AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046824.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046824.01.T01 MTR_4g115450 99.590 244 1 0 25 268 303 546 0.0 511
MsG0880046824.01.T01 MTR_4g115450 90.000 150 15 0 25 174 482 631 7.87e-82 258
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046824.01.T01 AT2G11000 47.059 238 122 1 31 268 480 713 1.37e-69 228
MsG0880046824.01.T01 AT2G11000 47.059 238 122 1 31 268 470 703 1.58e-69 227
MsG0880046824.01.T01 AT2G11000 47.059 238 122 1 31 268 495 728 1.79e-69 228
MsG0880046824.01.T01 AT2G11000 45.570 158 86 0 31 188 480 637 1.30e-40 148

Find 119 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATCAGGTTGAGATTTC+TGG 0.096680 8:+78792167 None:intergenic
TCCTATAATTGTTTCAAAAT+TGG 0.149982 8:+78786710 None:intergenic
AACCTTCAGCTAGATATATT+TGG 0.230207 8:+78788667 None:intergenic
GGTAGGAGCGAATGCTTATT+TGG 0.240738 8:-78786686 MsG0880046824.01.T01:three_prime_UTR
CCAGAAATCTCAACCTGATT+TGG 0.243411 8:-78792167 MsG0880046824.01.T01:five_prime_UTR
TATGTAATATTACTCTATTC+TGG 0.261553 8:-78789188 MsG0880046824.01.T01:CDS
TTTCCTTCATTGGCTGCCCC+TGG 0.319942 8:-78786565 MsG0880046824.01.T01:three_prime_UTR
CTCAGCTCAGCCATCATGTC+AGG 0.329522 8:+78786887 None:intergenic
TCTCACTGTGGGATTTGAAT+TGG 0.342684 8:-78789088 MsG0880046824.01.T01:CDS
TCAATAAAAGCTCAAATTGC+TGG 0.349366 8:+78787160 None:intergenic
ATGATTATTGCATGGTATAC+TGG 0.350815 8:-78789050 MsG0880046824.01.T01:CDS
CGCATGGCAAAGGCGTAAGC+TGG 0.352459 8:-78790633 MsG0880046824.01.T01:five_prime_UTR
GCTTCATGCATTTCAGAGAT+TGG 0.363260 8:-78792539 MsG0880046824.01.T01:five_prime_UTR
CTGCTCATTGAACCCATCAT+TGG 0.376379 8:-78792218 MsG0880046824.01.T01:five_prime_UTR
GTCCAGAACGGGAAACTCTT+TGG 0.379046 8:-78791421 MsG0880046824.01.T01:intron
TCATGATTCTCTACGACTTC+AGG 0.380221 8:+78791355 None:intergenic
GGTTTCTAGAGCTCATCTTC+AGG 0.393154 8:-78792146 MsG0880046824.01.T01:intron
GGAAGCTGCCTTGCTCTTTG+TGG 0.397333 8:-78792197 MsG0880046824.01.T01:five_prime_UTR
ATATATCTAGCTGAAGGTTT+AGG 0.397652 8:-78788663 MsG0880046824.01.T01:CDS
TCTAGATGCTAGCTGCTTTG+AGG 0.398394 8:-78787840 MsG0880046824.01.T01:intron
TTGCCTTACACTCCTTGCTT+GGG 0.403650 8:+78786516 None:intergenic
GGGTGGAAGAGCAAACTTAT+TGG 0.412236 8:-78789125 MsG0880046824.01.T01:CDS
TTGCCATGACAGTCATTTCC+CGG 0.412583 8:-78786832 MsG0880046824.01.T01:CDS
TGAAGTAATCGCACATAACT+AGG 0.414935 8:+78786960 None:intergenic
ATAGAAAATACAACTGCATC+TGG 0.419174 8:-78792455 MsG0880046824.01.T01:five_prime_UTR
GTTGCCTTACACTCCTTGCT+TGG 0.424212 8:+78786515 None:intergenic
ACGACCCCATGGAGGAGGTT+TGG 0.426730 8:-78792582 MsG0880046824.01.T01:five_prime_UTR
GTTTATGGTGCAACTTCAAC+AGG 0.426790 8:-78791317 MsG0880046824.01.T01:intron
AGCCATCATGTCAGGGTCAT+TGG 0.441961 8:+78786895 None:intergenic
TTTCTGTTAGCTGTTGTCAC+TGG 0.446558 8:-78789225 MsG0880046824.01.T01:CDS
AAACTAGCATCAAAGCCAAT+TGG 0.451654 8:+78792425 None:intergenic
GCTGGAGCTAGATTTCAAAA+AGG 0.453321 8:-78790089 MsG0880046824.01.T01:five_prime_UTR
TCTATGATTACTAGAGCTGC+TGG 0.453738 8:-78791382 MsG0880046824.01.T01:five_prime_UTR
GTGCCCAAGCAAGGAGTGTA+AGG 0.458248 8:-78786519 MsG0880046824.01.T01:three_prime_UTR
TTGATTGCCCGTGGCGGTGT+TGG 0.458762 8:+78792383 None:intergenic
AGCAAGGCAGCTTCCAATGA+TGG 0.460920 8:+78792205 None:intergenic
CCTTCATTCTACTCTGCAGC+TGG 0.463019 8:-78790107 MsG0880046824.01.T01:five_prime_UTR
ATGGATCGGGTGTTCCTAGC+CGG 0.464500 8:+78786813 None:intergenic
GCATCTGGTTGTAAACCAAT+TGG 0.465040 8:-78792440 MsG0880046824.01.T01:five_prime_UTR
AGTTATGTGCGATTACTTCA+AGG 0.471500 8:-78786957 MsG0880046824.01.T01:CDS
CTCTGAAGAAACCTCACAGC+TGG 0.476261 8:+78788690 None:intergenic
CCTCGTGTTCGGTACTGAAA+GGG 0.480500 8:+78787788 None:intergenic
TGAGCTCTAGAAACCAAATC+AGG 0.482304 8:+78792154 None:intergenic
TTCCTTCATTGGCTGCCCCT+GGG 0.482477 8:-78786564 MsG0880046824.01.T01:three_prime_UTR
CAACTCCAAACCTCCTCCAT+GGG 0.484565 8:+78792577 None:intergenic
ACCTCGTGTTCGGTACTGAA+AGG 0.487168 8:+78787787 None:intergenic
TGAAACAATTATAGGATGGT+AGG 0.487990 8:-78786703 MsG0880046824.01.T01:three_prime_UTR
GCATGGCAAAGGCGTAAGCT+GGG 0.491163 8:-78790632 MsG0880046824.01.T01:five_prime_UTR
TGCCACTGCTCATTGCCATC+CGG 0.494721 8:+78788983 None:intergenic
GAAATCTTCACCGATGGATC+GGG 0.495769 8:+78786800 None:intergenic
GTCTGATATGAGATGCCATC+AGG 0.495828 8:+78787126 None:intergenic
AGAAATCTTCACCGATGGAT+CGG 0.499114 8:+78786799 None:intergenic
ACTCTATTCTGGCAGACTCT+AGG 0.508561 8:-78789177 MsG0880046824.01.T01:CDS
GCAGAGTAGAATGAAGGATC+AGG 0.512714 8:+78790113 None:intergenic
AGAAAACCTTACCTCGTGTT+CGG 0.515250 8:+78787777 None:intergenic
CAATGATGGGTTCAATGAGC+AGG 0.515588 8:+78792219 None:intergenic
TGGATCGGGTGTTCCTAGCC+GGG 0.516173 8:+78786814 None:intergenic
TTCCCAGGGGCAGCCAATGA+AGG 0.522088 8:+78786562 None:intergenic
TTGCAGAGAAGAAGCATCTC+CGG 0.522130 8:-78789002 MsG0880046824.01.T01:CDS
AAAATGTTTCTTGCTTCCCA+GGG 0.525739 8:+78786548 None:intergenic
ATCAGCTCCAACACCGCCAC+GGG 0.528600 8:-78792390 MsG0880046824.01.T01:five_prime_UTR
CCAACTCCAAACCTCCTCCA+TGG 0.528821 8:+78792576 None:intergenic
AGTATACCATGCAATAATCA+TGG 0.532028 8:+78789052 None:intergenic
TACTCACAGAGAAGTTAGCC+TGG 0.532809 8:+78787085 None:intergenic
ACAATAGCAGTAGCAAAGAA+AGG 0.535418 8:+78786758 None:intergenic
TATTCCAGCATATTCTTGTG+TGG 0.537710 8:-78789146 MsG0880046824.01.T01:CDS
AGGAGGTTTGGAGTTGGCAA+GGG 0.538582 8:-78792570 MsG0880046824.01.T01:five_prime_UTR
CGCCAATGACCCTGACATGA+TGG 0.543379 8:-78786897 MsG0880046824.01.T01:CDS
CAGCTTACGCCTTTGCCATG+CGG 0.547819 8:+78790634 None:intergenic
ATGACAGTCATTTCCCGGCT+AGG 0.549381 8:-78786827 MsG0880046824.01.T01:CDS
GTACAAATGCCGCATGGCAA+AGG 0.553039 8:-78790643 MsG0880046824.01.T01:five_prime_UTR
ATGGCAATGAGCAGTGGCAC+TGG 0.555016 8:-78788979 MsG0880046824.01.T01:intron
TGGGGAAAATGCTACAAGAC+TGG 0.557374 8:-78790613 MsG0880046824.01.T01:five_prime_UTR
TTGAAAGCTTGCCTTCCTGA+TGG 0.558104 8:-78787141 MsG0880046824.01.T01:CDS
GAGGAGGTTTGGAGTTGGCA+AGG 0.562398 8:-78792571 MsG0880046824.01.T01:five_prime_UTR
AAGATTGCAAAAGAGTTGAA+AGG 0.562682 8:-78786926 MsG0880046824.01.T01:CDS
GCAAGGCAGCTTCCAATGAT+GGG 0.562842 8:+78792206 None:intergenic
CTAGTAATCATAGAAAACAT+AGG 0.563010 8:+78791391 None:intergenic
CCAGCTGCAGAGTAGAATGA+AGG 0.563513 8:+78790107 None:intergenic
CTGGCGTGTCACCTATGTAC+AGG 0.566208 8:-78790594 MsG0880046824.01.T01:five_prime_UTR
CTTTCTTAGAGCTAGTGCTC+CGG 0.567395 8:-78792495 MsG0880046824.01.T01:five_prime_UTR
TCGGTACTGAAAGGGCTTTG+TGG 0.569967 8:+78787796 None:intergenic
ATTCCAGCATATTCTTGTGT+GGG 0.572349 8:-78789145 MsG0880046824.01.T01:CDS
GCTAGGAACACCCGATCCAT+CGG 0.575650 8:-78786810 MsG0880046824.01.T01:CDS
CCATGGAGGAGGTTTGGAGT+TGG 0.575962 8:-78792576 MsG0880046824.01.T01:five_prime_UTR
GTAAAAGAAATCTTCACCGA+TGG 0.578104 8:+78786794 None:intergenic
ATGAAACGACCCCATGGAGG+AGG 0.580791 8:-78792587 MsG0880046824.01.T01:five_prime_UTR
AGAGATTCTTTAAAAGACGC+AGG 0.585981 8:-78788732 MsG0880046824.01.T01:CDS
CCACCCACACAAGAATATGC+TGG 0.585993 8:+78789142 None:intergenic
GAATTTAACCACAAAGAGCA+AGG 0.588035 8:+78792189 None:intergenic
GAAGTAATCGCACATAACTA+GGG 0.588385 8:+78786961 None:intergenic
CCAGCATATTCTTGTGTGGG+TGG 0.590532 8:-78789142 MsG0880046824.01.T01:CDS
CTCCGGATGGCAATGAGCAG+TGG 0.590817 8:-78788985 MsG0880046824.01.T01:CDS
ATGTCTATGAAACGACCCCA+TGG 0.592884 8:-78792593 MsG0880046824.01.T01:five_prime_UTR
TGAATGACACACCTGTACAT+AGG 0.594590 8:+78790583 None:intergenic
GTTTCATAGACATCAAAAGA+TGG 0.596131 8:+78792603 None:intergenic
ATACAAGGAATCAACTGCCC+AGG 0.597229 8:-78787103 MsG0880046824.01.T01:CDS
GTACTGAAAGGGCTTTGTGG+TGG 0.598454 8:+78787799 None:intergenic
CATCTCATATCAGACATACA+AGG 0.600509 8:-78787118 MsG0880046824.01.T01:CDS
CCCTTTCAGTACCGAACACG+AGG 0.602324 8:-78787788 MsG0880046824.01.T01:intron
AGCCAAATATATCTAGCTGA+AGG 0.603779 8:-78788669 MsG0880046824.01.T01:CDS
TCAGCTCAGCCATCATGTCA+GGG 0.605942 8:+78786888 None:intergenic
TAGCCGGGAAATGACTGTCA+TGG 0.611284 8:+78786829 None:intergenic
TATCAGCTCCAACACCGCCA+CGG 0.617168 8:-78792391 MsG0880046824.01.T01:five_prime_UTR
CATGGCAAAGGCGTAAGCTG+GGG 0.621453 8:-78790631 MsG0880046824.01.T01:five_prime_UTR
ATATAATGTCTAAATCATGA+AGG 0.631770 8:+78792245 None:intergenic
TCTAGCTGAAGGTTTAGGCA+TGG 0.637461 8:-78788658 MsG0880046824.01.T01:intron
ACTCACAGAGAAGTTAGCCT+GGG 0.640335 8:+78787086 None:intergenic
TGCAGATCTCTCCAGCTGTG+AGG 0.642688 8:-78788701 MsG0880046824.01.T01:CDS
GATATGAGATGCCATCAGGA+AGG 0.651110 8:+78787130 None:intergenic
CTGACATGATGGCTGAGCTG+AGG 0.654189 8:-78786886 MsG0880046824.01.T01:CDS
TGCTGACCATGATTATTGCA+TGG 0.658035 8:-78789058 MsG0880046824.01.T01:CDS
AGAGAAGAAGCATCTCCGGA+TGG 0.658119 8:-78788998 MsG0880046824.01.T01:CDS
TTATTTGTACAAATGCCGCA+TGG 0.663397 8:-78790649 MsG0880046824.01.T01:five_prime_UTR
AGAACGGGAAACTCTTTGGT+CGG 0.670824 8:-78791417 MsG0880046824.01.T01:five_prime_UTR
AACTCCAAACCTCCTCCATG+GGG 0.677968 8:+78792578 None:intergenic
AAATGTTTCTTGCTTCCCAG+GGG 0.718978 8:+78786549 None:intergenic
TCTATGAAACGACCCCATGG+AGG 0.748403 8:-78792590 MsG0880046824.01.T01:five_prime_UTR
TGGGAACACTTCAAACAACG+AGG 0.755812 8:-78790062 MsG0880046824.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATACAATCTTATATTT+GGG + Chr8:78787250-78787269 None:intergenic 10.0%
!! TATAAATACAATCTTATATT+TGG + Chr8:78787251-78787270 None:intergenic 10.0%
!!! TAAAAATGTACTTTATTTTT+TGG - Chr8:78788037-78788056 MsG0880046824.01.T01:intron 10.0%
!!! TATTTTCAATAAATTAAATG+AGG + Chr8:78787183-78787202 None:intergenic 10.0%
!!! TCTTAATTCTTATTTATTTT+TGG - Chr8:78788615-78788634 MsG0880046824.01.T01:intron 10.0%
!! AAAAAACATGATTATTAGAT+TGG + Chr8:78789299-78789318 None:intergenic 15.0%
!! AGAAGTTATAAATGAAAAAA+AGG + Chr8:78789660-78789679 None:intergenic 15.0%
!! TAATGTGAATATACAAAATT+CGG + Chr8:78790663-78790682 None:intergenic 15.0%
!! TTATAATCTGTACAATATTA+TGG - Chr8:78788389-78788408 MsG0880046824.01.T01:intron 15.0%
!! TTTCTTCATTTATATGTTAT+AGG - Chr8:78787214-78787233 MsG0880046824.01.T01:intron 15.0%
!!! ATAGGTTGATTAATTAAAAA+AGG + Chr8:78788283-78788302 None:intergenic 15.0%
!!! GTAATGAAATTAAAGTATTT+TGG - Chr8:78787794-78787813 MsG0880046824.01.T01:CDS 15.0%
!!! TAGGTTGATTAATTAAAAAA+GGG + Chr8:78788282-78788301 None:intergenic 15.0%
!!! TAGTAATTTTTCAATGTTAT+CGG - Chr8:78791688-78791707 MsG0880046824.01.T01:intron 15.0%
!!! TCTAATAATCATGTTTTTTT+AGG - Chr8:78789300-78789319 MsG0880046824.01.T01:intron 15.0%
!!! TTGGGATATATTTTTTTTAT+TGG - Chr8:78788662-78788681 MsG0880046824.01.T01:CDS 15.0%
!!! TTTTTAATTAAGAAAAGTGA+TGG - Chr8:78790160-78790179 MsG0880046824.01.T01:intron 15.0%
!! AAATTAATCTCATTAACTAC+TGG + Chr8:78789620-78789639 None:intergenic 20.0%
!! AATAAATTAAATGAGGTACA+AGG + Chr8:78787176-78787195 None:intergenic 20.0%
!! AATAGTATTTAGAGAAGAAT+GGG - Chr8:78791530-78791549 MsG0880046824.01.T01:intron 20.0%
!! AGTAGTTAATGAGATTAATT+TGG - Chr8:78789619-78789638 MsG0880046824.01.T01:intron 20.0%
!! AGTTACAAAAAAATTTGTGT+TGG - Chr8:78787304-78787323 MsG0880046824.01.T01:intron 20.0%
!! ATAAAATGGAAAGAGTTTAA+AGG - Chr8:78789133-78789152 MsG0880046824.01.T01:CDS 20.0%
!! ATATAATGTCTAAATCATGA+AGG + Chr8:78786847-78786866 None:intergenic 20.0%
!! CAATTTAGATAATTTACTGA+AGG + Chr8:78791664-78791683 None:intergenic 20.0%
!! CGATATAACTTTATTATTCT+GGG + Chr8:78789257-78789276 None:intergenic 20.0%
!! GATAAATAAACGTTGTAATA+TGG + Chr8:78786793-78786812 None:intergenic 20.0%
!! TAAGTGCAAAATAATTGATA+AGG - Chr8:78789434-78789453 MsG0880046824.01.T01:intron 20.0%
!! TAATAGTATTTAGAGAAGAA+TGG - Chr8:78791529-78791548 MsG0880046824.01.T01:intron 20.0%
!! TATGTAATATTACTCTATTC+TGG - Chr8:78789901-78789920 MsG0880046824.01.T01:intron 20.0%
!! TCCTATAATTGTTTCAAAAT+TGG + Chr8:78792382-78792401 None:intergenic 20.0%
!! TCGATATAACTTTATTATTC+TGG + Chr8:78789258-78789277 None:intergenic 20.0%
!! TTCATATTCTTTAACAGATA+AGG + Chr8:78788566-78788585 None:intergenic 20.0%
!!! AAGAAAATGTTAAAGTGTTA+TGG - Chr8:78787353-78787372 MsG0880046824.01.T01:intron 20.0%
!!! ACCAATTTTGAAACAATTAT+AGG - Chr8:78792378-78792397 MsG0880046824.01.T01:five_prime_UTR 20.0%
!!! ACTTTTTCTCTTTTAAATTG+CGG + Chr8:78791110-78791129 None:intergenic 20.0%
!!! AGTAATTTTTCAATGTTATC+GGG - Chr8:78791689-78791708 MsG0880046824.01.T01:intron 20.0%
!!! ATGAGATTAATTTGGTAAAA+TGG - Chr8:78789627-78789646 MsG0880046824.01.T01:intron 20.0%
!!! ATGTTTGAAGTTATAATACT+TGG - Chr8:78788643-78788662 MsG0880046824.01.T01:intron 20.0%
!!! ATGTTTTTTTGTTTGTTTGA+GGG + Chr8:78787926-78787945 None:intergenic 20.0%
!!! ATTTTGAAACAATTATAGGA+TGG - Chr8:78792382-78792401 MsG0880046824.01.T01:five_prime_UTR 20.0%
!!! CAAAATTTTTTGTTTGGAAA+AGG - Chr8:78786726-78786745 MsG0880046824.01.T01:exon 20.0%
!!! GAATTTTATTCCATAAGAAA+AGG - Chr8:78788335-78788354 MsG0880046824.01.T01:intron 20.0%
!!! GATTGAAACTGTAATTTTTT+AGG - Chr8:78792483-78792502 MsG0880046824.01.T01:five_prime_UTR 20.0%
!!! TATTTTTTTCGAACAAATTG+TGG - Chr8:78792447-78792466 MsG0880046824.01.T01:five_prime_UTR 20.0%
!!! TGTTATTTGATTCAATTTAG+TGG - Chr8:78791196-78791215 MsG0880046824.01.T01:intron 20.0%
!!! TGTTTGAAGTTATAATACTT+GGG - Chr8:78788644-78788663 MsG0880046824.01.T01:intron 20.0%
!!! TTGACTTCTTTAAAAATAGA+CGG - Chr8:78792051-78792070 MsG0880046824.01.T01:intron 20.0%
!!! TTTTCAAAAGCTTAAACAAA+AGG + Chr8:78787999-78788018 None:intergenic 20.0%
! AAACAAGTAGAAAACGTTAA+GGG - Chr8:78788811-78788830 MsG0880046824.01.T01:intron 25.0%
! AAGAAAAAGACTTGTCAATT+TGG + Chr8:78790888-78790907 None:intergenic 25.0%
! AATATACCGTTACATTTCAT+TGG - Chr8:78789371-78789390 MsG0880046824.01.T01:intron 25.0%
! ACTACTAAAGTGGTATTATA+AGG - Chr8:78790213-78790232 MsG0880046824.01.T01:intron 25.0%
! ACTGTGATTTATAGTAATGT+AGG + Chr8:78789749-78789768 None:intergenic 25.0%
! ATACATATATTTCTCTTCCT+AGG + Chr8:78787129-78787148 None:intergenic 25.0%
! ATACATTTGAAAACTGTATG+TGG + Chr8:78791344-78791363 None:intergenic 25.0%
! ATTGAATCAAATAACAAAGC+TGG + Chr8:78791192-78791211 None:intergenic 25.0%
! ATTGTTAAGTCAAATCATTG+AGG + Chr8:78790474-78790493 None:intergenic 25.0%
! CATAGTTTACTTTAACCTAA+GGG - Chr8:78790946-78790965 MsG0880046824.01.T01:intron 25.0%
! CGACAATTAAAAGAAACAAA+TGG - Chr8:78789546-78789565 MsG0880046824.01.T01:intron 25.0%
! CTAAATACTATTAGTTCCTT+TGG + Chr8:78791522-78791541 None:intergenic 25.0%
! CTAGCATCTAGAAAAATAAT+TGG + Chr8:78791241-78791260 None:intergenic 25.0%
! CTAGTAATCATAGAAAACAT+AGG + Chr8:78787701-78787720 None:intergenic 25.0%
! GGAAAAGGTAAATATTTAGA+GGG - Chr8:78786741-78786760 MsG0880046824.01.T01:exon 25.0%
! TAAACAAGTAGAAAACGTTA+AGG - Chr8:78788810-78788829 MsG0880046824.01.T01:intron 25.0%
! TACAATCTTATATTTGGGAA+AGG + Chr8:78787245-78787264 None:intergenic 25.0%
! TACATATATTTCTCTTCCTA+GGG + Chr8:78787128-78787147 None:intergenic 25.0%
! TAGATTTAAGAAGATTTCGA+TGG - Chr8:78788587-78788606 MsG0880046824.01.T01:intron 25.0%
! TAGATTTCAAAAAGGAGTTT+GGG - Chr8:78789008-78789027 MsG0880046824.01.T01:CDS 25.0%
! TATTTATAGACCTAATGTGT+TGG - Chr8:78787263-78787282 MsG0880046824.01.T01:intron 25.0%
! TCATAGTTTACTTTAACCTA+AGG - Chr8:78790945-78790964 MsG0880046824.01.T01:intron 25.0%
! TGGAAAAGGTAAATATTTAG+AGG - Chr8:78786740-78786759 MsG0880046824.01.T01:exon 25.0%
! TTAACCATACAGAAAATTGT+CGG + Chr8:78791801-78791820 None:intergenic 25.0%
! TTATGCTATACTCTAATACT+AGG - Chr8:78790843-78790862 MsG0880046824.01.T01:intron 25.0%
! TTTGAAAATGTCAGATACAT+TGG - Chr8:78789501-78789520 MsG0880046824.01.T01:intron 25.0%
!! AAAACTATTTAGGGTATGTT+TGG + Chr8:78791169-78791188 None:intergenic 25.0%
!! ATATTTTGTTCAGACATTTC+CGG + Chr8:78786616-78786635 None:intergenic 25.0%
!! ATTCTGTTTTACAAGAAATC+TGG + Chr8:78787446-78787465 None:intergenic 25.0%
!! TAAAGTGTTATGGTACAAAA+GGG - Chr8:78787363-78787382 MsG0880046824.01.T01:intron 25.0%
!! TAACGTTTTCTACTTGTTTA+GGG + Chr8:78788810-78788829 None:intergenic 25.0%
!! TATATATAAGCACCAGTTTT+AGG + Chr8:78789084-78789103 None:intergenic 25.0%
!! TCTGACATTTTCAAAGTTTA+AGG + Chr8:78789496-78789515 None:intergenic 25.0%
!! TTAAAGTGTTATGGTACAAA+AGG - Chr8:78787362-78787381 MsG0880046824.01.T01:intron 25.0%
!! TTAACGTTTTCTACTTGTTT+AGG + Chr8:78788811-78788830 None:intergenic 25.0%
!! TTATAGCAATTTTCCTTCAT+TGG - Chr8:78792514-78792533 MsG0880046824.01.T01:five_prime_UTR 25.0%
!! TTGAAGACAAAATTAGCTTA+TGG - Chr8:78790269-78790288 MsG0880046824.01.T01:intron 25.0%
!!! GATGTTTTTTTGTTTGTTTG+AGG + Chr8:78787927-78787946 None:intergenic 25.0%
!!! GGCAATCAAAATTTTTTGTT+TGG - Chr8:78786720-78786739 MsG0880046824.01.T01:three_prime_UTR 25.0%
!!! GTAGATTTTTGTTTCACTAA+CGG - Chr8:78787085-78787104 MsG0880046824.01.T01:intron 25.0%
!!! GTGAGTTTTTTTATGAATCA+CGG - Chr8:78789780-78789799 MsG0880046824.01.T01:intron 25.0%
!!! TAATTGTGCTTTTAGTTGTA+TGG - Chr8:78790244-78790263 MsG0880046824.01.T01:intron 25.0%
!!! TTTAGTAGTCATTGATTTGT+AGG + Chr8:78790202-78790221 None:intergenic 25.0%
AACCTTCAGCTAGATATATT+TGG + Chr8:78790425-78790444 None:intergenic 30.0%
AACGTTTATTTATCTCTTCC+AGG - Chr8:78786799-78786818 MsG0880046824.01.T01:CDS 30.0%
AAGAAAAGTGATGGTATATG+AGG - Chr8:78790169-78790188 MsG0880046824.01.T01:intron 30.0%
AAGAAACTTGTCTCCTATTT+GGG - Chr8:78788700-78788719 MsG0880046824.01.T01:CDS 30.0%
AAGATTGCAAAAGAGTTGAA+AGG - Chr8:78792163-78792182 MsG0880046824.01.T01:five_prime_UTR 30.0%
AATACGAAAACAGGAACAAA+TGG - Chr8:78788255-78788274 MsG0880046824.01.T01:intron 30.0%
AATGAGCCAATGAAATGTAA+CGG + Chr8:78789380-78789399 None:intergenic 30.0%
ACAAAGCTGGAAAACTATTT+AGG + Chr8:78791179-78791198 None:intergenic 30.0%
ACTTGTCAATTTGGCAAAAT+AGG + Chr8:78790879-78790898 None:intergenic 30.0%
AGAGTGAAAGACATACATAT+AGG + Chr8:78787836-78787855 None:intergenic 30.0%
AGCTGATAACAGGATTTAAA+TGG + Chr8:78787641-78787660 None:intergenic 30.0%
AGTAGCATAGATACAAATTG+AGG + Chr8:78790304-78790323 None:intergenic 30.0%
AGTATACCATGCAATAATCA+TGG + Chr8:78790040-78790059 None:intergenic 30.0%
ATACGAAAACAGGAACAAAT+GGG - Chr8:78788256-78788275 MsG0880046824.01.T01:intron 30.0%
ATAGAAAATACAACTGCATC+TGG - Chr8:78786634-78786653 MsG0880046824.01.T01:three_prime_UTR 30.0%
ATATATCTAGCTGAAGGTTT+AGG - Chr8:78790426-78790445 MsG0880046824.01.T01:intron 30.0%
ATCTTGCATTCTAAGTTCTA+AGG + Chr8:78790801-78790820 None:intergenic 30.0%
ATGACCTATGACAATTATTG+TGG - Chr8:78789693-78789712 MsG0880046824.01.T01:intron 30.0%
ATGATTATTGCATGGTATAC+TGG - Chr8:78790039-78790058 MsG0880046824.01.T01:intron 30.0%
ATTCGTGTCAAATGAATTTC+TGG + Chr8:78788947-78788966 None:intergenic 30.0%
CAAAAGGAACCAAAAACAAA+AGG + Chr8:78787983-78788002 None:intergenic 30.0%
CAAAGCTGGAAAACTATTTA+GGG + Chr8:78791178-78791197 None:intergenic 30.0%
CAAATCAATGACTACTAAAG+TGG - Chr8:78790203-78790222 MsG0880046824.01.T01:intron 30.0%
CAAATTGCTGGATAAATATC+TGG + Chr8:78791920-78791939 None:intergenic 30.0%
CATACATATAGGCTTCAAAT+AGG + Chr8:78787825-78787844 None:intergenic 30.0%
CATCACTCTAATTGAAACAT+TGG + Chr8:78791573-78791592 None:intergenic 30.0%
CATTCAGAAAAACGAGTTTA+TGG - Chr8:78787757-78787776 MsG0880046824.01.T01:intron 30.0%
CTAGATTTCAAAAAGGAGTT+TGG - Chr8:78789007-78789026 MsG0880046824.01.T01:CDS 30.0%
CTATCCTTGAGTCAAAATAT+AGG + Chr8:78788301-78788320 None:intergenic 30.0%
CTTGTAAAACAGAATGCTAA+AGG - Chr8:78787451-78787470 MsG0880046824.01.T01:intron 30.0%
CTTGTCAATTTGGCAAAATA+GGG + Chr8:78790878-78790897 None:intergenic 30.0%
GAGTTTGAGAAGTGATAAAA+TGG - Chr8:78789119-78789138 MsG0880046824.01.T01:CDS 30.0%
GCTGATAACAGGATTTAAAT+GGG + Chr8:78787640-78787659 None:intergenic 30.0%
GGTTATTAAGCACAAGAAAT+AGG - Chr8:78787325-78787344 MsG0880046824.01.T01:intron 30.0%
GTGATTTCTAATACGAAAAC+AGG - Chr8:78788246-78788265 MsG0880046824.01.T01:intron 30.0%
GTTTCATAGACATCAAAAGA+TGG + Chr8:78786489-78786508 None:intergenic 30.0%
TACAATATTATGGATGCAGA+TGG - Chr8:78788399-78788418 MsG0880046824.01.T01:intron 30.0%
TAGCATAAGCTAATTACACT+TGG + Chr8:78790831-78790850 None:intergenic 30.0%
TATACATGCGTTGAAGTTAT+AGG - Chr8:78789196-78789215 MsG0880046824.01.T01:CDS 30.0%
TCAATAAAAGCTCAAATTGC+TGG + Chr8:78791932-78791951 None:intergenic 30.0%
TGAAACAATTATAGGATGGT+AGG - Chr8:78792386-78792405 MsG0880046824.01.T01:five_prime_UTR 30.0%
TGAAAGATACAGAGATATTG+AGG - Chr8:78791736-78791755 MsG0880046824.01.T01:intron 30.0%
TGACCTATGACAATTATTGT+GGG - Chr8:78789694-78789713 MsG0880046824.01.T01:intron 30.0%
TGCTTAATAACCAACACATT+AGG + Chr8:78787276-78787295 None:intergenic 30.0%
TTAGAAATTCAAACAACGCT+CGG - Chr8:78788198-78788217 MsG0880046824.01.T01:intron 30.0%
TTATCACTTCTCAAACTCAT+GGG + Chr8:78789117-78789136 None:intergenic 30.0%
TTCAATTGAAATCCCCAAAT+AGG + Chr8:78788716-78788735 None:intergenic 30.0%
TTCGTGTCAAATGAATTTCT+GGG + Chr8:78788946-78788965 None:intergenic 30.0%
TTCTGGCAATTTAGATTACT+GGG + Chr8:78791608-78791627 None:intergenic 30.0%
TTGACTTAACAATGTCTTCT+AGG - Chr8:78790481-78790500 MsG0880046824.01.T01:intron 30.0%
TTTATCACTTCTCAAACTCA+TGG + Chr8:78789118-78789137 None:intergenic 30.0%
! AACGTTTTCTACTTGTTTAG+GGG + Chr8:78788809-78788828 None:intergenic 30.0%
! AGTGCTGAAATAATATCCAA+AGG - Chr8:78791503-78791522 MsG0880046824.01.T01:intron 30.0%
! ATCTATGCTACTTGTTGATA+AGG - Chr8:78790312-78790331 MsG0880046824.01.T01:intron 30.0%
! ATTGTGATTTAAGACATCAG+TGG - Chr8:78790505-78790524 MsG0880046824.01.T01:intron 30.0%
!! ACTTCATTAAAGCATTGCAA+AGG - Chr8:78791369-78791388 MsG0880046824.01.T01:five_prime_UTR 30.0%
!! CTTCATTAAAGCATTGCAAA+GGG - Chr8:78791370-78791389 MsG0880046824.01.T01:five_prime_UTR 30.0%
!! TTAGTTTTTCACTGTAGTGT+AGG - Chr8:78788772-78788791 MsG0880046824.01.T01:intron 30.0%
!!! AACATGTTTTTTGTGGCATA+AGG - Chr8:78789840-78789859 MsG0880046824.01.T01:intron 30.0%
!!! CAATTACTGCCTTTTGTTTT+TGG - Chr8:78787971-78787990 MsG0880046824.01.T01:intron 30.0%
!!! TCAACCTATATTTTGACTCA+AGG - Chr8:78788294-78788313 MsG0880046824.01.T01:intron 30.0%
!!! TGAAGCAAACATGTTTTTTG+TGG - Chr8:78789833-78789852 MsG0880046824.01.T01:intron 30.0%
!!! TGTGTTGTTTTTTCAAGAGA+CGG - Chr8:78792077-78792096 MsG0880046824.01.T01:intron 30.0%
AAAAATGTTTCTTGCTTCCC+AGG + Chr8:78792545-78792564 None:intergenic 35.0%
AAAATGTTTCTTGCTTCCCA+GGG + Chr8:78792544-78792563 None:intergenic 35.0%
AAACTAGCATCAAAGCCAAT+TGG + Chr8:78786667-78786686 None:intergenic 35.0%
ACAATAGCAGTAGCAAAGAA+AGG + Chr8:78792334-78792353 None:intergenic 35.0%
ACCTATTGTTTGCCTAAAAC+TGG - Chr8:78789069-78789088 MsG0880046824.01.T01:CDS 35.0%
AGAAACTTGTCTCCTATTTG+GGG - Chr8:78788701-78788720 MsG0880046824.01.T01:CDS 35.0%
AGCCAAATATATCTAGCTGA+AGG - Chr8:78790420-78790439 MsG0880046824.01.T01:intron 35.0%
AGTGATGGTATATGAGGAAA+TGG - Chr8:78790175-78790194 MsG0880046824.01.T01:intron 35.0%
AGTTATGTGCGATTACTTCA+AGG - Chr8:78792132-78792151 MsG0880046824.01.T01:intron 35.0%
ATACAGAAAATTGTCGGTGT+TGG + Chr8:78791795-78791814 None:intergenic 35.0%
ATGATGTAAATCATCATCCC+TGG - Chr8:78787413-78787432 MsG0880046824.01.T01:intron 35.0%
ATGATTCTTGATAGACAGAC+TGG + Chr8:78787395-78787414 None:intergenic 35.0%
ATGCATATCGATACAAGTTC+AGG + Chr8:78787871-78787890 None:intergenic 35.0%
ATTCCAGCATATTCTTGTGT+GGG - Chr8:78789944-78789963 MsG0880046824.01.T01:intron 35.0%
CATCTCATATCAGACATACA+AGG - Chr8:78791971-78791990 MsG0880046824.01.T01:intron 35.0%
CTATGACAATTATTGTGGGA+CGG - Chr8:78789698-78789717 MsG0880046824.01.T01:intron 35.0%
CTTCTGGCAATTTAGATTAC+TGG + Chr8:78791609-78791628 None:intergenic 35.0%
CTTTCTCCATTGTTCAACAA+TGG + Chr8:78790606-78790625 None:intergenic 35.0%
GAAGAAACTTGTCTCCTATT+TGG - Chr8:78788699-78788718 MsG0880046824.01.T01:CDS 35.0%
GAAGTAATCGCACATAACTA+GGG + Chr8:78792131-78792150 None:intergenic 35.0%
GAATTTAACCACAAAGAGCA+AGG + Chr8:78786903-78786922 None:intergenic 35.0%
GGCAAATCTGTATTAACTTC+TGG + Chr8:78791625-78791644 None:intergenic 35.0%
GTAAAAGAAATCTTCACCGA+TGG + Chr8:78792298-78792317 None:intergenic 35.0%
GTAATCCTACACCAAATGTT+CGG + Chr8:78788885-78788904 None:intergenic 35.0%
TAAGGGAGAGAATCAAAACT+TGG - Chr8:78788828-78788847 MsG0880046824.01.T01:intron 35.0%
TACAGATTTGCCAGAAGTTA+AGG - Chr8:78791633-78791652 MsG0880046824.01.T01:intron 35.0%
TACATCTTCATGCATCTGAT+TGG - Chr8:78787491-78787510 MsG0880046824.01.T01:intron 35.0%
TATGATACACACAGTCAATG+TGG + Chr8:78790930-78790949 None:intergenic 35.0%
TATTCCAGCATATTCTTGTG+TGG - Chr8:78789943-78789962 MsG0880046824.01.T01:intron 35.0%
TATTTAGAGAAGAATGGGCA+AGG - Chr8:78791535-78791554 MsG0880046824.01.T01:intron 35.0%
TGAAGTAATCGCACATAACT+AGG + Chr8:78792132-78792151 None:intergenic 35.0%
TGATTCTTGATAGACAGACT+GGG + Chr8:78787394-78787413 None:intergenic 35.0%
TGCTATACTCTAATACTAGG+TGG - Chr8:78790846-78790865 MsG0880046824.01.T01:intron 35.0%
TTATTTGTACAAATGCCGCA+TGG - Chr8:78788440-78788459 MsG0880046824.01.T01:intron 35.0%
TTGAGGAAAATATCTCTGCA+TGG - Chr8:78791753-78791772 MsG0880046824.01.T01:intron 35.0%
! AACACCGACAATTTTCTGTA+TGG - Chr8:78791794-78791813 MsG0880046824.01.T01:intron 35.0%
! AGAGATTCTTTAAAAGACGC+AGG - Chr8:78790357-78790376 MsG0880046824.01.T01:intron 35.0%
! AGTTGCAAAGCCTTTTCTTA+TGG + Chr8:78788348-78788367 None:intergenic 35.0%
! CATGTCAAGCATGCTTTTAA+AGG + Chr8:78787566-78787585 None:intergenic 35.0%
! CTATTTAGGGTATGTTTGGA+TGG + Chr8:78791165-78791184 None:intergenic 35.0%
! TATGTTTGGATGGAGGATTT+TGG + Chr8:78791155-78791174 None:intergenic 35.0%
! TGGTAAATTTTATTCAGCGC+TGG - Chr8:78791397-78791416 MsG0880046824.01.T01:five_prime_UTR 35.0%
! TTTTCTACTTGTTTAGGGGA+GGG + Chr8:78788805-78788824 None:intergenic 35.0%
! TTTTGTCCTTCAGACATAGA+GGG - Chr8:78789219-78789238 MsG0880046824.01.T01:CDS 35.0%
!! AAAAGCATTGAGAGAGTAAG+TGG + Chr8:78789406-78789425 None:intergenic 35.0%
!! AAAGCATTGAGAGAGTAAGT+GGG + Chr8:78789405-78789424 None:intergenic 35.0%
!! CAAGTGAAAGATTTGGTGTT+TGG - Chr8:78791462-78791481 MsG0880046824.01.T01:intron 35.0%
!! TTGCAACTCACGTTTTAGTA+AGG - Chr8:78788360-78788379 MsG0880046824.01.T01:intron 35.0%
!!! ACCAGTTTTAGGCAAACAAT+AGG + Chr8:78789073-78789092 None:intergenic 35.0%
!!! CAAAAAATTTTGATTGCCCG+TGG + Chr8:78786718-78786737 None:intergenic 35.0%
!!! TTTTTTAAAGTGCCCAAGCA+AGG - Chr8:78792561-78792580 MsG0880046824.01.T01:five_prime_UTR 35.0%
AAATGTTTCTTGCTTCCCAG+GGG + Chr8:78792543-78792562 None:intergenic 40.0%
AGAAAACCTTACCTCGTGTT+CGG + Chr8:78791315-78791334 None:intergenic 40.0%
AGAAATCTTCACCGATGGAT+CGG + Chr8:78792293-78792312 None:intergenic 40.0%
CCAGAAATCTCAACCTGATT+TGG - Chr8:78786922-78786941 MsG0880046824.01.T01:CDS 40.0%
CGTCCCACAATAATTGTCAT+AGG + Chr8:78789700-78789719 None:intergenic 40.0%
GAACAATGGAGAAAGCTTGA+AGG - Chr8:78790611-78790630 MsG0880046824.01.T01:five_prime_UTR 40.0%
GAAGGTTTCTCCTTAACTTC+TGG + Chr8:78791646-78791665 None:intergenic 40.0%
GACCTACATTCTAACACCTA+GGG + Chr8:78790581-78790600 None:intergenic 40.0%
GCATCTGGTTGTAAACCAAT+TGG - Chr8:78786649-78786668 MsG0880046824.01.T01:three_prime_UTR 40.0%
GCTGGAGCTAGATTTCAAAA+AGG - Chr8:78789000-78789019 MsG0880046824.01.T01:CDS 40.0%
GCTTCATGCATTTCAGAGAT+TGG - Chr8:78786550-78786569 MsG0880046824.01.T01:three_prime_UTR 40.0%
GCTTGAGTTTAATAGTCCCT+AGG - Chr8:78790562-78790581 MsG0880046824.01.T01:intron 40.0%
GGATTTAAATGGGTCAAGCT+TGG + Chr8:78787630-78787649 None:intergenic 40.0%
GGTAGGTCAAGTGAAAGATT+TGG - Chr8:78791455-78791474 MsG0880046824.01.T01:intron 40.0%
GTTTATGGTGCAACTTCAAC+AGG - Chr8:78787772-78787791 MsG0880046824.01.T01:intron 40.0%
TATTCACGGCTAGATACAGT+TGG + Chr8:78790764-78790783 None:intergenic 40.0%
TCATGATTCTCTACGACTTC+AGG + Chr8:78787737-78787756 None:intergenic 40.0%
TCTATGATTACTAGAGCTGC+TGG - Chr8:78787707-78787726 MsG0880046824.01.T01:intron 40.0%
TCTCACTGTGGGATTTGAAT+TGG - Chr8:78790001-78790020 MsG0880046824.01.T01:intron 40.0%
TGAATGACACACCTGTACAT+AGG + Chr8:78788509-78788528 None:intergenic 40.0%
TGACCTACATTCTAACACCT+AGG + Chr8:78790582-78790601 None:intergenic 40.0%
TGCTGACCATGATTATTGCA+TGG - Chr8:78790031-78790050 MsG0880046824.01.T01:intron 40.0%
TGTCAATGTGTCCGAACATT+TGG - Chr8:78788871-78788890 MsG0880046824.01.T01:intron 40.0%
TTCCTAGGGTTGTCTCATAA+AGG + Chr8:78787114-78787133 None:intergenic 40.0%
TTTAACCTAAGGGTCTGCTT+GGG - Chr8:78790956-78790975 MsG0880046824.01.T01:intron 40.0%
TTTCTACTTGTTTAGGGGAG+GGG + Chr8:78788804-78788823 None:intergenic 40.0%
TTTCTGTTAGCTGTTGTCAC+TGG - Chr8:78789864-78789883 MsG0880046824.01.T01:intron 40.0%
! AGCTTTTCGATTTCTCACTG+TGG - Chr8:78789989-78790008 MsG0880046824.01.T01:intron 40.0%
! GCTTTTCGATTTCTCACTGT+GGG - Chr8:78789990-78790009 MsG0880046824.01.T01:intron 40.0%
! GTTTTCTACTTGTTTAGGGG+AGG + Chr8:78788806-78788825 None:intergenic 40.0%
! GTTTTGTCCTTCAGACATAG+AGG - Chr8:78789218-78789237 MsG0880046824.01.T01:CDS 40.0%
! TCACAAAGTATTCAAGAGCC+TGG + Chr8:78786820-78786839 None:intergenic 40.0%
! TTTAGGGTATGTTTGGATGG+AGG + Chr8:78791162-78791181 None:intergenic 40.0%
!! AAAGCATTGCAAAGGGTGTT+TGG - Chr8:78791377-78791396 MsG0880046824.01.T01:five_prime_UTR 40.0%
!! CCAAATCAGGTTGAGATTTC+TGG + Chr8:78786925-78786944 None:intergenic 40.0%
!! TGAGCTCTAGAAACCAAATC+AGG + Chr8:78786938-78786957 None:intergenic 40.0%
!! TGGAGTGTTGACTTTGTCAT+TGG - Chr8:78787511-78787530 MsG0880046824.01.T01:intron 40.0%
!!! AAAATTTTGATTGCCCGTGG+CGG + Chr8:78786715-78786734 None:intergenic 40.0%
!!! ATTTTTAGTGTTGGTAGCGC+TGG - Chr8:78791420-78791439 MsG0880046824.01.T01:intron 40.0%
!!! GCTGGATTTTTAGTGTTGGT+AGG - Chr8:78791415-78791434 MsG0880046824.01.T01:five_prime_UTR 40.0%
!!! TAGCGCTGGATTTTTAGTGT+TGG - Chr8:78791434-78791453 MsG0880046824.01.T01:intron 40.0%
AAGAAATCTGGTGCTTAGCC+AGG + Chr8:78787434-78787453 None:intergenic 45.0%
ACTCTATTCTGGCAGACTCT+AGG - Chr8:78789912-78789931 MsG0880046824.01.T01:intron 45.0%
AGAAATCTGGTGCTTAGCCA+GGG + Chr8:78787433-78787452 None:intergenic 45.0%
AGAACGGGAAACTCTTTGGT+CGG - Chr8:78787672-78787691 MsG0880046824.01.T01:intron 45.0%
ATACAAGGAATCAACTGCCC+AGG - Chr8:78791986-78792005 MsG0880046824.01.T01:intron 45.0%
ATCCTGTTATCAGCTTCTGC+TGG - Chr8:78787646-78787665 MsG0880046824.01.T01:intron 45.0%
ATGTCTATGAAACGACCCCA+TGG - Chr8:78786496-78786515 MsG0880046824.01.T01:three_prime_UTR 45.0%
CACATAACTAGGGTCTGAAG+GGG + Chr8:78792121-78792140 None:intergenic 45.0%
CTAGAACTTACAGATGCAGC+AGG + Chr8:78790541-78790560 None:intergenic 45.0%
CTGCTCATTGAACCCATCAT+TGG - Chr8:78786871-78786890 MsG0880046824.01.T01:CDS 45.0%
CTTGCAGTGCAAGCTATTCA+CGG + Chr8:78790778-78790797 None:intergenic 45.0%
CTTTAACCTAAGGGTCTGCT+TGG - Chr8:78790955-78790974 MsG0880046824.01.T01:intron 45.0%
CTTTCTTAGAGCTAGTGCTC+CGG - Chr8:78786594-78786613 MsG0880046824.01.T01:three_prime_UTR 45.0%
GAAATCTTCACCGATGGATC+GGG + Chr8:78792292-78792311 None:intergenic 45.0%
GATATGAGATGCCATCAGGA+AGG + Chr8:78791962-78791981 None:intergenic 45.0%
GCAACGAAATAGCGAAGCAA+TGG + Chr8:78787544-78787563 None:intergenic 45.0%
GCACATAACTAGGGTCTGAA+GGG + Chr8:78792122-78792141 None:intergenic 45.0%
GCAGAGTAGAATGAAGGATC+AGG + Chr8:78788979-78788998 None:intergenic 45.0%
GGGTGGAAGAGCAAACTTAT+TGG - Chr8:78789964-78789983 MsG0880046824.01.T01:intron 45.0%
GGTAGGAGCGAATGCTTATT+TGG - Chr8:78792403-78792422 MsG0880046824.01.T01:five_prime_UTR 45.0%
GGTCAGCCATTGTTGAACAA+TGG - Chr8:78790597-78790616 MsG0880046824.01.T01:five_prime_UTR 45.0%
GTCCCTAGGTGTTAGAATGT+AGG - Chr8:78790576-78790595 MsG0880046824.01.T01:intron 45.0%
GTCTGATATGAGATGCCATC+AGG + Chr8:78791966-78791985 None:intergenic 45.0%
TACTCACAGAGAAGTTAGCC+TGG + Chr8:78792007-78792026 None:intergenic 45.0%
TAGATACAGTTGGCAACAGC+TGG + Chr8:78790754-78790773 None:intergenic 45.0%
TCTAGCTGAAGGTTTAGGCA+TGG - Chr8:78790431-78790450 MsG0880046824.01.T01:intron 45.0%
TGCCTTTATGAGACAACCCT+AGG - Chr8:78787109-78787128 MsG0880046824.01.T01:CDS 45.0%
TGGGAACACTTCAAACAACG+AGG - Chr8:78789027-78789046 MsG0880046824.01.T01:CDS 45.0%
TGGGGAAAATGCTACAAGAC+TGG - Chr8:78788476-78788495 MsG0880046824.01.T01:intron 45.0%
TTCTACTTGTTTAGGGGAGG+GGG + Chr8:78788803-78788822 None:intergenic 45.0%
TTGAAAGCTTGCCTTCCTGA+TGG - Chr8:78791948-78791967 MsG0880046824.01.T01:intron 45.0%
TTGCCATGACAGTCATTTCC+CGG - Chr8:78792257-78792276 MsG0880046824.01.T01:five_prime_UTR 45.0%
TTGCCTTACACTCCTTGCTT+GGG + Chr8:78792576-78792595 None:intergenic 45.0%
TTTCCACCCTCTATGTCTGA+AGG + Chr8:78789228-78789247 None:intergenic 45.0%
! ACTCACAGAGAAGTTAGCCT+GGG + Chr8:78792006-78792025 None:intergenic 45.0%
! GAACACGAGGTAAGGTTTTC+TGG - Chr8:78791314-78791333 MsG0880046824.01.T01:intron 45.0%
! TCTAGATGCTAGCTGCTTTG+AGG - Chr8:78791249-78791268 MsG0880046824.01.T01:intron 45.0%
!! CAATGATGGGTTCAATGAGC+AGG + Chr8:78786873-78786892 None:intergenic 45.0%
!! GGTTTCTAGAGCTCATCTTC+AGG - Chr8:78786943-78786962 MsG0880046824.01.T01:CDS 45.0%
!! TGTGTCCGAACATTTGGTGT+AGG - Chr8:78788877-78788896 MsG0880046824.01.T01:intron 45.0%
!! TTGCAGAGAAGAAGCATCTC+CGG - Chr8:78790087-78790106 MsG0880046824.01.T01:five_prime_UTR 45.0%
!!! ATGGAGGATTTTGGAGCAGA+AGG + Chr8:78791146-78791165 None:intergenic 45.0%
!!! CAGCGCTGGATTTTTAGTGT+TGG - Chr8:78791411-78791430 MsG0880046824.01.T01:five_prime_UTR 45.0%
!!! TGGAGGATTTTGGAGCAGAA+GGG + Chr8:78791145-78791164 None:intergenic 45.0%
AACTCCAAACCTCCTCCATG+GGG + Chr8:78786514-78786533 None:intergenic 50.0%
AATGGGCAAGGTCACGCTAT+TGG - Chr8:78791547-78791566 MsG0880046824.01.T01:intron 50.0%
AGCAAGGCAGCTTCCAATGA+TGG + Chr8:78786887-78786906 None:intergenic 50.0%
AGCCATCATGTCAGGGTCAT+TGG + Chr8:78792197-78792216 None:intergenic 50.0%
ATGACAGTCATTTCCCGGCT+AGG - Chr8:78792262-78792281 MsG0880046824.01.T01:five_prime_UTR 50.0%
CAACTCCAAACCTCCTCCAT+GGG + Chr8:78786515-78786534 None:intergenic 50.0%
CCACCCACACAAGAATATGC+TGG + Chr8:78789950-78789969 None:intergenic 50.0%
CCAGCATATTCTTGTGTGGG+TGG - Chr8:78789947-78789966 MsG0880046824.01.T01:intron 50.0%
CCAGCTGCAGAGTAGAATGA+AGG + Chr8:78788985-78789004 None:intergenic 50.0%
CCTTCATTCTACTCTGCAGC+TGG - Chr8:78788982-78789001 MsG0880046824.01.T01:CDS 50.0%
CGCACATAACTAGGGTCTGA+AGG + Chr8:78792123-78792142 None:intergenic 50.0%
GACCAAAGAGTTTCCCGTTC+TGG + Chr8:78787673-78787692 None:intergenic 50.0%
GACCAGCAGAAGCTGATAAC+AGG + Chr8:78787651-78787670 None:intergenic 50.0%
GCAAGGCAGCTTCCAATGAT+GGG + Chr8:78786886-78786905 None:intergenic 50.0%
GTACAAATGCCGCATGGCAA+AGG - Chr8:78788446-78788465 MsG0880046824.01.T01:intron 50.0%
GTCCAGAACGGGAAACTCTT+TGG - Chr8:78787668-78787687 MsG0880046824.01.T01:intron 50.0%
GTTGCCTTACACTCCTTGCT+TGG + Chr8:78792577-78792596 None:intergenic 50.0%
TAGCCGGGAAATGACTGTCA+TGG + Chr8:78792263-78792282 None:intergenic 50.0%
TCAGCTCAGCCATCATGTCA+GGG + Chr8:78792204-78792223 None:intergenic 50.0%
TCTATGAAACGACCCCATGG+AGG - Chr8:78786499-78786518 MsG0880046824.01.T01:three_prime_UTR 50.0%
TGTCCTTCAGACATAGAGGG+TGG - Chr8:78789222-78789241 MsG0880046824.01.T01:CDS 50.0%
! ACCTCGTGTTCGGTACTGAA+AGG + Chr8:78791305-78791324 None:intergenic 50.0%
! AGGAGGTTTGGAGTTGGCAA+GGG - Chr8:78786519-78786538 MsG0880046824.01.T01:three_prime_UTR 50.0%
! CCTCGTGTTCGGTACTGAAA+GGG + Chr8:78791304-78791323 None:intergenic 50.0%
! CTCTGAAGAAACCTCACAGC+TGG + Chr8:78790402-78790421 None:intergenic 50.0%
! GTACTGAAAGGGCTTTGTGG+TGG + Chr8:78791293-78791312 None:intergenic 50.0%
! TCAGTACCGAACACGAGGTA+AGG - Chr8:78791306-78791325 MsG0880046824.01.T01:intron 50.0%
! TCGGTACTGAAAGGGCTTTG+TGG + Chr8:78791296-78791315 None:intergenic 50.0%
!! AGAGAAGAAGCATCTCCGGA+TGG - Chr8:78790091-78790110 MsG0880046824.01.T01:five_prime_UTR 50.0%
!! TTTGGAGAGGAGGGTTTTGG+AGG - Chr8:78790984-78791003 MsG0880046824.01.T01:intron 50.0%
!!! AGGATTTTGGAGCAGAAGGG+AGG + Chr8:78791142-78791161 None:intergenic 50.0%
!!! GATTTTGGAGCAGAAGGGAG+GGG + Chr8:78791140-78791159 None:intergenic 50.0%
!!! GGATTTTGGAGCAGAAGGGA+GGG + Chr8:78791141-78791160 None:intergenic 50.0%
!!! GGTTTTGGAGAGGAGGGTTT+TGG - Chr8:78790981-78791000 MsG0880046824.01.T01:intron 50.0%
!!! TTGGAGAGGAGGGTTTTGGA+GGG - Chr8:78790985-78791004 MsG0880046824.01.T01:intron 50.0%
ACCAGCTGTCATGCTAGCAC+AGG + Chr8:78790720-78790739 None:intergenic 55.0%
ACCCTCAACCTCAGCAACAG+TGG - Chr8:78791820-78791839 MsG0880046824.01.T01:intron 55.0%
ACCTAAGGGTCTGCTTGGGA+CGG - Chr8:78790960-78790979 MsG0880046824.01.T01:intron 55.0%
AGCTTCTGCTGGTCCAGAAC+GGG - Chr8:78787657-78787676 MsG0880046824.01.T01:intron 55.0%
ATGAAACGACCCCATGGAGG+AGG - Chr8:78786502-78786521 MsG0880046824.01.T01:three_prime_UTR 55.0%
ATGGATCGGGTGTTCCTAGC+CGG + Chr8:78792279-78792298 None:intergenic 55.0%
ATGGCAATGAGCAGTGGCAC+TGG - Chr8:78790110-78790129 MsG0880046824.01.T01:five_prime_UTR 55.0%
CAGCTTACGCCTTTGCCATG+CGG + Chr8:78788458-78788477 None:intergenic 55.0%
CAGCTTCTGCTGGTCCAGAA+CGG - Chr8:78787656-78787675 MsG0880046824.01.T01:intron 55.0%
CATAGTGCCCACTGTTGCTG+AGG + Chr8:78791831-78791850 None:intergenic 55.0%
CCAACTCCAAACCTCCTCCA+TGG + Chr8:78786516-78786535 None:intergenic 55.0%
CCAGCTGTCATGCTAGCACA+GGG + Chr8:78790719-78790738 None:intergenic 55.0%
CCCACTGTTGCTGAGGTTGA+GGG + Chr8:78791824-78791843 None:intergenic 55.0%
CCCTCAACCTCAGCAACAGT+GGG - Chr8:78791821-78791840 MsG0880046824.01.T01:intron 55.0%
CGCCAATGACCCTGACATGA+TGG - Chr8:78792192-78792211 MsG0880046824.01.T01:five_prime_UTR 55.0%
CTCAGCTCAGCCATCATGTC+AGG + Chr8:78792205-78792224 None:intergenic 55.0%
CTGACATGATGGCTGAGCTG+AGG - Chr8:78792203-78792222 MsG0880046824.01.T01:five_prime_UTR 55.0%
CTGGCGTGTCACCTATGTAC+AGG - Chr8:78788495-78788514 MsG0880046824.01.T01:intron 55.0%
GCTAGGAACACCCGATCCAT+CGG - Chr8:78792279-78792298 MsG0880046824.01.T01:intron 55.0%
GGAAGCTGCCTTGCTCTTTG+TGG - Chr8:78786892-78786911 MsG0880046824.01.T01:CDS 55.0%
TATCAGCTCCAACACCGCCA+CGG - Chr8:78786698-78786717 MsG0880046824.01.T01:three_prime_UTR 55.0%
TGCAGATCTCTCCAGCTGTG+AGG - Chr8:78790388-78790407 MsG0880046824.01.T01:intron 55.0%
TGCCACTGCTCATTGCCATC+CGG + Chr8:78790109-78790128 None:intergenic 55.0%
! CATGGCAAAGGCGTAAGCTG+GGG - Chr8:78788458-78788477 MsG0880046824.01.T01:intron 55.0%
! CCATGGAGGAGGTTTGGAGT+TGG - Chr8:78786513-78786532 MsG0880046824.01.T01:three_prime_UTR 55.0%
! CCCTTTCAGTACCGAACACG+AGG - Chr8:78791301-78791320 MsG0880046824.01.T01:intron 55.0%
! GAGGAGGTTTGGAGTTGGCA+AGG - Chr8:78786518-78786537 MsG0880046824.01.T01:three_prime_UTR 55.0%
! GCATGGCAAAGGCGTAAGCT+GGG - Chr8:78788457-78788476 MsG0880046824.01.T01:intron 55.0%
! GTGCCCAAGCAAGGAGTGTA+AGG - Chr8:78792570-78792589 MsG0880046824.01.T01:five_prime_UTR 55.0%
! TTCCTTCATTGGCTGCCCCT+GGG - Chr8:78792525-78792544 MsG0880046824.01.T01:five_prime_UTR 55.0%
! TTTCCTTCATTGGCTGCCCC+TGG - Chr8:78792524-78792543 MsG0880046824.01.T01:five_prime_UTR 55.0%
!!! TGCTTGGGACGGTTTTGGAG+AGG - Chr8:78790971-78790990 MsG0880046824.01.T01:intron 55.0%
!!! TGGGACGGTTTTGGAGAGGA+GGG - Chr8:78790975-78790994 MsG0880046824.01.T01:intron 55.0%
!!! TTGGGACGGTTTTGGAGAGG+AGG - Chr8:78790974-78790993 MsG0880046824.01.T01:intron 55.0%
ACCGTCCCAAGCAGACCCTT+AGG + Chr8:78790964-78790983 None:intergenic 60.0%
ACGACCCCATGGAGGAGGTT+TGG - Chr8:78786507-78786526 MsG0880046824.01.T01:three_prime_UTR 60.0%
ATCAGCTCCAACACCGCCAC+GGG - Chr8:78786699-78786718 MsG0880046824.01.T01:three_prime_UTR 60.0%
CCCTGTGCTAGCATGACAGC+TGG - Chr8:78790716-78790735 MsG0880046824.01.T01:intron 60.0%
CTCCGGATGGCAATGAGCAG+TGG - Chr8:78790104-78790123 MsG0880046824.01.T01:five_prime_UTR 60.0%
GCCCACTGTTGCTGAGGTTG+AGG + Chr8:78791825-78791844 None:intergenic 60.0%
TGGATCGGGTGTTCCTAGCC+GGG + Chr8:78792278-78792297 None:intergenic 60.0%
TTCCCAGGGGCAGCCAATGA+AGG + Chr8:78792530-78792549 None:intergenic 60.0%
TTGATTGCCCGTGGCGGTGT+TGG + Chr8:78786709-78786728 None:intergenic 60.0%
TTGGAGCAGAAGGGAGGGGA+GGG + Chr8:78791136-78791155 None:intergenic 60.0%
! CGCATGGCAAAGGCGTAAGC+TGG - Chr8:78788456-78788475 MsG0880046824.01.T01:intron 60.0%
! GGGTCTGCTTGGGACGGTTT+TGG - Chr8:78790966-78790985 MsG0880046824.01.T01:intron 60.0%
! TTTGGAGCAGAAGGGAGGGG+AGG + Chr8:78791137-78791156 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 78786463 78792648 78786463 ID=MsG0880046824.01;Name=MsG0880046824.01
Chr8 mRNA 78786463 78792648 78786463 ID=MsG0880046824.01.T01;Parent=MsG0880046824.01;Name=MsG0880046824.01.T01;_AED=0.45;_eAED=0.48;_QI=777|0.6|0.45|1|0.7|0.63|11|282|268
Chr8 exon 78786463 78786984 78786463 ID=MsG0880046824.01.T01:exon:18936;Parent=MsG0880046824.01.T01
Chr8 exon 78787092 78787190 78787092 ID=MsG0880046824.01.T01:exon:18935;Parent=MsG0880046824.01.T01
Chr8 exon 78787789 78787857 78787789 ID=MsG0880046824.01.T01:exon:18934;Parent=MsG0880046824.01.T01
Chr8 exon 78788659 78788777 78788659 ID=MsG0880046824.01.T01:exon:18933;Parent=MsG0880046824.01.T01
Chr8 exon 78788980 78789249 78788980 ID=MsG0880046824.01.T01:exon:18932;Parent=MsG0880046824.01.T01
Chr8 exon 78789310 78789343 78789310 ID=MsG0880046824.01.T01:exon:18931;Parent=MsG0880046824.01.T01
Chr8 exon 78790063 78790163 78790063 ID=MsG0880046824.01.T01:exon:18930;Parent=MsG0880046824.01.T01
Chr8 exon 78790591 78790693 78790591 ID=MsG0880046824.01.T01:exon:18929;Parent=MsG0880046824.01.T01
Chr8 exon 78791318 78791437 78791318 ID=MsG0880046824.01.T01:exon:18928;Parent=MsG0880046824.01.T01
Chr8 exon 78792147 78792290 78792147 ID=MsG0880046824.01.T01:exon:18927;Parent=MsG0880046824.01.T01
Chr8 exon 78792364 78792648 78792364 ID=MsG0880046824.01.T01:exon:18926;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78792364 78792648 78792364 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78792147 78792290 78792147 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78791318 78791437 78791318 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78790591 78790693 78790591 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78790063 78790163 78790063 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 five_prime_UTR 78789320 78789343 78789320 ID=MsG0880046824.01.T01:five_prime_utr;Parent=MsG0880046824.01.T01
Chr8 CDS 78789310 78789319 78789310 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 CDS 78788980 78789249 78788980 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 CDS 78788659 78788777 78788659 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 CDS 78787789 78787857 78787789 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 CDS 78787092 78787190 78787092 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 CDS 78786745 78786984 78786745 ID=MsG0880046824.01.T01:cds;Parent=MsG0880046824.01.T01
Chr8 three_prime_UTR 78786463 78786744 78786463 ID=MsG0880046824.01.T01:three_prime_utr;Parent=MsG0880046824.01.T01
Gene Sequence

>MsG0880046824.01.T01

ATGAATCACGGTTTTCTGTTAGCTGTTGTCACTGGAACTAATTCATTAATATGTAATATTACTCTATTCTGGCAGACTCTAGGCTTCAAAATATTCCAGCATATTCTTGTGTGGGTGGAAGAGCAAACTTATTGGATAGCTTTTCGATTTCTCACTGTGGGATTTGAATTGGAACTCTATGCTGACCATGATTATTGCATGGTATACTGGTATATTTATATCGTGTTGATCAATCTTGCAGAGAAGAAGCATCTCCGGATGGCAATGAGCAGTGGCACTGGTAAAAAGAAGACAAAGAAAAAAAGAGATTCTTTAAAAGACGCAGGAACGAACTTGCAGATCTCTCCAGCTGTGAGGTTTCTTCAGAGCCAAATATATCTAGCTGAAGGTTTAGGCATGATGCTAGCTGCTTTGAGGAATGAGCACAGAATTGTTCCACCACAAAGCCCTTTCAGTACCGAACACGAGATATTTATCCAGCAATTTGAGCTTTTATTGAAAGCTTGCCTTCCTGATGGCATCTCATATCAGACATACAAGGAATCAACTGCCCAGGCTAACTTCTCTACCCTAGTTATGTGCGATTACTTCAAGGAAGCTCAGAAGATTGCAAAAGAGTTGAAAGGCAGTTTCGCCAATGACCCTGACATGATGGCTGAGCTGAGGAGAATAGAACAAGTAGCAGAACGCAACAACATTGCCATGACAGTCATTTCCCGGCTAGGAACACCCGATCCATCGGTGAAGATTTCTTTTACACTATGTCATCATCCTTTCTTTGCTACTGCTATTGTGAAGAGATCTTGA
Protein sequence

>MsG0880046824.01.T01

MNHGFLLAVVTGTNSLICNITLFWQTLGFKIFQHILVWVEEQTYWIAFRFLTVGFELELYADHDYCMVYWYIYIVLINLAEKKHLRMAMSSGTGKKKTKKKRDSLKDAGTNLQISPAVRFLQSQIYLAEGLGMMLAALRNEHRIVPPQSPFSTEHEIFIQQFELLLKACLPDGISYQTYKESTAQANFSTLVMCDYFKEAQKIAKELKGSFANDPDMMAELRRIEQVAERNNIAMTVISRLGTPDPSVKISFTLCHHPFFATAIVKRS*