AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046855.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046855.01.T01 MTR_4g116010 96.296 351 13 0 1 351 1 351 0.0 700
MsG0880046855.01.T01 MTR_4g115990 72.168 309 64 4 35 341 32 320 8.38e-153 432
MsG0880046855.01.T01 MTR_3g117420 50.000 342 163 3 15 348 13 354 6.82e-118 345
MsG0880046855.01.T01 MTR_8g074050 49.415 342 165 3 15 348 13 354 3.03e-117 343
MsG0880046855.01.T01 MTR_8g074070 48.246 342 169 3 15 348 13 354 7.94e-113 332
MsG0880046855.01.T01 MTR_8g074070 47.661 342 152 4 15 348 13 335 2.76e-106 315
MsG0880046855.01.T01 MTR_3g117485 44.713 331 171 5 10 329 6 335 1.83e-98 295
MsG0880046855.01.T01 MTR_3g117485 48.627 255 128 2 77 329 10 263 4.66e-88 266
MsG0880046855.01.T01 MTR_7g063730 38.562 306 181 4 50 350 64 367 1.66e-73 232
MsG0880046855.01.T01 MTR_7g062550 38.810 353 194 10 12 350 19 363 2.65e-73 232
MsG0880046855.01.T01 MTR_7g062570 37.971 345 204 7 12 348 14 356 1.20e-70 224
MsG0880046855.01.T01 MTR_2g437380 38.835 309 177 5 50 348 50 356 2.67e-70 224
MsG0880046855.01.T01 MTR_3g026150 37.304 319 190 5 16 327 23 338 4.68e-69 220
MsG0880046855.01.T01 MTR_0009s0050 36.364 341 209 5 16 350 12 350 2.30e-68 218
MsG0880046855.01.T01 MTR_0009s0050 36.364 341 209 5 16 350 12 350 3.74e-68 218
MsG0880046855.01.T01 MTR_7g062580 38.869 283 169 3 50 330 55 335 1.33e-67 217
MsG0880046855.01.T01 MTR_2g072910 36.842 342 204 6 16 348 16 354 1.44e-67 216
MsG0880046855.01.T01 MTR_5g055900 34.412 340 213 5 16 348 12 348 2.97e-67 216
MsG0880046855.01.T01 MTR_5g055680 34.604 341 213 5 17 350 13 350 4.61e-67 215
MsG0880046855.01.T01 MTR_7g062600 36.158 354 203 11 12 350 10 355 8.29e-67 214
MsG0880046855.01.T01 MTR_5g048570 34.971 346 205 7 16 350 12 348 2.46e-66 213
MsG0880046855.01.T01 MTR_5g048550 35.380 342 213 5 16 351 12 351 2.48e-66 213
MsG0880046855.01.T01 MTR_7g068650 37.288 295 176 3 36 322 41 334 3.02e-66 213
MsG0880046855.01.T01 MTR_2g072890 35.277 343 209 5 16 348 16 355 4.26e-66 213
MsG0880046855.01.T01 MTR_5g055820 35.077 325 207 3 28 348 25 349 4.57e-66 213
MsG0880046855.01.T01 MTR_5g048740 36.103 349 208 8 13 351 7 350 5.27e-65 210
MsG0880046855.01.T01 MTR_0009s0480 34.493 345 216 5 13 350 8 349 1.19e-64 209
MsG0880046855.01.T01 MTR_5g048850 33.131 329 213 4 28 351 25 351 7.59e-64 207
MsG0880046855.01.T01 MTR_4g015790 36.218 312 184 3 26 322 31 342 1.88e-63 206
MsG0880046855.01.T01 MTR_5g048470 36.218 312 189 5 44 348 47 355 3.71e-63 205
MsG0880046855.01.T01 MTR_0328s0030 34.694 343 214 5 13 348 7 346 7.04e-63 204
MsG0880046855.01.T01 MTR_7g045650 42.797 236 132 2 50 283 60 294 1.69e-62 202
MsG0880046855.01.T01 MTR_2g437380 39.773 264 153 4 89 348 1 262 1.72e-62 201
MsG0880046855.01.T01 MTR_8g064200 35.065 308 190 5 50 350 52 356 3.90e-62 202
MsG0880046855.01.T01 MTR_8g064200 35.065 308 190 5 50 350 57 361 6.08e-62 202
MsG0880046855.01.T01 MTR_5g055690 35.174 344 206 7 16 348 12 349 9.57e-62 201
MsG0880046855.01.T01 MTR_3g070860 36.879 282 171 2 48 322 48 329 9.79e-62 201
MsG0880046855.01.T01 MTR_5g059130 37.943 282 167 5 50 326 44 322 9.63e-61 198
MsG0880046855.01.T01 MTR_5g055800 33.718 347 217 8 13 351 9 350 1.01e-60 199
MsG0880046855.01.T01 MTR_1g033810 35.889 287 179 2 43 325 40 325 5.12e-59 194
MsG0880046855.01.T01 MTR_3g026150 39.655 232 139 1 96 327 5 235 6.59e-59 191
MsG0880046855.01.T01 MTR_5g082750 35.000 280 175 3 50 322 49 328 7.63e-58 191
MsG0880046855.01.T01 MTR_3g092890 37.091 275 170 3 50 323 38 310 1.57e-57 190
MsG0880046855.01.T01 MTR_5g011250 33.443 305 186 8 28 319 26 326 2.52e-57 190
MsG0880046855.01.T01 MTR_3g072820 33.557 298 193 4 39 333 31 326 7.37e-57 188
MsG0880046855.01.T01 MTR_5g059140 37.500 280 159 6 50 319 42 315 1.51e-56 187
MsG0880046855.01.T01 MTR_3g063180 36.964 303 174 9 50 339 42 340 3.48e-56 187
MsG0880046855.01.T01 MTR_0009s0050 36.653 251 154 3 103 350 4 252 2.14e-54 179
MsG0880046855.01.T01 MTR_0009s0050 36.653 251 154 3 103 350 4 252 3.00e-54 179
MsG0880046855.01.T01 MTR_2g025120 35.662 272 163 6 50 316 4 268 4.53e-54 180
MsG0880046855.01.T01 MTR_5g032880 37.584 298 168 7 50 339 38 325 7.04e-53 185
MsG0880046855.01.T01 MTR_5g032880 36.552 290 165 6 50 326 376 659 1.42e-48 174
MsG0880046855.01.T01 MTR_5g032870 37.153 288 162 6 50 324 38 319 1.42e-52 177
MsG0880046855.01.T01 MTR_7g062560 34.304 309 180 8 50 350 62 355 6.88e-52 176
MsG0880046855.01.T01 MTR_2g072910 36.842 266 158 5 16 274 16 278 4.63e-51 171
MsG0880046855.01.T01 MTR_3g026150 35.741 263 159 5 16 271 23 282 1.15e-50 171
MsG0880046855.01.T01 MTR_3g072810 31.212 330 212 7 15 336 4 326 3.21e-49 168
MsG0880046855.01.T01 MTR_0056s0160 35.865 237 145 3 118 350 2 235 3.71e-49 165
MsG0880046855.01.T01 MTR_3g088565 33.808 281 172 3 48 321 1 274 3.77e-49 167
MsG0880046855.01.T01 MTR_0009s0480 35.227 264 163 4 13 271 8 268 1.48e-48 164
MsG0880046855.01.T01 MTR_5g048850 33.468 248 160 3 28 272 25 270 2.73e-48 164
MsG0880046855.01.T01 MTR_1g070135 32.595 316 188 8 50 351 38 342 2.96e-48 166
MsG0880046855.01.T01 MTR_7g102820 35.161 310 176 7 50 340 67 370 5.49e-48 166
MsG0880046855.01.T01 MTR_8g024120 35.612 278 172 5 50 323 42 316 7.54e-48 165
MsG0880046855.01.T01 MTR_5g055690 34.717 265 158 5 16 271 12 270 2.03e-47 162
MsG0880046855.01.T01 MTR_3g083370 32.258 279 174 7 50 320 4 275 2.38e-45 157
MsG0880046855.01.T01 MTR_5g065010 32.797 311 186 8 28 325 17 317 2.87e-45 158
MsG0880046855.01.T01 MTR_1g062110 34.266 286 175 6 50 325 66 348 6.52e-45 158
MsG0880046855.01.T01 MTR_7g081710 31.532 333 204 10 27 348 32 351 2.21e-44 156
MsG0880046855.01.T01 MTR_1g070085 33.333 300 179 7 50 338 37 326 2.32e-44 155
MsG0880046855.01.T01 MTR_1g070085 33.333 300 179 7 50 338 37 326 2.32e-44 155
MsG0880046855.01.T01 MTR_6g015950 31.058 293 195 5 50 339 39 327 6.89e-44 154
MsG0880046855.01.T01 MTR_2g102570 31.615 291 187 6 41 325 44 328 2.10e-43 154
MsG0880046855.01.T01 MTR_4g093840 33.968 315 184 8 49 348 61 366 2.48e-43 154
MsG0880046855.01.T01 MTR_1g034140 36.570 309 167 10 50 334 27 330 3.98e-43 152
MsG0880046855.01.T01 MTR_3g091350 31.190 311 196 7 50 349 59 362 6.49e-43 152
MsG0880046855.01.T01 MTR_1g070120 30.794 315 195 7 50 351 38 342 1.98e-42 150
MsG0880046855.01.T01 MTR_8g075890 34.274 248 159 3 66 311 60 305 2.84e-42 151
MsG0880046855.01.T01 MTR_4g087090 33.993 303 168 8 50 329 30 323 4.93e-42 150
MsG0880046855.01.T01 MTR_5g022020 32.342 269 173 4 50 311 39 305 5.46e-42 150
MsG0880046855.01.T01 MTR_1g034120 33.660 306 172 10 50 329 26 326 7.84e-42 149
MsG0880046855.01.T01 MTR_8g033380 31.164 292 177 5 50 324 54 338 1.23e-41 149
MsG0880046855.01.T01 MTR_8g075830 33.829 269 169 4 50 311 39 305 1.47e-41 149
MsG0880046855.01.T01 MTR_2g068840 31.861 317 188 9 50 348 55 361 2.72e-41 148
MsG0880046855.01.T01 MTR_5g085330 30.986 284 181 6 47 322 2 278 3.24e-41 147
MsG0880046855.01.T01 MTR_1g034060 33.007 306 174 10 50 329 26 326 5.67e-41 147
MsG0880046855.01.T01 MTR_3g043900 33.433 335 198 9 28 348 30 353 1.20e-40 146
MsG0880046855.01.T01 MTR_2g025120 33.921 227 138 6 50 271 4 223 1.43e-40 142
MsG0880046855.01.T01 MTR_3g091360 31.469 286 180 6 50 326 52 330 1.72e-40 146
MsG0880046855.01.T01 MTR_1g048940 31.561 301 182 10 64 351 64 353 1.76e-40 146
MsG0880046855.01.T01 MTR_4g087110 34.211 304 171 8 50 329 26 324 2.40e-40 145
MsG0880046855.01.T01 MTR_8g009090 31.930 285 176 8 50 323 60 337 2.73e-40 145
MsG0880046855.01.T01 MTR_3g058610 31.048 248 167 3 66 311 60 305 4.68e-40 145
MsG0880046855.01.T01 MTR_3g045230 32.845 341 193 11 28 348 30 354 8.76e-40 144
MsG0880046855.01.T01 MTR_8g009160 30.272 294 187 8 41 323 51 337 3.12e-39 143
MsG0880046855.01.T01 MTR_8g028435 30.464 302 189 8 50 340 60 351 5.47e-39 142
MsG0880046855.01.T01 MTR_8g009170 30.671 313 197 10 50 348 60 366 1.12e-38 141
MsG0880046855.01.T01 MTR_1g093110 30.100 299 185 7 41 325 61 349 1.40e-38 141
MsG0880046855.01.T01 MTR_7g102720 32.335 334 201 10 31 348 11 335 1.66e-38 140
MsG0880046855.01.T01 MTR_2g069010 31.068 309 194 7 39 334 58 360 2.26e-38 141
MsG0880046855.01.T01 MTR_0009s0050 38.372 172 101 3 182 350 1 170 2.75e-38 135
MsG0880046855.01.T01 MTR_4g087100 34.266 286 158 8 64 329 49 324 6.13e-38 139
MsG0880046855.01.T01 MTR_6g464620 28.223 287 189 5 50 322 64 347 6.15e-38 140
MsG0880046855.01.T01 MTR_1g043775 31.773 299 186 9 50 338 54 344 7.08e-38 139
MsG0880046855.01.T01 MTR_2g068950 30.794 315 185 9 40 334 53 354 7.86e-38 139
MsG0880046855.01.T01 MTR_1g011580 30.488 328 211 10 5 328 22 336 8.53e-38 139
MsG0880046855.01.T01 MTR_1g070085 37.561 205 124 4 134 338 48 248 1.24e-37 136
MsG0880046855.01.T01 MTR_1g102070 29.861 288 187 5 48 322 57 342 1.61e-37 138
MsG0880046855.01.T01 MTR_8g009110 31.228 285 179 8 50 323 60 338 1.85e-37 138
MsG0880046855.01.T01 MTR_1g070100 38.220 191 115 3 134 324 44 231 4.60e-37 134
MsG0880046855.01.T01 MTR_4g087140 32.890 301 175 9 50 326 26 323 6.15e-37 136
MsG0880046855.01.T01 MTR_1g070080 33.455 275 162 7 50 313 38 302 1.44e-36 135
MsG0880046855.01.T01 MTR_2g069060 31.429 315 200 8 43 348 42 349 1.52e-36 135
MsG0880046855.01.T01 MTR_8g008930 30.450 289 176 8 50 323 60 338 1.56e-36 135
MsG0880046855.01.T01 MTR_2g069300 29.866 298 194 6 38 325 41 333 1.59e-36 135
MsG0880046855.01.T01 MTR_7g016090 28.521 284 196 4 45 325 34 313 1.71e-36 135
MsG0880046855.01.T01 MTR_7g016090 28.521 284 196 4 45 325 36 315 1.80e-36 135
MsG0880046855.01.T01 MTR_8g041620 30.960 323 203 8 40 348 58 374 8.83e-36 134
MsG0880046855.01.T01 MTR_2g069090 31.169 308 190 9 26 323 50 345 1.10e-35 133
MsG0880046855.01.T01 MTR_7g056347 31.488 289 178 9 50 325 67 348 1.81e-35 133
MsG0880046855.01.T01 MTR_1g093120 29.831 295 190 8 41 325 58 345 2.22e-35 132
MsG0880046855.01.T01 MTR_2g068960 29.430 316 190 9 39 334 52 354 2.24e-35 132
MsG0880046855.01.T01 MTR_4g087120 32.558 301 175 8 50 326 26 322 2.56e-35 132
MsG0880046855.01.T01 MTR_2g069020 32.226 301 178 10 40 325 57 346 4.15e-35 132
MsG0880046855.01.T01 MTR_2g069020 32.226 301 178 10 40 325 57 346 5.00e-35 132
MsG0880046855.01.T01 MTR_8g041600 29.358 327 203 8 40 348 58 374 6.04e-35 132
MsG0880046855.01.T01 MTR_2g069190 29.870 308 195 8 40 335 58 356 7.76e-35 131
MsG0880046855.01.T01 MTR_6g092620 29.818 275 177 5 48 314 1 267 8.58e-35 129
MsG0880046855.01.T01 MTR_2g083030 31.879 298 175 9 50 330 37 323 9.35e-35 130
MsG0880046855.01.T01 MTR_1g093140 29.667 300 180 9 43 324 66 352 1.09e-34 131
MsG0880046855.01.T01 MTR_2g069210 30.195 308 192 8 26 323 46 340 1.26e-34 130
MsG0880046855.01.T01 MTR_8g063070 27.667 300 198 8 36 323 54 346 1.40e-34 130
MsG0880046855.01.T01 MTR_8g062600 28.328 293 192 6 45 325 62 348 1.42e-34 130
MsG0880046855.01.T01 MTR_7g105070 29.293 297 187 9 41 324 50 336 1.60e-34 130
MsG0880046855.01.T01 MTR_4g117880 30.796 289 175 8 50 323 60 338 3.02e-34 129
MsG0880046855.01.T01 MTR_8g009080 30.182 275 180 7 64 333 113 380 3.84e-34 130
MsG0880046855.01.T01 MTR_5g005570 32.584 267 160 7 50 307 37 292 5.71e-34 128
MsG0880046855.01.T01 MTR_1g043810 31.690 284 177 8 50 323 54 330 5.82e-34 128
MsG0880046855.01.T01 MTR_7g029655 30.065 306 196 10 28 323 46 343 8.74e-34 128
MsG0880046855.01.T01 MTR_1g032140 33.451 284 174 8 50 326 66 341 1.24e-33 128
MsG0880046855.01.T01 MTR_0032s0040 29.054 296 185 10 44 325 64 348 1.87e-33 127
MsG0880046855.01.T01 MTR_3g083370 29.185 233 153 6 50 277 4 229 1.92e-33 124
MsG0880046855.01.T01 MTR_1g043760 31.579 285 175 9 50 323 54 329 1.92e-33 127
MsG0880046855.01.T01 MTR_1g070135 33.047 233 135 6 50 271 38 260 3.03e-33 125
MsG0880046855.01.T01 MTR_4g024660 28.428 299 186 8 44 325 61 348 7.11e-33 126
MsG0880046855.01.T01 MTR_4g132770 45.690 116 63 0 201 316 23 138 7.94e-33 120
MsG0880046855.01.T01 MTR_7g016080 28.041 296 191 7 50 339 41 320 1.09e-32 124
MsG0880046855.01.T01 MTR_7g056393 30.247 324 206 9 39 348 56 373 1.47e-32 125
MsG0880046855.01.T01 MTR_1g062110 33.621 232 141 6 50 271 66 294 1.79e-32 124
MsG0880046855.01.T01 MTR_0009s0400 42.857 119 68 0 207 325 1 119 3.10e-32 118
MsG0880046855.01.T01 MTR_8g461330 33.218 289 169 11 50 323 27 306 3.22e-32 123
MsG0880046855.01.T01 MTR_3g088745 29.236 301 184 8 42 322 28 319 5.34e-32 123
MsG0880046855.01.T01 MTR_4g087130 32.886 298 177 8 50 326 26 321 1.58e-31 122
MsG0880046855.01.T01 MTR_4g119410 30.333 300 189 9 39 325 56 348 1.71e-31 122
MsG0880046855.01.T01 MTR_8g006930 31.068 309 192 10 44 339 61 361 2.17e-31 122
MsG0880046855.01.T01 MTR_7g078010 31.544 298 178 9 44 325 61 348 2.47e-31 122
MsG0880046855.01.T01 MTR_8g469400 28.094 299 174 10 44 325 61 335 4.23e-31 121
MsG0880046855.01.T01 MTR_8g009120 28.772 285 174 7 50 323 60 326 5.87e-31 120
MsG0880046855.01.T01 MTR_1g032250 33.333 285 169 9 50 324 73 346 6.13e-31 120
MsG0880046855.01.T01 MTR_1g081840 28.707 317 184 8 28 322 40 336 7.03e-31 120
MsG0880046855.01.T01 MTR_1g043770 31.095 283 179 7 50 323 53 328 9.32e-31 120
MsG0880046855.01.T01 MTR_7g451860 29.474 285 174 8 50 323 41 309 1.28e-30 119
MsG0880046855.01.T01 MTR_7g047670 29.474 285 174 8 50 323 41 309 1.28e-30 119
MsG0880046855.01.T01 MTR_2g019370 29.703 303 186 10 37 323 15 306 1.59e-30 119
MsG0880046855.01.T01 MTR_8g093930 26.102 295 199 6 42 322 39 328 2.76e-30 119
MsG0880046855.01.T01 MTR_7g056353 30.279 251 161 5 82 325 79 322 7.74e-30 119
MsG0880046855.01.T01 MTR_2g083000 30.116 259 165 7 50 301 33 282 9.47e-30 116
MsG0880046855.01.T01 MTR_3g096500 27.586 290 185 6 51 322 67 349 1.69e-29 117
MsG0880046855.01.T01 MTR_1g032220 30.877 285 176 10 50 324 73 346 1.94e-29 116
MsG0880046855.01.T01 MTR_2g070870 31.752 274 167 10 50 314 28 290 2.70e-29 115
MsG0880046855.01.T01 MTR_8g093980 26.370 292 197 6 48 326 57 343 2.66e-28 113
MsG0880046855.01.T01 MTR_2g069060 31.933 238 150 5 40 271 17 248 6.73e-28 110
MsG0880046855.01.T01 MTR_8g009170 29.694 229 147 6 50 270 60 282 1.50e-27 110
MsG0880046855.01.T01 MTR_2g068800 27.888 251 146 8 50 289 55 281 3.96e-27 108
MsG0880046855.01.T01 MTR_1g070185 26.736 288 193 6 44 323 63 340 2.66e-26 108
MsG0880046855.01.T01 MTR_8g009150 25.965 285 174 7 50 323 60 318 3.63e-26 107
MsG0880046855.01.T01 MTR_1g027290 28.767 292 179 9 50 322 29 310 3.89e-26 107
MsG0880046855.01.T01 MTR_8g041600 29.508 244 150 6 40 271 58 291 6.13e-26 105
MsG0880046855.01.T01 MTR_3g464530 29.530 298 178 9 49 330 33 314 8.91e-26 105
MsG0880046855.01.T01 MTR_3g040410 28.956 297 190 8 50 338 6 289 8.75e-25 102
MsG0880046855.01.T01 MTR_1g043775 30.638 235 146 7 43 270 50 274 1.17e-24 102
MsG0880046855.01.T01 MTR_4g123020 29.352 293 181 10 46 323 13 294 6.52e-24 100
MsG0880046855.01.T01 MTR_4g021380 30.142 282 177 9 65 337 32 302 9.01e-24 100
MsG0880046855.01.T01 MTR_4g074130 28.231 294 186 11 50 334 40 317 9.80e-24 100
MsG0880046855.01.T01 MTR_8g009180 33.918 171 108 4 156 323 99 267 1.84e-23 99.0
MsG0880046855.01.T01 MTR_4g011720 27.152 302 199 9 50 339 9 301 2.78e-23 98.6
MsG0880046855.01.T01 MTR_8g009080 29.665 209 138 5 64 270 113 314 4.79e-23 98.2
MsG0880046855.01.T01 MTR_6g088665 28.912 294 182 11 52 322 23 312 1.89e-22 97.1
MsG0880046855.01.T01 MTR_8g009080 29.612 206 136 5 64 267 113 311 2.92e-22 96.3
MsG0880046855.01.T01 MTR_1g043810 29.825 228 146 6 50 270 54 274 4.21e-22 95.9
MsG0880046855.01.T01 MTR_1g070110 31.197 234 126 6 95 326 10 210 5.08e-22 93.6
MsG0880046855.01.T01 MTR_3g108520 27.174 276 189 8 65 334 32 301 5.78e-22 95.1
MsG0880046855.01.T01 MTR_6g088665 28.814 295 182 11 52 322 23 313 6.63e-22 95.5
MsG0880046855.01.T01 MTR_2g033270 31.379 290 169 11 47 321 14 288 1.21e-21 94.4
MsG0880046855.01.T01 MTR_5g025090 28.881 277 183 7 50 323 5 270 1.63e-21 93.6
MsG0880046855.01.T01 MTR_5g025060 26.545 275 167 6 50 323 6 246 1.67e-21 93.2
MsG0880046855.01.T01 MTR_8g030880 31.271 291 180 8 43 322 3 284 3.09e-21 93.2
MsG0880046855.01.T01 MTR_1g043770 29.956 227 146 5 50 270 53 272 3.10e-21 92.8
MsG0880046855.01.T01 MTR_5g027230 27.240 279 185 7 50 323 6 271 3.73e-21 92.8
MsG0880046855.01.T01 MTR_1g043840 36.875 160 92 3 162 314 50 207 3.83e-21 93.2
MsG0880046855.01.T01 MTR_4g011690 25.159 314 193 9 50 340 9 303 6.83e-21 92.0
MsG0880046855.01.T01 MTR_4g021360 28.155 309 199 11 50 341 7 309 7.76e-21 92.0
MsG0880046855.01.T01 MTR_5g025050 26.102 295 181 7 50 330 5 276 1.14e-20 91.3
MsG0880046855.01.T01 MTR_4g100600 27.974 311 192 12 45 334 4 303 1.46e-20 91.3
MsG0880046855.01.T01 MTR_7g078010 29.832 238 147 6 44 271 61 288 1.84e-20 90.5
MsG0880046855.01.T01 MTR_4g096840 25.559 313 207 9 40 333 19 324 2.32e-20 90.9
MsG0880046855.01.T01 MTR_1g086550 28.475 295 186 10 48 323 18 306 3.18e-20 90.5
MsG0880046855.01.T01 MTR_3g464530 29.487 234 140 7 49 271 33 252 8.36e-20 87.8
MsG0880046855.01.T01 MTR_8g102600 27.273 286 177 10 40 301 2 280 4.42e-19 87.0
MsG0880046855.01.T01 MTR_7g077670 31.507 292 179 9 43 323 4 285 4.96e-19 87.0
MsG0880046855.01.T01 MTR_2g072930 34.694 147 91 3 16 157 16 162 1.50e-18 82.4
MsG0880046855.01.T01 MTR_1g027310 24.823 282 161 7 50 322 49 288 1.51e-18 85.5
MsG0880046855.01.T01 MTR_4g100590 27.010 311 190 12 45 334 4 298 2.76e-18 84.7
MsG0880046855.01.T01 MTR_4g094900 29.864 221 126 8 50 245 8 224 4.81e-17 80.1
MsG0880046855.01.T01 MTR_7g090520 27.208 283 185 10 67 341 34 303 5.77e-17 80.9
MsG0880046855.01.T01 MTR_0009s0410 31.788 151 100 2 13 160 8 158 7.65e-17 77.4
MsG0880046855.01.T01 MTR_4g100590 28.090 267 155 12 89 334 1 251 9.56e-14 70.9
MsG0880046855.01.T01 MTR_8g102600 27.848 237 140 10 89 301 1 230 1.11e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046855.01.T01 AT1G49390 46.087 345 178 2 10 346 2 346 1.16e-113 334
MsG0880046855.01.T01 AT5G20400 45.723 339 176 2 10 340 2 340 8.52e-108 319
MsG0880046855.01.T01 AT5G20550 46.176 340 174 3 10 340 2 341 1.85e-104 311
MsG0880046855.01.T01 AT1G49390 49.438 267 135 0 80 346 1 267 6.16e-102 301
MsG0880046855.01.T01 AT5G54000 44.412 340 180 4 10 340 2 341 2.01e-101 303
MsG0880046855.01.T01 AT5G54000 46.743 261 139 0 80 340 1 261 7.66e-91 273
MsG0880046855.01.T01 AT3G21420 41.667 312 169 6 50 350 55 364 2.25e-72 229
MsG0880046855.01.T01 AT1G17020 38.150 346 198 5 16 348 16 358 6.00e-71 225
MsG0880046855.01.T01 AT4G25300 38.728 346 195 5 16 348 15 356 9.50e-70 222
MsG0880046855.01.T01 AT2G38240 36.792 318 193 5 16 326 11 327 1.56e-68 219
MsG0880046855.01.T01 AT1G17010 37.700 313 189 2 42 348 46 358 3.13e-68 218
MsG0880046855.01.T01 AT1G78550 38.019 313 185 4 43 348 46 356 1.82e-66 214
MsG0880046855.01.T01 AT5G05600 35.517 290 180 2 40 322 52 341 8.94e-63 204
MsG0880046855.01.T01 AT4G25310 37.329 292 170 4 63 348 69 353 2.41e-60 198
MsG0880046855.01.T01 AT1G78550 37.906 277 166 4 76 348 4 278 3.66e-60 195
MsG0880046855.01.T01 AT3G11180 37.410 278 171 3 48 322 93 370 1.96e-58 194
MsG0880046855.01.T01 AT3G11180 37.410 278 171 3 48 322 93 370 2.45e-58 194
MsG0880046855.01.T01 AT3G55970 35.439 285 175 3 50 325 52 336 1.23e-57 191
MsG0880046855.01.T01 AT4G16330 36.275 306 176 10 50 346 67 362 1.40e-55 186
MsG0880046855.01.T01 AT4G10500 38.745 271 159 5 50 316 44 311 5.01e-55 184
MsG0880046855.01.T01 AT5G08640 34.768 302 187 6 49 344 39 336 7.06e-55 183
MsG0880046855.01.T01 AT5G08640 34.768 302 187 6 49 344 39 336 7.06e-55 183
MsG0880046855.01.T01 AT1G55290 36.474 329 185 12 26 344 43 357 1.75e-53 180
MsG0880046855.01.T01 AT4G22880 33.582 268 166 5 50 307 47 312 1.75e-53 180
MsG0880046855.01.T01 AT4G22880 33.582 268 166 5 50 307 47 312 1.75e-53 180
MsG0880046855.01.T01 AT4G22880 33.582 268 166 5 50 307 47 312 1.75e-53 180
MsG0880046855.01.T01 AT5G24530 35.789 285 175 5 45 324 33 314 1.86e-52 177
MsG0880046855.01.T01 AT3G13610 35.275 309 181 10 50 348 62 361 1.07e-50 173
MsG0880046855.01.T01 AT4G10490 36.299 281 170 6 50 324 42 319 3.89e-49 168
MsG0880046855.01.T01 AT5G05600 34.728 239 149 2 40 271 52 290 4.98e-49 166
MsG0880046855.01.T01 AT4G16330 37.121 264 149 9 92 346 1 256 1.81e-48 164
MsG0880046855.01.T01 AT1G05010 33.948 271 166 5 50 314 4 267 1.64e-46 161
MsG0880046855.01.T01 AT2G44800 32.907 313 189 8 27 333 34 331 1.81e-46 162
MsG0880046855.01.T01 AT2G36690 32.886 298 188 6 50 340 61 353 3.06e-45 159
MsG0880046855.01.T01 AT2G36690 32.886 298 188 6 50 340 61 353 3.06e-45 159
MsG0880046855.01.T01 AT3G19010 36.066 305 169 9 45 326 18 319 1.48e-44 156
MsG0880046855.01.T01 AT3G19010 36.066 305 169 9 45 326 18 319 1.48e-44 156
MsG0880046855.01.T01 AT4G25310 33.681 288 158 4 63 348 69 325 1.84e-44 155
MsG0880046855.01.T01 AT3G55970 35.065 231 141 3 50 271 52 282 2.71e-44 154
MsG0880046855.01.T01 AT1G12010 30.292 274 179 5 48 316 5 271 9.78e-44 154
MsG0880046855.01.T01 AT3G60290 31.889 323 193 9 16 322 15 326 1.03e-43 154
MsG0880046855.01.T01 AT1G77330 32.601 273 166 5 48 310 1 265 3.39e-43 152
MsG0880046855.01.T01 AT1G15550 33.569 283 174 6 50 325 57 332 3.52e-43 153
MsG0880046855.01.T01 AT1G62380 30.515 272 177 6 48 314 5 269 5.69e-43 151
MsG0880046855.01.T01 AT3G51240 32.119 302 173 7 23 311 22 304 1.56e-42 151
MsG0880046855.01.T01 AT5G07480 33.333 300 170 10 43 323 38 326 4.17e-42 150
MsG0880046855.01.T01 AT5G63590 30.420 286 189 4 50 326 14 298 5.23e-42 149
MsG0880046855.01.T01 AT5G43450 31.529 314 191 10 26 325 34 337 9.79e-42 149
MsG0880046855.01.T01 AT5G63600 28.239 301 204 6 43 336 22 317 1.37e-41 148
MsG0880046855.01.T01 AT1G60980 32.082 293 176 7 37 309 41 330 2.27e-41 149
MsG0880046855.01.T01 AT5G07200 31.046 306 189 7 48 338 56 354 4.46e-41 148
MsG0880046855.01.T01 AT5G63600 28.146 302 204 7 43 336 22 318 1.04e-40 145
MsG0880046855.01.T01 AT3G19000 35.294 323 176 12 28 329 16 326 5.67e-40 144
MsG0880046855.01.T01 AT4G21690 32.581 310 188 8 29 325 26 327 7.74e-40 144
MsG0880046855.01.T01 AT4G25300 38.974 195 109 3 160 348 72 262 8.24e-40 142
MsG0880046855.01.T01 AT3G51240 35.556 225 129 4 95 311 4 220 5.32e-39 140
MsG0880046855.01.T01 AT5G51810 33.115 305 181 8 34 322 44 341 7.28e-39 142
MsG0880046855.01.T01 AT4G21200 31.987 297 176 8 48 329 40 325 1.31e-37 138
MsG0880046855.01.T01 AT5G63595 29.921 254 154 5 50 301 25 256 1.91e-37 136
MsG0880046855.01.T01 AT5G59530 31.085 341 207 10 26 351 34 361 2.04e-37 138
MsG0880046855.01.T01 AT3G12900 29.066 289 192 7 65 347 74 355 2.09e-37 138
MsG0880046855.01.T01 AT5G43935 29.795 292 173 7 50 334 19 285 3.73e-37 135
MsG0880046855.01.T01 AT4G25420 30.175 285 185 4 50 322 61 343 3.81e-37 137
MsG0880046855.01.T01 AT5G43440 30.314 287 185 8 48 325 60 340 7.83e-37 136
MsG0880046855.01.T01 AT1G80330 29.582 311 205 7 50 350 49 355 3.07e-36 134
MsG0880046855.01.T01 AT1G80340 32.155 283 178 6 50 325 50 325 9.56e-36 133
MsG0880046855.01.T01 AT3G19010 33.007 306 147 9 45 326 18 289 1.08e-35 132
MsG0880046855.01.T01 AT5G59540 28.198 344 214 11 26 348 35 366 1.83e-35 133
MsG0880046855.01.T01 AT1G04380 30.526 285 178 8 50 324 45 319 2.58e-35 132
MsG0880046855.01.T01 AT1G03410 29.352 293 188 9 45 325 52 337 9.79e-35 130
MsG0880046855.01.T01 AT1G03410 28.707 317 191 10 21 325 81 374 1.75e-34 130
MsG0880046855.01.T01 AT1G44090 32.130 277 174 5 50 314 63 337 1.78e-34 130
MsG0880046855.01.T01 AT1G06645 30.717 293 179 10 50 328 77 359 2.11e-34 130
MsG0880046855.01.T01 AT2G30830 30.345 290 186 8 45 324 49 332 3.53e-34 129
MsG0880046855.01.T01 AT2G30840 29.355 310 196 9 44 342 51 348 4.67e-34 129
MsG0880046855.01.T01 AT1G04350 29.781 319 200 11 44 348 52 360 5.94e-34 129
MsG0880046855.01.T01 AT1G06620 30.508 295 188 7 41 325 53 340 8.41e-34 128
MsG0880046855.01.T01 AT5G63580 32.889 225 145 4 50 271 19 240 2.58e-33 124
MsG0880046855.01.T01 AT1G06640 27.848 316 200 10 50 350 64 366 2.65e-33 127
MsG0880046855.01.T01 AT2G19590 27.931 290 194 4 50 333 11 291 3.14e-33 125
MsG0880046855.01.T01 AT3G50210 28.767 292 176 7 50 311 8 297 4.91e-33 125
MsG0880046855.01.T01 AT3G50210 28.767 292 176 7 50 311 8 297 4.91e-33 125
MsG0880046855.01.T01 AT3G50210 28.767 292 176 7 50 311 8 297 4.91e-33 125
MsG0880046855.01.T01 AT3G49620 30.201 298 176 10 50 320 34 326 5.22e-33 126
MsG0880046855.01.T01 AT5G63580 33.184 223 143 4 50 269 19 238 7.48e-33 123
MsG0880046855.01.T01 AT1G06650 29.252 294 187 9 50 329 64 350 9.54e-33 125
MsG0880046855.01.T01 AT3G19010 36.111 252 133 9 45 272 18 265 1.46e-32 123
MsG0880046855.01.T01 AT5G43450 31.641 256 154 8 26 270 34 279 1.15e-31 120
MsG0880046855.01.T01 AT2G25450 28.076 317 210 9 44 348 49 359 1.96e-31 122
MsG0880046855.01.T01 AT5G07480 32.828 198 118 5 136 323 25 217 4.67e-31 118
MsG0880046855.01.T01 AT2G19590 28.077 260 175 3 77 333 26 276 5.26e-31 119
MsG0880046855.01.T01 AT2G30840 28.710 310 192 10 44 342 51 342 2.51e-30 119
MsG0880046855.01.T01 AT3G49630 28.571 308 183 10 50 325 9 311 3.83e-30 117
MsG0880046855.01.T01 AT5G12270 28.481 316 199 7 49 348 55 359 5.57e-30 118
MsG0880046855.01.T01 AT1G78440 31.142 289 173 10 50 323 18 295 6.43e-30 117
MsG0880046855.01.T01 AT3G49630 29.749 279 172 9 66 325 34 307 1.30e-29 116
MsG0880046855.01.T01 AT3G19000 33.208 265 145 11 28 271 16 269 2.67e-29 114
MsG0880046855.01.T01 AT3G61400 28.839 267 179 6 64 324 84 345 3.08e-29 116
MsG0880046855.01.T01 AT1G03400 28.114 281 188 7 50 325 56 327 7.59e-29 114
MsG0880046855.01.T01 AT5G43440 30.172 232 150 6 48 273 60 285 2.83e-28 112
MsG0880046855.01.T01 AT4G25420 29.060 234 152 4 50 271 61 292 9.49e-27 107
MsG0880046855.01.T01 AT5G51810 31.907 257 152 8 34 274 44 293 1.88e-26 107
MsG0880046855.01.T01 AT1G06620 31.224 237 149 6 41 270 53 282 5.18e-26 105
MsG0880046855.01.T01 AT1G30040 28.179 291 192 8 46 323 19 305 5.19e-26 107
MsG0880046855.01.T01 AT1G47990 30.592 304 180 10 50 336 15 304 8.02e-26 105
MsG0880046855.01.T01 AT1G04380 29.004 231 147 6 50 273 45 265 1.00e-25 104
MsG0880046855.01.T01 AT1G50960 27.500 280 183 7 40 307 26 297 1.79e-25 105
MsG0880046855.01.T01 AT5G59540 28.244 262 160 8 26 271 35 284 8.07e-25 102
MsG0880046855.01.T01 AT1G06650 28.205 234 155 5 50 276 64 291 2.25e-24 101
MsG0880046855.01.T01 AT2G30840 28.085 235 155 5 44 270 51 279 3.10e-24 101
MsG0880046855.01.T01 AT1G06640 27.586 232 147 6 50 270 64 285 3.92e-24 101
MsG0880046855.01.T01 AT3G46500 28.528 326 209 14 40 347 5 324 4.82e-24 101
MsG0880046855.01.T01 AT1G06640 27.753 227 147 6 50 267 64 282 7.49e-24 99.8
MsG0880046855.01.T01 AT2G34555 29.779 272 177 8 50 314 27 291 9.76e-24 100
MsG0880046855.01.T01 AT1G03400 25.402 311 190 8 48 325 54 355 3.37e-23 99.8
MsG0880046855.01.T01 AT1G14130 28.720 289 192 6 50 334 9 287 8.10e-23 97.4
MsG0880046855.01.T01 AT4G03070 27.046 281 188 8 70 342 41 312 1.96e-22 96.7
MsG0880046855.01.T01 AT3G50210 29.268 164 111 2 153 311 52 215 8.74e-22 93.2
MsG0880046855.01.T01 AT3G46500 28.826 281 175 13 40 301 5 279 4.92e-21 92.4
MsG0880046855.01.T01 AT3G49630 29.050 179 119 4 153 325 62 238 6.86e-21 90.9
MsG0880046855.01.T01 AT3G61400 27.619 210 145 4 64 271 84 288 9.68e-21 91.3
MsG0880046855.01.T01 AT1G02400 27.419 310 207 10 39 337 13 315 2.36e-20 90.9
MsG0880046855.01.T01 AT1G14120 29.225 284 187 6 50 329 8 281 3.95e-20 90.1
MsG0880046855.01.T01 AT1G14120 29.225 284 187 6 50 329 8 281 3.95e-20 90.1
MsG0880046855.01.T01 AT1G14120 29.225 284 187 6 50 329 8 281 3.95e-20 90.1
MsG0880046855.01.T01 AT1G52820 29.480 173 118 3 152 323 119 288 5.50e-20 89.7
MsG0880046855.01.T01 AT3G47190 27.891 294 184 9 43 323 25 303 1.05e-18 86.3
MsG0880046855.01.T01 AT1G28030 24.458 323 187 9 43 333 6 303 1.36e-18 85.9
MsG0880046855.01.T01 AT5G58660 26.183 317 194 9 11 302 5 306 1.74e-18 85.9
MsG0880046855.01.T01 AT1G35190 29.520 271 167 10 52 301 14 281 2.16e-18 85.1
MsG0880046855.01.T01 AT4G23340 28.247 308 195 11 48 341 8 303 2.46e-18 85.1
MsG0880046855.01.T01 AT3G46490 29.021 286 161 13 50 301 9 286 3.72e-18 84.7
MsG0880046855.01.T01 AT3G46500 31.429 210 128 9 149 347 46 250 1.83e-17 81.3
MsG0880046855.01.T01 AT3G46500 31.429 210 128 9 149 347 46 250 1.83e-17 81.3
MsG0880046855.01.T01 AT1G52800 26.266 316 199 13 50 347 10 309 3.24e-17 81.6
MsG0880046855.01.T01 AT3G46490 28.269 283 161 13 50 298 9 283 7.17e-17 80.5
MsG0880046855.01.T01 AT4G23340 33.333 186 115 6 164 341 1 185 4.82e-16 76.3
MsG0880046855.01.T01 AT4G16765 34.066 182 104 8 153 322 50 227 5.12e-16 77.0
MsG0880046855.01.T01 AT4G16765 34.078 179 102 8 153 319 50 224 7.75e-16 76.6
MsG0880046855.01.T01 AT4G16765 34.078 179 102 8 153 319 50 224 7.75e-16 76.6
MsG0880046855.01.T01 AT4G16765 34.078 179 102 8 153 319 50 224 7.75e-16 76.6
MsG0880046855.01.T01 AT4G22870 45.588 68 36 1 240 307 2 68 2.43e-15 72.0
MsG0880046855.01.T01 AT3G46500 30.729 192 121 7 164 347 1 188 2.77e-15 73.9
MsG0880046855.01.T01 AT3G46480 30.534 262 158 11 96 347 37 284 2.81e-15 75.9
MsG0880046855.01.T01 AT5G51310 26.045 311 177 13 48 326 3 292 3.62e-15 75.9
MsG0880046855.01.T01 AT5G58660 25.263 285 174 8 11 271 5 274 1.29e-14 73.6
MsG0880046855.01.T01 AT3G46500 32.927 164 95 8 149 301 46 205 1.32e-14 72.8
MsG0880046855.01.T01 AT4G16765 38.462 104 57 3 221 319 77 178 1.53e-14 72.0
MsG0880046855.01.T01 AT1G30040 25.523 239 161 8 46 271 19 253 1.59e-13 70.5
MsG0880046855.01.T01 AT4G03050 33.083 133 86 3 217 347 271 402 2.34e-13 71.2
MsG0880046855.01.T01 AT4G03050 33.083 133 86 3 217 347 271 402 2.34e-13 71.2
MsG0880046855.01.T01 AT3G46500 32.653 147 88 6 163 301 31 174 1.40e-12 66.2
MsG0880046855.01.T01 AT3G46500 32.653 147 88 6 163 301 31 174 1.40e-12 66.2
MsG0880046855.01.T01 AT4G22870 42.857 63 35 1 245 307 48 109 2.47e-12 64.7
MsG0880046855.01.T01 AT3G46500 27.317 205 119 9 149 347 46 226 3.90e-12 65.5
MsG0880046855.01.T01 AT1G52810 23.232 297 164 11 67 347 36 284 1.03e-11 65.1
MsG0880046855.01.T01 AT1G52790 26.241 282 186 11 61 333 23 291 1.20e-11 65.5

Find 63 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATCACAATATTTAGTTAA+TGG 0.165770 8:-79121688 MsG0880046855.01.T01:CDS
TCTAGACCTGATTTGGTTCT+TGG 0.191508 8:-79120353 MsG0880046855.01.T01:CDS
CACCATCCATAGACATTTCT+TGG 0.191946 8:+79121719 None:intergenic
CATGGCAAGGTCACTGAATT+TGG 0.228708 8:-79120450 MsG0880046855.01.T01:CDS
AGAAGACTTACATCAATTAT+TGG 0.253342 8:+79121619 None:intergenic
TTAGTTAATGGAAATGTCTT+TGG 0.256368 8:-79121676 MsG0880046855.01.T01:CDS
CCAGAACCAGAGAACAAAAT+TGG 0.295756 8:-79119982 MsG0880046855.01.T01:CDS
CTTACATCAATTATTGGTAT+TGG 0.309003 8:+79121625 None:intergenic
GAGTTCAGCTGGATGCTTCC+AGG 0.315055 8:-79121557 MsG0880046855.01.T01:intron
ACCTTGTTCTAGACCTGATT+TGG 0.316801 8:-79120360 MsG0880046855.01.T01:CDS
CAGAAAACCCTAGTGATTTC+AGG 0.324517 8:-79120841 MsG0880046855.01.T01:intron
GGCAGTTTCTTGGATCAGTT+TGG 0.332111 8:-79120422 MsG0880046855.01.T01:CDS
TTTGGAAGAAGGCAGTTTCT+TGG 0.349320 8:-79120432 MsG0880046855.01.T01:CDS
AATGCTCTTGTTGTCAATCT+TGG 0.377963 8:-79120218 MsG0880046855.01.T01:CDS
CTCTGAAACAAGTAAATTGT+TGG 0.406723 8:+79121765 None:intergenic
GCAGTTTCTTGGATCAGTTT+GGG 0.417776 8:-79120421 MsG0880046855.01.T01:CDS
GAGTGTCCAAGAAATGTCTA+TGG 0.420323 8:-79121725 MsG0880046855.01.T01:CDS
CAGAGTTACCTACCTGCATT+TGG 0.420572 8:+79120192 None:intergenic
AGATTGACAACAAGAGCATT+AGG 0.424838 8:+79120221 None:intergenic
TCATTTATCAGTCCTTCAAC+AGG 0.444740 8:+79119958 None:intergenic
AACCAAAGTGAAGTCAATGA+TGG 0.448347 8:-79120489 MsG0880046855.01.T01:CDS
TTGTCACAACCCTATGCATT+GGG 0.452776 8:+79120046 None:intergenic
ACAAGAGCATTAGGTATTGT+AGG 0.454442 8:+79120230 None:intergenic
ATTATGGTGATATTAACTAT+AGG 0.457992 8:-79119903 MsG0880046855.01.T01:CDS
CAGAGAAACAAGTCCTTGAT+TGG 0.462937 8:-79120922 MsG0880046855.01.T01:CDS
GACATTTCTTGGACACTCCT+TGG 0.464376 8:+79121730 None:intergenic
AACAAAATTGGACCTGTTGA+AGG 0.467643 8:-79119970 MsG0880046855.01.T01:CDS
AGATCTGCTCTGAGTTCAGC+TGG 0.481389 8:-79121568 MsG0880046855.01.T01:CDS
AAGTTCTGATAGATGACAAA+TGG 0.483865 8:-79120262 MsG0880046855.01.T01:CDS
GATAGAAGTTGATCCTTGCT+TGG 0.489821 8:+79120384 None:intergenic
ATCCATCATTGACTTCACTT+TGG 0.492022 8:+79120487 None:intergenic
TACTCCTACCAACAGGCAAT+TGG 0.492084 8:-79121082 MsG0880046855.01.T01:intron
TTGACACCAAGAACCAAATC+AGG 0.494406 8:+79120347 None:intergenic
TTTGTCACAACCCTATGCAT+TGG 0.500427 8:+79120045 None:intergenic
TTACAAGACAGAGAAGTTGA+AGG 0.510990 8:-79120290 MsG0880046855.01.T01:CDS
CAACAATTTACTTGTTTCAG+AGG 0.517495 8:-79121764 MsG0880046855.01.T01:CDS
CCATTAACTAAATATTGTGA+TGG 0.519513 8:+79121688 None:intergenic
AAACCTCACACTGATAGATC+AGG 0.534823 8:-79120326 MsG0880046855.01.T01:CDS
CAATCTTGGCGACCAAATGC+AGG 0.535233 8:-79120204 MsG0880046855.01.T01:intron
GTGAATGAATCTGAAGGGTA+TGG 0.536776 8:-79120962 MsG0880046855.01.T01:CDS
TTGATGTAGATTATGAGTAA+TGG 0.537887 8:-79120081 MsG0880046855.01.T01:intron
TATTCAAGAGCCCAATGCAT+AGG 0.540400 8:-79120056 MsG0880046855.01.T01:CDS
TAGTAGTACCTGAAATCACT+AGG 0.541774 8:+79120833 None:intergenic
AACTATAGGTGCTATCAAGA+GGG 0.543530 8:-79119889 MsG0880046855.01.T01:CDS
TAAGGCGATAAGACCAATCA+AGG 0.548745 8:+79120909 None:intergenic
CAGAGGAGAAATCACTTCCA+AGG 0.551313 8:-79121747 MsG0880046855.01.T01:CDS
TGCAATCATTATTCCAAGCA+AGG 0.564827 8:-79120397 MsG0880046855.01.T01:CDS
TTAACTAAATATTGTGATGG+TGG 0.565005 8:+79121691 None:intergenic
ATTCAAGAGCCCAATGCATA+GGG 0.569743 8:-79120055 MsG0880046855.01.T01:CDS
GGATTATCTCTTGAGAAGCA+TGG 0.578041 8:-79120468 MsG0880046855.01.T01:CDS
TAACTATAGGTGCTATCAAG+AGG 0.579053 8:-79119890 MsG0880046855.01.T01:CDS
AGGTCACTGAATTTGGAAGA+AGG 0.580526 8:-79120443 MsG0880046855.01.T01:CDS
TGATAAATGAGACACGTCCA+AGG 0.605392 8:-79119945 MsG0880046855.01.T01:CDS
ATCTCTTGAGAAGCATGGCA+AGG 0.628541 8:-79120463 MsG0880046855.01.T01:CDS
ATTCCTGATCTATCAGTGTG+AGG 0.640228 8:+79120323 None:intergenic
GTCCAAGAAATGTCTATGGA+TGG 0.641243 8:-79121721 MsG0880046855.01.T01:CDS
AGTAGTACCTGAAATCACTA+GGG 0.643516 8:+79120834 None:intergenic
ACTATAGGTGCTATCAAGAG+GGG 0.648157 8:-79119888 MsG0880046855.01.T01:CDS
ACCAAATCAGGTCTAGAACA+AGG 0.656375 8:+79120359 None:intergenic
CGAACTGTGAATGAATCTGA+AGG 0.662089 8:-79120968 MsG0880046855.01.T01:CDS
GAACTGTGAATGAATCTGAA+GGG 0.674219 8:-79120967 MsG0880046855.01.T01:CDS
GATAAATGAGACACGTCCAA+GGG 0.695782 8:-79119944 MsG0880046855.01.T01:CDS
AAATCAGGTCTAGAACAAGG+TGG 0.726870 8:+79120362 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAATGTCAAAAATTA+TGG - Chr8:79121699-79121718 MsG0880046855.01.T01:CDS 10.0%
!!! TAAAATTGATTCTTTAAAAT+AGG - Chr8:79120266-79120285 MsG0880046855.01.T01:CDS 10.0%
!! AAATATAGAAATTCATTTAG+CGG + Chr8:79120512-79120531 None:intergenic 15.0%
!! ATTATGGTGATATTAACTAT+AGG - Chr8:79121715-79121734 MsG0880046855.01.T01:CDS 20.0%
!!! AATTGATTCTTTAAAATAGG+TGG - Chr8:79120269-79120288 MsG0880046855.01.T01:CDS 20.0%
!!! GAAAATACTAATTTGAAGTT+TGG - Chr8:79121512-79121531 MsG0880046855.01.T01:intron 20.0%
! AACTACTAATCACTAATGTT+AGG + Chr8:79120393-79120412 None:intergenic 25.0%
! ACTACTAATCACTAATGTTA+GGG + Chr8:79120392-79120411 None:intergenic 25.0%
! ACTATTATGAGGATTTCTTA+AGG - Chr8:79121006-79121025 MsG0880046855.01.T01:CDS 25.0%
! AGAAGACTTACATCAATTAT+TGG + Chr8:79120002-79120021 None:intergenic 25.0%
! CCATCACAATATTTAGTTAA+TGG - Chr8:79119930-79119949 MsG0880046855.01.T01:CDS 25.0%
! CCATTAACTAAATATTGTGA+TGG + Chr8:79119933-79119952 None:intergenic 25.0%
! CTATTATGAGGATTTCTTAA+GGG - Chr8:79121007-79121026 MsG0880046855.01.T01:CDS 25.0%
! CTTACATCAATTATTGGTAT+TGG + Chr8:79119996-79120015 None:intergenic 25.0%
! TTAACTAAATATTGTGATGG+TGG + Chr8:79119930-79119949 None:intergenic 25.0%
! TTAGTTAATGGAAATGTCTT+TGG - Chr8:79119942-79119961 MsG0880046855.01.T01:CDS 25.0%
! TTATTGTAAAAATCTTCACC+TGG + Chr8:79120082-79120101 None:intergenic 25.0%
! TTGATGTAGATTATGAGTAA+TGG - Chr8:79121537-79121556 MsG0880046855.01.T01:intron 25.0%
! TTTGTGTATGTTTAGTTATG+TGG - Chr8:79120113-79120132 MsG0880046855.01.T01:intron 25.0%
!! TTTTTCCAAAAGAAAAACGA+AGG - Chr8:79120741-79120760 MsG0880046855.01.T01:intron 25.0%
!!! AAAACAATTTTTTGCACTTC+CGG - Chr8:79120604-79120623 MsG0880046855.01.T01:intron 25.0%
CAACAATTTACTTGTTTCAG+AGG - Chr8:79119854-79119873 MsG0880046855.01.T01:CDS 30.0%
CCAATTTCTCTACTATTATG+AGG - Chr8:79120995-79121014 MsG0880046855.01.T01:CDS 30.0%
CCTCATAATAGTAGAGAAAT+TGG + Chr8:79120998-79121017 None:intergenic 30.0%
CGCAAACTTATTTGAACAAT+TGG - Chr8:79120446-79120465 MsG0880046855.01.T01:CDS 30.0%
CTGTGATCGATTAGAAAAAT+CGG - Chr8:79120486-79120505 MsG0880046855.01.T01:CDS 30.0%
TAAAATAGGTGGTTCAGAAT+TGG - Chr8:79120280-79120299 MsG0880046855.01.T01:CDS 30.0%
! AAGTTCTGATAGATGACAAA+TGG - Chr8:79121356-79121375 MsG0880046855.01.T01:intron 30.0%
! GTACTACTACTCTTTTCTTA+TGG - Chr8:79120799-79120818 MsG0880046855.01.T01:intron 30.0%
! TTGACATTTTTATACACCCT+TGG + Chr8:79121693-79121712 None:intergenic 30.0%
!! CTCTGAAACAAGTAAATTGT+TGG + Chr8:79119856-79119875 None:intergenic 30.0%
!! TATTTCTGTTTTTCCTCAAC+CGG + Chr8:79120626-79120645 None:intergenic 30.0%
!!! TGGATTATTTTTTGCAGAGA+TGG - Chr8:79120300-79120319 MsG0880046855.01.T01:CDS 30.0%
AAAAACGAAGGCTTTCTCTT+TGG - Chr8:79120753-79120772 MsG0880046855.01.T01:intron 35.0%
AACAAAATTGGACCTGTTGA+AGG - Chr8:79121648-79121667 MsG0880046855.01.T01:CDS 35.0%
AACCAAAGTGAAGTCAATGA+TGG - Chr8:79121129-79121148 MsG0880046855.01.T01:intron 35.0%
AGTAGTACCTGAAATCACTA+GGG + Chr8:79120787-79120806 None:intergenic 35.0%
ATTAGCAACTCAGATACATG+AGG + Chr8:79120856-79120875 None:intergenic 35.0%
GAACTGTGAATGAATCTGAA+GGG - Chr8:79120651-79120670 MsG0880046855.01.T01:intron 35.0%
GCTAATTGAATGTCCTGAAA+AGG - Chr8:79120870-79120889 MsG0880046855.01.T01:CDS 35.0%
TAGTAGTACCTGAAATCACT+AGG + Chr8:79120788-79120807 None:intergenic 35.0%
TCATTTATCAGTCCTTCAAC+AGG + Chr8:79121663-79121682 None:intergenic 35.0%
TGCAATCATTATTCCAAGCA+AGG - Chr8:79121221-79121240 MsG0880046855.01.T01:intron 35.0%
TTACAAGACAGAGAAGTTGA+AGG - Chr8:79121328-79121347 MsG0880046855.01.T01:intron 35.0%
TTGGAAAAACACGAAGAGTA+AGG + Chr8:79120730-79120749 None:intergenic 35.0%
! AAATAACACCTCTCCTTTTC+AGG + Chr8:79120886-79120905 None:intergenic 35.0%
! AACTATAGGTGCTATCAAGA+GGG - Chr8:79121729-79121748 MsG0880046855.01.T01:CDS 35.0%
! AATGCTCTTGTTGTCAATCT+TGG - Chr8:79121400-79121419 MsG0880046855.01.T01:intron 35.0%
! TAACTATAGGTGCTATCAAG+AGG - Chr8:79121728-79121747 MsG0880046855.01.T01:CDS 35.0%
!! ACAAGAGCATTAGGTATTGT+AGG + Chr8:79121391-79121410 None:intergenic 35.0%
!! AGATTGACAACAAGAGCATT+AGG + Chr8:79121400-79121419 None:intergenic 35.0%
!! ATCCATCATTGACTTCACTT+TGG + Chr8:79121134-79121153 None:intergenic 35.0%
!! GAAAGCCTTCGTTTTTCTTT+TGG + Chr8:79120749-79120768 None:intergenic 35.0%
AAACCTCACACTGATAGATC+AGG - Chr8:79121292-79121311 MsG0880046855.01.T01:intron 40.0%
AGGTCACTGAATTTGGAAGA+AGG - Chr8:79121175-79121194 MsG0880046855.01.T01:intron 40.0%
ATTCAAGAGCCCAATGCATA+GGG - Chr8:79121563-79121582 MsG0880046855.01.T01:CDS 40.0%
ATTCCTGATCTATCAGTGTG+AGG + Chr8:79121298-79121317 None:intergenic 40.0%
CACCATCCATAGACATTTCT+TGG + Chr8:79119902-79119921 None:intergenic 40.0%
CAGAAAACCCTAGTGATTTC+AGG - Chr8:79120777-79120796 MsG0880046855.01.T01:intron 40.0%
CAGAGAAACAAGTCCTTGAT+TGG - Chr8:79120696-79120715 MsG0880046855.01.T01:intron 40.0%
CCAGAACCAGAGAACAAAAT+TGG - Chr8:79121636-79121655 MsG0880046855.01.T01:CDS 40.0%
CGAACTGTGAATGAATCTGA+AGG - Chr8:79120650-79120669 MsG0880046855.01.T01:intron 40.0%
GAGTGTCCAAGAAATGTCTA+TGG - Chr8:79119893-79119912 MsG0880046855.01.T01:CDS 40.0%
GATAAATGAGACACGTCCAA+GGG - Chr8:79121674-79121693 MsG0880046855.01.T01:CDS 40.0%
GCAGTTTCTTGGATCAGTTT+GGG - Chr8:79121197-79121216 MsG0880046855.01.T01:intron 40.0%
GGATTATCTCTTGAGAAGCA+TGG - Chr8:79121150-79121169 MsG0880046855.01.T01:intron 40.0%
GTCCAAGAAATGTCTATGGA+TGG - Chr8:79119897-79119916 MsG0880046855.01.T01:CDS 40.0%
GTGAATGAATCTGAAGGGTA+TGG - Chr8:79120656-79120675 MsG0880046855.01.T01:intron 40.0%
TAAGGCGATAAGACCAATCA+AGG + Chr8:79120712-79120731 None:intergenic 40.0%
TATTCAAGAGCCCAATGCAT+AGG - Chr8:79121562-79121581 MsG0880046855.01.T01:CDS 40.0%
TGATAAATGAGACACGTCCA+AGG - Chr8:79121673-79121692 MsG0880046855.01.T01:CDS 40.0%
TTGAATGTCCTGAAAAGGAG+AGG - Chr8:79120875-79120894 MsG0880046855.01.T01:CDS 40.0%
TTGACACCAAGAACCAAATC+AGG + Chr8:79121274-79121293 None:intergenic 40.0%
TTGTCACAACCCTATGCATT+GGG + Chr8:79121575-79121594 None:intergenic 40.0%
TTTGGAAGAAGGCAGTTTCT+TGG - Chr8:79121186-79121205 MsG0880046855.01.T01:intron 40.0%
TTTGTCACAACCCTATGCAT+TGG + Chr8:79121576-79121595 None:intergenic 40.0%
! AAATCAGGTCTAGAACAAGG+TGG + Chr8:79121259-79121278 None:intergenic 40.0%
! ACAGGTCCAATTTTGTTCTC+TGG + Chr8:79121645-79121664 None:intergenic 40.0%
! ACCAAATCAGGTCTAGAACA+AGG + Chr8:79121262-79121281 None:intergenic 40.0%
! ACCTTGTTCTAGACCTGATT+TGG - Chr8:79121258-79121277 MsG0880046855.01.T01:intron 40.0%
! ACTATAGGTGCTATCAAGAG+GGG - Chr8:79121730-79121749 MsG0880046855.01.T01:CDS 40.0%
! CTGAAATCACTAGGGTTTTC+TGG + Chr8:79120779-79120798 None:intergenic 40.0%
! GATAGAAGTTGATCCTTGCT+TGG + Chr8:79121237-79121256 None:intergenic 40.0%
!! CCAATTTTGTTCTCTGGTTC+TGG + Chr8:79121639-79121658 None:intergenic 40.0%
!! TCTAGACCTGATTTGGTTCT+TGG - Chr8:79121265-79121284 MsG0880046855.01.T01:intron 40.0%
!!! ATTTTTTGCACTTCCGGTTG+AGG - Chr8:79120610-79120629 MsG0880046855.01.T01:intron 40.0%
CAGAGGAGAAATCACTTCCA+AGG - Chr8:79119871-79119890 MsG0880046855.01.T01:CDS 45.0%
CAGAGTTACCTACCTGCATT+TGG + Chr8:79121429-79121448 None:intergenic 45.0%
CATGGCAAGGTCACTGAATT+TGG - Chr8:79121168-79121187 MsG0880046855.01.T01:intron 45.0%
GACATTTCTTGGACACTCCT+TGG + Chr8:79119891-79119910 None:intergenic 45.0%
GGCAGTTTCTTGGATCAGTT+TGG - Chr8:79121196-79121215 MsG0880046855.01.T01:intron 45.0%
TACTCCTACCAACAGGCAAT+TGG - Chr8:79120536-79120555 MsG0880046855.01.T01:intron 45.0%
TTTGACGTACTCCTACCAAC+AGG - Chr8:79120529-79120548 MsG0880046855.01.T01:intron 45.0%
! ATCTCTTGAGAAGCATGGCA+AGG - Chr8:79121155-79121174 MsG0880046855.01.T01:intron 45.0%
CAATCTTGGCGACCAAATGC+AGG - Chr8:79121414-79121433 MsG0880046855.01.T01:intron 50.0%
GTGACCAATTGCCTGTTGGT+AGG + Chr8:79120543-79120562 None:intergenic 50.0%
TGTCGTGACCAATTGCCTGT+TGG + Chr8:79120547-79120566 None:intergenic 50.0%
! AGATCTGCTCTGAGTTCAGC+TGG - Chr8:79120050-79120069 MsG0880046855.01.T01:CDS 50.0%
CTTGGCGACCAAATGCAGGT+AGG - Chr8:79121418-79121437 MsG0880046855.01.T01:intron 55.0%
GAGTTCAGCTGGATGCTTCC+AGG - Chr8:79120061-79120080 MsG0880046855.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79119849 79121791 79119849 ID=MsG0880046855.01;Name=MsG0880046855.01
Chr8 mRNA 79119849 79121791 79119849 ID=MsG0880046855.01.T01;Parent=MsG0880046855.01;Name=MsG0880046855.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|4|0|351
Chr8 exon 79121558 79121791 79121558 ID=MsG0880046855.01.T01:exon:19074;Parent=MsG0880046855.01.T01
Chr8 exon 79120842 79121089 79120842 ID=MsG0880046855.01.T01:exon:19073;Parent=MsG0880046855.01.T01
Chr8 exon 79120205 79120532 79120205 ID=MsG0880046855.01.T01:exon:19072;Parent=MsG0880046855.01.T01
Chr8 exon 79119849 79120094 79119849 ID=MsG0880046855.01.T01:exon:19071;Parent=MsG0880046855.01.T01
Chr8 CDS 79121558 79121791 79121558 ID=MsG0880046855.01.T01:cds;Parent=MsG0880046855.01.T01
Chr8 CDS 79120842 79121089 79120842 ID=MsG0880046855.01.T01:cds;Parent=MsG0880046855.01.T01
Chr8 CDS 79120205 79120532 79120205 ID=MsG0880046855.01.T01:cds;Parent=MsG0880046855.01.T01
Chr8 CDS 79119849 79120094 79119849 ID=MsG0880046855.01.T01:cds;Parent=MsG0880046855.01.T01
Gene Sequence

>MsG0880046855.01.T01

ATGGCCAACAATTTACTTGTTTCAGAGGAGAAATCACTTCCAAGGAGTGTCCAAGAAATGTCTATGGATGGTGATGAACCACCATCACAATATTTAGTTAATGGAAATGTCTTTGGATCTAAAGAAGATTCTTCAACACTCATTCCAATACCAATAATTGATGTAAGTCTTCTTTCAACAGAAGATGAGTTACAGAAGCTAAGATCTGCTCTGAGTTCAGCTGGATGCTTCCAGGCAATTGGTCACGACATGTCAATTTCATATCTTGACAAAGTACGTGAAGTTGCAAAACAATTTTTTGCACTTCCGGTTGAGGAAAAACAGAAATATGCACGAACTGTGAATGAATCTGAAGGGTATGGAAATGACAGAATAGTATCAGAGAAACAAGTCCTTGATTGGTCTTATCGCCTTACTCTTCGTGTTTTTCCAAAAGAAAAACGAAGGCTTTCTCTTTGGCCAGAAAACCCTAGTGATTTCAGTGATACATTAGAAGAGTTTTCAACCAAAGTGAAGTCAATGATGGATTATCTCTTGAGAAGCATGGCAAGGTCACTGAATTTGGAAGAAGGCAGTTTCTTGGATCAGTTTGGGATGCAATCATTATTCCAAGCAAGGATCAACTTCTATCCACCTTGTTCTAGACCTGATTTGGTTCTTGGTGTCAAACCTCACACTGATAGATCAGGAATCACAGTTTTATTACAAGACAGAGAAGTTGAAGGTCTTCAAGTTCTGATAGATGACAAATGGATCAATGTTCCTACAATACCTAATGCTCTTGTTGTCAATCTTGGCGACCAAATGCAGATTATGAGTAATGGAATATTCAAGAGCCCAATGCATAGGGTTGTGACAAATACAGAAAAGTTGAGAATGTCTATAGCAATGTTTAATGAGCCAGAACCAGAGAACAAAATTGGACCTGTTGAAGGACTGATAAATGAGACACGTCCAAGGGTGTATAAAAATGTCAAAAATTATGGTGATATTAACTATAGGTGCTATCAAGAGGGGAAAATAGCACTTGATACTGTCAAAATGACAGATAACTAG
Protein sequence

>MsG0880046855.01.T01

MANNLLVSEEKSLPRSVQEMSMDGDEPPSQYLVNGNVFGSKEDSSTLIPIPIIDVSLLSTEDELQKLRSALSSAGCFQAIGHDMSISYLDKVREVAKQFFALPVEEKQKYARTVNESEGYGNDRIVSEKQVLDWSYRLTLRVFPKEKRRLSLWPENPSDFSDTLEEFSTKVKSMMDYLLRSMARSLNLEEGSFLDQFGMQSLFQARINFYPPCSRPDLVLGVKPHTDRSGITVLLQDREVEGLQVLIDDKWINVPTIPNALVVNLGDQMQIMSNGIFKSPMHRVVTNTEKLRMSIAMFNEPEPENKIGPVEGLINETRPRVYKNVKNYGDINYRCYQEGKIALDTVKMTDN*