AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046352.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046352.01.T01 MTR_4g106690 79.741 232 0 2 1 232 1 185 9.42e-127 356
MsG0880046352.01.T01 MTR_8g028920 58.442 231 49 2 1 231 1 184 5.21e-88 258
MsG0880046352.01.T01 MTR_8g098595 57.407 216 42 3 16 231 1 166 2.66e-77 230
MsG0880046352.01.T01 MTR_8g028920 53.723 188 40 2 44 231 5 145 1.24e-61 190
MsG0880046352.01.T01 MTR_1g073600 54.472 123 20 2 44 166 37 123 2.17e-36 125
MsG0880046352.01.T01 MTR_8g098615 70.423 71 21 0 10 80 1 71 3.58e-31 110
MsG0880046352.01.T01 MTR_8g098615 73.438 64 17 0 17 80 1 64 1.59e-28 103
MsG0880046352.01.T01 MTR_8g098635 70.588 68 20 0 16 83 6 73 7.15e-25 101
MsG0880046352.01.T01 MTR_1g073390 71.212 66 17 2 16 80 1 65 4.46e-24 92.4
MsG0880046352.01.T01 MTR_8g468530 25.904 166 95 3 1 162 17 158 1.10e-19 83.2
MsG0880046352.01.T01 MTR_4g108080 25.904 166 95 3 1 162 1 142 1.12e-19 82.8
MsG0880046352.01.T01 MTR_2g078010 40.741 81 47 1 27 107 32 111 3.14e-19 80.5
MsG0880046352.01.T01 MTR_2g078010 43.421 76 42 1 27 102 32 106 7.80e-19 80.5
MsG0880046352.01.T01 MTR_2g078010 36.364 121 53 3 27 147 32 128 1.16e-18 80.1
MsG0880046352.01.T01 MTR_7g116940 27.439 164 101 4 1 163 1 147 4.28e-17 75.9
MsG0880046352.01.T01 MTR_1g021150 30.216 139 73 4 25 163 26 140 7.03e-17 75.1
MsG0880046352.01.T01 MTR_1g021150 30.216 139 73 4 25 163 34 148 9.98e-17 75.1
MsG0880046352.01.T01 MTR_8g071040 27.607 163 93 5 1 162 1 139 1.57e-16 74.3
MsG0880046352.01.T01 MTR_4g108080 27.200 125 67 2 38 162 42 142 4.81e-16 73.2
MsG0880046352.01.T01 MTR_3g062450 26.797 153 88 4 11 163 12 140 7.63e-16 72.4
MsG0880046352.01.T01 MTR_5g075580 26.797 153 88 4 11 163 12 140 7.87e-16 72.4
MsG0880046352.01.T01 MTR_7g116940 26.797 153 88 4 11 163 12 140 8.55e-16 72.4
MsG0880046352.01.T01 MTR_5g075580 29.323 133 70 4 31 163 3 111 8.80e-16 71.6
MsG0880046352.01.T01 MTR_3g110110 23.944 142 83 2 11 150 14 132 1.07e-15 72.4
MsG0880046352.01.T01 MTR_4g108080 29.358 109 72 2 1 105 1 108 1.09e-15 71.2
MsG0880046352.01.T01 MTR_3g098780 36.250 80 51 0 18 97 21 100 1.09e-15 73.2
MsG0880046352.01.T01 MTR_3g098780 36.250 80 51 0 18 97 45 124 1.66e-15 73.2
MsG0880046352.01.T01 MTR_4g073240 30.159 126 64 4 38 163 10 111 2.50e-15 70.1
MsG0880046352.01.T01 MTR_4g073240 27.536 138 76 4 25 162 26 139 3.33e-15 70.9
MsG0880046352.01.T01 MTR_5g009020 30.612 147 75 5 6 149 35 157 5.89e-15 70.9
MsG0880046352.01.T01 MTR_2g078010 32.593 135 53 4 27 147 32 142 7.04e-15 70.5
MsG0880046352.01.T01 MTR_7g116940 31.250 96 64 2 1 95 1 95 1.05e-14 68.9
MsG0880046352.01.T01 MTR_4g076200 30.719 153 67 5 6 149 35 157 2.03e-14 69.3
MsG0880046352.01.T01 MTR_1g095510 30.769 169 88 6 2 166 40 183 4.67e-14 68.6
MsG0880046352.01.T01 MTR_1g095510 36.000 100 59 3 2 97 40 138 1.67e-13 66.6
MsG0880046352.01.T01 MTR_5g019480 27.941 136 73 3 27 162 8 118 5.03e-13 64.7
MsG0880046352.01.T01 MTR_4g076200 33.036 112 51 3 38 149 29 116 5.21e-13 64.7
MsG0880046352.01.T01 MTR_5g019480 27.941 136 73 3 27 162 56 166 8.25e-13 65.1
MsG0880046352.01.T01 MTR_5g019480 27.941 136 73 3 27 162 59 169 8.86e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046352.01.T01 AT1G63800 56.277 231 54 2 1 231 1 184 4.86e-85 251
MsG0880046352.01.T01 AT5G41340 63.590 195 24 2 1 195 1 148 2.66e-83 246
MsG0880046352.01.T01 AT2G46030 59.296 199 34 2 1 199 1 152 7.16e-78 233
MsG0880046352.01.T01 AT2G46030 59.296 199 34 2 1 199 1 152 7.16e-78 233
MsG0880046352.01.T01 AT2G46030 59.296 199 34 2 1 199 73 224 5.42e-77 233
MsG0880046352.01.T01 AT1G63800 53.704 216 53 2 16 231 1 169 3.62e-74 223
MsG0880046352.01.T01 AT2G46030 56.150 187 35 2 13 199 16 155 6.49e-67 205
MsG0880046352.01.T01 AT2G46030 56.150 187 35 2 13 199 16 155 6.49e-67 205
MsG0880046352.01.T01 AT5G41340 57.792 154 18 2 42 195 7 113 1.16e-55 175
MsG0880046352.01.T01 AT1G78870 41.975 81 46 1 27 107 32 111 7.60e-20 82.0
MsG0880046352.01.T01 AT2G02760 25.904 166 95 3 1 162 1 142 1.59e-19 82.4
MsG0880046352.01.T01 AT2G02760 25.904 166 95 3 1 162 1 142 1.59e-19 82.4
MsG0880046352.01.T01 AT2G02760 25.904 166 95 3 1 162 1 142 1.59e-19 82.4
MsG0880046352.01.T01 AT2G02760 25.904 166 95 3 1 162 1 142 1.59e-19 82.4
MsG0880046352.01.T01 AT5G62540 27.273 165 92 3 1 161 1 141 2.51e-19 81.6
MsG0880046352.01.T01 AT1G14400 25.904 166 95 3 1 162 1 142 2.86e-19 81.6
MsG0880046352.01.T01 AT1G14400 25.904 166 95 3 1 162 1 142 2.86e-19 81.6
MsG0880046352.01.T01 AT1G78870 37.190 121 52 3 27 147 32 128 3.43e-19 81.6
MsG0880046352.01.T01 AT1G16890 37.931 116 48 3 32 147 4 95 9.99e-19 79.3
MsG0880046352.01.T01 AT1G78870 37.931 116 48 3 32 147 4 95 1.09e-18 79.3
MsG0880046352.01.T01 AT1G16890 37.931 116 48 3 32 147 37 128 1.24e-18 80.1
MsG0880046352.01.T01 AT1G16890 37.931 116 48 3 32 147 46 137 2.39e-18 79.3
MsG0880046352.01.T01 AT5G25760 26.056 142 80 2 11 150 14 132 2.73e-17 76.6
MsG0880046352.01.T01 AT5G25760 26.056 142 80 2 11 150 14 132 2.73e-17 76.6
MsG0880046352.01.T01 AT3G08690 28.758 153 85 4 11 163 12 140 2.91e-17 76.3
MsG0880046352.01.T01 AT3G08690 28.758 153 85 4 11 163 12 140 2.91e-17 76.3
MsG0880046352.01.T01 AT1G78870 37.607 117 48 4 32 147 4 96 5.75e-17 74.7
MsG0880046352.01.T01 AT5G50870 28.788 132 71 1 26 157 29 137 8.45e-17 76.3
MsG0880046352.01.T01 AT5G53300 28.105 153 86 4 11 163 12 140 1.16e-16 74.7
MsG0880046352.01.T01 AT5G53300 28.105 153 86 4 11 163 12 140 1.16e-16 74.7
MsG0880046352.01.T01 AT5G53300 28.105 153 86 4 11 163 12 140 1.16e-16 74.7
MsG0880046352.01.T01 AT5G41700 30.579 121 72 3 25 134 26 145 1.17e-16 74.7
MsG0880046352.01.T01 AT5G50870 38.889 72 44 0 26 97 29 100 1.32e-16 75.9
MsG0880046352.01.T01 AT5G41700 27.607 163 89 5 5 162 2 140 2.20e-16 73.9
MsG0880046352.01.T01 AT5G41700 27.632 152 86 4 11 162 12 139 2.25e-16 73.9
MsG0880046352.01.T01 AT5G41700 27.632 152 86 4 11 162 12 139 2.25e-16 73.9
MsG0880046352.01.T01 AT5G41700 27.632 152 86 4 11 162 12 139 2.25e-16 73.9
MsG0880046352.01.T01 AT1G64230 28.472 144 79 4 20 163 30 149 3.19e-16 73.6
MsG0880046352.01.T01 AT4G27960 27.632 152 86 4 11 162 12 139 3.86e-16 73.2
MsG0880046352.01.T01 AT1G64230 27.451 153 87 4 11 163 12 140 4.33e-16 73.2
MsG0880046352.01.T01 AT1G64230 27.451 153 87 4 11 163 12 140 4.33e-16 73.2
MsG0880046352.01.T01 AT1G64230 26.174 149 86 3 15 163 58 182 4.36e-16 74.3
MsG0880046352.01.T01 AT1G64230 26.174 149 86 3 15 163 58 182 4.36e-16 74.3
MsG0880046352.01.T01 AT5G56150 29.412 136 72 4 27 162 28 139 7.83e-16 72.4
MsG0880046352.01.T01 AT4G27960 27.607 163 93 5 1 162 31 169 8.27e-16 73.2
MsG0880046352.01.T01 AT3G08700 31.061 132 67 3 31 162 33 140 1.10e-15 72.0
MsG0880046352.01.T01 AT3G08700 31.061 132 67 3 31 162 33 140 1.10e-15 72.0
MsG0880046352.01.T01 AT5G53300 32.292 96 63 2 1 95 1 95 1.82e-15 70.5
MsG0880046352.01.T01 AT2G16740 27.607 163 90 5 5 163 2 140 1.93e-15 71.2
MsG0880046352.01.T01 AT5G56150 37.681 69 42 1 27 95 28 95 2.90e-15 69.7
MsG0880046352.01.T01 AT4G36800 27.206 136 74 4 27 162 57 167 5.93e-14 68.2
MsG0880046352.01.T01 AT4G36800 27.206 136 74 4 27 162 57 167 5.93e-14 68.2
MsG0880046352.01.T01 AT3G24515 31.707 82 51 2 31 108 71 151 1.37e-13 69.7
MsG0880046352.01.T01 AT3G24515 29.630 81 52 2 32 108 47 126 1.72e-13 69.3
MsG0880046352.01.T01 AT3G20060 29.932 147 76 5 6 149 39 161 1.07e-12 64.7
MsG0880046352.01.T01 AT1G36340 30.769 78 53 1 18 95 25 101 1.47e-12 63.9
MsG0880046352.01.T01 AT1G36340 30.769 78 53 1 18 95 25 101 1.47e-12 63.9
MsG0880046352.01.T01 AT3G20060 32.143 112 52 3 38 149 29 116 9.80e-12 61.2
MsG0880046352.01.T01 AT2G18600 27.419 124 66 4 39 162 69 168 1.44e-11 61.6
MsG0880046352.01.T01 AT2G18600 27.419 124 66 4 39 162 69 168 1.44e-11 61.6

Find 63 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGAACGAATTGAGATAAA+TGG 0.186313 8:+72318821 None:intergenic
TCTCAACGCCATCGCCATTA+AGG 0.220251 8:-72318709 MsG0880046352.01.T01:five_prime_UTR
CCATCGCCATTAAGGGTTTC+AGG 0.232196 8:-72318701 MsG0880046352.01.T01:intron
CATGCTCACCTTTAACCTTT+TGG 0.263942 8:+72314099 None:intergenic
ATATTGACAGTACTTTCTTT+TGG 0.310636 8:+72315306 None:intergenic
TATAGAATGGATTAATATCT+TGG 0.312728 8:-72313894 MsG0880046352.01.T01:intron
GGCTTGCCTGAAACCCTTAA+TGG 0.336865 8:+72318695 None:intergenic
CTGTATGACCAAAAGGTTAA+AGG 0.341223 8:-72314107 MsG0880046352.01.T01:CDS
GAGATGAAAGAGAGAGTGAT+TGG 0.351259 8:+72318728 None:intergenic
GAATTCAATGTGGAGTTTCA+TGG 0.358816 8:-72315330 MsG0880046352.01.T01:CDS
TTGTTCACAAAGCCGATAGA+AGG 0.360758 8:+72314730 None:intergenic
TCCAGACTCCACCTTCATAA+AGG 0.365613 8:+72314794 None:intergenic
TTCAAAGGATCTGAAGCATT+TGG 0.371471 8:+72314167 None:intergenic
CGAACATTGGACTCCATGAT+TGG 0.373972 8:+72314425 None:intergenic
GCCTTTATGAAGGTGGAGTC+TGG 0.376619 8:-72314795 MsG0880046352.01.T01:CDS
TCCAGTGATGATGAAATTCC+TGG 0.381920 8:-72313649 MsG0880046352.01.T01:CDS
TCCATTTCTCGTCTCTTGCT+TGG 0.398772 8:+72317161 None:intergenic
CTCAACGCCATCGCCATTAA+GGG 0.400117 8:-72318708 MsG0880046352.01.T01:five_prime_UTR
ATGAACGAATTGAGATAAAT+GGG 0.402550 8:+72318822 None:intergenic
GAAACCTTGGTCATATCTAT+AGG 0.419679 8:+72314248 None:intergenic
GCTTACAGCTCATCAACATT+CGG 0.445297 8:+72314697 None:intergenic
GCCAGGAATTTCATCATCAC+TGG 0.460541 8:+72313648 None:intergenic
CAGATCTGGCTCTGTATGCT+TGG 0.463272 8:-72314458 MsG0880046352.01.T01:CDS
TCCAAGCAAGAGACGAGAAA+TGG 0.465002 8:-72317162 MsG0880046352.01.T01:CDS
CCGATAGAAGGGGATTTGTA+TGG 0.468086 8:+72314742 None:intergenic
AGATGAAAGAGAGAGTGATT+GGG 0.468414 8:+72318729 None:intergenic
AATGCTTCAGATCCTTTGAA+TGG 0.471129 8:-72314164 MsG0880046352.01.T01:CDS
CTTACAGCTCATCAACATTC+GGG 0.476865 8:+72314698 None:intergenic
GAGAAAAGGAAGAGAGAATG+AGG 0.483779 8:+72318758 None:intergenic
TGGACGTCATTAACCAATCA+TGG 0.487201 8:-72314438 MsG0880046352.01.T01:CDS
ATAAATGGGAGAAGAGAAGA+TGG 0.487212 8:+72318836 None:intergenic
GATTTGTATGGATATGCATC+AGG 0.500827 8:+72314754 None:intergenic
ATAGAATGGATTAATATCTT+GGG 0.504298 8:-72313893 MsG0880046352.01.T01:intron
CAATCATGGAGTCCAATGTT+CGG 0.515741 8:-72314424 MsG0880046352.01.T01:intron
ATAACAAAATTACCGAACAT+TGG 0.522849 8:+72314412 None:intergenic
TTGTGAGCGGTATGCTAAGA+AGG 0.524296 8:-72313743 MsG0880046352.01.T01:CDS
TGATTGGGAGAAACGAGAAA+AGG 0.526534 8:+72318744 None:intergenic
TGCAGCATCCTTAATGATGA+AGG 0.531821 8:-72314138 MsG0880046352.01.T01:CDS
ATTATTGCAGGCCTTTATGA+AGG 0.534502 8:-72314805 MsG0880046352.01.T01:intron
CTCGTCATCAGCTGTGCCGT+TGG 0.537885 8:+72313711 None:intergenic
ATTTAAAGATCAGCACGGCC+AGG 0.541597 8:+72313631 None:intergenic
TGTTCACAAAGCCGATAGAA+GGG 0.546387 8:+72314731 None:intergenic
CCATACAAATCCCCTTCTAT+CGG 0.549786 8:-72314742 MsG0880046352.01.T01:CDS
CCTGAAACCCTTAATGGCGA+TGG 0.564001 8:+72318701 None:intergenic
GATGCTGCATCGCCATTCAA+AGG 0.568638 8:+72314152 None:intergenic
CATATCTATAGGCATTAAGA+AGG 0.572853 8:+72314259 None:intergenic
TATAGGCATTAAGAAGGTGG+TGG 0.574992 8:+72314265 None:intergenic
ATTGCAGGCCTTTATGAAGG+TGG 0.584573 8:-72314802 MsG0880046352.01.T01:intron
TTTGGATAAAGCAAGAGTTG+TGG 0.594485 8:+72314185 None:intergenic
ATCTATAGGCATTAAGAAGG+TGG 0.608758 8:+72314262 None:intergenic
CAACGGCACAGCTGATGACG+AGG 0.614647 8:-72313710 MsG0880046352.01.T01:CDS
AAGGTATTTAAAGATCAGCA+CGG 0.617619 8:+72313626 None:intergenic
GTTCACAAAGCCGATAGAAG+GGG 0.618434 8:+72314732 None:intergenic
TTTGTACTGTGGTATTTGTG+GGG 0.627093 8:-72313774 MsG0880046352.01.T01:CDS
ACAGTGGAAACGATAAATGA+CGG 0.638053 8:-72315360 MsG0880046352.01.T01:CDS
AAGAAGGAACACATTACCAA+CGG 0.670344 8:-72313727 MsG0880046352.01.T01:CDS
TGATGACGAGGAGAGTGACG+AGG 0.679859 8:-72313698 MsG0880046352.01.T01:CDS
GATGATGAGTGATTATACAG+TGG 0.689022 8:-72315376 MsG0880046352.01.T01:CDS
CGGACTCACTGAATTCAATG+TGG 0.692475 8:-72315340 MsG0880046352.01.T01:CDS
ACAGCTCATCAACATTCGGG+TGG 0.696621 8:+72314701 None:intergenic
AATGCCTATAGATATGACCA+AGG 0.704248 8:-72314252 MsG0880046352.01.T01:CDS
TGACGAGGAGAGTGACGAGG+AGG 0.721013 8:-72313695 MsG0880046352.01.T01:CDS
TGGGGACAGAGTATTGTGAG+CGG 0.724857 8:-72313756 MsG0880046352.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTAAATATACATTTAAC+TGG + Chr8:72316069-72316088 None:intergenic 15.0%
!! AATGTAAGAAAAAAACAATT+AGG + Chr8:72314370-72314389 None:intergenic 15.0%
!! AATTACTATGCAATATATTA+GGG + Chr8:72314541-72314560 None:intergenic 15.0%
!! ATTTAATACTTCTTAGATTT+GGG - Chr8:72317875-72317894 MsG0880046352.01.T01:intron 15.0%
!! GACATTATATTTATAAGAAT+TGG - Chr8:72315703-72315722 MsG0880046352.01.T01:intron 15.0%
!! TATTTAATACTTCTTAGATT+TGG - Chr8:72317874-72317893 MsG0880046352.01.T01:intron 15.0%
!! TTTATATATAAAAGCAAAAG+AGG + Chr8:72313857-72313876 None:intergenic 15.0%
!! TTTGAATTAAATCAAAGTTA+GGG + Chr8:72316036-72316055 None:intergenic 15.0%
!!! AAGATATTTGTTATCAAATA+AGG + Chr8:72318641-72318660 None:intergenic 15.0%
!!! TAATTGTTTTTTTCTTACAT+TGG - Chr8:72314369-72314388 MsG0880046352.01.T01:intron 15.0%
!!! TCATTCTCTTTTAATTTTAA+TGG - Chr8:72315141-72315160 MsG0880046352.01.T01:intron 15.0%
!!! TTTTGAATTAAATCAAAGTT+AGG + Chr8:72316037-72316056 None:intergenic 15.0%
!! AAAAAAAACTGTACTGAATT+TGG + Chr8:72318449-72318468 None:intergenic 20.0%
!! AAAACAGTAAGAACAATAAA+TGG - Chr8:72314775-72314794 MsG0880046352.01.T01:CDS 20.0%
!! AAAGTTTGTATTTGTTTGAT+GGG - Chr8:72315081-72315100 MsG0880046352.01.T01:intron 20.0%
!! AACAAAAACATAAACTAGTA+AGG + Chr8:72314405-72314424 None:intergenic 20.0%
!! AATGAGAAAATGATACATAA+TGG - Chr8:72318470-72318489 MsG0880046352.01.T01:intron 20.0%
!! ACCATAAATAAATATCTACA+TGG + Chr8:72315612-72315631 None:intergenic 20.0%
!! ATATAAATAAATCCTCTCTT+GGG - Chr8:72313870-72313889 MsG0880046352.01.T01:intron 20.0%
!! ATTACTCATCTTAAATTATC+TGG - Chr8:72317633-72317652 MsG0880046352.01.T01:intron 20.0%
!! CAATTACTATGCAATATATT+AGG + Chr8:72314542-72314561 None:intergenic 20.0%
!! CCATAAATAAATATCTACAT+GGG + Chr8:72315611-72315630 None:intergenic 20.0%
!! GAAACATATTTCAACTAATT+TGG + Chr8:72315414-72315433 None:intergenic 20.0%
!! GAATTGGATAGATTTATATA+AGG - Chr8:72315719-72315738 MsG0880046352.01.T01:intron 20.0%
!! TAAAGTTTGTATTTGTTTGA+TGG - Chr8:72315080-72315099 MsG0880046352.01.T01:intron 20.0%
!! TATATAAATAAATCCTCTCT+TGG - Chr8:72313869-72313888 MsG0880046352.01.T01:intron 20.0%
!! TTGAATTAAATCAAAGTTAG+GGG + Chr8:72316035-72316054 None:intergenic 20.0%
!! TTTAATACTTCTTAGATTTG+GGG - Chr8:72317876-72317895 MsG0880046352.01.T01:intron 20.0%
!! TTTATTAGATGAATGAATGT+TGG - Chr8:72314743-72314762 MsG0880046352.01.T01:CDS 20.0%
!! TTTATTTCATCCATTATTCT+TGG + Chr8:72316433-72316452 None:intergenic 20.0%
!!! AAACTGAAATGAGATTTTTT+GGG - Chr8:72314066-72314085 MsG0880046352.01.T01:intron 20.0%
!!! AAATTATTTTCAGCTTATTG+GGG - Chr8:72315164-72315183 MsG0880046352.01.T01:intron 20.0%
!!! AATATTCTTTCCTTTTTTAC+AGG - Chr8:72317087-72317106 MsG0880046352.01.T01:intron 20.0%
!!! AATATTTTCAATCAACAATG+TGG + Chr8:72314847-72314866 None:intergenic 20.0%
!!! ATAGAATGGATTAATATCTT+GGG - Chr8:72318592-72318611 MsG0880046352.01.T01:intron 20.0%
!!! ATTTATTTATGGTTTTGAGT+CGG - Chr8:72315619-72315638 MsG0880046352.01.T01:intron 20.0%
!!! GAAATTATTTTCAGCTTATT+GGG - Chr8:72315163-72315182 MsG0880046352.01.T01:intron 20.0%
!!! GTGTAACAAATATGTATTTT+TGG - Chr8:72315227-72315246 MsG0880046352.01.T01:intron 20.0%
!!! GTTGATTGAAAATATTTTGT+TGG - Chr8:72314851-72314870 MsG0880046352.01.T01:intron 20.0%
!!! TATAGAATGGATTAATATCT+TGG - Chr8:72318591-72318610 MsG0880046352.01.T01:intron 20.0%
!!! TGAAGAATTTTTTTTCTTCA+TGG - Chr8:72317932-72317951 MsG0880046352.01.T01:intron 20.0%
!!! TGATTTACTTTTTATGTTAG+TGG - Chr8:72315375-72315394 MsG0880046352.01.T01:CDS 20.0%
!!! TTTTTTTGTTAACTTCAGAA+GGG + Chr8:72316296-72316315 None:intergenic 20.0%
!!! TTTTTTTTGTTAACTTCAGA+AGG + Chr8:72316297-72316316 None:intergenic 20.0%
! AACAACAAAAAGATCACTAA+GGG + Chr8:72315791-72315810 None:intergenic 25.0%
! AACTAGAACTGATTAATGTA+GGG + Chr8:72318568-72318587 None:intergenic 25.0%
! AATGAACGAATTGAGATAAA+TGG + Chr8:72313667-72313686 None:intergenic 25.0%
! ACAAAACAGTATACAATGAA+AGG + Chr8:72314257-72314276 None:intergenic 25.0%
! ACTGAAAAACAAAATGACAA+TGG - Chr8:72316816-72316835 MsG0880046352.01.T01:intron 25.0%
! AGAAAACAATAACATTATGC+AGG + Chr8:72316259-72316278 None:intergenic 25.0%
! AGAAAATTGAAATCCATCTT+AGG + Chr8:72314708-72314727 None:intergenic 25.0%
! AGACTCTTAGAAAAGTTTAT+TGG + Chr8:72314447-72314466 None:intergenic 25.0%
! ATAACAAAATTACCGAACAT+TGG + Chr8:72318076-72318095 None:intergenic 25.0%
! ATCTAATGTGATTATCTAGT+GGG - Chr8:72314648-72314667 MsG0880046352.01.T01:intron 25.0%
! ATGAACGAATTGAGATAAAT+GGG + Chr8:72313666-72313685 None:intergenic 25.0%
! ATTAATGCTACAGAGATAAA+AGG + Chr8:72317534-72317553 None:intergenic 25.0%
! ATTTGTCTTGAATCTTGATT+AGG - Chr8:72317504-72317523 MsG0880046352.01.T01:intron 25.0%
! CAAAACAGTATACAATGAAA+GGG + Chr8:72314256-72314275 None:intergenic 25.0%
! CATGAATTTCACTAAATCAT+AGG + Chr8:72317303-72317322 None:intergenic 25.0%
! CCCATGTAGATATTTATTTA+TGG - Chr8:72315608-72315627 MsG0880046352.01.T01:intron 25.0%
! CTGAAAAACAAAATGACAAT+GGG - Chr8:72316817-72316836 MsG0880046352.01.T01:intron 25.0%
! GAAAATTGAAATCCATCTTA+GGG + Chr8:72314707-72314726 None:intergenic 25.0%
! GAATGAGGAAAAAGATATAT+AGG + Chr8:72313715-72313734 None:intergenic 25.0%
! GGATATTAATATTGTTGTGT+CGG - Chr8:72314139-72314158 MsG0880046352.01.T01:CDS 25.0%
! TAAAAATGAGATGCAAATGA+AGG + Chr8:72314895-72314914 None:intergenic 25.0%
! TAAAATATGGAGGAAAAAAG+AGG + Chr8:72314221-72314240 None:intergenic 25.0%
! TAACAACAAAAAGATCACTA+AGG + Chr8:72315792-72315811 None:intergenic 25.0%
! TAGGATAAACAGACAAATAA+AGG + Chr8:72314965-72314984 None:intergenic 25.0%
! TAGTTGAAATATGTTTCAGT+TGG - Chr8:72315417-72315436 MsG0880046352.01.T01:intron 25.0%
! TATCTAATGTGATTATCTAG+TGG - Chr8:72314647-72314666 MsG0880046352.01.T01:intron 25.0%
! TGAATTAAATCAAAGTTAGG+GGG + Chr8:72316034-72316053 None:intergenic 25.0%
! TGCATACAAATTATAGTTGA+GGG - Chr8:72316338-72316357 MsG0880046352.01.T01:intron 25.0%
! TTCAAAAATCACTAGACAAA+AGG + Chr8:72314940-72314959 None:intergenic 25.0%
! TTTATTTGTCTGTTTATCCT+AGG - Chr8:72314964-72314983 MsG0880046352.01.T01:intron 25.0%
!! AAAAATTCAGCAGGATTTTA+TGG - Chr8:72318192-72318211 MsG0880046352.01.T01:intron 25.0%
!! AATTATTTTCAGCTTATTGG+GGG - Chr8:72315165-72315184 MsG0880046352.01.T01:intron 25.0%
!! ACAATCATTTCTGAAAAAGA+AGG + Chr8:72314679-72314698 None:intergenic 25.0%
!! ACTATAATTTGTATGCACTT+TGG + Chr8:72316335-72316354 None:intergenic 25.0%
!! AGTTCTAGTTGTATATAGAA+TGG - Chr8:72318578-72318597 MsG0880046352.01.T01:intron 25.0%
!! ATAGCATTGTGTATGTATTT+TGG - Chr8:72318153-72318172 MsG0880046352.01.T01:intron 25.0%
!! ATATTGACAGTACTTTCTTT+TGG + Chr8:72317182-72317201 None:intergenic 25.0%
!! CTTTTTATCCTTCATCATTA+AGG + Chr8:72318358-72318377 None:intergenic 25.0%
!! GGAAATTATTTTCAGCTTAT+TGG - Chr8:72315162-72315181 MsG0880046352.01.T01:intron 25.0%
!! TGAAAATAGTTTTTGTACTG+TGG - Chr8:72318700-72318719 MsG0880046352.01.T01:intron 25.0%
!! TTTTACCACAATGAAATGAA+AGG + Chr8:72315207-72315226 None:intergenic 25.0%
!!! AAATCACCTTTTTTGTAACA+TGG - Chr8:72313950-72313969 MsG0880046352.01.T01:intron 25.0%
!!! AATCACCTTTTTTGTAACAT+GGG - Chr8:72313951-72313970 MsG0880046352.01.T01:intron 25.0%
!!! ACTTGTTGTAATTTTCCTTT+TGG - Chr8:72315260-72315279 MsG0880046352.01.T01:intron 25.0%
!!! ATGTTCGGTAATTTTGTTAT+AGG - Chr8:72318076-72318095 MsG0880046352.01.T01:intron 25.0%
!!! ATTTTTGCAACATCTAGTTT+GGG + Chr8:72316568-72316587 None:intergenic 25.0%
!!! CAAACTGAAATGAGATTTTT+TGG - Chr8:72314065-72314084 MsG0880046352.01.T01:intron 25.0%
!!! CAATGTTTTTTCATTTAACC+TGG - Chr8:72315007-72315026 MsG0880046352.01.T01:intron 25.0%
!!! CACAATACTTTTTAAAGAAG+AGG + Chr8:72317600-72317619 None:intergenic 25.0%
!!! CCTTATTTTCCATTTCATAT+GGG - Chr8:72315962-72315981 MsG0880046352.01.T01:intron 25.0%
!!! GCTTTACTTTTTGTAATGTA+AGG - Chr8:72315921-72315940 MsG0880046352.01.T01:intron 25.0%
!!! GTTATTTTTGTGATTATTGC+AGG - Chr8:72317668-72317687 MsG0880046352.01.T01:intron 25.0%
!!! TATTTTGTTGGTTTTATTCG+AGG - Chr8:72314863-72314882 MsG0880046352.01.T01:intron 25.0%
!!! TTTATTTTTCTTGACTCACT+GGG - Chr8:72315566-72315585 MsG0880046352.01.T01:intron 25.0%
!!! TTTCCAGTTTTTGGTTAAAT+GGG - Chr8:72313900-72313919 MsG0880046352.01.T01:intron 25.0%
!!! TTTTATTTTTCTTGACTCAC+TGG - Chr8:72315565-72315584 MsG0880046352.01.T01:intron 25.0%
!!! TTTTCCAGTTTTTGGTTAAA+TGG - Chr8:72313899-72313918 MsG0880046352.01.T01:intron 25.0%
AAATGGATCCACTAAATTAG+TGG - Chr8:72317340-72317359 MsG0880046352.01.T01:intron 30.0%
AACTGCAATCATGTAATACT+TGG - Chr8:72316720-72316739 MsG0880046352.01.T01:intron 30.0%
AAGTAGATTGAAATTTGAGC+AGG - Chr8:72314601-72314620 MsG0880046352.01.T01:intron 30.0%
AATATGTTTCAGTTGGAACT+TGG - Chr8:72315424-72315443 MsG0880046352.01.T01:intron 30.0%
AATGGATCCACTAAATTAGT+GGG - Chr8:72317341-72317360 MsG0880046352.01.T01:intron 30.0%
ACATACAATACAAGTAGTCT+AGG + Chr8:72315674-72315693 None:intergenic 30.0%
ACTAGAACTGATTAATGTAG+GGG + Chr8:72318567-72318586 None:intergenic 30.0%
ACTTTAATGTCAATTGCTGT+CGG - Chr8:72316085-72316104 MsG0880046352.01.T01:intron 30.0%
AGTAATATGACACACTGTTA+TGG - Chr8:72315471-72315490 MsG0880046352.01.T01:intron 30.0%
ATAGTCTCGATTCATTTAAC+CGG + Chr8:72316985-72317004 None:intergenic 30.0%
ATCTGAAAAAGTAGAAACCT+TGG + Chr8:72318253-72318272 None:intergenic 30.0%
CAACTAGAACTGATTAATGT+AGG + Chr8:72318569-72318588 None:intergenic 30.0%
CAATAAACCAAGTTCAAATG+TGG - Chr8:72315526-72315545 MsG0880046352.01.T01:intron 30.0%
CATATCTATAGGCATTAAGA+AGG + Chr8:72318229-72318248 None:intergenic 30.0%
CCCATATGAAATGGAAAATA+AGG + Chr8:72315965-72315984 None:intergenic 30.0%
CTAGATGTTGCAAAAATCTT+TGG - Chr8:72316571-72316590 MsG0880046352.01.T01:intron 30.0%
CTCAAACAATCCTTATTATG+CGG - Chr8:72316866-72316885 MsG0880046352.01.T01:intron 30.0%
CTCAAATTTCAATCTACTTG+TGG + Chr8:72314600-72314619 None:intergenic 30.0%
GAATGAATAGCACAAACATA+AGG + Chr8:72317036-72317055 None:intergenic 30.0%
GTACTTTAACCCATATGAAA+TGG + Chr8:72315974-72315993 None:intergenic 30.0%
GTGCATACAAATTATAGTTG+AGG - Chr8:72316337-72316356 MsG0880046352.01.T01:intron 30.0%
TAAAAAGCTGTATGACCAAA+AGG - Chr8:72318371-72318390 MsG0880046352.01.T01:intron 30.0%
TACTTGAAACTACTCTACAT+GGG + Chr8:72315821-72315840 None:intergenic 30.0%
TCAAACAATCCTTATTATGC+GGG - Chr8:72316867-72316886 MsG0880046352.01.T01:intron 30.0%
TCTAGGTCATGTCAAATAAA+AGG + Chr8:72315657-72315676 None:intergenic 30.0%
TTACTTGAAACTACTCTACA+TGG + Chr8:72315822-72315841 None:intergenic 30.0%
TTGACTAAGTTTACAACAGA+TGG - Chr8:72314118-72314137 MsG0880046352.01.T01:CDS 30.0%
! AGGAAAAGTTGATCGATATT+CGG + Chr8:72313837-72313856 None:intergenic 30.0%
! GATTTTTGCAACATCTAGTT+TGG + Chr8:72316569-72316588 None:intergenic 30.0%
! TTGATTTGACGTTAAAACCT+AGG + Chr8:72314984-72315003 None:intergenic 30.0%
! TTTGTCTTTTGATACTCTGA+AGG - Chr8:72314293-72314312 MsG0880046352.01.T01:intron 30.0%
! TTTTGTACTGTGGTATTTGT+GGG - Chr8:72318710-72318729 MsG0880046352.01.T01:five_prime_UTR 30.0%
! TTTTTGTACTGTGGTATTTG+TGG - Chr8:72318709-72318728 MsG0880046352.01.T01:five_prime_UTR 30.0%
!! GACACATTGTTGATTTAAGT+TGG - Chr8:72314797-72314816 MsG0880046352.01.T01:CDS 30.0%
!! GATTGAATGGATTACTGTAA+TGG + Chr8:72318541-72318560 None:intergenic 30.0%
!! GGTTATACTTATTTCTATCG+AGG - Chr8:72315492-72315511 MsG0880046352.01.T01:intron 30.0%
!! GTGATAGTTCACTTTTATAC+CGG - Chr8:72316963-72316982 MsG0880046352.01.T01:intron 30.0%
!! TACTGTCAATATTCTAGAGT+TGG - Chr8:72317190-72317209 MsG0880046352.01.T01:exon 30.0%
!! TTTTTGCAACATCTAGTTTG+GGG + Chr8:72316567-72316586 None:intergenic 30.0%
!!! GCCTTATTTTCCATTTCATA+TGG - Chr8:72315961-72315980 MsG0880046352.01.T01:intron 30.0%
!!! GGTTTTGATTTTCCAGTTTT+TGG - Chr8:72313891-72313910 MsG0880046352.01.T01:CDS 30.0%
AAACCAATGCGGCAATAAAA+AGG + Chr8:72314027-72314046 None:intergenic 35.0%
AACAGACGTAAACATAGACT+GGG + Chr8:72316489-72316508 None:intergenic 35.0%
AAGAAGGAACACATTACCAA+CGG - Chr8:72318758-72318777 MsG0880046352.01.T01:five_prime_UTR 35.0%
AAGTGTCATGTCTTTCTTTG+GGG - Chr8:72314497-72314516 MsG0880046352.01.T01:intron 35.0%
AATGCCTATAGATATGACCA+AGG - Chr8:72318233-72318252 MsG0880046352.01.T01:intron 35.0%
AATGCTTCAGATCCTTTGAA+TGG - Chr8:72318321-72318340 MsG0880046352.01.T01:intron 35.0%
AATTCCTCCACATTTGAACT+TGG + Chr8:72315536-72315555 None:intergenic 35.0%
ACAGACCTTTCATTTCATTG+TGG - Chr8:72315199-72315218 MsG0880046352.01.T01:intron 35.0%
ACAGTGGAAACGATAAATGA+CGG - Chr8:72317125-72317144 MsG0880046352.01.T01:intron 35.0%
ACTGACCCATGTTACAAAAA+AGG + Chr8:72313959-72313978 None:intergenic 35.0%
ACTTATTTCAACCTGCCAAA+AGG + Chr8:72315278-72315297 None:intergenic 35.0%
ACTTGAAACTACTCTACATG+GGG + Chr8:72315820-72315839 None:intergenic 35.0%
AGAGTGTATTGAACTGTAAG+GGG + Chr8:72316229-72316248 None:intergenic 35.0%
AGATGAAAGAGAGAGTGATT+GGG + Chr8:72313759-72313778 None:intergenic 35.0%
AGCTCTATAATCTAGACTGA+TGG + Chr8:72316930-72316949 None:intergenic 35.0%
ATAAATGGGAGAAGAGAAGA+TGG + Chr8:72313652-72313671 None:intergenic 35.0%
ATCTATAGGCATTAAGAAGG+TGG + Chr8:72318226-72318245 None:intergenic 35.0%
ATTATTGCAGGCCTTTATGA+AGG - Chr8:72317680-72317699 MsG0880046352.01.T01:intron 35.0%
CAACTTTACCAAAACCAATG+CGG + Chr8:72314038-72314057 None:intergenic 35.0%
CACTCATCATCCTGTAAAAA+AGG + Chr8:72317100-72317119 None:intergenic 35.0%
CTGCAGATTACCAAGAATAA+TGG - Chr8:72316420-72316439 MsG0880046352.01.T01:intron 35.0%
CTGTATGACCAAAAGGTTAA+AGG - Chr8:72318378-72318397 MsG0880046352.01.T01:intron 35.0%
GAAACCTTGGTCATATCTAT+AGG + Chr8:72318240-72318259 None:intergenic 35.0%
GAATTCAATGTGGAGTTTCA+TGG - Chr8:72317155-72317174 MsG0880046352.01.T01:CDS 35.0%
GATGATGAGTGATTATACAG+TGG - Chr8:72317109-72317128 MsG0880046352.01.T01:intron 35.0%
GATTTGTATGGATATGCATC+AGG + Chr8:72317734-72317753 None:intergenic 35.0%
GTATAGAGAATCAGAAATCC+AGG + Chr8:72315028-72315047 None:intergenic 35.0%
GTGTCTTAGGCTGTAAAATA+TGG + Chr8:72314234-72314253 None:intergenic 35.0%
TAAACCAAGTTCAAATGTGG+AGG - Chr8:72315529-72315548 MsG0880046352.01.T01:intron 35.0%
TCTATAATCTAGACTGATGG+TGG + Chr8:72316927-72316946 None:intergenic 35.0%
TCTTAGGCTGTAAAATATGG+AGG + Chr8:72314231-72314250 None:intergenic 35.0%
TGAGTCATACCACTTCAAAA+TGG - Chr8:72317323-72317342 MsG0880046352.01.T01:intron 35.0%
TGATTGTTCTTTCCCTAAGA+TGG - Chr8:72314692-72314711 MsG0880046352.01.T01:intron 35.0%
TGTGTTCATGAAAGGACAAA+GGG + Chr8:72316543-72316562 None:intergenic 35.0%
TTAAGCAGTTGTTGATCTGT+AGG - Chr8:72315863-72315882 MsG0880046352.01.T01:intron 35.0%
TTAGTGGTCTGCATTCTATT+AGG - Chr8:72316793-72316812 MsG0880046352.01.T01:intron 35.0%
TTTGGATAAAGCAAGAGTTG+TGG + Chr8:72318303-72318322 None:intergenic 35.0%
TTTGTACTGTGGTATTTGTG+GGG - Chr8:72318711-72318730 MsG0880046352.01.T01:five_prime_UTR 35.0%
! AATGTAGGGGTATGATTGAA+TGG + Chr8:72318554-72318573 None:intergenic 35.0%
! ATGTAATTTCTGCACTGATC+TGG - Chr8:72317841-72317860 MsG0880046352.01.T01:intron 35.0%
! ATTCTTAGCAAACGTTTTCG+CGG - Chr8:72317052-72317071 MsG0880046352.01.T01:intron 35.0%
! GAAGTGTCATGTCTTTCTTT+GGG - Chr8:72314496-72314515 MsG0880046352.01.T01:intron 35.0%
! GAGAGTGTATTGAACTGTAA+GGG + Chr8:72316230-72316249 None:intergenic 35.0%
! GTTGTAATTTTCCTTTTGGC+AGG - Chr8:72315264-72315283 MsG0880046352.01.T01:intron 35.0%
! TCACTAAATCATAGGAGTGT+TGG + Chr8:72317295-72317314 None:intergenic 35.0%
! TGAGAGTGTATTGAACTGTA+AGG + Chr8:72316231-72316250 None:intergenic 35.0%
! TGTAATTTCTGCACTGATCT+GGG - Chr8:72317842-72317861 MsG0880046352.01.T01:intron 35.0%
! TTACCTTTTTATTGCCGCAT+TGG - Chr8:72314021-72314040 MsG0880046352.01.T01:intron 35.0%
! TTCAAAGGATCTGAAGCATT+TGG + Chr8:72318321-72318340 None:intergenic 35.0%
! TTTTTGTAACATGGGTCAGT+CGG - Chr8:72313959-72313978 MsG0880046352.01.T01:intron 35.0%
!! ATACAATGAAAGGGTGTCTT+AGG + Chr8:72314247-72314266 None:intergenic 35.0%
!! TTAGTGGATCCATTTTGAAG+TGG + Chr8:72317335-72317354 None:intergenic 35.0%
!!! ACAATGGGTTGAACTTTTGA+TGG - Chr8:72316832-72316851 MsG0880046352.01.T01:intron 35.0%
!!! CTCTCTGCTTTCTTTTTTAG+TGG - Chr8:72316777-72316796 MsG0880046352.01.T01:intron 35.0%
!!! CTTGGTTTTGACTATTCATG+TGG - Chr8:72315442-72315461 MsG0880046352.01.T01:intron 35.0%
!!! GGTGAGCATGTTTTTAGTTA+TGG - Chr8:72318399-72318418 MsG0880046352.01.T01:intron 35.0%
!!! TTTTATTGCCGCATTGGTTT+TGG - Chr8:72314027-72314046 MsG0880046352.01.T01:intron 35.0%
AACGACGAGTCAACATTAGA+TGG + Chr8:72317559-72317578 None:intergenic 40.0%
AATCCTTATTATGCGGGACA+TGG - Chr8:72316873-72316892 MsG0880046352.01.T01:intron 40.0%
ACAGACGTAAACATAGACTG+GGG + Chr8:72316488-72316507 None:intergenic 40.0%
ACAGTTACCACACCAACAAA+GGG + Chr8:72316140-72316159 None:intergenic 40.0%
ACATCAAGCCAAACTTCAAG+GGG - Chr8:72315887-72315906 MsG0880046352.01.T01:intron 40.0%
AGAGCCATGTGAATCTTTGT+GGG - Chr8:72315056-72315075 MsG0880046352.01.T01:intron 40.0%
ATTCCTATCCTCGTGAAGAA+GGG + Chr8:72316400-72316419 None:intergenic 40.0%
CAACACCTTACTATTGGTAG+GGG - Chr8:72317955-72317974 MsG0880046352.01.T01:intron 40.0%
CAACAGACGTAAACATAGAC+TGG + Chr8:72316490-72316509 None:intergenic 40.0%
CAATCATGGAGTCCAATGTT+CGG - Chr8:72318061-72318080 MsG0880046352.01.T01:intron 40.0%
CACATCAAGCCAAACTTCAA+GGG - Chr8:72315886-72315905 MsG0880046352.01.T01:intron 40.0%
CAGTCTATGTTTACGTCTGT+TGG - Chr8:72316488-72316507 MsG0880046352.01.T01:intron 40.0%
CCATACAAATCCCCTTCTAT+CGG - Chr8:72317743-72317762 MsG0880046352.01.T01:intron 40.0%
CGACCCATTTAACCAAAAAC+TGG + Chr8:72313906-72313925 None:intergenic 40.0%
CTGTGTTCATGAAAGGACAA+AGG + Chr8:72316544-72316563 None:intergenic 40.0%
CTTACAGCTCATCAACATTC+GGG + Chr8:72317790-72317809 None:intergenic 40.0%
GAGAAAAGGAAGAGAGAATG+AGG + Chr8:72313730-72313749 None:intergenic 40.0%
GAGATGAAAGAGAGAGTGAT+TGG + Chr8:72313760-72313779 None:intergenic 40.0%
GCAACACCTTACTATTGGTA+GGG - Chr8:72317954-72317973 MsG0880046352.01.T01:intron 40.0%
GCTTACAGCTCATCAACATT+CGG + Chr8:72317791-72317810 None:intergenic 40.0%
GGAAAATCAAAACCCAAGAG+AGG + Chr8:72313885-72313904 None:intergenic 40.0%
GTAAATTTCACCCGAAGTGT+TGG - Chr8:72317370-72317389 MsG0880046352.01.T01:intron 40.0%
TATAGGCATTAAGAAGGTGG+TGG + Chr8:72318223-72318242 None:intergenic 40.0%
TCATGGCAACACCTTACTAT+TGG - Chr8:72317949-72317968 MsG0880046352.01.T01:intron 40.0%
TCATGTGCGAAAAATTCAGC+AGG - Chr8:72318183-72318202 MsG0880046352.01.T01:intron 40.0%
TGAGATGCAAATGAAGGACA+TGG + Chr8:72314889-72314908 None:intergenic 40.0%
TGATTGGGAGAAACGAGAAA+AGG + Chr8:72313744-72313763 None:intergenic 40.0%
TGCAGCATCCTTAATGATGA+AGG - Chr8:72318347-72318366 MsG0880046352.01.T01:intron 40.0%
TGGACGTCATTAACCAATCA+TGG - Chr8:72318047-72318066 MsG0880046352.01.T01:intron 40.0%
TGTTCACAAAGCCGATAGAA+GGG + Chr8:72317757-72317776 None:intergenic 40.0%
TGTTCCGATTCAGAGATCTA+TGG + Chr8:72313929-72313948 None:intergenic 40.0%
TTAATGTCAATTGCTGTCGG+TGG - Chr8:72316088-72316107 MsG0880046352.01.T01:intron 40.0%
TTAGCCCACAAAGATTCACA+TGG + Chr8:72315063-72315082 None:intergenic 40.0%
TTGTTCACAAAGCCGATAGA+AGG + Chr8:72317758-72317777 None:intergenic 40.0%
! ACCCTTTTAATGAATCCCCT+CGG - Chr8:72315999-72316018 MsG0880046352.01.T01:intron 40.0%
! CATGCTCACCTTTAACCTTT+TGG + Chr8:72318389-72318408 None:intergenic 40.0%
! CGAAGTGTCATGTCTTTCTT+TGG - Chr8:72314495-72314514 MsG0880046352.01.T01:intron 40.0%
! GCAGACAGTCATCTAGATTT+TGG - Chr8:72318614-72318633 MsG0880046352.01.T01:intron 40.0%
! TCCAGTGATGATGAAATTCC+TGG - Chr8:72318836-72318855 MsG0880046352.01.T01:five_prime_UTR 40.0%
!! ATTCACATGGCTCTGGTAAA+TGG + Chr8:72315050-72315069 None:intergenic 40.0%
!! CTAAATCATAGGAGTGTTGG+AGG + Chr8:72317292-72317311 None:intergenic 40.0%
!! CTGATGGTGGAATCATACTT+AGG + Chr8:72316914-72316933 None:intergenic 40.0%
!! GGATTACTGTAATGGATTCG+AGG + Chr8:72318533-72318552 None:intergenic 40.0%
!!! AGATTTTTTTCCCCTCCTCA+AGG - Chr8:72317463-72317482 MsG0880046352.01.T01:intron 40.0%
!!! GGTTGAACTTTTGATGGACT+TGG - Chr8:72316838-72316857 MsG0880046352.01.T01:intron 40.0%
ACAAAGGGGAACTAGCTGTA+TGG + Chr8:72316125-72316144 None:intergenic 45.0%
ACACTCTCTCTCCAACACTT+CGG + Chr8:72317384-72317403 None:intergenic 45.0%
ACAGACCCCTACCAATAGTA+AGG + Chr8:72317963-72317982 None:intergenic 45.0%
AGAAAACCCCCCTTGAAGTT+TGG + Chr8:72315898-72315917 None:intergenic 45.0%
AGCCGAGGGGATTCATTAAA+AGG + Chr8:72316004-72316023 None:intergenic 45.0%
ATCAAGCCAAACTTCAAGGG+GGG - Chr8:72315889-72315908 MsG0880046352.01.T01:intron 45.0%
ATGCCATGTCCCGCATAATA+AGG + Chr8:72316879-72316898 None:intergenic 45.0%
ATTCGAGGCAAGTAATGCAG+TGG + Chr8:72318518-72318537 None:intergenic 45.0%
ATTGCAGGCCTTTATGAAGG+TGG - Chr8:72317683-72317702 MsG0880046352.01.T01:intron 45.0%
CAAGTGAGGGTGGAAAATGA+AGG + Chr8:72313814-72313833 None:intergenic 45.0%
CACAAAGATTCACATGGCTC+TGG + Chr8:72315057-72315076 None:intergenic 45.0%
CAGAGCCATGTGAATCTTTG+TGG - Chr8:72315055-72315074 MsG0880046352.01.T01:intron 45.0%
CAGTTACCACACCAACAAAG+GGG + Chr8:72316139-72316158 None:intergenic 45.0%
CATCAAGCCAAACTTCAAGG+GGG - Chr8:72315888-72315907 MsG0880046352.01.T01:intron 45.0%
CATTTCATCCACTGCAGATC+TGG - Chr8:72318013-72318032 MsG0880046352.01.T01:intron 45.0%
CCGATAGAAGGGGATTTGTA+TGG + Chr8:72317746-72317765 None:intergenic 45.0%
CGAACATTGGACTCCATGAT+TGG + Chr8:72318063-72318082 None:intergenic 45.0%
CGGACTCACTGAATTCAATG+TGG - Chr8:72317145-72317164 MsG0880046352.01.T01:intron 45.0%
CTCAAGGACAAAAAGAGGAG+AGG - Chr8:72317479-72317498 MsG0880046352.01.T01:intron 45.0%
GACAGTTACCACACCAACAA+AGG + Chr8:72316141-72316160 None:intergenic 45.0%
GATCGATATTCGGCAAGTGA+GGG + Chr8:72313827-72313846 None:intergenic 45.0%
GATTCCTATCCTCGTGAAGA+AGG + Chr8:72316401-72316420 None:intergenic 45.0%
GCACATCAAGCCAAACTTCA+AGG - Chr8:72315885-72315904 MsG0880046352.01.T01:intron 45.0%
GCATGAAGTATAGCCTTTCC+CGG - Chr8:72315759-72315778 MsG0880046352.01.T01:intron 45.0%
GCCAGGAATTTCATCATCAC+TGG + Chr8:72318840-72318859 None:intergenic 45.0%
GCCGAGGGGATTCATTAAAA+GGG + Chr8:72316003-72316022 None:intergenic 45.0%
GGATCCAGACAAGACATCTA+TGG + Chr8:72314826-72314845 None:intergenic 45.0%
GGCAACACCTTACTATTGGT+AGG - Chr8:72317953-72317972 MsG0880046352.01.T01:intron 45.0%
GTCGCCATAGATCTCTGAAT+CGG - Chr8:72313922-72313941 MsG0880046352.01.T01:intron 45.0%
GTGTCCATAGATGTCTTGTC+TGG - Chr8:72314819-72314838 MsG0880046352.01.T01:intron 45.0%
GTTCACAAAGCCGATAGAAG+GGG + Chr8:72317756-72317775 None:intergenic 45.0%
GTTGGTGTGGTAACTGTCTA+AGG - Chr8:72316143-72316162 MsG0880046352.01.T01:intron 45.0%
TACAGCTAGTTCCCCTTTGT+TGG - Chr8:72316125-72316144 MsG0880046352.01.T01:intron 45.0%
TCCAAGCAAGAGACGAGAAA+TGG - Chr8:72315323-72315342 MsG0880046352.01.T01:CDS 45.0%
TCCAGACTCCACCTTCATAA+AGG + Chr8:72317694-72317713 None:intergenic 45.0%
TCCATTTCTCGTCTCTTGCT+TGG + Chr8:72315327-72315346 None:intergenic 45.0%
TGATCGATATTCGGCAAGTG+AGG + Chr8:72313828-72313847 None:intergenic 45.0%
TTCGAGGCAAGTAATGCAGT+GGG + Chr8:72318517-72318536 None:intergenic 45.0%
TTGTGAGCGGTATGCTAAGA+AGG - Chr8:72318742-72318761 MsG0880046352.01.T01:five_prime_UTR 45.0%
! AGATCACTAAGGGAGTATGC+CGG + Chr8:72315781-72315800 None:intergenic 45.0%
! CCTCTTTTTGTCCTTGAGGA+GGG + Chr8:72317477-72317496 None:intergenic 45.0%
! CTCTCCTCTTTTTGTCCTTG+AGG + Chr8:72317481-72317500 None:intergenic 45.0%
! CTCTTTTTGTCCTTGAGGAG+GGG + Chr8:72317476-72317495 None:intergenic 45.0%
! TCCTCTTTTTGTCCTTGAGG+AGG + Chr8:72317478-72317497 None:intergenic 45.0%
! TTTGGGGCTGTGTTCATGAA+AGG + Chr8:72316551-72316570 None:intergenic 45.0%
ACAGCTCATCAACATTCGGG+TGG + Chr8:72317787-72317806 None:intergenic 50.0%
AGATGTCACCCTTCTTCACG+AGG - Chr8:72316389-72316408 MsG0880046352.01.T01:intron 50.0%
ATACAGAGCCAGATCTGCAG+TGG + Chr8:72318024-72318043 None:intergenic 50.0%
CAAGTAATGCAGTGGGATCG+TGG + Chr8:72318510-72318529 None:intergenic 50.0%
CACTCTCTCTCCAACACTTC+GGG + Chr8:72317383-72317402 None:intergenic 50.0%
CAGTCGGTGGGATTCTATGT+TGG - Chr8:72313975-72313994 MsG0880046352.01.T01:intron 50.0%
CCATCGCCATTAAGGGTTTC+AGG - Chr8:72313784-72313803 MsG0880046352.01.T01:intron 50.0%
CCCTCCTCAAGGACAAAAAG+AGG - Chr8:72317474-72317493 MsG0880046352.01.T01:intron 50.0%
CCTGAAACCCTTAATGGCGA+TGG + Chr8:72313787-72313806 None:intergenic 50.0%
CGCGAGACCCACTAATTTAG+TGG + Chr8:72317351-72317370 None:intergenic 50.0%
CTAGTTCCCCTTTGTTGGTG+TGG - Chr8:72316130-72316149 MsG0880046352.01.T01:intron 50.0%
CTCAACGCCATCGCCATTAA+GGG - Chr8:72313777-72313796 MsG0880046352.01.T01:CDS 50.0%
GATGCTGCATCGCCATTCAA+AGG + Chr8:72318336-72318355 None:intergenic 50.0%
GCCTTTATGAAGGTGGAGTC+TGG - Chr8:72317690-72317709 MsG0880046352.01.T01:intron 50.0%
GGCTTGCCTGAAACCCTTAA+TGG + Chr8:72313793-72313812 None:intergenic 50.0%
TCACCCTTCTTCACGAGGAT+AGG - Chr8:72316394-72316413 MsG0880046352.01.T01:intron 50.0%
TCTCAACGCCATCGCCATTA+AGG - Chr8:72313776-72313795 MsG0880046352.01.T01:CDS 50.0%
TGTAACATGGGTCAGTCGGT+GGG - Chr8:72313963-72313982 MsG0880046352.01.T01:intron 50.0%
TTGTAACATGGGTCAGTCGG+TGG - Chr8:72313962-72313981 MsG0880046352.01.T01:intron 50.0%
! GATCACTAAGGGAGTATGCC+GGG + Chr8:72315780-72315799 None:intergenic 50.0%
! GGGTCTGTGCACATGGATTA+TGG - Chr8:72317975-72317994 MsG0880046352.01.T01:intron 50.0%
!! CAGATCTGGCTCTGTATGCT+TGG - Chr8:72318027-72318046 MsG0880046352.01.T01:intron 50.0%
!! TGGGGACAGAGTATTGTGAG+CGG - Chr8:72318729-72318748 MsG0880046352.01.T01:five_prime_UTR 50.0%
CGATATTCGGCAAGTGAGGG+TGG + Chr8:72313824-72313843 None:intergenic 55.0%
TAGGGGGTGACATAAGCCGA+GGG + Chr8:72316018-72316037 None:intergenic 55.0%
TTAGGGGGTGACATAAGCCG+AGG + Chr8:72316019-72316038 None:intergenic 55.0%
TTGGTAGGGGTCTGTGCACA+TGG - Chr8:72317968-72317987 MsG0880046352.01.T01:intron 55.0%
! CTAAGGGAGTATGCCGGGAA+AGG + Chr8:72315775-72315794 None:intergenic 55.0%
! TGATGACGAGGAGAGTGACG+AGG - Chr8:72318787-72318806 MsG0880046352.01.T01:five_prime_UTR 55.0%
! TGCCAGCATCGAACCTGAGT+CGG + Chr8:72316181-72316200 None:intergenic 55.0%
AGGGGGTGACATAAGCCGAG+GGG + Chr8:72316017-72316036 None:intergenic 60.0%
CTCGTCATCAGCTGTGCCGT+TGG + Chr8:72318777-72318796 None:intergenic 60.0%
TGACGAGGAGAGTGACGAGG+AGG - Chr8:72318790-72318809 MsG0880046352.01.T01:five_prime_UTR 60.0%
! CAACGGCACAGCTGATGACG+AGG - Chr8:72318775-72318794 MsG0880046352.01.T01:five_prime_UTR 60.0%
! GCCAGCATCGAACCTGAGTC+GGG + Chr8:72316180-72316199 None:intergenic 60.0%
GACACTGACCTGCCCGACTC+AGG - Chr8:72316165-72316184 MsG0880046352.01.T01:intron 65.0%
GCATCGAACCTGAGTCGGGC+AGG + Chr8:72316176-72316195 None:intergenic 65.0%
GCCCGACTCAGGTTCGATGC+TGG - Chr8:72316176-72316195 MsG0880046352.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 72313633 72318874 72313633 ID=MsG0880046352.01;Name=MsG0880046352.01
Chr8 mRNA 72313633 72318874 72313633 ID=MsG0880046352.01.T01;Parent=MsG0880046352.01;Name=MsG0880046352.01.T01;_AED=0.45;_eAED=0.50;_QI=202|0.57|0.62|1|0.42|0.5|8|0|232
Chr8 exon 72313633 72313798 72313633 ID=MsG0880046352.01.T01:exon:11435;Parent=MsG0880046352.01.T01
Chr8 exon 72313887 72313911 72313887 ID=MsG0880046352.01.T01:exon:11434;Parent=MsG0880046352.01.T01
Chr8 exon 72314087 72314302 72314087 ID=MsG0880046352.01.T01:exon:11433;Parent=MsG0880046352.01.T01
Chr8 exon 72314425 72314477 72314425 ID=MsG0880046352.01.T01:exon:11432;Parent=MsG0880046352.01.T01
Chr8 exon 72314703 72314817 72314703 ID=MsG0880046352.01.T01:exon:11431;Parent=MsG0880046352.01.T01
Chr8 exon 72315319 72315398 72315319 ID=MsG0880046352.01.T01:exon:11430;Parent=MsG0880046352.01.T01
Chr8 exon 72317149 72317221 72317149 ID=MsG0880046352.01.T01:exon:11429;Parent=MsG0880046352.01.T01
Chr8 exon 72318702 72318874 72318702 ID=MsG0880046352.01.T01:exon:11428;Parent=MsG0880046352.01.T01
Chr8 five_prime_UTR 72318702 72318874 72318702 ID=MsG0880046352.01.T01:five_prime_utr;Parent=MsG0880046352.01.T01
Chr8 five_prime_UTR 72317193 72317221 72317193 ID=MsG0880046352.01.T01:five_prime_utr;Parent=MsG0880046352.01.T01
Chr8 CDS 72317149 72317192 72317149 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72315319 72315398 72315319 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72314703 72314817 72314703 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72314425 72314477 72314425 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72314087 72314302 72314087 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72313887 72313911 72313887 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Chr8 CDS 72313633 72313798 72313633 ID=MsG0880046352.01.T01:cds;Parent=MsG0880046352.01.T01
Gene Sequence

>MsG0880046352.01.T01

ATGTCATCTCCAAGCAAGAGACGAGAAATGGATGTAATGAAATTGATGATGAGTGATTATACAGTGGAAACGATAAATGACGGACTCACTGAATTCAATGTGGAGTTTCATGGTCCAAAAGAAAGCCTTTATGAAGGTGGAGTCTGGAAAATTCGTGTTGAACTTCCTGATGCATATCCATACAAATCCCCTTCTATCGGCTTTGTGAACAAAATATACCACCCGAATGTTGATGAGCTATCTGGCTCTGTATGCTTGGACGTCATTAACCAATCATGGAGTCCAATGTTCGGATTTTATGGAATCTCCACCACCTTCTTAATGCCTATAGATATGACCAAGGTTTCTACTTTTTCAGATCTTCTAAATGTCTTTGAAGTTTTTCTTCCACAACTCTTGCTTTATCCAAATGCTTCAGATCCTTTGAATGGCGATGCAGCATCCTTAATGATGAAGGATAAAAAGCTGTATGACCAAAAGGTTAAAGGTGAGCATGTTTTTAGTTATGAATGGATTAATATCTTGGGCAGACATTTTTGTACTGTGGTATTTGTGGGGACAGAGTATTGTGAGCGGTATGCTAAGAAGGAACACATTACCAACGGCACAGCTGATGACGAGGAGAGTGACGAGGAGGACATCAGTGAAGCTGAAACTCAATCCAGTGATGATGAAATTCCTGGCCGTGCTGATCTTTAA
Protein sequence

>MsG0880046352.01.T01

MSSPSKRREMDVMKLMMSDYTVETINDGLTEFNVEFHGPKESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDELSGSVCLDVINQSWSPMFGFYGISTTFLMPIDMTKVSTFSDLLNVFEVFLPQLLLYPNASDPLNGDAASLMMKDKKLYDQKVKGEHVFSYEWINILGRHFCTVVFVGTEYCERYAKKEHITNGTADDEESDEEDISEAETQSSDDEIPGRADL*