880045523.01.T01 AT1G42540 58.116 807 302 12 113 907 151 933 0.0 920
MsG0880045523.01.T01 AT1G42540 58.116 807 302 12 113 907 151 933 0.0 920
MsG0880045523.01.T01 AT1G42540 58.116 807 302 12 113 907 151 933 0.0 920
MsG0880045523.01.T01 AT4G35290 53.680 788 332 7 109 886 148 912 0.0 863
MsG0880045523.01.T01 AT4G35290 53.680 788 332 7 109 886 148 912 0.0 863
MsG0880045523.01.T01 AT4G35290 53.680 788 332 7 109 886 148 912 0.0 863
MsG0880045523.01.T01 AT4G35290 53.680 788 332 7 109 886 148 912 0.0 863
MsG0880045523.01.T01 AT4G35290 53.680 788 332 7 109 886 148 912 0.0 863
MsG0880045523.01.T01 AT2G17260 52.859 787 336 10 109 884 152 914 0.0 840
MsG0880045523.01.T01 AT1G05200 53.776 768 322 5 113 867 183 930 0.0 836
MsG0880045523.01.T01 AT1G05200 53.776 768 322 5 113 867 183 930 0.0 836
MsG0880045523.01.T01 AT1G05200 53.776 768 322 5 113 867 183 930 0.0 836
MsG0880045523.01.T01 AT3G51480 59.565 643 234 4 109 751 148 764 0.0 804
MsG0880045523.01.T01 AT3G51480 38.636 88 48 3 29 114 3 86 1.07e-11 69.3
MsG0880045523.01.T01 AT2G32390 51.172 768 348 5 113 867 68 821 0.0 776
MsG0880045523.01.T01 AT2G32390 51.172 768 348 5 113 867 170 923 0.0 776
MsG0880045523.01.T01 AT2G32390 51.172 768 348 5 113 867 112 865 0.0 776
MsG0880045523.01.T01 AT1G05200 56.250 640 259 3 113 751 183 802 0.0 735
MsG0880045523.01.T01 AT1G05200 56.250 640 259 3 113 751 183 802 0.0 735
MsG0880045523.01.T01 AT4G35290 55.178 647 263 5 109 751 148 771 0.0 729
MsG0880045523.01.T01 AT2G32400 42.600 777 398 13 113 872 153 898 0.0 617
MsG0880045523.01.T01 AT1G42540 56.375 502 208 6 113 609 151 646 0.0 575
MsG0880045523.01.T01 AT1G05200 55.533 497 212 2 113 609 183 670 0.0 569
MsG0880045523.01.T01 AT2G32390 51.644 517 247 1 113 629 170 683 0.0 556
MsG0880045523.01.T01 AT2G32390 51.644 517 247 1 113 629 170 683 0.0 556
MsG0880045523.01.T01 AT2G32390 51.953 512 232 1 113 624 170 667 0.0 553
MsG0880045523.01.T01 AT1G05200 55.000 480 210 1 113 592 183 656 0.0 548
MsG0880045523.01.T01 AT2G32390 52.192 479 229 0 113 591 170 648 4.37e-178 530
MsG0880045523.01.T01 AT2G29120 33.377 758 455 16 113 863 161 875 8.42e-132 419
MsG0880045523.01.T01 AT5G27100 33.960 745 429 19 113 839 154 853 2.65e-131 417
MsG0880045523.01.T01 AT2G24720 35.924 682 385 15 117 784 158 801 8.30e-129 410
MsG0880045523.01.T01 AT2G29100 34.474 760 440 19 113 863 154 864 4.14e-128 409
MsG0880045523.01.T01 AT2G29100 34.474 760 440 19 113 863 152 862 4.83e-128 409
MsG0880045523.01.T01 AT2G29110 33.580 810 468 19 72 863 114 871 1.78e-127 408
MsG0880045523.01.T01 AT2G29110 33.580 810 468 19 72 863 113 870 1.97e-127 408
MsG0880045523.01.T01 AT5G11180 32.342 807 482 21 45 836 104 861 2.54e-126 405
MsG0880045523.01.T01 AT2G24710 34.200 731 422 16 117 820 157 855 3.02e-122 392
MsG0880045523.01.T01 AT5G11210 32.558 731 448 17 117 836 81 777 4.05e-122 390
MsG0880045523.01.T01 AT2G24710 34.200 731 422 16 117 820 181 879 4.65e-122 393
MsG0880045523.01.T01 AT5G11210 32.558 731 448 17 117 836 105 801 8.61e-122 390
MsG0880045523.01.T01 AT5G11210 32.558 731 448 17 117 836 163 859 2.76e-121 390
MsG0880045523.01.T01 AT4G31710 34.407 683 387 16 113 784 154 786 8.39e-117 378
MsG0880045523.01.T01 AT4G31710 33.480 681 389 15 113 784 177 802 3.86e-112 366
MsG0880045523.01.T01 AT2G24710 34.526 643 382 12 117 751 181 792 1.26e-111 362
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 81 699 5.80e-109 352
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 81 699 6.90e-109 352
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 81 699 6.90e-109 352
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 89 707 1.12e-108 352
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 163 781 2.87e-108 353
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 163 781 2.87e-108 353
MsG0880045523.01.T01 AT5G11210 32.925 653 394 16 117 759 163 781 3.54e-108 352
MsG0880045523.01.T01 AT3G07520 29.660 735 425 19 115 834 170 827 5.42e-86 294
MsG0880045523.01.T01 AT5G48400 28.499 793 455 23 88 855 130 835 1.13e-81 282
MsG0880045523.01.T01 AT5G48410 28.153 785 461 21 88 855 132 830 5.42e-79 275
MsG0880045523.01.T01 AT5G48400 28.882 689 384 21 88 751 130 737 1.02e-74 260
MsG0880045523.01.T01 AT5G48410 28.928 681 389 19 88 751 132 734 2.31e-73 257
MsG0880045523.01.T01 AT5G11180 30.019 533 335 14 45 568 104 607 1.26e-67 243
MsG0880045523.01.T01 AT5G11180 37.879 198 118 4 641 836 606 800 6.40e-29 125
MsG0880045523.01.T01 AT5G48410 26.783 743 426 18 121 855 171 803 6.19e-65 234
MsG0880045523.01.T01 AT5G48410 26.380 743 425 18 121 855 171 799 1.14e-61 225
MsG0880045523.01.T01 AT5G11210 36.364 341 198 6 500 836 26 351 2.02e-61 214
MsG0880045523.01.T01 AT3G04110 24.695 737 443 21 117 834 155 798 6.08e-61 223
MsG0880045523.01.T01 AT3G04110 26.923 546 324 15 117 655 155 632 7.87e-56 207
MsG0880045523.01.T01 AT3G04110 22.795 737 429 21 117 834 155 770 1.03e-47 183

Find 208 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATGTACCTTAATGAATT+TGG 0.113921 8:-60523789 MsG0880045523.01.T01:three_prime_UTR
CAACTTTCTTCACCTATTAA+AGG 0.155013 8:-60524796 MsG0880045523.01.T01:CDS
TGACCTGTCAACTGCCATTT+TGG 0.204994 8:-60524303 MsG0880045523.01.T01:CDS
CCTCTTGGTTTAAGTACTTA+TGG 0.207699 8:-60526248 MsG0880045523.01.T01:CDS
TACAAATCCCCAGCCATTTC+TGG 0.213798 8:+60524522 None:intergenic
GACTCAATCTCAAGAGCTTT+TGG 0.222344 8:-60524187 MsG0880045523.01.T01:CDS
GATCGTTCGAAAATGTAATT+TGG 0.227637 8:+60526159 None:intergenic
AAACTTTCAATGCCTTTAAT+AGG 0.239650 8:+60524784 None:intergenic
GTCCACATCATTGGTGTAAA+TGG 0.257634 8:+60525336 None:intergenic
GTACCTCCATTTGTAAATAT+TGG 0.267333 8:-60527393 MsG0880045523.01.T01:CDS
ATGCAGCAATGCCACCCTTT+TGG 0.268805 8:+60524620 None:intergenic
AATTCTGATCCTGCTATTCT+TGG 0.278084 8:-60527297 MsG0880045523.01.T01:CDS
CGGTTTGAATAAAATATATT+AGG 0.282639 8:+60524123 None:intergenic
TTTAACAGCTTTCCATTGTT+TGG 0.295873 8:+60525789 None:intergenic
CGCACAAGCTCAGTATTACT+TGG 0.296784 8:+60525603 None:intergenic
AAAAGCTACTCACGGTCTTT+TGG 0.308105 8:-60525851 MsG0880045523.01.T01:CDS
CCATATGGAACAAACTTATA+GGG 0.308769 8:+60525642 None:intergenic
ACCATATGGAACAAACTTAT+AGG 0.311472 8:+60525641 None:intergenic
AATATTAGAAGAATCAATTC+TGG 0.314542 8:+60523835 None:intergenic
TTCATTAAGGTACATAGAAA+TGG 0.317597 8:+60523794 None:intergenic
AAACCCAACCGCGTGGTCTC+TGG 0.318510 8:+60525814 None:intergenic
TCTCTTGGAATGTTGCAAAA+TGG 0.320334 8:-60526455 MsG0880045523.01.T01:CDS
CCCTATAAGTTTGTTCCATA+TGG 0.321475 8:-60525642 MsG0880045523.01.T01:CDS
ATTGTTGCTACTTGTTGTTT+AGG 0.327820 8:+60525231 None:intergenic
AGTTTGGTTTGTGGTGTTGA+TGG 0.327891 8:-60527469 MsG0880045523.01.T01:CDS
TACTAGTGGGAGCTGTTGTT+TGG 0.333434 8:-60525293 MsG0880045523.01.T01:CDS
GAGTCTTCTGTCCAAGGTTC+AGG 0.349962 8:-60524065 MsG0880045523.01.T01:CDS
CTCTTCAACTGTGGCTGGCT+TGG 0.353662 8:-60527427 MsG0880045523.01.T01:CDS
ACTTTCTGCCAACTCCAAAA+TGG 0.354837 8:+60524289 None:intergenic
ATCATCAATGTGATCGGAAC+AGG 0.355557 8:-60525972 MsG0880045523.01.T01:CDS
ACAGTCGGTCAGACTATATT+AGG 0.358118 8:+60523861 None:intergenic
TTGCAACCATGATTAGAGTT+TGG 0.359034 8:-60527485 MsG0880045523.01.T01:CDS
AGATCCTGTTGGTTACTTGC+AGG 0.359603 8:-60524749 MsG0880045523.01.T01:CDS
GCAGACATTGTTAGCCACTA+TGG 0.360865 8:-60526716 MsG0880045523.01.T01:CDS
TCCTCTCTCTTCAGATGAAA+TGG 0.361384 8:-60526381 MsG0880045523.01.T01:CDS
TCACGGTAACTAGACCTTCT+AGG 0.364616 8:+60525756 None:intergenic
CTGGCGTAACAGGTCCATTC+AGG 0.367570 8:-60526034 MsG0880045523.01.T01:CDS
GTTAACATGACTGGCGTAAC+AGG 0.372471 8:-60526044 MsG0880045523.01.T01:CDS
GATTACTGACAGGCTAGTTC+AGG 0.374092 8:-60526555 MsG0880045523.01.T01:CDS
AGTCTTTCCACTAGTCAAAT+TGG 0.376639 8:+60526280 None:intergenic
CAGTGGATCCAAATTCATTA+AGG 0.378935 8:+60523781 None:intergenic
GGACTCGCAGGGTTGGTTAT+TGG 0.380062 8:-60525950 MsG0880045523.01.T01:CDS
TCAAAAGATCGTTCATTTCT+CGG 0.381113 8:-60526307 MsG0880045523.01.T01:CDS
AGGAATGGAATTAGTGCGTT+GGG 0.388717 8:-60526650 MsG0880045523.01.T01:CDS
ACTCAGCCCTATATTGAGTC+TGG 0.390396 8:-60525417 MsG0880045523.01.T01:CDS
ATGTTCTCTTCAACTGTGGC+TGG 0.391422 8:-60527432 MsG0880045523.01.T01:CDS
TGGGGTCTTTACCTAGTTTG+TGG 0.392293 8:-60524167 MsG0880045523.01.T01:CDS
TTCGCCACACTCAACACCTT+TGG 0.393024 8:+60526479 None:intergenic
TCTTTACCTAGTTTGTGGTT+TGG 0.400014 8:-60524162 MsG0880045523.01.T01:CDS
AGTGCCTTCATAGTTTCTTC+AGG 0.402817 8:+60524655 None:intergenic
GGTCAAGAGTTTACCAGAAA+TGG 0.403913 8:-60524535 MsG0880045523.01.T01:CDS
TTACCGTGAATTTGTTTCTC+AGG 0.408348 8:-60525742 MsG0880045523.01.T01:CDS
TCTACACACAAGTACTGCTT+GGG 0.411747 8:-60526504 MsG0880045523.01.T01:CDS
CAATACTAGTGTTGGTAGAA+TGG 0.417139 8:-60527355 MsG0880045523.01.T01:CDS
GGTCTCTGGGTTGTTTCTCC+TGG 0.420141 8:+60525828 None:intergenic
CACTAGGCCAGACTCAATAT+AGG 0.420531 8:+60525410 None:intergenic
AGAGAGGTTATCGCAGTCTA+TGG 0.421984 8:-60526689 MsG0880045523.01.T01:CDS
CCACGTGGTTTATTTAACTT+TGG 0.425486 8:+60526137 None:intergenic
AACTTATAGGGGACAGCATA+AGG 0.430447 8:+60525654 None:intergenic
TCTTATTTGATTGACGAAAT+CGG 0.435850 8:-60524712 MsG0880045523.01.T01:CDS
TCAACTGCTAATGGTGAGTC+TGG 0.437387 8:+60524323 None:intergenic
CTTGTTTCAGAAATGTATCA+AGG 0.437828 8:+60526186 None:intergenic
ATCTCCTCACTCGTTGCATC+AGG 0.439501 8:+60526575 None:intergenic
TGATTATCAATGGAACGATT+AGG 0.439510 8:+60525873 None:intergenic
GGTTATTGGTCTAATTACTC+TGG 0.442948 8:-60525936 MsG0880045523.01.T01:CDS
TTGAGTGTGGCGAAGTCTCT+TGG 0.444659 8:-60526470 MsG0880045523.01.T01:CDS
AACCCAGAGACCACGCGGTT+GGG 0.453927 8:-60525817 MsG0880045523.01.T01:CDS
AACCCAACCGCGTGGTCTCT+GGG 0.459170 8:+60525815 None:intergenic
GGATTTGCAAGGTTTCCATC+AGG 0.463009 8:+60526005 None:intergenic
AAGACTGCAAATGGTCCTCT+TGG 0.463411 8:-60526263 MsG0880045523.01.T01:CDS
ACTAGGCCAGACTCAATATA+GGG 0.465251 8:+60525411 None:intergenic
TGTTGCAAAATGGTTATGTC+TGG 0.467859 8:-60526445 MsG0880045523.01.T01:CDS
TTCTACACACAAGTACTGCT+TGG 0.472526 8:-60526505 MsG0880045523.01.T01:CDS
GATGAAATGGATAACATTCA+AGG 0.475159 8:-60526368 MsG0880045523.01.T01:CDS
CAATAATCCGAGATTCTGCC+AGG 0.479639 8:+60526528 None:intergenic
AAAAGTAAAACAAATGTAGT+AGG 0.480220 8:+60523721 None:intergenic
GCTGTTACAGTCCACATCAT+TGG 0.480895 8:+60525327 None:intergenic
CATGATTAGAGTTTGGTTTG+TGG 0.483447 8:-60527478 MsG0880045523.01.T01:CDS
CATTCACTATTGCAGCTGCT+GGG 0.484569 8:-60523746 MsG0880045523.01.T01:intron
AGAAGACGGATTCAAATGCT+TGG 0.491483 8:-60525371 MsG0880045523.01.T01:CDS
TTTGATGTTCTCTTCAACTG+TGG 0.491957 8:-60527436 MsG0880045523.01.T01:CDS
TACAAAGGATCCATGACAAA+TGG 0.492622 8:-60524259 MsG0880045523.01.T01:CDS
TAAAATCACACCGGCTTGAA+AGG 0.493331 8:+60524566 None:intergenic
GTTGACAGGTCAACTGCTAA+TGG 0.494222 8:+60524314 None:intergenic
ACAGAAGACTCTAGTTCGTC+TGG 0.494315 8:+60524077 None:intergenic
TGATCGGAACAGGGACTCGC+AGG 0.494556 8:-60525962 MsG0880045523.01.T01:CDS
GATCCTGTTGGTTACTTGCA+GGG 0.494704 8:-60524748 MsG0880045523.01.T01:CDS
AAACAACAGCTCCCACTAGT+AGG 0.496237 8:+60525295 None:intergenic
CAGGCTAGTTCAGGTTGCCC+TGG 0.496704 8:-60526546 MsG0880045523.01.T01:CDS
GAAGACGGATTCAAATGCTT+GGG 0.497049 8:-60525370 MsG0880045523.01.T01:CDS
TCATTAAGGTACATAGAAAT+GGG 0.497551 8:+60523795 None:intergenic
AGAACTCCAATATTTACAAA+TGG 0.499369 8:+60527387 None:intergenic
ACTAGTGGAAAGACTGCAAA+TGG 0.499976 8:-60526272 MsG0880045523.01.T01:CDS
GTTGCTACTTGTTGTTTAGG+AGG 0.501769 8:+60525234 None:intergenic
GAACCCTGCAAGTAACCAAC+AGG 0.502075 8:+60524745 None:intergenic
CTAAGAGCCGCTCGAAGAGA+AGG 0.504433 8:-60523989 MsG0880045523.01.T01:CDS
CACAAACCAAACTCTAATCA+TGG 0.505197 8:+60527479 None:intergenic
AGGTTGCCCTGGCAGAATCT+CGG 0.506830 8:-60526535 MsG0880045523.01.T01:CDS
GAAAATACTAAGAGCACTCT+TGG 0.509240 8:-60524907 MsG0880045523.01.T01:CDS
AAGAGTTTACCAGAAATGGC+TGG 0.509618 8:-60524531 MsG0880045523.01.T01:CDS
TATAGAAGCACAAGTGAGGT+TGG 0.517311 8:-60523948 MsG0880045523.01.T01:CDS
CCATCAGGTGTATACCTGAA+TGG 0.517551 8:+60526020 None:intergenic
CTTGTGCGTCTGATCACTGC+CGG 0.518183 8:-60525588 MsG0880045523.01.T01:CDS
ACTATGAAGGCACTGGAGAA+AGG 0.518238 8:-60524646 MsG0880045523.01.T01:CDS
ATATTAGAAGAATCAATTCT+GGG 0.518346 8:+60523836 None:intergenic
CTGGAGAAAGGTCCCCAAAA+GGG 0.519821 8:-60524634 MsG0880045523.01.T01:CDS
ATATATGTGGTTAACATGAC+TGG 0.520542 8:-60526053 MsG0880045523.01.T01:CDS
CCATTCAGGTATACACCTGA+TGG 0.523319 8:-60526020 MsG0880045523.01.T01:CDS
CTTGATACATTTCTGAAACA+AGG 0.523811 8:-60526185 MsG0880045523.01.T01:CDS
GTGCTTCTTGTACTGCCTCA+CGG 0.524012 8:+60524103 None:intergenic
ACAATCCACTGACACGTTCA+AGG 0.524104 8:-60525718 MsG0880045523.01.T01:CDS
ACTCCAAAATGGCAGTTGAC+AGG 0.525035 8:+60524300 None:intergenic
GCACTGTGAGGATTGAAGTC+AGG 0.525881 8:+60524821 None:intergenic
TACTCTTTCAATACTAGTGT+TGG 0.527577 8:-60527363 MsG0880045523.01.T01:CDS
CGGTGGACCAATTTGACTAG+TGG 0.530260 8:-60526287 MsG0880045523.01.T01:CDS
TGAAGAAACTATGAAGGCAC+TGG 0.532634 8:-60524653 MsG0880045523.01.T01:CDS
AGAGTTTACCAGAAATGGCT+GGG 0.533870 8:-60524530 MsG0880045523.01.T01:CDS
TTAGTATTACCAAGAATAGC+AGG 0.536839 8:+60527288 None:intergenic
ACATTGATGATCTCATATGC+TGG 0.542115 8:+60525984 None:intergenic
CACTAATTCCATTCCTCCCA+TGG 0.545676 8:+60526657 None:intergenic
ACTGGAGAAAGGTCCCCAAA+AGG 0.545834 8:-60524635 MsG0880045523.01.T01:CDS
ACATTGTTAGCCACTATGGT+TGG 0.545880 8:-60526712 MsG0880045523.01.T01:CDS
CCGCTCGAAGAGAAGGCAAA+CGG 0.549877 8:-60523982 MsG0880045523.01.T01:CDS
TAAAATATATTAGGAGTGCA+AGG 0.551776 8:+60524132 None:intergenic
AATCAAATAAGACCGGGAAA+AGG 0.553640 8:+60524723 None:intergenic
CGAAGAGAAGGCAAACGGAA+AGG 0.554849 8:-60523977 MsG0880045523.01.T01:CDS
TGCTCAAGAGCCATTTGTCA+TGG 0.556307 8:+60524249 None:intergenic
TTTCGTCAATCAAATAAGAC+CGG 0.557477 8:+60524716 None:intergenic
TTGAATCTTCTTGCAGTGAG+AGG 0.559743 8:+60527259 None:intergenic
CAGAAATGTATCAAGGGCAC+GGG 0.562923 8:+60526193 None:intergenic
GATGACGACCATGGGAGGAA+TGG 0.563245 8:-60526665 MsG0880045523.01.T01:CDS
AAGTTTGTTCCATATGGTGA+TGG 0.563790 8:-60525636 MsG0880045523.01.T01:CDS
TCAGAAATGTATCAAGGGCA+CGG 0.563879 8:+60526192 None:intergenic
AACACCTGAAGAAACTATGA+AGG 0.564484 8:-60524659 MsG0880045523.01.T01:CDS
GTACCTGAGAAACAAATTCA+CGG 0.565692 8:+60525739 None:intergenic
TTGTTTCAGAAATGTATCAA+GGG 0.571587 8:+60526187 None:intergenic
CAACCCAGAGACCACGCGGT+TGG 0.572070 8:-60525818 MsG0880045523.01.T01:CDS
GTAAATAGCAAAGATCCTGT+TGG 0.573454 8:-60524760 MsG0880045523.01.T01:CDS
AAGTACTGCTTGGGGTCCAA+AGG 0.573606 8:-60526495 MsG0880045523.01.T01:CDS
GTTACGTAAAAGTATATATG+TGG 0.574540 8:-60526066 MsG0880045523.01.T01:CDS
TACTACAGAGAGAACAAAGA+TGG 0.576261 8:-60525448 MsG0880045523.01.T01:CDS
CAGGTCTTTGATGCTGCAGT+AGG 0.576880 8:-60525483 MsG0880045523.01.T01:CDS
GACGCGAAGATCCTGAACCT+TGG 0.577080 8:+60524054 None:intergenic
TAACCTCTCTCCAACCATAG+TGG 0.577168 8:+60526702 None:intergenic
TAATGGTGAGTCTGGTGGAA+AGG 0.578873 8:+60524331 None:intergenic
GAGGAATGGAATTAGTGCGT+TGG 0.579148 8:-60526651 MsG0880045523.01.T01:CDS
CTACAAATAGCCATATAAGC+AGG 0.579605 8:+60524875 None:intergenic
TAGAGCTCTTCCTTTCAAGC+CGG 0.579652 8:-60524576 MsG0880045523.01.T01:CDS
TCTGACTGTAGTGTAATGTA+CGG 0.580824 8:-60523663 MsG0880045523.01.T01:three_prime_UTR
TGGCCTAGTGGTAGTAGCAT+CGG 0.581377 8:-60525397 MsG0880045523.01.T01:CDS
TATGAGATCATCAATGTGAT+CGG 0.583442 8:-60525978 MsG0880045523.01.T01:CDS
GTTCAGGATCTTCGCGTCTG+CGG 0.583707 8:-60524049 MsG0880045523.01.T01:CDS
CACCATTTACACCAATGATG+TGG 0.585547 8:-60525338 MsG0880045523.01.T01:CDS
GGAACAGGGACTCGCAGGGT+TGG 0.586929 8:-60525957 MsG0880045523.01.T01:CDS
AGTAGCATCGGTTAAGAAGA+CGG 0.589897 8:-60525385 MsG0880045523.01.T01:CDS
GAACTAGAGTCTTCTGTCCA+AGG 0.593062 8:-60524071 MsG0880045523.01.T01:CDS
TCTATGGTGATGACGACCAT+GGG 0.593461 8:-60526673 MsG0880045523.01.T01:CDS
GAATGGAATTAGTGCGTTGG+GGG 0.594834 8:-60526648 MsG0880045523.01.T01:CDS
TCTCATATGCTGGATTTGCA+AGG 0.596344 8:+60525994 None:intergenic
CTATATTGAGTCTGGCCTAG+TGG 0.597390 8:-60525409 MsG0880045523.01.T01:CDS
AACATGCCAAACCACAAACT+AGG 0.599895 8:+60524156 None:intergenic
CAGAAAGTGGAGATTTACAA+AGG 0.600704 8:-60524274 MsG0880045523.01.T01:CDS
CAATCCACTGACACGTTCAA+GGG 0.601335 8:-60525717 MsG0880045523.01.T01:CDS
TCCATTTCATCTGAAGAGAG+AGG 0.604671 8:+60526380 None:intergenic
CATATGGAACAAACTTATAG+GGG 0.604895 8:+60525643 None:intergenic
ACTCCAATATTTACAAATGG+AGG 0.606150 8:+60527390 None:intergenic
GAATCCCTTGAACGTGTCAG+TGG 0.606605 8:+60525713 None:intergenic
TTTGAATAAAGTGTTTCTGG+AGG 0.607346 8:+60525900 None:intergenic
ACATAGAAATGGGCAACAGT+TGG 0.612922 8:+60523805 None:intergenic
ACTGCTAATGGTGAGTCTGG+TGG 0.613520 8:+60524326 None:intergenic
GCACAAGCTCAGTATTACTT+GGG 0.614739 8:+60525604 None:intergenic
GACTCCTGATGCAACGAGTG+AGG 0.616464 8:-60526579 MsG0880045523.01.T01:CDS
GGAATGGAATTAGTGCGTTG+GGG 0.616630 8:-60526649 MsG0880045523.01.T01:CDS
TTCGTCAATCAAATAAGACC+GGG 0.622270 8:+60524717 None:intergenic
AATCAATTCTGGGCAACAGT+CGG 0.624095 8:+60523846 None:intergenic
GTCTATGGTGATGACGACCA+TGG 0.624182 8:-60526674 MsG0880045523.01.T01:CDS
GAGTTTACCAGAAATGGCTG+GGG 0.625640 8:-60524529 MsG0880045523.01.T01:CDS
TGATAATCAAAAGCTACTCA+CGG 0.625740 8:-60525859 MsG0880045523.01.T01:CDS
AGCAGTGCTTGTAGATCACA+AGG 0.625969 8:-60524230 MsG0880045523.01.T01:CDS
ATTTACAAATGGAGGTACTG+TGG 0.628195 8:+60527398 None:intergenic
CCGTTTGCCTTCTCTTCGAG+CGG 0.629704 8:+60523982 None:intergenic
CTGACTGTAGTGTAATGTAC+GGG 0.631502 8:-60523662 MsG0880045523.01.T01:three_prime_UTR
GAGAAAGGTCCCCAAAAGGG+TGG 0.640117 8:-60524631 MsG0880045523.01.T01:CDS
TAGCCACTATGGTTGGAGAG+AGG 0.640917 8:-60526705 MsG0880045523.01.T01:CDS
TAACCGATGCTACTACCACT+AGG 0.643730 8:+60525394 None:intergenic
CTACAATACTAAAATCACAC+CGG 0.651215 8:+60524557 None:intergenic
ATCATATAGAAGCACAAGTG+AGG 0.652248 8:-60523952 MsG0880045523.01.T01:CDS
TACAGAGAGAACAAAGATGG+TGG 0.653072 8:-60525445 MsG0880045523.01.T01:CDS
CGAGTGAGGAGATTACTGAC+AGG 0.653342 8:-60526565 MsG0880045523.01.T01:CDS
ATGGTGATGACGACCATGGG+AGG 0.657566 8:-60526670 MsG0880045523.01.T01:CDS
TCATCAATGTGATCGGAACA+GGG 0.661508 8:-60525971 MsG0880045523.01.T01:CDS
CAAAGTTAAATAAACCACGT+GGG 0.662719 8:-60526136 MsG0880045523.01.T01:CDS
GGGTCCAAAGGTGTTGAGTG+TGG 0.664072 8:-60526483 MsG0880045523.01.T01:CDS
CAAGAAGATTCAAAATACAG+AGG 0.670445 8:-60527249 MsG0880045523.01.T01:CDS
AAAGTTAAATAAACCACGTG+GGG 0.671536 8:-60526135 MsG0880045523.01.T01:CDS
TTATCAATGGAACGATTAGG+CGG 0.671751 8:+60525876 None:intergenic
TGGTAGAATGGTGAAAATTG+CGG 0.672758 8:-60527343 MsG0880045523.01.T01:CDS
GAATGCAGATTTGAGTGCAG+TGG 0.672939 8:+60523764 None:intergenic
GATCGGAACAGGGACTCGCA+GGG 0.681782 8:-60525961 MsG0880045523.01.T01:CDS
CCATAAGTACTTAAACCAAG+AGG 0.682245 8:+60526248 None:intergenic
CCAAAGTTAAATAAACCACG+TGG 0.686478 8:-60526137 MsG0880045523.01.T01:CDS
AAGAAAGTTGTTGCACTGTG+AGG 0.687830 8:+60524809 None:intergenic
AATAATCCGAGATTCTGCCA+GGG 0.690321 8:+60526529 None:intergenic
AAAGATCGTTCATTTCTCGG+TGG 0.698372 8:-60526304 MsG0880045523.01.T01:CDS
AGATGCAAGCTGTCCCCACG+TGG 0.698716 8:+60526122 None:intergenic
GAAAATTGCGGTAGAAGCTG+CGG 0.701357 8:-60527331 MsG0880045523.01.T01:CDS
CTACACACAAGTACTGCTTG+GGG 0.703925 8:-60526503 MsG0880045523.01.T01:CDS
GAAACAACCCAGAGACCACG+CGG 0.758342 8:-60525822 MsG0880045523.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATATATGAAAATGAA+TGG + Chr8:60524259-60524278 None:intergenic 10.0%
!! TATCAAATATAATATCTTAA+GGG + Chr8:60524156-60524175 None:intergenic 10.0%
!! AGTAAGAATAAAAATTAGAA+AGG + Chr8:60528713-60528732 None:intergenic 15.0%
!! ATCAAATATAATATCTTAAG+GGG + Chr8:60524155-60524174 None:intergenic 15.0%
!! GTAAGAATAAAAATTAGAAA+GGG + Chr8:60528712-60528731 None:intergenic 15.0%
!! GTATCAAATATAATATCTTA+AGG + Chr8:60524157-60524176 None:intergenic 15.0%
!! TGCTTATTATTATTATCAAA+AGG + Chr8:60524210-60524229 None:intergenic 15.0%
!!! ATTGCATTTTTAATAGTAAT+TGG + Chr8:60528780-60528799 None:intergenic 15.0%
!!! ATTTTTAATAGTAATTGGAT+TGG + Chr8:60528775-60528794 None:intergenic 15.0%
!! AAAAGTAAAACAAATGTAGT+AGG + Chr8:60528617-60528636 None:intergenic 20.0%
!! AATAAGGTTACTGTAAAAAT+AGG - Chr8:60524672-60524691 MsG0880045523.01.T01:CDS 20.0%
!! AATATTAGAAGAATCAATTC+TGG + Chr8:60528503-60528522 None:intergenic 20.0%
!! ATAAACTGAAAAATAGCTTA+TGG - Chr8:60525244-60525263 MsG0880045523.01.T01:CDS 20.0%
!! ATAAGGTTACTGTAAAAATA+GGG - Chr8:60524673-60524692 MsG0880045523.01.T01:CDS 20.0%
!! ATATATATGAAAATGAATGG+TGG + Chr8:60524256-60524275 None:intergenic 20.0%
!! ATATTAGAAGAATCAATTCT+GGG + Chr8:60528502-60528521 None:intergenic 20.0%
!! CAAATATAGACAGAAAAATA+AGG - Chr8:60524656-60524675 MsG0880045523.01.T01:CDS 20.0%
!! CGGTTTGAATAAAATATATT+AGG + Chr8:60528215-60528234 None:intergenic 20.0%
!! GTTAAACATATTAAATGAGT+CGG + Chr8:60523632-60523651 None:intergenic 20.0%
!!! CTTATTTTTCTGTCTATATT+TGG + Chr8:60524658-60524677 None:intergenic 20.0%
!!! GTTCATTTTAATCCTTTTTA+AGG - Chr8:60524785-60524804 MsG0880045523.01.T01:CDS 20.0%
!!! GTTTTATTTTATTTAAACCG+TGG + Chr8:60523665-60523684 None:intergenic 20.0%
!!! TTAACCATTCATATTTTTAC+AGG + Chr8:60524754-60524773 None:intergenic 20.0%
! AAAAGGGTAGATCTTAAAAA+AGG + Chr8:60524306-60524325 None:intergenic 25.0%
! AATAATGACAGAGAAATCTA+AGG + Chr8:60523726-60523745 None:intergenic 25.0%
! AATATAATATCTTAAGGGGT+TGG + Chr8:60524151-60524170 None:intergenic 25.0%
! AATGGAAAGCTGTTAAAAAT+CGG - Chr8:60526552-60526571 MsG0880045523.01.T01:CDS 25.0%
! AGAACTCCAATATTTACAAA+TGG + Chr8:60524951-60524970 None:intergenic 25.0%
! AGCATATGTTGAATATGATA+TGG + Chr8:60524121-60524140 None:intergenic 25.0%
! AGTAAAGAAACACCTTAAAA+AGG + Chr8:60524800-60524819 None:intergenic 25.0%
! GCATATGTTGAATATGATAT+GGG + Chr8:60524120-60524139 None:intergenic 25.0%
! TAATGTATAGTACATGTGTT+TGG - Chr8:60523606-60523625 MsG0880045523.01.T01:three_prime_UTR 25.0%
! TATCAAAAGGCTAATAATGA+GGG + Chr8:60524197-60524216 None:intergenic 25.0%
! TCATTAAGGTACATAGAAAT+GGG + Chr8:60528543-60528562 None:intergenic 25.0%
! TCTATGTACCTTAATGAATT+TGG - Chr8:60528546-60528565 MsG0880045523.01.T01:intron 25.0%
! TGAAAAACGAGAAAAACATA+TGG + Chr8:60523833-60523852 None:intergenic 25.0%
! TGATCATTTCAAACTTTAAC+TGG + Chr8:60524389-60524408 None:intergenic 25.0%
! TGGTCTTTACAATTTATGTT+GGG - Chr8:60527876-60527895 MsG0880045523.01.T01:intron 25.0%
! TTATCAAAAGGCTAATAATG+AGG + Chr8:60524198-60524217 None:intergenic 25.0%
! TTCATTAAGGTACATAGAAA+TGG + Chr8:60528544-60528563 None:intergenic 25.0%
! TTGTTTCAGAAATGTATCAA+GGG + Chr8:60526151-60526170 None:intergenic 25.0%
! TTTAAACAAACAGAAAAGCT+AGG + Chr8:60525151-60525170 None:intergenic 25.0%
!! AATTTTGTGGTAATCAAATC+TGG - Chr8:60527124-60527143 MsG0880045523.01.T01:intron 25.0%
!! CTTATCATATTGAACCTTTT+TGG - Chr8:60527158-60527177 MsG0880045523.01.T01:intron 25.0%
!! GAATGATTGGACTATATTTT+TGG + Chr8:60524337-60524356 None:intergenic 25.0%
!! GTTACGTAAAAGTATATATG+TGG - Chr8:60526269-60526288 MsG0880045523.01.T01:CDS 25.0%
!! TAAAATATATTAGGAGTGCA+AGG + Chr8:60528206-60528225 None:intergenic 25.0%
!! TATATTTTATTCAAACCGTG+AGG - Chr8:60528217-60528236 MsG0880045523.01.T01:intron 25.0%
!! TCTTATTTGATTGACGAAAT+CGG - Chr8:60527623-60527642 MsG0880045523.01.T01:intron 25.0%
!! TTATTTGTGTTTTACTTTGC+AGG - Chr8:60527277-60527296 MsG0880045523.01.T01:CDS 25.0%
!! TTGGTCTTTACAATTTATGT+TGG - Chr8:60527875-60527894 MsG0880045523.01.T01:intron 25.0%
!!! AACTTGTGCTATTTTTTCTT+TGG + Chr8:60523886-60523905 None:intergenic 25.0%
!!! ATATTGAACCTTTTTGGAAT+TGG - Chr8:60527164-60527183 MsG0880045523.01.T01:intron 25.0%
!!! CTAGGTTATTTTGATTTGAT+TGG - Chr8:60524051-60524070 MsG0880045523.01.T01:CDS 25.0%
!!! TCTTTTTTCCATACAATGTA+GGG - Chr8:60527405-60527424 MsG0880045523.01.T01:CDS 25.0%
AAAAGCTAGGAGTAATATGA+TGG + Chr8:60525138-60525157 None:intergenic 30.0%
AAAGAAGTTCTCACAAAGAA+CGG + Chr8:60525572-60525591 None:intergenic 30.0%
AAAGTTAAATAAACCACGTG+GGG - Chr8:60526200-60526219 MsG0880045523.01.T01:CDS 30.0%
ACCATATGGAACAAACTTAT+AGG + Chr8:60526697-60526716 None:intergenic 30.0%
ACTCCAATATTTACAAATGG+AGG + Chr8:60524948-60524967 None:intergenic 30.0%
ACTTATAGTCCATATATCAG+TGG - Chr8:60527358-60527377 MsG0880045523.01.T01:CDS 30.0%
ATATATGTGGTTAACATGAC+TGG - Chr8:60526282-60526301 MsG0880045523.01.T01:CDS 30.0%
CAAACTCACGTGAAAATTAT+TGG + Chr8:60526786-60526805 None:intergenic 30.0%
CAAAGTTAAATAAACCACGT+GGG - Chr8:60526199-60526218 MsG0880045523.01.T01:CDS 30.0%
CAAGAAGATTCAAAATACAG+AGG - Chr8:60525086-60525105 MsG0880045523.01.T01:intron 30.0%
CAAGTTCACATCATATGTAT+TGG - Chr8:60523900-60523919 MsG0880045523.01.T01:CDS 30.0%
CAGAAATGAAGTTGAATGAT+TGG + Chr8:60524350-60524369 None:intergenic 30.0%
CATATGGAACAAACTTATAG+GGG + Chr8:60526695-60526714 None:intergenic 30.0%
CCATATGGAACAAACTTATA+GGG + Chr8:60526696-60526715 None:intergenic 30.0%
CTACAATACTAAAATCACAC+CGG + Chr8:60527781-60527800 None:intergenic 30.0%
CTTGTTTCAGAAATGTATCA+AGG + Chr8:60526152-60526171 None:intergenic 30.0%
CTTTACTTATTTGTTCAGCA+GGG - Chr8:60524813-60524832 MsG0880045523.01.T01:CDS 30.0%
GATCGTTCGAAAATGTAATT+TGG + Chr8:60526179-60526198 None:intergenic 30.0%
GATGAAATGGATAACATTCA+AGG - Chr8:60525967-60525986 MsG0880045523.01.T01:CDS 30.0%
GCATCCTGTAAAAATATGAA+TGG - Chr8:60524747-60524766 MsG0880045523.01.T01:CDS 30.0%
GTACCTCCATTTGTAAATAT+TGG - Chr8:60524942-60524961 MsG0880045523.01.T01:CDS 30.0%
TACAATTTATGTTGGGATCA+GGG - Chr8:60527883-60527902 MsG0880045523.01.T01:intron 30.0%
TACTCTTTCAATACTAGTGT+TGG - Chr8:60524972-60524991 MsG0880045523.01.T01:intron 30.0%
TATGAGATCATCAATGTGAT+CGG - Chr8:60526357-60526376 MsG0880045523.01.T01:CDS 30.0%
TCAAAAGATCGTTCATTTCT+CGG - Chr8:60526028-60526047 MsG0880045523.01.T01:CDS 30.0%
TCAAAATAACCTAGTACTAG+AGG + Chr8:60524045-60524064 None:intergenic 30.0%
TCTTTACTTATTTGTTCAGC+AGG - Chr8:60524812-60524831 MsG0880045523.01.T01:CDS 30.0%
TGACCGTGAAAAATCTTTAT+TGG + Chr8:60528427-60528446 None:intergenic 30.0%
TGATAATCAAAAGCTACTCA+CGG - Chr8:60526476-60526495 MsG0880045523.01.T01:CDS 30.0%
TGATTATCAATGGAACGATT+AGG + Chr8:60526465-60526484 None:intergenic 30.0%
TTACAATTTATGTTGGGATC+AGG - Chr8:60527882-60527901 MsG0880045523.01.T01:intron 30.0%
TTAGTATTACCAAGAATAGC+AGG + Chr8:60525050-60525069 None:intergenic 30.0%
TTCAAACTTTAACTGGAAGA+AGG + Chr8:60524382-60524401 None:intergenic 30.0%
TTCACATCATATGTATTGGA+GGG - Chr8:60523904-60523923 MsG0880045523.01.T01:CDS 30.0%
TTTAACAGCTTTCCATTGTT+TGG + Chr8:60526549-60526568 None:intergenic 30.0%
TTTCGTCAATCAAATAAGAC+CGG + Chr8:60527622-60527641 None:intergenic 30.0%
! AACAAGTAGCAACAATTTTG+TGG - Chr8:60527111-60527130 MsG0880045523.01.T01:intron 30.0%
! AGAAATCTAAGGTTCATGTA+TGG + Chr8:60523715-60523734 None:intergenic 30.0%
! AGACTGAATGATGATTTTAG+AGG - Chr8:60527077-60527096 MsG0880045523.01.T01:intron 30.0%
! AGCTATATTTTTCCTACTAG+TGG - Chr8:60527028-60527047 MsG0880045523.01.T01:intron 30.0%
! CAATAATTTTCACGTGAGTT+TGG - Chr8:60526784-60526803 MsG0880045523.01.T01:intron 30.0%
! CCACCAATAAAGATTTTTCA+CGG - Chr8:60528421-60528440 MsG0880045523.01.T01:intron 30.0%
! GCTATATTTTTCCTACTAGT+GGG - Chr8:60527029-60527048 MsG0880045523.01.T01:intron 30.0%
! GCTGTGAAAATTTTCAATGA+AGG - Chr8:60526240-60526259 MsG0880045523.01.T01:CDS 30.0%
!! ATTGTTGCTACTTGTTGTTT+AGG + Chr8:60527107-60527126 None:intergenic 30.0%
!! ATTTTTGGACAGTAGGAAAA+GGG + Chr8:60524322-60524341 None:intergenic 30.0%
!! CTTGATACATTTCTGAAACA+AGG - Chr8:60526150-60526169 MsG0880045523.01.T01:CDS 30.0%
!! GAGTAGCTTTTGATTATCAA+TGG + Chr8:60526475-60526494 None:intergenic 30.0%
!! GAGTGGATAAAGTATTTTGA+TGG + Chr8:60523773-60523792 None:intergenic 30.0%
!! TGCATTTTCTTTAGGAAAAC+AGG + Chr8:60527930-60527949 None:intergenic 30.0%
!! TTTGAATAAAGTGTTTCTGG+AGG + Chr8:60526438-60526457 None:intergenic 30.0%
!! TTTTCTTTAGGAAAACAGGA+AGG + Chr8:60527926-60527945 None:intergenic 30.0%
!!! AAGCTATTTTTGAGAGCTTA+TGG - Chr8:60525219-60525238 MsG0880045523.01.T01:intron 30.0%
!!! CTCTTTTTTCCATACAATGT+AGG - Chr8:60527404-60527423 MsG0880045523.01.T01:CDS 30.0%
!!! CTTTTTTCCATACAATGTAG+GGG - Chr8:60527406-60527425 MsG0880045523.01.T01:CDS 30.0%
!!! GGTTTTGAATAAAGTGTTTC+TGG + Chr8:60526441-60526460 None:intergenic 30.0%
!!! TATTTTTGGACAGTAGGAAA+AGG + Chr8:60524323-60524342 None:intergenic 30.0%
!!! TGCTGCAATTCAATTTTTTC+AGG - Chr8:60527981-60528000 MsG0880045523.01.T01:intron 30.0%
!!! TTGTGCTATTTTTTCTTTGG+TGG + Chr8:60523883-60523902 None:intergenic 30.0%
AAACTTTAACTGGAAGAAGG+AGG + Chr8:60524379-60524398 None:intergenic 35.0%
AACACCTGAAGAAACTATGA+AGG - Chr8:60527676-60527695 MsG0880045523.01.T01:intron 35.0%
AAGAAGTTCTCACAAAGAAC+GGG + Chr8:60525571-60525590 None:intergenic 35.0%
AAGTTGCTACCACTGATATA+TGG + Chr8:60527370-60527389 None:intergenic 35.0%
AATCAAATAAGACCGGGAAA+AGG + Chr8:60527615-60527634 None:intergenic 35.0%
AATTCTGATCCTGCTATTCT+TGG - Chr8:60525038-60525057 MsG0880045523.01.T01:CDS 35.0%
AATTGAAGCGAAGAAAGAGT+AGG + Chr8:60525548-60525567 None:intergenic 35.0%
ACATTCTGTCTTTACCATAC+AGG - Chr8:60526833-60526852 MsG0880045523.01.T01:intron 35.0%
ACGTACTAAAGAGAATTGGA+AGG - Chr8:60523998-60524017 MsG0880045523.01.T01:CDS 35.0%
AGGAAAACAGGAAGGTAAAA+GGG + Chr8:60527918-60527937 None:intergenic 35.0%
AGTATCACAGAAGACAGAAA+CGG + Chr8:60527341-60527360 None:intergenic 35.0%
AGTCTTTCCACTAGTCAAAT+TGG + Chr8:60526058-60526077 None:intergenic 35.0%
ATAGCTTATGGACATGTCAT+AGG - Chr8:60525256-60525275 MsG0880045523.01.T01:CDS 35.0%
ATCATAACACATCAGACTTG+AGG + Chr8:60525368-60525387 None:intergenic 35.0%
ATCATACTCAAAACCAACCA+GGG + Chr8:60524595-60524614 None:intergenic 35.0%
ATGCATCAGTAACATAGCTT+GGG + Chr8:60527192-60527211 None:intergenic 35.0%
CAAGACGTACTAAAGAGAAT+TGG - Chr8:60523994-60524013 MsG0880045523.01.T01:CDS 35.0%
CAAGCACTCAAAAGACAATT+AGG + Chr8:60527858-60527877 None:intergenic 35.0%
CACAAACCAAACTCTAATCA+TGG + Chr8:60524859-60524878 None:intergenic 35.0%
CAGAAAGTGGAGATTTACAA+AGG - Chr8:60528061-60528080 MsG0880045523.01.T01:intron 35.0%
CAGTGGATCCAAATTCATTA+AGG + Chr8:60528557-60528576 None:intergenic 35.0%
CCAAAGTTAAATAAACCACG+TGG - Chr8:60526198-60526217 MsG0880045523.01.T01:CDS 35.0%
CCATAAGTACTTAAACCAAG+AGG + Chr8:60526090-60526109 None:intergenic 35.0%
CCGTGAAAAATCTTTATTGG+TGG + Chr8:60528424-60528443 None:intergenic 35.0%
CCTCTTGGTTTAAGTACTTA+TGG - Chr8:60526087-60526106 MsG0880045523.01.T01:CDS 35.0%
CTACAAATAGCCATATAAGC+AGG + Chr8:60527463-60527482 None:intergenic 35.0%
CTAGTACTAGAGGTTTCTTT+CGG + Chr8:60524035-60524054 None:intergenic 35.0%
GACCAATATTTAGCAGCAAA+TGG + Chr8:60524426-60524445 None:intergenic 35.0%
GCTTGAACCAAAACATAGAT+TGG - Chr8:60524078-60524097 MsG0880045523.01.T01:CDS 35.0%
GTAAATAGCAAAGATCCTGT+TGG - Chr8:60527575-60527594 MsG0880045523.01.T01:intron 35.0%
GTACCTGAGAAACAAATTCA+CGG + Chr8:60526599-60526618 None:intergenic 35.0%
GTCTCAGCTAATCAAACTTT+AGG - Chr8:60524443-60524462 MsG0880045523.01.T01:intron 35.0%
GTTCACATCATATGTATTGG+AGG - Chr8:60523903-60523922 MsG0880045523.01.T01:CDS 35.0%
GTTTAACTACACATGAACCA+CGG - Chr8:60523645-60523664 MsG0880045523.01.T01:three_prime_UTR 35.0%
TAAATGATAGCAAAGGAACC+TGG + Chr8:60525514-60525533 None:intergenic 35.0%
TACAAAGGATCCATGACAAA+TGG - Chr8:60528076-60528095 MsG0880045523.01.T01:intron 35.0%
TACTACAGAGAGAACAAAGA+TGG - Chr8:60526887-60526906 MsG0880045523.01.T01:intron 35.0%
TAGGAAAACAGGAAGGTAAA+AGG + Chr8:60527919-60527938 None:intergenic 35.0%
TATCATACTCAAAACCAACC+AGG + Chr8:60524596-60524615 None:intergenic 35.0%
TCTCTTGGAATGTTGCAAAA+TGG - Chr8:60525880-60525899 MsG0880045523.01.T01:CDS 35.0%
TCTGACTGTAGTGTAATGTA+CGG - Chr8:60528672-60528691 MsG0880045523.01.T01:intron 35.0%
TCTTCTGACAGTCTTAATCA+TGG + Chr8:60523687-60523706 None:intergenic 35.0%
TGGTAGAATGGTGAAAATTG+CGG - Chr8:60524992-60525011 MsG0880045523.01.T01:intron 35.0%
TGTTGCAAAATGGTTATGTC+TGG - Chr8:60525890-60525909 MsG0880045523.01.T01:CDS 35.0%
TTATCAATGGAACGATTAGG+CGG + Chr8:60526462-60526481 None:intergenic 35.0%
TTCGTCAATCAAATAAGACC+GGG + Chr8:60527621-60527640 None:intergenic 35.0%
TTGATACCAAACCAAACCAA+GGG - Chr8:60524170-60524189 MsG0880045523.01.T01:CDS 35.0%
TTGCAACCATGATTAGAGTT+TGG - Chr8:60524850-60524869 MsG0880045523.01.T01:CDS 35.0%
TTTGATACCAAACCAAACCA+AGG - Chr8:60524169-60524188 MsG0880045523.01.T01:CDS 35.0%
TTTGATGTTCTCTTCAACTG+TGG - Chr8:60524899-60524918 MsG0880045523.01.T01:CDS 35.0%
! AAGTTTGTTCCATATGGTGA+TGG - Chr8:60526699-60526718 MsG0880045523.01.T01:CDS 35.0%
! ACATTGATGATCTCATATGC+TGG + Chr8:60526354-60526373 None:intergenic 35.0%
! ACTCAATCTCAAGAGCTTTT+GGG - Chr8:60528149-60528168 MsG0880045523.01.T01:intron 35.0%
! AGTGCATGTGCATTTTCTTT+AGG + Chr8:60527938-60527957 None:intergenic 35.0%
! ATCATATAGAAGCACAAGTG+AGG - Chr8:60528383-60528402 MsG0880045523.01.T01:intron 35.0%
! ATCTAAGGTTCATGTATGGT+TGG + Chr8:60523711-60523730 None:intergenic 35.0%
! CACCATTTGCTGCTAAATAT+TGG - Chr8:60524421-60524440 MsG0880045523.01.T01:intron 35.0%
! CCACGTGGTTTATTTAACTT+TGG + Chr8:60526201-60526220 None:intergenic 35.0%
! CCCTATAAGTTTGTTCCATA+TGG - Chr8:60526693-60526712 MsG0880045523.01.T01:CDS 35.0%
! GATCTTTTGAGCTTAGAATC+TGG + Chr8:60526018-60526037 None:intergenic 35.0%
! GGTTATTGGTCTAATTACTC+TGG - Chr8:60526399-60526418 MsG0880045523.01.T01:CDS 35.0%
! GTATTTTCCCCTACATTGTA+TGG + Chr8:60527416-60527435 None:intergenic 35.0%
! GTTTCTTCAGGTGTTTTCAT+AGG + Chr8:60527671-60527690 None:intergenic 35.0%
! GTTTTTCACACAACACAAGT+GGG - Chr8:60523845-60523864 MsG0880045523.01.T01:three_prime_UTR 35.0%
! TAAAAATCGGAGTACCTAGA+AGG - Chr8:60526565-60526584 MsG0880045523.01.T01:CDS 35.0%
! TCTTTACCTAGTTTGTGGTT+TGG - Chr8:60528173-60528192 MsG0880045523.01.T01:intron 35.0%
! TTACCGTGAATTTGTTTCTC+AGG - Chr8:60526593-60526612 MsG0880045523.01.T01:CDS 35.0%
! TTACTGCTTTATTCTTTCCC+TGG - Chr8:60524575-60524594 MsG0880045523.01.T01:CDS 35.0%
!! ATATGATATGGGTGCTGTTT+AGG + Chr8:60524109-60524128 None:intergenic 35.0%
!! ATTTACAAATGGAGGTACTG+TGG + Chr8:60524940-60524959 None:intergenic 35.0%
!! CAATACTAGTGTTGGTAGAA+TGG - Chr8:60524980-60524999 MsG0880045523.01.T01:intron 35.0%
!! CATGATTAGAGTTTGGTTTG+TGG - Chr8:60524857-60524876 MsG0880045523.01.T01:CDS 35.0%
!! CGGTGTGATTTTAGTATTGT+AGG - Chr8:60527779-60527798 MsG0880045523.01.T01:intron 35.0%
!! CTAATTGTCTTTTGAGTGCT+TGG - Chr8:60527856-60527875 MsG0880045523.01.T01:intron 35.0%
!! GAAAATACTAAGAGCACTCT+TGG - Chr8:60527428-60527447 MsG0880045523.01.T01:CDS 35.0%
!!! ATCTATGTTTTGGTTCAAGC+AGG + Chr8:60524078-60524097 None:intergenic 35.0%
!!! GGACTATATTTTTGGACAGT+AGG + Chr8:60524329-60524348 None:intergenic 35.0%
!!! TTGTTTTGACCATCACCATA+TGG + Chr8:60526711-60526730 None:intergenic 35.0%
AAAGATCGTTCATTTCTCGG+TGG - Chr8:60526031-60526050 MsG0880045523.01.T01:CDS 40.0%
AACATGCCAAACCACAAACT+AGG + Chr8:60528182-60528201 None:intergenic 40.0%
AACTTATAGGGGACAGCATA+AGG + Chr8:60526684-60526703 None:intergenic 40.0%
AAGAAAGTTGTTGCACTGTG+AGG + Chr8:60527529-60527548 None:intergenic 40.0%
AAGAGTTTACCAGAAATGGC+TGG - Chr8:60527804-60527823 MsG0880045523.01.T01:intron 40.0%
AATAATCCGAGATTCTGCCA+GGG + Chr8:60525809-60525828 None:intergenic 40.0%
AATCAATTCTGGGCAACAGT+CGG + Chr8:60528492-60528511 None:intergenic 40.0%
ACAGTCGGTCAGACTATATT+AGG + Chr8:60528477-60528496 None:intergenic 40.0%
ACATAGAAATGGGCAACAGT+TGG + Chr8:60528533-60528552 None:intergenic 40.0%
ACATTGTTAGCCACTATGGT+TGG - Chr8:60525623-60525642 MsG0880045523.01.T01:CDS 40.0%
ACTAGGCCAGACTCAATATA+GGG + Chr8:60526927-60526946 None:intergenic 40.0%
ACTAGTGGAAAGACTGCAAA+TGG - Chr8:60526063-60526082 MsG0880045523.01.T01:CDS 40.0%
ACTTTCTGCCAACTCCAAAA+TGG + Chr8:60528049-60528068 None:intergenic 40.0%
AGAGTTTACCAGAAATGGCT+GGG - Chr8:60527805-60527824 MsG0880045523.01.T01:intron 40.0%
AGGAATGGAATTAGTGCGTT+GGG - Chr8:60525685-60525704 MsG0880045523.01.T01:CDS 40.0%
AGTCTGTTTGAGAGAGCTTA+CGG + Chr8:60525288-60525307 None:intergenic 40.0%
AGTGCCTTCATAGTTTCTTC+AGG + Chr8:60527683-60527702 None:intergenic 40.0%
ATCATCAATGTGATCGGAAC+AGG - Chr8:60526363-60526382 MsG0880045523.01.T01:CDS 40.0%
ATGGAGAAGTTGCATGAAGT+TGG + Chr8:60523814-60523833 None:intergenic 40.0%
CACCATTTACACCAATGATG+TGG - Chr8:60526997-60527016 MsG0880045523.01.T01:intron 40.0%
CATGCATCAGTAACATAGCT+TGG + Chr8:60527193-60527212 None:intergenic 40.0%
CGAAAGAAACCTCTAGTACT+AGG - Chr8:60524033-60524052 MsG0880045523.01.T01:CDS 40.0%
CTGACTGTAGTGTAATGTAC+GGG - Chr8:60528673-60528692 MsG0880045523.01.T01:intron 40.0%
CTTGGGTTCCAATTCCAAAA+AGG + Chr8:60527175-60527194 None:intergenic 40.0%
GCACAAGCTCAGTATTACTT+GGG + Chr8:60526734-60526753 None:intergenic 40.0%
GGTCAAGAGTTTACCAGAAA+TGG - Chr8:60527800-60527819 MsG0880045523.01.T01:intron 40.0%
GTCAATTGCTGAACTTTGAG+TGG + Chr8:60523790-60523809 None:intergenic 40.0%
GTCCACATCATTGGTGTAAA+TGG + Chr8:60527002-60527021 None:intergenic 40.0%
GTGGCTGTAAATGATAGCAA+AGG + Chr8:60525521-60525540 None:intergenic 40.0%
TACAGAGAGAACAAAGATGG+TGG - Chr8:60526890-60526909 MsG0880045523.01.T01:intron 40.0%
TAGTACGTCTTGTGTTAGAG+AGG + Chr8:60523986-60524005 None:intergenic 40.0%
TATTGGAACGATACTCACAC+CGG + Chr8:60526769-60526788 None:intergenic 40.0%
TCAGAAATGTATCAAGGGCA+CGG + Chr8:60526146-60526165 None:intergenic 40.0%
TCATATAGCAAATGAGCTCC+AGG - Chr8:60525493-60525512 MsG0880045523.01.T01:intron 40.0%
TCATCAATGTGATCGGAACA+GGG - Chr8:60526364-60526383 MsG0880045523.01.T01:CDS 40.0%
TCCATTTCATCTGAAGAGAG+AGG + Chr8:60525958-60525977 None:intergenic 40.0%
TCCTCTCTCTTCAGATGAAA+TGG - Chr8:60525954-60525973 MsG0880045523.01.T01:CDS 40.0%
TCTCATATGCTGGATTTGCA+AGG + Chr8:60526344-60526363 None:intergenic 40.0%
TTGAATCTTCTTGCAGTGAG+AGG + Chr8:60525079-60525098 None:intergenic 40.0%
! AAAAGCTACTCACGGTCTTT+TGG - Chr8:60526484-60526503 MsG0880045523.01.T01:CDS 40.0%
! AGAAGACGGATTCAAATGCT+TGG - Chr8:60526964-60526983 MsG0880045523.01.T01:intron 40.0%
! CGTTTTTCACACAACACAAG+TGG - Chr8:60523844-60523863 MsG0880045523.01.T01:three_prime_UTR 40.0%
! CTCAATCTCAAGAGCTTTTG+GGG - Chr8:60528150-60528169 MsG0880045523.01.T01:intron 40.0%
! GAAGACGGATTCAAATGCTT+GGG - Chr8:60526965-60526984 MsG0880045523.01.T01:intron 40.0%
! GACTCAATCTCAAGAGCTTT+TGG - Chr8:60528148-60528167 MsG0880045523.01.T01:intron 40.0%
! GGTTGGACCAATCTATGTTT+TGG + Chr8:60524088-60524107 None:intergenic 40.0%
! GGTTGGGTTTTTCCAAACAA+TGG - Chr8:60526534-60526553 MsG0880045523.01.T01:CDS 40.0%
! TATAGAAGCACAAGTGAGGT+TGG - Chr8:60528387-60528406 MsG0880045523.01.T01:intron 40.0%
! TCTACACACAAGTACTGCTT+GGG - Chr8:60525831-60525850 MsG0880045523.01.T01:CDS 40.0%
! TGAAGAAACTATGAAGGCAC+TGG - Chr8:60527682-60527701 MsG0880045523.01.T01:intron 40.0%
! TGCTTTATTCTTTCCCTGGT+TGG - Chr8:60524579-60524598 MsG0880045523.01.T01:CDS 40.0%
! TTCTACACACAAGTACTGCT+TGG - Chr8:60525830-60525849 MsG0880045523.01.T01:CDS 40.0%
!! AGTAGCATCGGTTAAGAAGA+CGG - Chr8:60526950-60526969 MsG0880045523.01.T01:intron 40.0%
!! AGTTTGGTTTGTGGTGTTGA+TGG - Chr8:60524866-60524885 MsG0880045523.01.T01:CDS 40.0%
!! GTCGTTTTGTCCTGCTTATA+TGG - Chr8:60527450-60527469 MsG0880045523.01.T01:CDS 40.0%
!! GTTGCTACTTGTTGTTTAGG+AGG + Chr8:60527104-60527123 None:intergenic 40.0%
!! TAAAATCACACCGGCTTGAA+AGG + Chr8:60527772-60527791 None:intergenic 40.0%
!!! ATTTTGGAGTTGGCAGAAAG+TGG - Chr8:60528048-60528067 MsG0880045523.01.T01:intron 40.0%
AAACAACAGCTCCCACTAGT+AGG + Chr8:60527043-60527062 None:intergenic 45.0%
AAGACTGCAAATGGTCCTCT+TGG - Chr8:60526072-60526091 MsG0880045523.01.T01:CDS 45.0%
ACAATCCACTGACACGTTCA+AGG - Chr8:60526617-60526636 MsG0880045523.01.T01:CDS 45.0%
ACACAGACTGTGGCGATTAT+CGG - Chr8:60525437-60525456 MsG0880045523.01.T01:CDS 45.0%
ACTCAGCCCTATATTGAGTC+TGG - Chr8:60526918-60526937 MsG0880045523.01.T01:intron 45.0%
ACTCCAAAATGGCAGTTGAC+AGG + Chr8:60528038-60528057 None:intergenic 45.0%
AGAGAGGTTATCGCAGTCTA+TGG - Chr8:60525646-60525665 MsG0880045523.01.T01:CDS 45.0%
AGCAGTGCTTGTAGATCACA+AGG - Chr8:60528105-60528124 MsG0880045523.01.T01:intron 45.0%
ATAATGAGGGACCCTTGGTT+TGG + Chr8:60524184-60524203 None:intergenic 45.0%
ATGTTCTCTTCAACTGTGGC+TGG - Chr8:60524903-60524922 MsG0880045523.01.T01:CDS 45.0%
CAATAATCCGAGATTCTGCC+AGG + Chr8:60525810-60525829 None:intergenic 45.0%
CAATCCACTGACACGTTCAA+GGG - Chr8:60526618-60526637 MsG0880045523.01.T01:CDS 45.0%
CACTAATTCCATTCCTCCCA+TGG + Chr8:60525681-60525700 None:intergenic 45.0%
CACTAGGCCAGACTCAATAT+AGG + Chr8:60526928-60526947 None:intergenic 45.0%
CATTCACTATTGCAGCTGCT+GGG - Chr8:60528589-60528608 MsG0880045523.01.T01:intron 45.0%
CCATCAGGTGTATACCTGAA+TGG + Chr8:60526318-60526337 None:intergenic 45.0%
CCATTCAGGTATACACCTGA+TGG - Chr8:60526315-60526334 MsG0880045523.01.T01:CDS 45.0%
CGAAGAAAGAGTAGGATCAG+TGG + Chr8:60525540-60525559 None:intergenic 45.0%
CGCACAAGCTCAGTATTACT+TGG + Chr8:60526735-60526754 None:intergenic 45.0%
CTATATTGAGTCTGGCCTAG+TGG - Chr8:60526926-60526945 MsG0880045523.01.T01:intron 45.0%
GAAAATTGCGGTAGAAGCTG+CGG - Chr8:60525004-60525023 MsG0880045523.01.T01:intron 45.0%
GAACTAGAGTCTTCTGTCCA+AGG - Chr8:60528264-60528283 MsG0880045523.01.T01:intron 45.0%
GAATGCAGATTTGAGTGCAG+TGG + Chr8:60528574-60528593 None:intergenic 45.0%
GAATGGAATTAGTGCGTTGG+GGG - Chr8:60525687-60525706 MsG0880045523.01.T01:CDS 45.0%
GAGGAATGGAATTAGTGCGT+TGG - Chr8:60525684-60525703 MsG0880045523.01.T01:CDS 45.0%
GAGTTTACCAGAAATGGCTG+GGG - Chr8:60527806-60527825 MsG0880045523.01.T01:intron 45.0%
GCAGACATTGTTAGCCACTA+TGG - Chr8:60525619-60525638 MsG0880045523.01.T01:CDS 45.0%
GCTGTTACAGTCCACATCAT+TGG + Chr8:60527011-60527030 None:intergenic 45.0%
GGAATGGAATTAGTGCGTTG+GGG - Chr8:60525686-60525705 MsG0880045523.01.T01:CDS 45.0%
GGATTTGCAAGGTTTCCATC+AGG + Chr8:60526333-60526352 None:intergenic 45.0%
GTTAACATGACTGGCGTAAC+AGG - Chr8:60526291-60526310 MsG0880045523.01.T01:CDS 45.0%
GTTGACAGGTCAACTGCTAA+TGG + Chr8:60528024-60528043 None:intergenic 45.0%
TAACCGATGCTACTACCACT+AGG + Chr8:60526944-60526963 None:intergenic 45.0%
TAACCTCTCTCCAACCATAG+TGG + Chr8:60525636-60525655 None:intergenic 45.0%
TAATGGTGAGTCTGGTGGAA+AGG + Chr8:60528007-60528026 None:intergenic 45.0%
TACAAATCCCCAGCCATTTC+TGG + Chr8:60527816-60527835 None:intergenic 45.0%
TACTAGTGGGAGCTGTTGTT+TGG - Chr8:60527042-60527061 MsG0880045523.01.T01:intron 45.0%
TAGAGCTCTTCCTTTCAAGC+CGG - Chr8:60527759-60527778 MsG0880045523.01.T01:intron 45.0%
TCAACTGCTAATGGTGAGTC+TGG + Chr8:60528015-60528034 None:intergenic 45.0%
TCACGGTAACTAGACCTTCT+AGG + Chr8:60526582-60526601 None:intergenic 45.0%
TGCAGCATCAAAGACCTGTA+TGG + Chr8:60526850-60526869 None:intergenic 45.0%
TGCTCAAGAGCCATTTGTCA+TGG + Chr8:60528089-60528108 None:intergenic 45.0%
TGGGGTCTTTACCTAGTTTG+TGG - Chr8:60528168-60528187 MsG0880045523.01.T01:intron 45.0%
! ACAGAAGACTCTAGTTCGTC+TGG + Chr8:60528261-60528280 None:intergenic 45.0%
! AGATCCTGTTGGTTACTTGC+AGG - Chr8:60527586-60527605 MsG0880045523.01.T01:intron 45.0%
! CAGAAATGTATCAAGGGCAC+GGG + Chr8:60526145-60526164 None:intergenic 45.0%
! CTACACACAAGTACTGCTTG+GGG - Chr8:60525832-60525851 MsG0880045523.01.T01:CDS 45.0%
! GATCCTGTTGGTTACTTGCA+GGG - Chr8:60527587-60527606 MsG0880045523.01.T01:intron 45.0%
! GATTACTGACAGGCTAGTTC+AGG - Chr8:60525780-60525799 MsG0880045523.01.T01:CDS 45.0%
! TCTATGGTGATGACGACCAT+GGG - Chr8:60525662-60525681 MsG0880045523.01.T01:CDS 45.0%
!! ACTATGAAGGCACTGGAGAA+AGG - Chr8:60527689-60527708 MsG0880045523.01.T01:intron 45.0%
!! AGGCTTTTTGAGCATTGCTG+AGG - Chr8:60525106-60525125 MsG0880045523.01.T01:intron 45.0%
!! GATATGGGTGCTGTTTAGGT+TGG + Chr8:60524105-60524124 None:intergenic 45.0%
!! GGCTTTTTGAGCATTGCTGA+GGG - Chr8:60525107-60525126 MsG0880045523.01.T01:intron 45.0%
!! TGACCTGTCAACTGCCATTT+TGG - Chr8:60528032-60528051 MsG0880045523.01.T01:intron 45.0%
!!! GTCAACTGCCATTTTGGAGT+TGG - Chr8:60528038-60528057 MsG0880045523.01.T01:intron 45.0%
!!! ATAATTTTTTTTTTTTGAAA+CGG - Chr8:60524523-60524542 MsG0880045523.01.T01:intron 5.0%
ACTGCTAATGGTGAGTCTGG+TGG + Chr8:60528012-60528031 None:intergenic 50.0%
ACTGGAGAAAGGTCCCCAAA+AGG - Chr8:60527700-60527719 MsG0880045523.01.T01:intron 50.0%
ATCTCCTCACTCGTTGCATC+AGG + Chr8:60525763-60525782 None:intergenic 50.0%
CAGGTCTTTGATGCTGCAGT+AGG - Chr8:60526852-60526871 MsG0880045523.01.T01:intron 50.0%
CGAAGAGAAGGCAAACGGAA+AGG - Chr8:60528358-60528377 MsG0880045523.01.T01:intron 50.0%
CGAGTGAGGAGATTACTGAC+AGG - Chr8:60525770-60525789 MsG0880045523.01.T01:CDS 50.0%
CGGTGGACCAATTTGACTAG+TGG - Chr8:60526048-60526067 MsG0880045523.01.T01:CDS 50.0%
CTGGAGAAAGGTCCCCAAAA+GGG - Chr8:60527701-60527720 MsG0880045523.01.T01:intron 50.0%
GAACCCTGCAAGTAACCAAC+AGG + Chr8:60527593-60527612 None:intergenic 50.0%
GAATCCCTTGAACGTGTCAG+TGG + Chr8:60526625-60526644 None:intergenic 50.0%
GAGTCTTCTGTCCAAGGTTC+AGG - Chr8:60528270-60528289 MsG0880045523.01.T01:intron 50.0%
GCACTGTGAGGATTGAAGTC+AGG + Chr8:60527517-60527536 None:intergenic 50.0%
GCATTCACTATTGCAGCTGC+TGG - Chr8:60528588-60528607 MsG0880045523.01.T01:intron 50.0%
GGCTAATAATGAGGGACCCT+TGG + Chr8:60524189-60524208 None:intergenic 50.0%
GTAAACAGCGTTGCAGCTCA+TGG - Chr8:60525412-60525431 MsG0880045523.01.T01:CDS 50.0%
GTGCTTCTTGTACTGCCTCA+CGG + Chr8:60528235-60528254 None:intergenic 50.0%
TAGCCACTATGGTTGGAGAG+AGG - Chr8:60525630-60525649 MsG0880045523.01.T01:CDS 50.0%
TGAGCTGTTGTAGACGTCTG+AGG + Chr8:60525464-60525483 None:intergenic 50.0%
TGGCCTAGTGGTAGTAGCAT+CGG - Chr8:60526938-60526957 MsG0880045523.01.T01:intron 50.0%
TTCGCCACACTCAACACCTT+TGG + Chr8:60525859-60525878 None:intergenic 50.0%
TTGAGTGTGGCGAAGTCTCT+TGG - Chr8:60525865-60525884 MsG0880045523.01.T01:CDS 50.0%
TTTGGAAAAACCCAACCGCG+TGG + Chr8:60526531-60526550 None:intergenic 50.0%
! AAGTACTGCTTGGGGTCCAA+AGG - Chr8:60525840-60525859 MsG0880045523.01.T01:CDS 50.0%
! ACTTGCAGGGTTCCTTTTCC+CGG - Chr8:60527600-60527619 MsG0880045523.01.T01:intron 50.0%
! ATGCAGCAATGCCACCCTTT+TGG + Chr8:60527718-60527737 None:intergenic 50.0%
! GTCTATGGTGATGACGACCA+TGG - Chr8:60525661-60525680 MsG0880045523.01.T01:CDS 50.0%
! TGCAGCAATGCCACCCTTTT+GGG + Chr8:60527717-60527736 None:intergenic 50.0%
AGGTTGCCCTGGCAGAATCT+CGG - Chr8:60525800-60525819 MsG0880045523.01.T01:CDS 55.0%
CCGCTCGAAGAGAAGGCAAA+CGG - Chr8:60528353-60528372 MsG0880045523.01.T01:intron 55.0%
CCGTTTGCCTTCTCTTCGAG+CGG + Chr8:60528356-60528375 None:intergenic 55.0%
CTAAGAGCCGCTCGAAGAGA+AGG - Chr8:60528346-60528365 MsG0880045523.01.T01:intron 55.0%
CTGGCGTAACAGGTCCATTC+AGG - Chr8:60526301-60526320 MsG0880045523.01.T01:CDS 55.0%
CTTGTGCGTCTGATCACTGC+CGG - Chr8:60526747-60526766 MsG0880045523.01.T01:intron 55.0%
GAAACAACCCAGAGACCACG+CGG - Chr8:60526513-60526532 MsG0880045523.01.T01:CDS 55.0%
GACGCGAAGATCCTGAACCT+TGG + Chr8:60528284-60528303 None:intergenic 55.0%
GACTCCTGATGCAACGAGTG+AGG - Chr8:60525756-60525775 MsG0880045523.01.T01:CDS 55.0%
GAGAAAGGTCCCCAAAAGGG+TGG - Chr8:60527704-60527723 MsG0880045523.01.T01:intron 55.0%
GATGACGACCATGGGAGGAA+TGG - Chr8:60525670-60525689 MsG0880045523.01.T01:CDS 55.0%
GTTCAGGATCTTCGCGTCTG+CGG - Chr8:60528286-60528305 MsG0880045523.01.T01:intron 55.0%
! ATGGTGATGACGACCATGGG+AGG - Chr8:60525665-60525684 MsG0880045523.01.T01:CDS 55.0%
! CTACTCACGGTCTTTTGGCC+AGG - Chr8:60526489-60526508 MsG0880045523.01.T01:CDS 55.0%
! CTCTTCAACTGTGGCTGGCT+TGG - Chr8:60524908-60524927 MsG0880045523.01.T01:CDS 55.0%
! GCAGCAATGCCACCCTTTTG+GGG + Chr8:60527716-60527735 None:intergenic 55.0%
!! GAGGGACCCTTGGTTTGGTT+TGG + Chr8:60524179-60524198 None:intergenic 55.0%
!! GGACTCGCAGGGTTGGTTAT+TGG - Chr8:60526385-60526404 MsG0880045523.01.T01:CDS 55.0%
!! GGGTCCAAAGGTGTTGAGTG+TGG - Chr8:60525852-60525871 MsG0880045523.01.T01:CDS 55.0%
!! GGTCTCTGGGTTGTTTCTCC+TGG + Chr8:60526510-60526529 None:intergenic 55.0%
!! TGGGGGATAAGCTTGCTGAG+AGG - Chr8:60525704-60525723 MsG0880045523.01.T01:CDS 55.0%
AAACCCAACCGCGTGGTCTC+TGG + Chr8:60526524-60526543 None:intergenic 60.0%
AACCCAACCGCGTGGTCTCT+GGG + Chr8:60526523-60526542 None:intergenic 60.0%
AACCCAGAGACCACGCGGTT+GGG - Chr8:60526518-60526537 MsG0880045523.01.T01:CDS 60.0%
AGATGCAAGCTGTCCCCACG+TGG + Chr8:60526216-60526235 None:intergenic 60.0%
GATCGGAACAGGGACTCGCA+GGG - Chr8:60526374-60526393 MsG0880045523.01.T01:CDS 60.0%
GCTCATGGCGACACAGACTG+TGG - Chr8:60525427-60525446 MsG0880045523.01.T01:CDS 60.0%
TGATCGGAACAGGGACTCGC+AGG - Chr8:60526373-60526392 MsG0880045523.01.T01:CDS 60.0%
!! CAGGCTAGTTCAGGTTGCCC+TGG - Chr8:60525789-60525808 MsG0880045523.01.T01:CDS 60.0%
CAACCCAGAGACCACGCGGT+TGG - Chr8:60526517-60526536 MsG0880045523.01.T01:CDS 65.0%
GGAACAGGGACTCGCAGGGT+TGG - Chr8:60526378-60526397 MsG0880045523.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 60523554 60528803 60523554 ID=MsG0880045523.01;Name=MsG0880045523.01
Chr8 mRNA 60523554 60528803 60523554 ID=MsG0880045523.01.T01;Parent=MsG0880045523.01;Name=MsG0880045523.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0.57|0.5|0.87|0.71|0.62|8|293|912
Chr8 exon 60523554 60523753 60523554 ID=MsG0880045523.01.T01:exon:14960;Parent=MsG0880045523.01.T01
Chr8 exon 60523776 60524354 60523776 ID=MsG0880045523.01.T01:exon:14959;Parent=MsG0880045523.01.T01
Chr8 exon 60524525 60524973 60524525 ID=MsG0880045523.01.T01:exon:14958;Parent=MsG0880045523.01.T01
Chr8 exon 60525027 60525058 60525027 ID=MsG0880045523.01.T01:exon:14957;Parent=MsG0880045523.01.T01
Chr8 exon 60525225 60525502 60525225 ID=MsG0880045523.01.T01:exon:14956;Parent=MsG0880045523.01.T01
Chr8 exon 60525587 60526737 60525587 ID=MsG0880045523.01.T01:exon:14955;Parent=MsG0880045523.01.T01
Chr8 exon 60527229 60527510 60527229 ID=MsG0880045523.01.T01:exon:14954;Parent=MsG0880045523.01.T01
Chr8 exon 60528743 60528803 60528743 ID=MsG0880045523.01.T01:exon:14953;Parent=MsG0880045523.01.T01
Chr8 CDS 60528743 60528803 60528743 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60527229 60527510 60527229 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60525587 60526737 60525587 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60525225 60525502 60525225 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60525027 60525058 60525027 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60524525 60524973 60524525 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 CDS 60523869 60524354 60523869 ID=MsG0880045523.01.T01:cds;Parent=MsG0880045523.01.T01
Chr8 three_prime_UTR 60523776 60523868 60523776 ID=MsG0880045523.01.T01:three_prime_utr;Parent=MsG0880045523.01.T01
Chr8 three_prime_UTR 60523554 60523753 60523554 ID=MsG0880045523.01.T01:three_prime_utr;Parent=MsG0880045523.01.T01
Gene Sequence

>MsG0880045523.01.T01

ATGCTTATCGTGCTTATTGTGAATGTTGAAGTTGCATCGAAGTCTCACATGTTAATGTATAAAATTGCAACCATGATTAGAGTTTGGTTTGTGGTGTTGATGGTTCTCTACAATTTGATGTTCTCTTCAACTGTGGCTGGCTTGGATAATTCCACAGTACCTCCATTTGTAAATATTGGAGTTCTCTACTCTTTCAATACTAGTGTTGGTAGAATGGTGAAAATTGCGGTAGAAGCTGCGGTTGCAGATATAAATTCTGATCCTGCTATTCTTGGTAATACTAAGTTGAACCTCTCACTGCAAGAAGATTCAAAATACAGAGGCTTTTTGAGCATTGCTGAGGCAGACATTGTTAGCCACTATGGTTGGAGAGAGGTTATCGCAGTCTATGGTGATGACGACCATGGGAGGAATGGAATTAGTGCGTTGGGGGATAAGCTTGCTGAGAGGCGTTGCAAGATCTCGTTTAAAGCAGCAATGACTCCTGATGCAACGAGTGAGGAGATTACTGACAGGCTAGTTCAGGTTGCCCTGGCAGAATCTCGGATTATTGTTCTACACACAAGTACTGCTTGGGGTCCAAAGGTGTTGAGTGTGGCGAAGTCTCTTGGAATGTTGCAAAATGGTTATGTCTGGATAGCTACTACTTTTCTCACATCTTATATTGACATAGATAGTCCTCTCTCTTCAGATGAAATGGATAACATTCAAGGAGTTCTAACACTAAGAATGTACATACCAGATTCTAAGCTCAAAAGATCGTTCATTTCTCGGTGGACCAATTTGACTAGTGGAAAGACTGCAAATGGTCCTCTTGGTTTAAGTACTTATGGTATCTTTGCATATGATACTGTTCATGTACTTGCCCGTGCCCTTGATACATTTCTGAAACAAGGAAACCAAATTACATTTTCGAACGATCCAAAGTTAAATAAACCACGTGGGGACAGCTTGCATCTTGACGCTGTGAAAATTTTCAATGAAGGAGATCTGTTACGTAAAAGTATATATGTGGTTAACATGACTGGCGTAACAGGTCCATTCAGGTATACACCTGATGGAAACCTTGCAAATCCAGCATATGAGATCATCAATGTGATCGGAACAGGGACTCGCAGGGTTGGTTATTGGTCTAATTACTCTGGATTATCAGTTATTCCTCCAGAAACACTTTATTCAAAACCGCCTAATCGTTCCATTGATAATCAAAAGCTACTCACGGTCTTTTGGCCAGGAGAAACAACCCAGAGACCACGCGGTTGGGTTTTTCCAAACAATGGAAAGCTGTTAAAAATCGGAGTACCTAGAAGGTCTAGTTACCGTGAATTTGTTTCTCAGGTACAATCCACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCTGCAGTAAACTTGTTGCCTTATGCTGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCAAAACAACCCAAGTAATACTGAGCTTGTGCGTCTGATCACTGCCGGTGTCTTTGATGCTGCAGTAGGTGACATCACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAGCCCTATATTGAGTCTGGCCTAGTGGTAGTAGCATCGGTTAAGAAGACGGATTCAAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTAACAGCTATATTTTTCCTACTAGTGGGAGCTGTTGTTTGGATTCTAGAGCATAGACTGAATGATGATTTTAGAGGACCTCCTAAACAACAAGTAGCAACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCGCTCACACAACTTCGAGTAAATATATTCTCTTTTTTCCATACAATGTAGGGGAAAATACTAAGAGCACTCTTGGTCGTTTTGTCCTGCTTATATGGCTATTTGTAGTTCTAATAATTAACTCGAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTATTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGATCCTGTTGGTTACTTGCAGGGTTCCTTTTCCCGGTCTTATTTGATTGACGAAATCGGTATTCATGAATCGAGATTAGTTCCTATGAAAACACCTGAAGAAACTATGAAGGCACTGGAGAAAGGTCCCCAAAAGGGTGGCATTGCTGCATATGTTGACGAGCGTGCTTACATAGAGCTCTTCCTTTCAAGCCGGTGTGATTTTAGTATTGTAGGTCAAGAGTTTACCAGAAATGGCTGGGGATTTGCCTTTCCACCAGACTCACCATTAGCAGTTGACCTGTCAACTGCCATTTTGGAGTTGGCAGAAAGTGGAGATTTACAAAGGATCCATGACAAATGGCTCTTGAGCAGTGCTTGTAGATCACAAGGTGCTAAGCTTGAAGTAGACAGACTCAATCTCAAGAGCTTTTGGGGTCTTTACCTAGTTTGTGGTTTGGCATGTTTCCTTGCACTCCTAATATATTTTATTCAAACCGTGAGGCAGTACAAGAAGCACAGTCCAGACGAACTAGAGTCTTCTGTCCAAGGTTCAGGATCTTCGCGTCTGCGGACGTTTCTATCATTTGTAGATGAAAAAGAATCGATAGCTAAGAGCCGCTCGAAGAGAAGGCAAACGGAAAGGATATCATATAGAAGCACAAGTGAGGTTGGATCAAACATCACCACCAATAAAGATTTTTCACGGTCATCAACATCGTTAAACAGAATTGATACTCCTAATATAGTCTGA
Protein sequence

>MsG0880045523.01.T01

MLIVLIVNVEVASKSHMLMYKIATMIRVWFVVLMVLYNLMFSSTVAGLDNSTVPPFVNIGVLYSFNTSVGRMVKIAVEAAVADINSDPAILGNTKLNLSLQEDSKYRGFLSIAEADIVSHYGWREVIAVYGDDDHGRNGISALGDKLAERRCKISFKAAMTPDATSEEITDRLVQVALAESRIIVLHTSTAWGPKVLSVAKSLGMLQNGYVWIATTFLTSYIDIDSPLSSDEMDNIQGVLTLRMYIPDSKLKRSFISRWTNLTSGKTANGPLGLSTYGIFAYDTVHVLARALDTFLKQGNQITFSNDPKLNKPRGDSLHLDAVKIFNEGDLLRKSIYVVNMTGVTGPFRYTPDGNLANPAYEIINVIGTGTRRVGYWSNYSGLSVIPPETLYSKPPNRSIDNQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPRRSSYREFVSQVQSTDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGQNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGPPKQQVATILWFSFSTMFFAHTTSSKYILFFPYNVGENTKSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKDPVGYLQGSFSRSYLIDEIGIHESRLVPMKTPEETMKALEKGPQKGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPPDSPLAVDLSTAILELAESGDLQRIHDKWLLSSACRSQGAKLEVDRLNLKSFWGLYLVCGLACFLALLIYFIQTVRQYKKHSPDELESSVQGSGSSRLRTFLSFVDEKESIAKSRSKRRQTERISYRSTSEVGSNITTNKDFSRSSTSLNRIDTPNIV*