AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046410.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046410.01.T01 MTR_4g107610 93.245 607 15 1 1 581 1 607 0.0 1161
MsG0880046410.01.T01 MTR_7g064800 48.167 600 265 7 5 571 1 587 0.0 545
MsG0880046410.01.T01 MTR_7g064780 48.000 575 263 6 25 567 20 590 0.0 545
MsG0880046410.01.T01 MTR_5g038060 39.967 608 320 11 2 573 4 602 5.44e-152 450
MsG0880046410.01.T01 MTR_4g107530 40.070 574 292 8 5 533 2 568 3.12e-148 440
MsG0880046410.01.T01 MTR_4g107580 39.580 571 300 8 18 549 12 576 1.52e-144 431
MsG0880046410.01.T01 MTR_4g107510 39.234 548 290 7 34 543 39 581 6.62e-138 414
MsG0880046410.01.T01 MTR_8g469480 39.602 553 287 9 34 547 41 585 2.05e-136 410
MsG0880046410.01.T01 MTR_5g038190 35.536 560 325 7 17 543 9 565 2.15e-125 381
MsG0880046410.01.T01 MTR_8g469470 35.889 574 326 8 16 551 17 586 8.57e-120 367
MsG0880046410.01.T01 MTR_8g103233 33.221 593 345 13 15 571 1 578 3.25e-105 328
MsG0880046410.01.T01 MTR_5g055000 32.582 577 339 8 28 570 15 575 2.16e-104 327
MsG0880046410.01.T01 MTR_1g009200 35.237 613 328 13 8 581 4 586 8.11e-103 323
MsG0880046410.01.T01 MTR_7g088825 32.923 568 335 9 24 555 15 572 5.37e-102 321
MsG0880046410.01.T01 MTR_7g067010 33.798 574 330 11 2 543 3 558 2.63e-101 318
MsG0880046410.01.T01 MTR_7g088820 32.496 597 347 12 17 574 11 590 4.91e-100 316
MsG0880046410.01.T01 MTR_4g015080 34.358 553 317 11 25 543 28 568 1.01e-99 314
MsG0880046410.01.T01 MTR_2g101650 32.986 576 340 12 16 556 10 574 3.21e-99 313
MsG0880046410.01.T01 MTR_7g088790 32.253 586 341 11 24 572 22 588 4.43e-98 311
MsG0880046410.01.T01 MTR_1g026770 31.934 548 330 8 29 543 13 550 5.06e-98 310
MsG0880046410.01.T01 MTR_1g026750 31.937 573 335 9 33 573 20 569 1.57e-97 308
MsG0880046410.01.T01 MTR_1g026740 31.004 558 342 9 18 543 7 553 2.80e-97 308
MsG0880046410.01.T01 MTR_7g098200 31.648 613 363 10 3 577 6 600 3.41e-97 308
MsG0880046410.01.T01 MTR_3g462710 33.217 575 334 12 2 543 3 560 1.98e-96 305
MsG0880046410.01.T01 MTR_7g098200 31.803 610 356 10 3 577 6 590 2.37e-96 306
MsG0880046410.01.T01 MTR_2g101640 31.153 581 355 9 25 572 17 585 2.58e-96 307
MsG0880046410.01.T01 MTR_4g011280 29.721 609 381 12 1 570 1 601 2.62e-94 301
MsG0880046410.01.T01 MTR_4g019580 33.449 577 339 11 1 543 1 566 3.94e-94 300
MsG0880046410.01.T01 MTR_7g065080 33.886 543 323 10 33 552 33 562 9.67e-93 296
MsG0880046410.01.T01 MTR_3g069500 32.336 535 328 9 31 543 35 557 1.34e-91 293
MsG0880046410.01.T01 MTR_3g112450 33.333 549 328 10 27 549 19 555 2.23e-91 292
MsG0880046410.01.T01 MTR_3g112460 31.712 555 339 11 27 555 19 559 2.51e-91 292
MsG0880046410.01.T01 MTR_7g088820 33.147 537 305 11 76 574 8 528 5.27e-91 290
MsG0880046410.01.T01 MTR_3g069420 33.916 572 324 12 33 571 36 586 1.23e-89 288
MsG0880046410.01.T01 MTR_7g098180 32.472 542 318 7 31 536 31 560 1.27e-89 289
MsG0880046410.01.T01 MTR_3g112470 31.351 555 341 10 27 555 19 559 2.35e-89 287
MsG0880046410.01.T01 MTR_7g098160 30.809 581 349 9 31 569 33 602 4.85e-89 287
MsG0880046410.01.T01 MTR_2g101590 31.900 558 337 10 14 536 9 558 7.13e-89 288
MsG0880046410.01.T01 MTR_3g069440 31.810 547 325 11 31 543 33 565 5.43e-88 284
MsG0880046410.01.T01 MTR_7g065080 35.391 486 278 10 90 552 3 475 7.68e-87 278
MsG0880046410.01.T01 MTR_2g101610 31.598 557 332 11 18 536 14 559 1.46e-86 281
MsG0880046410.01.T01 MTR_1g075440 32.305 551 322 8 31 544 28 564 1.74e-86 280
MsG0880046410.01.T01 MTR_7g098230 31.408 554 324 11 40 554 35 571 2.74e-86 280
MsG0880046410.01.T01 MTR_7g098040 30.530 547 335 7 31 543 34 569 1.98e-83 273
MsG0880046410.01.T01 MTR_5g012270 31.272 566 341 10 27 555 25 579 5.88e-83 271
MsG0880046410.01.T01 MTR_1g041875 31.284 553 338 9 1 526 3 540 4.83e-82 268
MsG0880046410.01.T01 MTR_7g098090 30.034 586 352 10 31 569 33 607 2.46e-81 267
MsG0880046410.01.T01 MTR_1g042310 30.473 571 343 11 1 536 3 554 2.46e-81 266
MsG0880046410.01.T01 MTR_7g088820 33.199 497 276 12 117 574 1 480 2.47e-81 263
MsG0880046410.01.T01 MTR_1g057460 30.093 535 326 10 30 536 43 557 6.25e-81 265
MsG0880046410.01.T01 MTR_1g041835 30.969 578 349 9 1 544 1 562 1.11e-80 265
MsG0880046410.01.T01 MTR_3g014790 31.076 576 319 12 34 565 20 561 2.46e-80 263
MsG0880046410.01.T01 MTR_2g093640 30.144 554 336 7 26 543 6 544 2.59e-80 263
MsG0880046410.01.T01 MTR_2g101560 31.070 589 355 12 18 567 14 590 3.89e-80 265
MsG0880046410.01.T01 MTR_1g041815 30.690 580 348 10 1 544 1 562 4.42e-80 263
MsG0880046410.01.T01 MTR_4g033325 30.880 557 322 8 27 550 27 553 8.04e-80 261
MsG0880046410.01.T01 MTR_2g093160 30.576 556 331 9 26 543 6 544 2.04e-79 260
MsG0880046410.01.T01 MTR_7g098220 30.810 568 342 9 31 560 30 584 2.18e-79 261
MsG0880046410.01.T01 MTR_3g005010 30.727 550 307 10 31 544 30 541 3.88e-79 259
MsG0880046410.01.T01 MTR_2g093180 31.712 555 327 7 26 543 6 545 4.79e-79 259
MsG0880046410.01.T01 MTR_7g098200 31.515 495 290 8 120 577 4 486 1.55e-77 254
MsG0880046410.01.T01 MTR_1g042310 30.989 526 316 9 46 536 4 517 2.30e-76 253
MsG0880046410.01.T01 MTR_1g041885 31.610 503 308 7 50 526 1 493 2.32e-76 252
MsG0880046410.01.T01 MTR_5g014150 28.162 593 381 10 2 557 16 600 2.70e-76 254
MsG0880046410.01.T01 MTR_1g085090 30.000 580 348 12 30 573 18 575 1.23e-75 252
MsG0880046410.01.T01 MTR_3g462710 34.136 457 259 11 120 543 4 451 2.55e-75 247
MsG0880046410.01.T01 MTR_7g098220 30.797 552 331 9 47 560 2 540 2.19e-74 247
MsG0880046410.01.T01 MTR_3g072300 28.621 573 362 9 27 565 20 579 3.42e-74 248
MsG0880046410.01.T01 MTR_1g042310 30.843 522 314 9 50 536 1 510 5.37e-74 246
MsG0880046410.01.T01 MTR_4g033315 29.570 558 330 9 25 548 25 553 9.29e-74 246
MsG0880046410.01.T01 MTR_4g033310 29.570 558 330 9 25 548 25 553 9.29e-74 246
MsG0880046410.01.T01 MTR_4g101380 31.459 569 343 11 25 555 21 580 1.48e-73 246
MsG0880046410.01.T01 MTR_0294s0020 29.281 584 345 10 2 550 3 553 1.79e-73 245
MsG0880046410.01.T01 MTR_1g057460 29.842 506 307 10 59 536 1 486 2.16e-73 243
MsG0880046410.01.T01 MTR_4g114340 28.938 584 363 10 17 569 13 575 8.27e-73 244
MsG0880046410.01.T01 MTR_7g111260 30.137 584 351 14 18 563 6 570 1.17e-72 243
MsG0880046410.01.T01 MTR_0236s0050 30.830 506 302 11 59 536 1 486 1.53e-72 241
MsG0880046410.01.T01 MTR_2g005130 29.329 566 350 11 2 543 21 560 6.11e-72 242
MsG0880046410.01.T01 MTR_8g038880 31.148 549 307 10 28 533 17 537 4.40e-71 239
MsG0880046410.01.T01 MTR_5g038380 29.610 564 332 9 33 548 30 576 6.22e-71 239
MsG0880046410.01.T01 MTR_5g085850 31.784 538 326 9 25 536 24 546 8.54e-71 239
MsG0880046410.01.T01 MTR_7g098150 32.143 420 271 5 31 446 33 442 3.97e-70 234
MsG0880046410.01.T01 MTR_4g033330 29.887 532 310 9 31 528 31 533 4.27e-70 235
MsG0880046410.01.T01 MTR_4g098800 28.196 571 369 9 2 541 8 568 4.81e-70 237
MsG0880046410.01.T01 MTR_7g006540 28.645 583 357 12 31 569 63 630 5.36e-70 238
MsG0880046410.01.T01 MTR_4g098800 28.520 554 357 8 14 536 85 630 3.29e-69 236
MsG0880046410.01.T01 MTR_2g017750 27.648 557 350 11 33 543 36 585 3.88e-69 234
MsG0880046410.01.T01 MTR_5g012290 28.746 574 358 12 18 554 17 576 7.42e-68 231
MsG0880046410.01.T01 MTR_1g116930 27.556 577 368 12 24 572 16 570 3.19e-67 229
MsG0880046410.01.T01 MTR_7g005930 26.555 595 390 11 1 558 1 585 5.59e-66 226
MsG0880046410.01.T01 MTR_8g469310 29.636 550 347 8 33 547 28 572 1.46e-65 224
MsG0880046410.01.T01 MTR_3g100980 28.497 579 346 11 30 569 15 564 2.50e-65 223
MsG0880046410.01.T01 MTR_4g033395 30.242 496 285 8 25 486 26 494 4.83e-65 221
MsG0880046410.01.T01 MTR_4g107670 28.700 554 341 11 33 543 26 568 2.30e-64 221
MsG0880046410.01.T01 MTR_7g010820 28.980 559 346 11 5 523 1 548 8.05e-64 220
MsG0880046410.01.T01 MTR_4g033325 31.034 435 249 6 149 550 13 429 1.05e-63 216
MsG0880046410.01.T01 MTR_4g033325 31.034 435 249 6 149 550 39 455 1.45e-63 216
MsG0880046410.01.T01 MTR_4g033375 30.101 495 287 7 25 486 26 494 3.99e-63 216
MsG0880046410.01.T01 MTR_4g123537 28.417 556 351 9 16 543 31 567 3.57e-61 213
MsG0880046410.01.T01 MTR_3g100980 27.183 607 346 12 30 569 15 592 1.82e-59 208
MsG0880046410.01.T01 MTR_4g033385 29.655 435 258 6 149 550 37 456 2.71e-59 204
MsG0880046410.01.T01 MTR_7g013270 26.165 558 371 10 17 543 76 623 3.69e-57 203
MsG0880046410.01.T01 MTR_8g087810 28.179 582 360 12 26 563 16 583 7.11e-57 201
MsG0880046410.01.T01 MTR_8g087780 27.580 533 342 8 26 517 16 545 8.91e-57 201
MsG0880046410.01.T01 MTR_7g098210 27.088 491 238 11 86 536 22 432 9.70e-47 170
MsG0880046410.01.T01 MTR_7g052600 26.950 564 338 13 15 543 1 525 1.95e-46 171
MsG0880046410.01.T01 MTR_7g051880 27.163 497 292 11 76 543 70 525 4.04e-45 167
MsG0880046410.01.T01 MTR_6g008690 26.594 549 311 14 48 543 24 533 7.02e-44 164
MsG0880046410.01.T01 MTR_7g051830 26.433 541 340 11 26 543 20 525 2.24e-42 160
MsG0880046410.01.T01 MTR_1g009170 29.024 410 195 11 155 525 5 357 5.80e-40 150
MsG0880046410.01.T01 MTR_4g024930 25.483 569 369 14 2 543 12 552 1.49e-37 147
MsG0880046410.01.T01 MTR_7g064160 54.945 91 41 0 25 115 23 113 3.56e-28 109
MsG0880046410.01.T01 MTR_4g033310 24.638 345 206 7 241 548 162 489 8.67e-27 114
MsG0880046410.01.T01 MTR_4g033310 35.912 181 104 2 25 205 25 193 1.22e-24 107
MsG0880046410.01.T01 MTR_8g091265 39.815 108 62 3 301 406 3 109 7.75e-18 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046410.01.T01 AT5G28470 53.819 563 226 8 15 548 1 558 0.0 618
MsG0880046410.01.T01 AT5G28470 53.464 563 226 8 15 548 1 556 0.0 610
MsG0880046410.01.T01 AT1G69870 40.531 565 297 7 26 556 46 605 1.30e-151 449
MsG0880046410.01.T01 AT1G27080 40.845 568 302 9 29 568 12 573 4.44e-146 434
MsG0880046410.01.T01 AT1G27080 40.858 536 283 9 61 568 2 531 9.86e-134 401
MsG0880046410.01.T01 AT5G62680 37.184 554 306 6 34 549 46 595 8.29e-130 394
MsG0880046410.01.T01 AT1G18880 36.964 560 309 7 17 536 1 556 2.49e-129 391
MsG0880046410.01.T01 AT3G47960 35.158 603 345 8 12 574 40 636 1.89e-126 385
MsG0880046410.01.T01 AT1G69860 36.803 538 308 8 30 543 17 546 2.07e-114 352
MsG0880046410.01.T01 AT1G52190 32.781 604 356 13 16 575 7 604 1.19e-112 349
MsG0880046410.01.T01 AT3G16180 33.445 598 343 12 11 567 3 586 4.41e-109 339
MsG0880046410.01.T01 AT3G54140 33.622 577 332 12 1 543 1 560 5.79e-107 333
MsG0880046410.01.T01 AT3G54140 33.622 577 332 12 1 543 1 560 5.79e-107 333
MsG0880046410.01.T01 AT5G01180 32.696 575 337 12 3 543 2 560 1.01e-98 311
MsG0880046410.01.T01 AT5G01180 32.696 575 337 12 3 543 2 560 1.01e-98 311
MsG0880046410.01.T01 AT5G01180 32.696 575 337 12 3 543 2 560 1.01e-98 311
MsG0880046410.01.T01 AT1G62200 35.634 536 309 9 25 532 46 573 3.29e-95 303
MsG0880046410.01.T01 AT2G02040 33.453 559 317 13 25 543 35 578 7.74e-95 302
MsG0880046410.01.T01 AT1G68570 32.977 561 338 6 29 555 21 577 3.24e-93 298
MsG0880046410.01.T01 AT1G68570 33.094 556 333 7 43 564 5 555 3.51e-90 289
MsG0880046410.01.T01 AT2G37900 32.027 587 352 11 1 557 1 570 4.87e-90 289
MsG0880046410.01.T01 AT1G62200 33.805 565 309 10 25 532 46 602 5.73e-89 288
MsG0880046410.01.T01 AT1G62200 33.805 565 309 10 25 532 60 616 5.74e-89 288
MsG0880046410.01.T01 AT3G53960 32.534 584 339 14 1 543 1 570 4.90e-86 279
MsG0880046410.01.T01 AT3G54450 30.700 557 321 9 28 544 9 540 2.50e-84 273
MsG0880046410.01.T01 AT5G46050 31.362 558 332 8 3 526 4 544 8.56e-84 273
MsG0880046410.01.T01 AT3G45660 29.949 591 358 11 1 561 12 576 3.26e-83 271
MsG0880046410.01.T01 AT3G45660 30.662 574 342 11 18 561 8 555 3.28e-83 271
MsG0880046410.01.T01 AT3G45660 30.662 574 342 11 18 561 8 555 3.28e-83 271
MsG0880046410.01.T01 AT3G45680 29.537 562 354 9 18 556 8 550 1.38e-82 269
MsG0880046410.01.T01 AT1G59740 31.009 545 340 7 23 540 36 571 4.20e-82 269
MsG0880046410.01.T01 AT2G37900 33.002 503 297 10 78 557 6 491 2.04e-81 264
MsG0880046410.01.T01 AT3G45650 31.100 582 344 12 10 561 2 556 3.26e-81 265
MsG0880046410.01.T01 AT3G45690 29.964 554 344 11 17 570 5 514 4.54e-81 264
MsG0880046410.01.T01 AT1G22550 30.690 580 337 11 2 544 6 557 5.03e-81 265
MsG0880046410.01.T01 AT2G02020 30.797 552 302 10 25 543 36 540 1.21e-80 263
MsG0880046410.01.T01 AT2G26690 31.393 567 348 10 17 554 13 567 2.39e-80 264
MsG0880046410.01.T01 AT1G33440 31.919 542 324 9 33 543 40 567 1.36e-79 262
MsG0880046410.01.T01 AT3G45720 30.347 547 339 8 33 556 21 548 2.99e-79 260
MsG0880046410.01.T01 AT3G45700 29.754 568 339 11 29 572 14 545 2.92e-77 254
MsG0880046410.01.T01 AT5G46040 29.821 560 338 10 3 526 4 544 1.20e-76 254
MsG0880046410.01.T01 AT2G26690 31.978 541 330 9 43 554 3 534 3.06e-76 252
MsG0880046410.01.T01 AT3G21670 30.864 567 352 9 5 543 1 555 6.64e-76 252
MsG0880046410.01.T01 AT1G22540 31.171 555 317 11 17 535 19 544 3.00e-75 249
MsG0880046410.01.T01 AT2G40460 29.813 587 351 12 1 552 1 561 7.33e-75 249
MsG0880046410.01.T01 AT2G26690 31.827 531 324 9 53 554 1 522 1.96e-73 244
MsG0880046410.01.T01 AT3G45650 29.900 602 351 13 10 561 2 582 1.33e-72 243
MsG0880046410.01.T01 AT1G22570 30.055 549 314 13 17 524 19 538 1.37e-72 243
MsG0880046410.01.T01 AT1G72125 28.693 589 344 10 8 550 2 560 1.70e-71 240
MsG0880046410.01.T01 AT1G12110 30.598 585 348 13 27 574 23 586 2.57e-71 240
MsG0880046410.01.T01 AT1G69850 30.411 559 332 9 33 543 27 576 2.81e-71 240
MsG0880046410.01.T01 AT3G45710 28.421 570 351 12 29 572 19 557 6.94e-71 238
MsG0880046410.01.T01 AT1G72140 30.195 563 311 13 23 544 29 550 1.67e-70 237
MsG0880046410.01.T01 AT5G13400 28.929 560 344 10 27 543 60 608 7.25e-70 237
MsG0880046410.01.T01 AT1G72130 29.837 553 317 10 26 546 20 533 5.94e-69 233
MsG0880046410.01.T01 AT1G32450 26.891 595 387 8 17 573 26 610 3.71e-68 232
MsG0880046410.01.T01 AT4G21680 27.473 546 358 8 25 536 22 563 4.07e-67 229
MsG0880046410.01.T01 AT5G46050 32.207 444 255 7 117 526 1 432 7.99e-66 222
MsG0880046410.01.T01 AT1G27040 30.270 555 335 11 25 543 20 558 1.48e-65 224
MsG0880046410.01.T01 AT1G27040 30.270 555 335 11 25 543 16 554 1.61e-65 224
MsG0880046410.01.T01 AT2G02020 28.675 551 294 11 25 543 36 519 2.75e-65 222
MsG0880046410.01.T01 AT1G22570 29.580 524 302 12 42 524 4 501 4.70e-65 222
MsG0880046410.01.T01 AT1G72120 27.993 568 344 9 17 549 18 555 7.88e-65 222
MsG0880046410.01.T01 AT5G19640 27.434 565 346 11 33 569 61 589 8.25e-64 220
MsG0880046410.01.T01 AT1G27040 30.524 534 320 10 45 543 9 526 2.33e-63 218
MsG0880046410.01.T01 AT5G62730 28.036 560 339 8 24 544 49 583 2.08e-60 211
MsG0880046410.01.T01 AT5G62730 27.971 547 330 8 37 544 3 524 3.09e-59 206
MsG0880046410.01.T01 AT3G25260 28.159 554 330 12 15 543 5 515 5.87e-59 205
MsG0880046410.01.T01 AT1G72130 30.068 439 249 8 140 546 3 415 1.14e-53 188
MsG0880046410.01.T01 AT1G72130 30.068 439 249 8 140 546 3 415 1.14e-53 188
MsG0880046410.01.T01 AT5G14940 26.834 559 338 12 30 543 6 538 1.64e-51 186
MsG0880046410.01.T01 AT3G25280 25.179 560 345 12 16 543 4 521 8.76e-50 180
MsG0880046410.01.T01 AT3G01350 25.436 574 353 11 36 557 12 562 3.22e-43 163
MsG0880046410.01.T01 AT5G11570 24.340 530 298 14 34 536 16 469 3.14e-41 155
MsG0880046410.01.T01 AT2G38100 24.220 545 330 20 59 561 2 505 1.93e-20 95.1
MsG0880046410.01.T01 AT2G38100 24.220 545 330 20 59 561 18 521 3.34e-20 94.7
MsG0880046410.01.T01 AT2G38100 24.220 545 330 20 59 561 24 527 4.32e-20 94.4

Find 133 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGACATCACTTTCATTT+TGG 0.133929 8:-73088958 MsG0880046410.01.T01:CDS
ATGAACAATGTTGACAATTA+AGG 0.178336 8:+73088581 None:intergenic
TCAATAATCATCTTTCTATT+TGG 0.182828 8:-73089421 MsG0880046410.01.T01:CDS
TAATGAGTCATTTGAGAAAT+TGG 0.224444 8:-73090882 MsG0880046410.01.T01:CDS
GAGTCTATGAGGACGGTTTC+TGG 0.227131 8:-73088648 MsG0880046410.01.T01:CDS
TAATGAGGATAATCAATAAA+AGG 0.244344 8:-73088904 MsG0880046410.01.T01:CDS
AATTAGAGAGCTTCTTTAAT+TGG 0.245054 8:-73089558 MsG0880046410.01.T01:CDS
CAGCTAGGAGTTCTATTTAC+AGG 0.245288 8:-73089679 MsG0880046410.01.T01:CDS
CTTTGCTGCTGTTGCTATAA+TGG 0.251616 8:-73088694 MsG0880046410.01.T01:CDS
TTATTGATTATCCTCATTAT+AGG 0.258228 8:+73088908 None:intergenic
ACTCCTAGCTGCCAATCTTT+TGG 0.277033 8:+73089691 None:intergenic
CCATTGGTGCTGGTGGAATT+AGG 0.281293 8:-73089642 MsG0880046410.01.T01:CDS
TGGTTAATGTGGTGCAAATT+TGG 0.285525 8:-73090790 MsG0880046410.01.T01:CDS
TTCATTTCTGATACTTATCT+TGG 0.291357 8:-73090731 MsG0880046410.01.T01:CDS
ACTAATGTAAGCTGGACTTT+AGG 0.309412 8:-73089475 MsG0880046410.01.T01:CDS
AGATGATGAGGAGAAGGTTT+TGG 0.315813 8:-73088343 MsG0880046410.01.T01:CDS
TCTCCATCCTCCTGCTTCTC+TGG 0.322425 8:+73091035 None:intergenic
ATACTTATCTTGGCCGGTTC+CGG 0.323101 8:-73090721 MsG0880046410.01.T01:CDS
GGAGTTCTATTTACAGGTCT+TGG 0.337419 8:-73089673 MsG0880046410.01.T01:CDS
CTGGATGAAGCTTCATTAGA+TGG 0.345535 8:+73091054 None:intergenic
CCTTGCCACTTATCAAATAA+TGG 0.347378 8:+73088424 None:intergenic
ATACAAACTGATAGGTCTAT+TGG 0.348540 8:-73089022 MsG0880046410.01.T01:CDS
TGTTTGGAATTCTACCAGTA+TGG 0.351509 8:-73089108 MsG0880046410.01.T01:CDS
GAACACTTGAAATGCTTGTT+TGG 0.353749 8:-73089124 MsG0880046410.01.T01:CDS
TGGTTGTATTGCATCACTTC+TGG 0.357555 8:-73090687 MsG0880046410.01.T01:intron
AATTTGTTGTTTCATTGTAA+TGG 0.359726 8:-73089077 MsG0880046410.01.T01:CDS
CGGTTCCGGACCCTCCTATA+TGG 0.362580 8:-73090707 MsG0880046410.01.T01:CDS
TGTCAGAATCAGAAAACATT+AGG 0.363031 8:-73089267 MsG0880046410.01.T01:CDS
TTGCTGTGTTGGTGTCAAAT+TGG 0.373081 8:+73089593 None:intergenic
CATAAAGCAACATCACATAA+AGG 0.375246 8:-73088561 MsG0880046410.01.T01:CDS
ATGGATCAGCAGAGCACATT+TGG 0.375422 8:-73089058 MsG0880046410.01.T01:CDS
ATCATTATCATCACAGGTAA+TGG 0.377106 8:+73089732 None:intergenic
CAGGTTCAAGTTTCTTGATA+AGG 0.377319 8:-73089230 MsG0880046410.01.T01:CDS
AGGCCTTGCAACATTGCATT+TGG 0.382877 8:-73089622 MsG0880046410.01.T01:CDS
CAAATTCCTGTCACCCATAC+TGG 0.392266 8:+73089094 None:intergenic
ATGGGATGCAGAATCAGAAT+TGG 0.395520 8:-73088863 MsG0880046410.01.T01:CDS
CAACCTATTGCTAGTGTTAA+GGG 0.401998 8:-73088381 MsG0880046410.01.T01:CDS
ATGGCAATGCCTCATGTTCT+AGG 0.403384 8:+73091073 None:intergenic
TCTCCCTTAACACTAGCAAT+AGG 0.405837 8:+73088378 None:intergenic
GCAACCTATTGCTAGTGTTA+AGG 0.408220 8:-73088382 MsG0880046410.01.T01:CDS
GCTTGCCATTATTTGATAAG+TGG 0.417301 8:-73088429 MsG0880046410.01.T01:CDS
GTTGTTCAATTCACTTGGTT+CGG 0.422826 8:+73089195 None:intergenic
CCATGGTTGTTCAATTCACT+TGG 0.424403 8:+73089190 None:intergenic
TATTATTTAATTGCTTCCAT+TGG 0.430317 8:-73088483 MsG0880046410.01.T01:CDS
TCAAACATTGCATCATTAGT+TGG 0.432144 8:-73090758 MsG0880046410.01.T01:CDS
TGTTCTAGGTCGAGTGTAGA+AGG 0.441355 8:+73091087 None:intergenic
CATATAGGAGGGTCCGGAAC+CGG 0.441581 8:+73090708 None:intergenic
TTAGGCTTGTTCAGACAAAC+AGG 0.442906 8:-73089249 MsG0880046410.01.T01:CDS
TCATTATCATCACAGGTAAT+GGG 0.445502 8:+73089733 None:intergenic
ATTGTCAACATCCAAAAGAT+TGG 0.446015 8:-73089702 MsG0880046410.01.T01:CDS
CATCCAAAAGATTGGCAGCT+AGG 0.450802 8:-73089694 MsG0880046410.01.T01:CDS
GCACTTGTTATTGTGCTCAC+TGG 0.451716 8:-73089514 MsG0880046410.01.T01:CDS
GTCTATTGGATCTCACTTCA+AGG 0.458738 8:-73089008 MsG0880046410.01.T01:CDS
ATAAAGCAACATCACATAAA+GGG 0.462265 8:-73088560 MsG0880046410.01.T01:CDS
AACTAATGATGCAATGTTTG+AGG 0.462398 8:+73090760 None:intergenic
TTTGACACCAACACAGCAAA+AGG 0.467559 8:-73089589 MsG0880046410.01.T01:CDS
CAACCTGAGTGGAATATTTG+TGG 0.471616 8:-73090810 MsG0880046410.01.T01:CDS
AATGAGGATAATCAATAAAA+GGG 0.479132 8:-73088903 MsG0880046410.01.T01:CDS
TTGTCCATTGCAAACTACTC+TGG 0.481684 8:-73088606 MsG0880046410.01.T01:CDS
TAGAGAGCTTCTTTAATTGG+TGG 0.485786 8:-73089555 MsG0880046410.01.T01:CDS
GTGATGCAATACAACCATAT+AGG 0.488324 8:+73090693 None:intergenic
GGACTATTATCCATTGGTGC+TGG 0.494849 8:-73089652 MsG0880046410.01.T01:CDS
AGATCTGTTAAATATATCAT+TGG 0.495983 8:-73091015 MsG0880046410.01.T01:intron
TACAACCATATAGGAGGGTC+CGG 0.500785 8:+73090702 None:intergenic
CATTATAGCAACAGCAGCAA+AGG 0.502153 8:+73088695 None:intergenic
AACCATGGAATTGCTAAGAA+TGG 0.505145 8:-73089175 MsG0880046410.01.T01:CDS
GAAGCTTCATCCAGAGAAGC+AGG 0.505889 8:-73091045 MsG0880046410.01.T01:CDS
GTCAAGATTTAAATCATACT+AGG 0.509763 8:-73088518 MsG0880046410.01.T01:CDS
TGGGATGCAGAATCAGAATT+GGG 0.510086 8:-73088862 MsG0880046410.01.T01:CDS
CCTAATTCCACCAGCACCAA+TGG 0.510559 8:+73089642 None:intergenic
ATATTCAAACTAATGTAAGC+TGG 0.511736 8:-73089483 MsG0880046410.01.T01:CDS
AAAGGGAAAACACCTTGGTT+AGG 0.511814 8:-73088543 MsG0880046410.01.T01:CDS
AACCATTCTTAGCAATTCCA+TGG 0.513777 8:+73089173 None:intergenic
ATTCTACCAGTATGGGTGAC+AGG 0.516346 8:-73089100 MsG0880046410.01.T01:CDS
GTTATCTATCCTATGTATGT+TGG 0.519802 8:-73088834 MsG0880046410.01.T01:CDS
TACATTTACAAGAAACCTCA+AGG 0.527921 8:-73089388 MsG0880046410.01.T01:CDS
ACTTTGTAGTTTGCAACAAG+TGG 0.530470 8:-73089146 MsG0880046410.01.T01:CDS
ACTTGGTAGGCACTAGATGA+AGG 0.530651 8:-73088320 None:intergenic
GAGAAAATTCAAAACTCCAA+TGG 0.531965 8:+73088467 None:intergenic
TGGAATATTTGTGGTTAATG+TGG 0.535275 8:-73090801 MsG0880046410.01.T01:CDS
GGTCTTGGACTATTATCCAT+TGG 0.538384 8:-73089658 MsG0880046410.01.T01:CDS
CTATTATCCATTGGTGCTGG+TGG 0.538784 8:-73089649 MsG0880046410.01.T01:CDS
CCATTATTTGATAAGTGGCA+AGG 0.539288 8:-73088424 MsG0880046410.01.T01:CDS
GTTTGGAATTCTACCAGTAT+GGG 0.540324 8:-73089107 MsG0880046410.01.T01:CDS
TGCAAGTGCCAGAGTCTATG+AGG 0.543102 8:-73088659 MsG0880046410.01.T01:CDS
ATGGAATTGCTAAGAATGGT+TGG 0.544020 8:-73089171 MsG0880046410.01.T01:CDS
TCTCACTTCAAGGTTCCACC+AGG 0.546207 8:-73088998 MsG0880046410.01.T01:CDS
TTTCTGATACTTATCTTGGC+CGG 0.550033 8:-73090727 MsG0880046410.01.T01:CDS
CATCCAGAGAAGCAGGAGGA+TGG 0.553260 8:-73091038 MsG0880046410.01.T01:CDS
AGGTCTATCATTATCATCAC+AGG 0.553890 8:+73089726 None:intergenic
GGCTACAAGAAGAATGAGCA+TGG 0.556808 8:-73088882 MsG0880046410.01.T01:CDS
GTATCTACCTTCCTATAATG+AGG 0.561820 8:-73088919 MsG0880046410.01.T01:CDS
AATGTGGTGCAAATTTGGAA+TGG 0.564294 8:-73090785 MsG0880046410.01.T01:CDS
ACACCAACACAGCAAAAGGA+AGG 0.566907 8:-73089585 MsG0880046410.01.T01:CDS
CATAGACTCTGGCACTTGCA+AGG 0.569044 8:+73088662 None:intergenic
ATGCAATACAACCATATAGG+AGG 0.569522 8:+73090696 None:intergenic
GGAACCAGAGTAGTTTGCAA+TGG 0.569691 8:+73088602 None:intergenic
TGAACAAGATGATGAGGAGA+AGG 0.569754 8:-73088349 MsG0880046410.01.T01:CDS
CACATAAAGGGAAAACACCT+TGG 0.572816 8:-73088548 MsG0880046410.01.T01:CDS
CTGCAGCTACCAACATACAT+AGG 0.573320 8:+73088825 None:intergenic
GGGAAAACACCTTGGTTAGG+TGG 0.573815 8:-73088540 MsG0880046410.01.T01:CDS
GCACCAAATGCAATGTTGCA+AGG 0.574065 8:+73089619 None:intergenic
ACCAACACAGCAAAAGGAAG+GGG 0.574079 8:-73089583 MsG0880046410.01.T01:CDS
TATACCAGCTGTTAATGTCA+TGG 0.582000 8:+73089768 None:intergenic
CACCAACACAGCAAAAGGAA+GGG 0.586077 8:-73089584 MsG0880046410.01.T01:CDS
TTCAAGTTATACAAACTGAT+AGG 0.597569 8:-73089030 MsG0880046410.01.T01:CDS
GTTCAAGTTTCTTGATAAGG+CGG 0.599661 8:-73089227 MsG0880046410.01.T01:CDS
TTTAGGATTTGCAATTCCAA+CGG 0.600267 8:-73089458 MsG0880046410.01.T01:CDS
TGATTATCCTCATTATAGGA+AGG 0.600926 8:+73088912 None:intergenic
ATCACATGAACAAGATGATG+AGG 0.603566 8:-73088355 MsG0880046410.01.T01:CDS
CCAAGTGAATTGAACAACCA+TGG 0.607927 8:-73089190 MsG0880046410.01.T01:CDS
ATGACCATGACATTAACAGC+TGG 0.609508 8:-73089772 MsG0880046410.01.T01:CDS
GAGAAAGCAAGACAAACCGT+TGG 0.628071 8:+73089442 None:intergenic
GAGCACAATAACAAGTGCAA+TGG 0.632899 8:+73089519 None:intergenic
ATCAAGTTCATCCACCCTGG+TGG 0.633435 8:+73088983 None:intergenic
TCTTGTAAATGTAAGTGTCG+CGG 0.634152 8:+73089398 None:intergenic
GAAACCGTCCTCATAGACTC+TGG 0.637185 8:+73088651 None:intergenic
TAACCACAAATATTCCACTC+AGG 0.639567 8:+73090807 None:intergenic
AGGGAGCGTCTTTACAGACA+TGG 0.644390 8:-73089368 MsG0880046410.01.T01:CDS
TACACTCGACCTAGAACATG+AGG 0.646610 8:-73091082 MsG0880046410.01.T01:CDS
TGCAATACAACCATATAGGA+GGG 0.648217 8:+73090697 None:intergenic
CGTCTTTACAGACATGGCAA+AGG 0.652076 8:-73089362 MsG0880046410.01.T01:CDS
GCTACAAGAAGAATGAGCAT+GGG 0.656063 8:-73088881 MsG0880046410.01.T01:CDS
GATATCAAGTTCATCCACCC+TGG 0.659106 8:+73088980 None:intergenic
AGTGCCAGAGTCTATGAGGA+CGG 0.662866 8:-73088655 MsG0880046410.01.T01:CDS
ACTTCAAGGTTCCACCAGGG+TGG 0.665016 8:-73088994 MsG0880046410.01.T01:CDS
AAATCTTGACCACCTAACCA+AGG 0.667278 8:+73088531 None:intergenic
ACATTTACAAGAAACCTCAA+GGG 0.677570 8:-73089387 MsG0880046410.01.T01:CDS
CAAGGACATTAAGAAAGCTG+AGG 0.683206 8:-73088406 MsG0880046410.01.T01:CDS
CTAACAAAATACAACCTGAG+TGG 0.686497 8:-73090821 MsG0880046410.01.T01:CDS
TCTGTAAAGACGCTCCCTTG+AGG 0.700830 8:+73089373 None:intergenic
GCTTCATCCAGAGAAGCAGG+AGG 0.716276 8:-73091042 MsG0880046410.01.T01:CDS
CTCACTTCAAGGTTCCACCA+GGG 0.729774 8:-73088997 MsG0880046410.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTTTTATTA+AGG - Chr8:73088538-73088557 MsG0880046410.01.T01:CDS 0.0%
!!! AAATGATATGTTTTATTAAG+TGG - Chr8:73088930-73088949 MsG0880046410.01.T01:CDS 15.0%
!! AATGAGGATAATCAATAAAA+GGG - Chr8:73090540-73090559 MsG0880046410.01.T01:intron 20.0%
!! AGATCTGTTAAATATATCAT+TGG - Chr8:73088428-73088447 MsG0880046410.01.T01:CDS 20.0%
!! CATAACTAACTTATTAACAT+GGG - Chr8:73089464-73089483 MsG0880046410.01.T01:CDS 20.0%
!! TAATGAGGATAATCAATAAA+AGG - Chr8:73090539-73090558 MsG0880046410.01.T01:intron 20.0%
!! TATTATTTAATTGCTTCCAT+TGG - Chr8:73090960-73090979 MsG0880046410.01.T01:intron 20.0%
!! TCAATAATCATCTTTCTATT+TGG - Chr8:73090022-73090041 MsG0880046410.01.T01:intron 20.0%
!! TCATAACTAACTTATTAACA+TGG - Chr8:73089463-73089482 MsG0880046410.01.T01:CDS 20.0%
!! TTATATTGGATGGTTATTAT+AGG - Chr8:73089498-73089517 MsG0880046410.01.T01:CDS 20.0%
!!! AATTTGTTGTTTCATTGTAA+TGG - Chr8:73090366-73090385 MsG0880046410.01.T01:intron 20.0%
!!! TTATTGATTATCCTCATTAT+AGG + Chr8:73090538-73090557 None:intergenic 20.0%
! AAAAGAATCAATCAAAACCT+TGG + Chr8:73089565-73089584 None:intergenic 25.0%
! AACATGCACTACATATAAAT+AGG - Chr8:73089375-73089394 MsG0880046410.01.T01:CDS 25.0%
! AATTAGAGAGCTTCTTTAAT+TGG - Chr8:73089885-73089904 MsG0880046410.01.T01:intron 25.0%
! ATAAAGCAACATCACATAAA+GGG - Chr8:73090883-73090902 MsG0880046410.01.T01:CDS 25.0%
! ATATTCAAACTAATGTAAGC+TGG - Chr8:73089960-73089979 MsG0880046410.01.T01:intron 25.0%
! ATGAACAATGTTGACAATTA+AGG + Chr8:73090865-73090884 None:intergenic 25.0%
! CATGATTTCTTAACATTGTT+TGG - Chr8:73088505-73088524 MsG0880046410.01.T01:CDS 25.0%
! GTCAAGATTTAAATCATACT+AGG - Chr8:73090925-73090944 MsG0880046410.01.T01:intron 25.0%
! GTTCATCAATTTATATTGGA+TGG - Chr8:73089488-73089507 MsG0880046410.01.T01:CDS 25.0%
! TAATGAGTCATTTGAGAAAT+TGG - Chr8:73088561-73088580 MsG0880046410.01.T01:CDS 25.0%
! TGAATAAATACATGTATGCA+TGG + Chr8:73088843-73088862 None:intergenic 25.0%
! TTCATTTCTGATACTTATCT+TGG - Chr8:73088712-73088731 MsG0880046410.01.T01:intron 25.0%
!! TTCAAGTTATACAAACTGAT+AGG - Chr8:73090413-73090432 MsG0880046410.01.T01:intron 25.0%
AACTAATGATGCAATGTTTG+AGG + Chr8:73088686-73088705 None:intergenic 30.0%
ACATAGTAATAGGTACATGT+GGG + Chr8:73088890-73088909 None:intergenic 30.0%
ACATTTACAAGAAACCTCAA+GGG - Chr8:73090056-73090075 MsG0880046410.01.T01:intron 30.0%
ATACAAACTGATAGGTCTAT+TGG - Chr8:73090421-73090440 MsG0880046410.01.T01:intron 30.0%
ATCATTATCATCACAGGTAA+TGG + Chr8:73089714-73089733 None:intergenic 30.0%
ATTGTCAACATCCAAAAGAT+TGG - Chr8:73089741-73089760 MsG0880046410.01.T01:CDS 30.0%
CATAAAGCAACATCACATAA+AGG - Chr8:73090882-73090901 MsG0880046410.01.T01:CDS 30.0%
CTGTTTCAAGACATAGTAAT+AGG + Chr8:73088900-73088919 None:intergenic 30.0%
GAGAAAATTCAAAACTCCAA+TGG + Chr8:73090979-73090998 None:intergenic 30.0%
GATATAAACATAACCAAGCT+TGG - Chr8:73089628-73089647 MsG0880046410.01.T01:CDS 30.0%
GGGAGTTCATCAATTTATAT+TGG - Chr8:73089484-73089503 MsG0880046410.01.T01:CDS 30.0%
GTTATCTATCCTATGTATGT+TGG - Chr8:73090609-73090628 MsG0880046410.01.T01:intron 30.0%
TACATTTACAAGAAACCTCA+AGG - Chr8:73090055-73090074 MsG0880046410.01.T01:intron 30.0%
TCAAACATTGCATCATTAGT+TGG - Chr8:73088685-73088704 MsG0880046410.01.T01:CDS 30.0%
TCATTATCATCACAGGTAAT+GGG + Chr8:73089713-73089732 None:intergenic 30.0%
TGACTCATTAAGTAGATGTT+TGG - Chr8:73089236-73089255 MsG0880046410.01.T01:CDS 30.0%
TGATTATCCTCATTATAGGA+AGG + Chr8:73090534-73090553 None:intergenic 30.0%
TGGAATATTTGTGGTTAATG+TGG - Chr8:73088642-73088661 MsG0880046410.01.T01:CDS 30.0%
TGTCAGAATCAGAAAACATT+AGG - Chr8:73090176-73090195 MsG0880046410.01.T01:intron 30.0%
! AAAGTGAGTCAATGTGATTT+TGG - Chr8:73089283-73089302 MsG0880046410.01.T01:CDS 30.0%
! CAATGACATCACTTTCATTT+TGG - Chr8:73090485-73090504 MsG0880046410.01.T01:intron 30.0%
! TCTTTTGGATGTTGACAATT+AGG + Chr8:73089740-73089759 None:intergenic 30.0%
! TTTAGGATTTGCAATTCCAA+CGG - Chr8:73089985-73090004 MsG0880046410.01.T01:intron 30.0%
AACCATGGAATTGCTAAGAA+TGG - Chr8:73090268-73090287 MsG0880046410.01.T01:intron 35.0%
AACCATTCTTAGCAATTCCA+TGG + Chr8:73090273-73090292 None:intergenic 35.0%
AATGTGGTGCAAATTTGGAA+TGG - Chr8:73088658-73088677 MsG0880046410.01.T01:CDS 35.0%
ACTAATGTAAGCTGGACTTT+AGG - Chr8:73089968-73089987 MsG0880046410.01.T01:intron 35.0%
AGGTCTATCATTATCATCAC+AGG + Chr8:73089720-73089739 None:intergenic 35.0%
ATCACATGAACAAGATGATG+AGG - Chr8:73091088-73091107 MsG0880046410.01.T01:CDS 35.0%
ATGCAATACAACCATATAGG+AGG + Chr8:73088750-73088769 None:intergenic 35.0%
ATGGAATTGCTAAGAATGGT+TGG - Chr8:73090272-73090291 MsG0880046410.01.T01:intron 35.0%
CAACCTATTGCTAGTGTTAA+GGG - Chr8:73091062-73091081 MsG0880046410.01.T01:CDS 35.0%
CCATTATTTGATAAGTGGCA+AGG - Chr8:73091019-73091038 MsG0880046410.01.T01:CDS 35.0%
CTAACAAAATACAACCTGAG+TGG - Chr8:73088622-73088641 MsG0880046410.01.T01:CDS 35.0%
GAACACTTGAAATGCTTGTT+TGG - Chr8:73090319-73090338 MsG0880046410.01.T01:intron 35.0%
GACATAGTAATAGGTACATG+TGG + Chr8:73088891-73088910 None:intergenic 35.0%
GCTTGCCATTATTTGATAAG+TGG - Chr8:73091014-73091033 MsG0880046410.01.T01:intron 35.0%
GTATCTACCTTCCTATAATG+AGG - Chr8:73090524-73090543 MsG0880046410.01.T01:intron 35.0%
GTGATGCAATACAACCATAT+AGG + Chr8:73088753-73088772 None:intergenic 35.0%
GTTGTTCAATTCACTTGGTT+CGG + Chr8:73090251-73090270 None:intergenic 35.0%
TAACCACAAATATTCCACTC+AGG + Chr8:73088639-73088658 None:intergenic 35.0%
TAGAGAGCTTCTTTAATTGG+TGG - Chr8:73089888-73089907 MsG0880046410.01.T01:intron 35.0%
TATACCAGCTGTTAATGTCA+TGG + Chr8:73089678-73089697 None:intergenic 35.0%
TGCAATACAACCATATAGGA+GGG + Chr8:73088749-73088768 None:intergenic 35.0%
TGGTTAATGTGGTGCAAATT+TGG - Chr8:73088653-73088672 MsG0880046410.01.T01:CDS 35.0%
TGTCATATACAAACCAAGCT+TGG + Chr8:73089644-73089663 None:intergenic 35.0%
TTTCTGATACTTATCTTGGC+CGG - Chr8:73088716-73088735 MsG0880046410.01.T01:intron 35.0%
! ACTTTGTAGTTTGCAACAAG+TGG - Chr8:73090297-73090316 MsG0880046410.01.T01:intron 35.0%
! CAGGTTCAAGTTTCTTGATA+AGG - Chr8:73090213-73090232 MsG0880046410.01.T01:intron 35.0%
! CCTTGCCACTTATCAAATAA+TGG + Chr8:73091022-73091041 None:intergenic 35.0%
! GTTCAAGTTTCTTGATAAGG+CGG - Chr8:73090216-73090235 MsG0880046410.01.T01:intron 35.0%
! GTTTGGAATTCTACCAGTAT+GGG - Chr8:73090336-73090355 MsG0880046410.01.T01:intron 35.0%
! TCTTGTAAATGTAAGTGTCG+CGG + Chr8:73090048-73090067 None:intergenic 35.0%
! TGTTTGGAATTCTACCAGTA+TGG - Chr8:73090335-73090354 MsG0880046410.01.T01:intron 35.0%
! TTTTGGCAAAAGCTACACTT+TGG - Chr8:73089300-73089319 MsG0880046410.01.T01:CDS 35.0%
!! AAGCTTGGTTTGTATATGAC+AGG - Chr8:73089643-73089662 MsG0880046410.01.T01:CDS 35.0%
!! AGCTTGGTTTGTATATGACA+GGG - Chr8:73089644-73089663 MsG0880046410.01.T01:CDS 35.0%
!! GACACTGATTCTTAGACAAA+GGG - Chr8:73089205-73089224 MsG0880046410.01.T01:CDS 35.0%
!! TGACACTGATTCTTAGACAA+AGG - Chr8:73089204-73089223 MsG0880046410.01.T01:CDS 35.0%
AAAAGCAAACCAAAGCTCAC+GGG + Chr8:73090696-73090715 None:intergenic 40.0%
AAACCTGACAATGCAAACTG+CGG + Chr8:73090720-73090739 None:intergenic 40.0%
AAAGGGAAAACACCTTGGTT+AGG - Chr8:73090900-73090919 MsG0880046410.01.T01:intron 40.0%
AAATCTTGACCACCTAACCA+AGG + Chr8:73090915-73090934 None:intergenic 40.0%
AGCTAGCAAGCATTATACCA+AGG - Chr8:73089545-73089564 MsG0880046410.01.T01:CDS 40.0%
ATGACCATGACATTAACAGC+TGG - Chr8:73089671-73089690 MsG0880046410.01.T01:CDS 40.0%
ATGGGATGCAGAATCAGAAT+TGG - Chr8:73090580-73090599 MsG0880046410.01.T01:intron 40.0%
CAAAAGCAAACCAAAGCTCA+CGG + Chr8:73090697-73090716 None:intergenic 40.0%
CAACCTGAGTGGAATATTTG+TGG - Chr8:73088633-73088652 MsG0880046410.01.T01:CDS 40.0%
CAAGGACATTAAGAAAGCTG+AGG - Chr8:73091037-73091056 MsG0880046410.01.T01:CDS 40.0%
CACATAAAGGGAAAACACCT+TGG - Chr8:73090895-73090914 MsG0880046410.01.T01:intron 40.0%
CAGCTAGGAGTTCTATTTAC+AGG - Chr8:73089764-73089783 MsG0880046410.01.T01:CDS 40.0%
CATTATAGCAACAGCAGCAA+AGG + Chr8:73090751-73090770 None:intergenic 40.0%
CCAAGTGAATTGAACAACCA+TGG - Chr8:73090253-73090272 MsG0880046410.01.T01:intron 40.0%
CCATGGTTGTTCAATTCACT+TGG + Chr8:73090256-73090275 None:intergenic 40.0%
CTGGATGAAGCTTCATTAGA+TGG + Chr8:73088392-73088411 None:intergenic 40.0%
CTTTGCTGCTGTTGCTATAA+TGG - Chr8:73090749-73090768 MsG0880046410.01.T01:CDS 40.0%
GAGCACAATAACAAGTGCAA+TGG + Chr8:73089927-73089946 None:intergenic 40.0%
GCAACCTATTGCTAGTGTTA+AGG - Chr8:73091061-73091080 MsG0880046410.01.T01:CDS 40.0%
GCTACAAGAAGAATGAGCAT+GGG - Chr8:73090562-73090581 MsG0880046410.01.T01:intron 40.0%
GGACAAGCTCAAAAAGAAGA+TGG + Chr8:73090823-73090842 None:intergenic 40.0%
GGAGTTCTATTTACAGGTCT+TGG - Chr8:73089770-73089789 MsG0880046410.01.T01:CDS 40.0%
GGTCTTGGACTATTATCCAT+TGG - Chr8:73089785-73089804 MsG0880046410.01.T01:intron 40.0%
GTAGTGCATGTTTATGATCG+CGG + Chr8:73089367-73089386 None:intergenic 40.0%
GTCTATTGGATCTCACTTCA+AGG - Chr8:73090435-73090454 MsG0880046410.01.T01:intron 40.0%
TCTCCCTTAACACTAGCAAT+AGG + Chr8:73091068-73091087 None:intergenic 40.0%
TGAACAAGATGATGAGGAGA+AGG - Chr8:73091094-73091113 MsG0880046410.01.T01:CDS 40.0%
TGGGATGCAGAATCAGAATT+GGG - Chr8:73090581-73090600 MsG0880046410.01.T01:intron 40.0%
TGGTTGTATTGCATCACTTC+TGG - Chr8:73088756-73088775 MsG0880046410.01.T01:intron 40.0%
TTGTCCATTGCAAACTACTC+TGG - Chr8:73090837-73090856 MsG0880046410.01.T01:CDS 40.0%
TTTGACACCAACACAGCAAA+AGG - Chr8:73089854-73089873 MsG0880046410.01.T01:intron 40.0%
! AGATGATGAGGAGAAGGTTT+TGG - Chr8:73091100-73091119 MsG0880046410.01.T01:CDS 40.0%
! TTAGGCTTGTTCAGACAAAC+AGG - Chr8:73090194-73090213 MsG0880046410.01.T01:intron 40.0%
!! TTGCTGTGTTGGTGTCAAAT+TGG + Chr8:73089853-73089872 None:intergenic 40.0%
AACAAAATCACGGTGGTCTG+CGG + Chr8:73089339-73089358 None:intergenic 45.0%
ACACCAACACAGCAAAAGGA+AGG - Chr8:73089858-73089877 MsG0880046410.01.T01:intron 45.0%
ACCAACACAGCAAAAGGAAG+GGG - Chr8:73089860-73089879 MsG0880046410.01.T01:intron 45.0%
AGGCCTTGCAACATTGCATT+TGG - Chr8:73089821-73089840 MsG0880046410.01.T01:intron 45.0%
ATGGATCAGCAGAGCACATT+TGG - Chr8:73090385-73090404 MsG0880046410.01.T01:intron 45.0%
ATGGCAATGCCTCATGTTCT+AGG + Chr8:73088373-73088392 None:intergenic 45.0%
ATTCTACCAGTATGGGTGAC+AGG - Chr8:73090343-73090362 MsG0880046410.01.T01:intron 45.0%
CAAATTCCTGTCACCCATAC+TGG + Chr8:73090352-73090371 None:intergenic 45.0%
CACCAACACAGCAAAAGGAA+GGG - Chr8:73089859-73089878 MsG0880046410.01.T01:intron 45.0%
CATCCAAAAGATTGGCAGCT+AGG - Chr8:73089749-73089768 MsG0880046410.01.T01:CDS 45.0%
CGCGGTAACCAACAAAATCA+CGG + Chr8:73089349-73089368 None:intergenic 45.0%
CGTCTTTACAGACATGGCAA+AGG - Chr8:73090081-73090100 MsG0880046410.01.T01:intron 45.0%
CTGCAGCTACCAACATACAT+AGG + Chr8:73090621-73090640 None:intergenic 45.0%
GAGAAAGCAAGACAAACCGT+TGG + Chr8:73090004-73090023 None:intergenic 45.0%
GATATCAAGTTCATCCACCC+TGG + Chr8:73090466-73090485 None:intergenic 45.0%
GCACCAAATGCAATGTTGCA+AGG + Chr8:73089827-73089846 None:intergenic 45.0%
GGACTATTATCCATTGGTGC+TGG - Chr8:73089791-73089810 MsG0880046410.01.T01:intron 45.0%
GGCTACAAGAAGAATGAGCA+TGG - Chr8:73090561-73090580 MsG0880046410.01.T01:intron 45.0%
GGTAACCAACAAAATCACGG+TGG + Chr8:73089346-73089365 None:intergenic 45.0%
TACAACCATATAGGAGGGTC+CGG + Chr8:73088744-73088763 None:intergenic 45.0%
TACACTCGACCTAGAACATG+AGG - Chr8:73088361-73088380 MsG0880046410.01.T01:CDS 45.0%
! ACTCCTAGCTGCCAATCTTT+TGG + Chr8:73089755-73089774 None:intergenic 45.0%
! ATACTTATCTTGGCCGGTTC+CGG - Chr8:73088722-73088741 MsG0880046410.01.T01:intron 45.0%
! GGAACCAGAGTAGTTTGCAA+TGG + Chr8:73090844-73090863 None:intergenic 45.0%
! TGTTCTAGGTCGAGTGTAGA+AGG + Chr8:73088359-73088378 None:intergenic 45.0%
!! CTATTATCCATTGGTGCTGG+TGG - Chr8:73089794-73089813 MsG0880046410.01.T01:intron 45.0%
!! GCACTTGTTATTGTGCTCAC+TGG - Chr8:73089929-73089948 MsG0880046410.01.T01:intron 45.0%
!!! GAGAAGGTTTTGGACTTGGT+AGG - Chr8:73091110-73091129 MsG0880046410.01.T01:CDS 45.0%
!!! TGAGGAGAAGGTTTTGGACT+TGG - Chr8:73091106-73091125 MsG0880046410.01.T01:CDS 45.0%
AGTGCCAGAGTCTATGAGGA+CGG - Chr8:73090788-73090807 MsG0880046410.01.T01:CDS 50.0%
ATCAAGTTCATCCACCCTGG+TGG + Chr8:73090463-73090482 None:intergenic 50.0%
CATAGACTCTGGCACTTGCA+AGG + Chr8:73090784-73090803 None:intergenic 50.0%
CCTAATTCCACCAGCACCAA+TGG + Chr8:73089804-73089823 None:intergenic 50.0%
CTCACTTCAAGGTTCCACCA+GGG - Chr8:73090446-73090465 MsG0880046410.01.T01:intron 50.0%
GAAACCGTCCTCATAGACTC+TGG + Chr8:73090795-73090814 None:intergenic 50.0%
GAAGCTTCATCCAGAGAAGC+AGG - Chr8:73088398-73088417 MsG0880046410.01.T01:CDS 50.0%
GAGTCTATGAGGACGGTTTC+TGG - Chr8:73090795-73090814 MsG0880046410.01.T01:CDS 50.0%
GGGAAAACACCTTGGTTAGG+TGG - Chr8:73090903-73090922 MsG0880046410.01.T01:intron 50.0%
TCTCACTTCAAGGTTCCACC+AGG - Chr8:73090445-73090464 MsG0880046410.01.T01:intron 50.0%
TCTGTAAAGACGCTCCCTTG+AGG + Chr8:73090073-73090092 None:intergenic 50.0%
TGCAAGTGCCAGAGTCTATG+AGG - Chr8:73090784-73090803 MsG0880046410.01.T01:CDS 50.0%
TTGCCGCAGTTTGCATTGTC+AGG - Chr8:73090714-73090733 MsG0880046410.01.T01:CDS 50.0%
TTTGTTTCGCCCGTGAGCTT+TGG - Chr8:73090684-73090703 MsG0880046410.01.T01:intron 50.0%
! GCAGACCACCGTGATTTTGT+TGG - Chr8:73089338-73089357 MsG0880046410.01.T01:CDS 50.0%
!! AGGGAGCGTCTTTACAGACA+TGG - Chr8:73090075-73090094 MsG0880046410.01.T01:intron 50.0%
!! CCATTGGTGCTGGTGGAATT+AGG - Chr8:73089801-73089820 MsG0880046410.01.T01:intron 50.0%
!! TCCCCTTCCTTTTGCTGTGT+TGG + Chr8:73089864-73089883 None:intergenic 50.0%
!! TTGAGAAGAAGCGTCGTGAC+TGG - Chr8:73090644-73090663 MsG0880046410.01.T01:intron 50.0%
ACTTCAAGGTTCCACCAGGG+TGG - Chr8:73090449-73090468 MsG0880046410.01.T01:intron 55.0%
CATATAGGAGGGTCCGGAAC+CGG + Chr8:73088738-73088757 None:intergenic 55.0%
CATCCAGAGAAGCAGGAGGA+TGG - Chr8:73088405-73088424 MsG0880046410.01.T01:CDS 55.0%
GCTTCATCCAGAGAAGCAGG+AGG - Chr8:73088401-73088420 MsG0880046410.01.T01:CDS 55.0%
TCTCCATCCTCCTGCTTCTC+TGG + Chr8:73088411-73088430 None:intergenic 55.0%
CGGTTCCGGACCCTCCTATA+TGG - Chr8:73088736-73088755 MsG0880046410.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 73088323 73091142 73088323 ID=MsG0880046410.01;Name=MsG0880046410.01
Chr8 mRNA 73088323 73091142 73088323 ID=MsG0880046410.01.T01;Parent=MsG0880046410.01;Name=MsG0880046410.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|4|0|581
Chr8 exon 73091016 73091142 73091016 ID=MsG0880046410.01.T01:exon:5764;Parent=MsG0880046410.01.T01
Chr8 exon 73090688 73090905 73090688 ID=MsG0880046410.01.T01:exon:5763;Parent=MsG0880046410.01.T01
Chr8 exon 73088807 73089800 73088807 ID=MsG0880046410.01.T01:exon:5762;Parent=MsG0880046410.01.T01
Chr8 exon 73088323 73088729 73088323 ID=MsG0880046410.01.T01:exon:5761;Parent=MsG0880046410.01.T01
Chr8 CDS 73091016 73091142 73091016 ID=MsG0880046410.01.T01:cds;Parent=MsG0880046410.01.T01
Chr8 CDS 73090688 73090905 73090688 ID=MsG0880046410.01.T01:cds;Parent=MsG0880046410.01.T01
Chr8 CDS 73088807 73089800 73088807 ID=MsG0880046410.01.T01:cds;Parent=MsG0880046410.01.T01
Chr8 CDS 73088323 73088729 73088323 ID=MsG0880046410.01.T01:cds;Parent=MsG0880046410.01.T01
Gene Sequence

>MsG0880046410.01.T01

ATGGAGGAGAATGTTGTGAACACAAATTCTTCTCCTTCTACACTCGACCTAGAACATGAGGCATTGCCATCTAATGAAGCTTCATCCAGAGAAGCAGGAGGATGGAGATCTGTTAAATATATCATTGGTAATGAGTCATTTGAGAAATTGGCATCGATGAGTTTGATATCAAATCTAACAGTGTATCTTCTAACAAAATACAACCTGAGTGGAATATTTGTGGTTAATGTGGTGCAAATTTGGAATGGATCCTCAAACATTGCATCATTAGTTGGTGCTTTCATTTCTGATACTTATCTTGGCCGGTTCCGGACCCTCCTATATGGTTGTATTGCATCACTTCTGGGTATAATGACCATGACATTAACAGCTGGTATACATCAATTAAGACCCATTACCTGTGATGATAATGATAGACCTAATTGTCAACATCCAAAAGATTGGCAGCTAGGAGTTCTATTTACAGGTCTTGGACTATTATCCATTGGTGCTGGTGGAATTAGGCCTTGCAACATTGCATTTGGTGCTGACCAATTTGACACCAACACAGCAAAAGGAAGGGGACAATTAGAGAGCTTCTTTAATTGGTGGTATTTCACTTTCACCATTGCACTTGTTATTGTGCTCACTGGTGTTGTCTATATTCAAACTAATGTAAGCTGGACTTTAGGATTTGCAATTCCAACGGTTTGTCTTGCTTTCTCAATAATCATCTTTCTATTTGGCCGCGACACTTACATTTACAAGAAACCTCAAGGGAGCGTCTTTACAGACATGGCAAAGGTGATCGTTGCAGCATGTCGAAAACGCAAACTTCAGCTTTCAAATAGAACTTTATATGATCATGTTTCTACATTGTCAGAATCAGAAAACATTAGGCTTGTTCAGACAAACAGGTTCAAGTTTCTTGATAAGGCGGCTATAATAGCCGAACCAAGTGAATTGAACAACCATGGAATTGCTAAGAATGGTTGGAGACTTTGTAGTTTGCAACAAGTGGAACACTTGAAATGCTTGTTTGGAATTCTACCAGTATGGGTGACAGGAATTTGTTGTTTCATTGTAATGGATCAGCAGAGCACATTTGGTGTGCTTCAAGTTATACAAACTGATAGGTCTATTGGATCTCACTTCAAGGTTCCACCAGGGTGGATGAACTTGATATCAATGACATCACTTTCATTTTGGATATGCATTTATGAGTGTATCTACCTTCCTATAATGAGGATAATCAATAAAAGGGCTACAAGAAGAATGAGCATGGGATGCAGAATCAGAATTGGGATATTGTTATCTATCCTATGTATGTTGGTAGCTGCAGTTGTTGAGAAGAAGCGTCGTTTAAATGAAGCCTTTGCTGCTGTTGCTATAATGGAATTCTTTACCTTGCAAGTGCCAGAGTCTATGAGGACGGTTTCTGGTGCCATCTTCTTTTTGAGCTTGTCCATTGCAAACTACTCTGGTTCCTTAATTGTCAACATTGTTCATAAAGCAACATCACATAAAGGGAAAACACCTTGGTTAGGTGGTCAAGATTTAAATCATACTAGGCTTGATTACTATTATTATTTAATTGCTTCCATTGGAGTTTTGAATTTTCTCTATTTCAATTTCTTTGCTTGCCATTATTTGATAAGTGGCAAGGACATTAAGAAAGCTGAGGAGCAACCTATTGCTAGTGTTAAGGGAGAATCACATGAACAAGATGATGAGGAGAAGGTTTTGGACTTGGTAGGCACTAGATGA
Protein sequence

>MsG0880046410.01.T01

MEENVVNTNSSPSTLDLEHEALPSNEASSREAGGWRSVKYIIGNESFEKLASMSLISNLTVYLLTKYNLSGIFVVNVVQIWNGSSNIASLVGAFISDTYLGRFRTLLYGCIASLLGIMTMTLTAGIHQLRPITCDDNDRPNCQHPKDWQLGVLFTGLGLLSIGAGGIRPCNIAFGADQFDTNTAKGRGQLESFFNWWYFTFTIALVIVLTGVVYIQTNVSWTLGFAIPTVCLAFSIIIFLFGRDTYIYKKPQGSVFTDMAKVIVAACRKRKLQLSNRTLYDHVSTLSESENIRLVQTNRFKFLDKAAIIAEPSELNNHGIAKNGWRLCSLQQVEHLKCLFGILPVWVTGICCFIVMDQQSTFGVLQVIQTDRSIGSHFKVPPGWMNLISMTSLSFWICIYECIYLPIMRIINKRATRRMSMGCRIRIGILLSILCMLVAAVVEKKRRLNEAFAAVAIMEFFTLQVPESMRTVSGAIFFLSLSIANYSGSLIVNIVHKATSHKGKTPWLGGQDLNHTRLDYYYYLIASIGVLNFLYFNFFACHYLISGKDIKKAEEQPIASVKGESHEQDDEEKVLDLVGTR*