AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046899.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046899.01.T01 MTR_4g116790 96.050 481 8 1 1 481 54 523 0.0 941
MsG0880046899.01.T01 MTR_0204s0040 90.217 460 34 1 1 460 56 504 0.0 854
MsG0880046899.01.T01 MTR_4g116770 90.217 460 34 1 1 460 252 700 0.0 854
MsG0880046899.01.T01 MTR_0204s0020 80.963 457 76 1 1 457 45 490 0.0 772
MsG0880046899.01.T01 MTR_0204s0020 80.963 457 76 1 1 457 48 493 0.0 771
MsG0880046899.01.T01 MTR_7g091690 78.788 462 87 1 1 462 54 504 0.0 748
MsG0880046899.01.T01 MTR_5g094760 77.489 462 93 1 1 462 54 504 0.0 736
MsG0880046899.01.T01 MTR_4g116790 95.356 323 4 1 1 323 54 365 0.0 628
MsG0880046899.01.T01 MTR_5g006070 52.510 478 211 5 1 473 49 515 0.0 537
MsG0880046899.01.T01 MTR_5g006070 52.510 478 211 5 1 473 1 467 0.0 537
MsG0880046899.01.T01 MTR_6g087040 55.195 462 192 4 1 459 53 502 0.0 535
MsG0880046899.01.T01 MTR_6g088375 55.195 462 192 4 1 459 53 502 0.0 535
MsG0880046899.01.T01 MTR_3g008160 54.310 464 198 4 1 461 50 502 0.0 532
MsG0880046899.01.T01 MTR_3g008160 54.310 464 198 4 1 461 1 453 0.0 532
MsG0880046899.01.T01 MTR_8g102860 54.624 465 196 4 1 462 53 505 0.0 524
MsG0880046899.01.T01 MTR_8g102860 54.624 465 196 4 1 462 1 453 0.0 523
MsG0880046899.01.T01 MTR_1g104770 50.649 462 210 6 1 456 50 499 2.30e-174 499
MsG0880046899.01.T01 MTR_3g008170 52.119 472 207 6 1 468 50 506 7.07e-174 498
MsG0880046899.01.T01 MTR_0009s0370 50.529 473 217 4 1 467 48 509 7.45e-173 496
MsG0880046899.01.T01 MTR_1g104750 49.130 460 219 5 1 456 50 498 1.33e-171 492
MsG0880046899.01.T01 MTR_1g104780 51.078 464 211 5 1 459 49 501 4.66e-170 489
MsG0880046899.01.T01 MTR_5g082540 51.836 463 205 5 1 458 50 499 5.82e-169 486
MsG0880046899.01.T01 MTR_5g041550 50.422 474 218 4 1 468 50 512 3.79e-165 476
MsG0880046899.01.T01 MTR_1g038630 50.324 463 212 5 1 458 50 499 1.63e-163 472
MsG0880046899.01.T01 MTR_3g093010 49.787 470 219 4 1 464 49 507 4.93e-162 468
MsG0880046899.01.T01 MTR_3g023480 48.637 477 222 6 1 467 48 511 2.08e-160 464
MsG0880046899.01.T01 MTR_4g091370 51.193 461 209 4 1 456 50 499 2.18e-157 457
MsG0880046899.01.T01 MTR_3g093060 48.156 461 221 4 1 454 1 450 2.45e-157 454
MsG0880046899.01.T01 MTR_1g038600 49.565 460 202 5 1 458 50 481 2.88e-155 451
MsG0880046899.01.T01 MTR_3g074390 48.472 458 220 5 1 454 55 500 2.91e-155 451
MsG0880046899.01.T01 MTR_3g074410 47.084 463 229 5 1 459 52 502 2.92e-153 446
MsG0880046899.01.T01 MTR_4g090600 51.073 466 212 4 1 461 50 504 6.01e-151 440
MsG0880046899.01.T01 MTR_3g007910 46.742 445 204 4 16 456 52 467 3.55e-148 432
MsG0880046899.01.T01 MTR_3g074270 46.476 454 212 4 1 453 50 473 2.75e-147 430
MsG0880046899.01.T01 MTR_3g074320 49.057 318 157 4 149 462 20 336 1.60e-110 331
MsG0880046899.01.T01 MTR_3g074340 48.742 318 158 4 149 462 20 336 5.81e-110 329
MsG0880046899.01.T01 MTR_3g074370 48.113 318 160 4 149 462 20 336 3.69e-108 325
MsG0880046899.01.T01 MTR_3g074380 47.385 325 157 4 1 323 53 365 1.85e-98 301
MsG0880046899.01.T01 MTR_3g074400 33.766 462 242 11 1 440 1 420 4.66e-82 260
MsG0880046899.01.T01 MTR_4g069500 29.149 470 297 9 26 471 13 470 1.24e-49 176
MsG0880046899.01.T01 MTR_4g069500 29.149 470 297 9 26 471 63 520 2.87e-49 177
MsG0880046899.01.T01 MTR_6g088450 28.471 425 275 10 26 436 91 500 1.04e-48 175
MsG0880046899.01.T01 MTR_4g072030 30.445 427 262 10 45 448 79 493 2.29e-47 171
MsG0880046899.01.T01 MTR_8g103500 28.029 421 271 9 38 442 63 467 5.30e-46 167
MsG0880046899.01.T01 MTR_3g084110 27.536 414 281 7 41 449 79 478 8.10e-45 164
MsG0880046899.01.T01 MTR_7g005910 28.058 417 276 8 57 467 100 498 9.53e-44 161
MsG0880046899.01.T01 MTR_1g116650 28.431 408 258 8 53 454 141 520 1.11e-42 159
MsG0880046899.01.T01 MTR_8g077890 28.571 441 277 10 39 455 65 491 2.81e-42 157
MsG0880046899.01.T01 MTR_3g116240 30.134 448 261 10 26 442 61 487 4.36e-42 157
MsG0880046899.01.T01 MTR_5g075300 27.419 434 279 8 39 449 65 485 1.20e-41 155
MsG0880046899.01.T01 MTR_4g077740 29.195 435 255 10 32 442 91 496 1.42e-41 155
MsG0880046899.01.T01 MTR_1g022315 28.571 420 276 7 33 447 89 489 4.57e-40 150
MsG0880046899.01.T01 MTR_6g018790 27.670 412 268 9 37 442 151 538 5.32e-40 151
MsG0880046899.01.T01 MTR_1g022315 28.676 408 267 7 45 447 2 390 1.03e-39 148
MsG0880046899.01.T01 MTR_8g077310 28.000 450 295 10 5 447 59 486 1.04e-39 150
MsG0880046899.01.T01 MTR_1g116660 26.366 421 279 10 53 462 98 498 1.30e-39 150
MsG0880046899.01.T01 MTR_7g446340 26.009 446 290 11 39 466 101 524 2.69e-39 149
MsG0880046899.01.T01 MTR_6g007340 26.009 446 290 11 39 466 101 524 2.69e-39 149
MsG0880046899.01.T01 MTR_7g082270 27.184 412 270 9 37 442 111 498 3.71e-39 149
MsG0880046899.01.T01 MTR_8g077310 28.780 410 263 10 45 447 2 389 1.40e-38 144
MsG0880046899.01.T01 MTR_1g038620 41.139 158 76 1 164 321 50 190 2.69e-38 138
MsG0880046899.01.T01 MTR_5g077580 26.400 500 256 11 33 442 69 546 5.43e-38 146
MsG0880046899.01.T01 MTR_2g013310 27.059 425 274 10 39 448 99 502 1.06e-37 145
MsG0880046899.01.T01 MTR_2g013310 27.059 425 274 10 39 448 26 429 1.24e-37 143
MsG0880046899.01.T01 MTR_7g094450 27.184 412 276 7 33 442 80 469 8.83e-37 141
MsG0880046899.01.T01 MTR_5g020270 27.619 420 279 9 33 447 90 489 3.45e-36 140
MsG0880046899.01.T01 MTR_5g020270 27.696 408 270 9 45 447 2 389 1.01e-35 137
MsG0880046899.01.T01 MTR_5g096000 50.725 138 67 1 319 456 162 298 1.22e-35 134
MsG0880046899.01.T01 MTR_5g096000 40.972 144 56 2 1 144 49 163 1.21e-24 104
MsG0880046899.01.T01 MTR_8g077300 28.810 420 272 8 33 445 79 478 7.87e-35 136
MsG0880046899.01.T01 MTR_2g049020 30.464 302 191 5 34 328 70 359 2.80e-34 135
MsG0880046899.01.T01 MTR_2g049020 37.500 112 59 3 351 454 457 565 8.93e-12 67.8
MsG0880046899.01.T01 MTR_7g094110 27.778 414 271 8 33 442 82 471 3.32e-34 134
MsG0880046899.01.T01 MTR_7g082270 26.685 356 238 6 37 390 111 445 4.44e-34 134
MsG0880046899.01.T01 MTR_4g069500 29.518 332 210 7 163 471 1 331 3.89e-33 128
MsG0880046899.01.T01 MTR_7g113970 26.747 415 274 9 33 442 102 491 5.61e-33 131
MsG0880046899.01.T01 MTR_3g080240 25.178 421 285 11 29 442 130 527 7.84e-33 131
MsG0880046899.01.T01 MTR_7g113960 26.265 415 274 9 33 442 67 454 2.30e-32 129
MsG0880046899.01.T01 MTR_2g048720 32.443 262 161 5 53 310 89 338 3.87e-32 129
MsG0880046899.01.T01 MTR_6g087910 26.108 406 265 9 41 442 108 482 1.49e-31 127
MsG0880046899.01.T01 MTR_5g019870 26.744 430 274 12 46 449 68 482 2.89e-31 126
MsG0880046899.01.T01 MTR_2g020710 26.651 424 264 13 33 442 89 479 1.10e-30 124
MsG0880046899.01.T01 MTR_2g020710 26.540 422 263 13 35 442 2 390 2.58e-30 122
MsG0880046899.01.T01 MTR_4g013205 25.553 407 268 9 44 442 89 468 1.51e-29 121
MsG0880046899.01.T01 MTR_5g020270 25.952 420 265 10 33 447 90 468 1.57e-29 120
MsG0880046899.01.T01 MTR_2g026160 29.642 307 188 5 53 346 90 381 2.91e-29 121
MsG0880046899.01.T01 MTR_2g026160 32.456 114 76 1 336 448 445 558 3.06e-11 66.2
MsG0880046899.01.T01 MTR_7g094110 26.812 414 255 8 33 442 82 451 9.82e-29 118
MsG0880046899.01.T01 MTR_4g118610 25.768 423 269 11 33 442 92 482 3.28e-28 117
MsG0880046899.01.T01 MTR_8g077310 25.978 358 239 8 5 358 59 394 5.81e-25 107
MsG0880046899.01.T01 MTR_1g114280 35.714 154 78 3 307 458 21 155 4.31e-24 98.6
MsG0880046899.01.T01 MTR_4g064820 30.645 310 178 11 36 325 147 439 1.50e-23 103
MsG0880046899.01.T01 MTR_2g026140 28.205 273 156 6 53 312 87 332 2.75e-22 100
MsG0880046899.01.T01 MTR_0064s0040 42.105 95 54 1 9 102 47 141 7.76e-21 89.4
MsG0880046899.01.T01 MTR_3g074330 39.344 122 64 3 1 113 50 170 1.54e-20 89.4
MsG0880046899.01.T01 MTR_3g074360 39.344 122 64 3 1 113 50 170 1.54e-20 89.4
MsG0880046899.01.T01 MTR_3g074310 39.344 122 64 3 1 113 50 170 1.72e-20 89.4
MsG0880046899.01.T01 MTR_7g113960 26.761 284 182 7 33 312 67 328 5.42e-20 92.0
MsG0880046899.01.T01 MTR_3g116060 29.891 184 113 3 41 221 52 222 2.01e-19 92.0
MsG0880046899.01.T01 MTR_7g113970 27.305 282 183 7 33 312 102 363 2.69e-19 90.5
MsG0880046899.01.T01 MTR_2g020710 25.634 355 217 13 33 373 89 410 2.72e-19 90.5
MsG0880046899.01.T01 MTR_2g020710 25.706 354 216 13 33 372 89 409 3.18e-19 90.1
MsG0880046899.01.T01 MTR_2g020710 26.460 291 173 10 33 311 89 350 2.09e-18 87.0
MsG0880046899.01.T01 MTR_5g024740 28.889 180 116 3 37 215 50 218 1.02e-16 83.6
MsG0880046899.01.T01 MTR_4g118610 24.859 354 221 11 33 373 92 413 1.65e-16 82.0
MsG0880046899.01.T01 MTR_3g118530 28.409 176 114 2 41 215 54 218 2.04e-16 82.8
MsG0880046899.01.T01 MTR_3g118530 28.194 227 146 5 226 440 500 721 1.60e-11 67.0
MsG0880046899.01.T01 MTR_3g118530 28.409 176 114 2 41 215 54 218 3.30e-16 81.6
MsG0880046899.01.T01 MTR_8g073100 23.194 263 167 5 40 294 53 288 5.15e-16 81.3
MsG0880046899.01.T01 MTR_5g044910 26.923 182 117 4 37 215 50 218 5.81e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046899.01.T01 AT4G02050 71.949 467 119 2 1 467 54 508 0.0 721
MsG0880046899.01.T01 AT4G02050 71.949 467 119 2 1 467 54 508 0.0 721
MsG0880046899.01.T01 AT5G26340 55.579 466 191 5 1 461 50 504 0.0 548
MsG0880046899.01.T01 AT1G77210 53.478 460 201 3 1 458 53 501 0.0 521
MsG0880046899.01.T01 AT1G77210 53.478 460 201 3 1 458 53 501 0.0 521
MsG0880046899.01.T01 AT3G19940 50.756 463 214 3 1 460 52 503 4.90e-180 514
MsG0880046899.01.T01 AT1G50310 51.613 465 208 5 1 460 52 504 1.45e-176 506
MsG0880046899.01.T01 AT3G19930 50.324 463 216 3 1 460 50 501 2.67e-171 492
MsG0880046899.01.T01 AT3G19930 50.324 463 216 3 1 460 50 501 2.67e-171 492
MsG0880046899.01.T01 AT1G11260 50.413 484 217 5 1 472 50 522 2.31e-169 488
MsG0880046899.01.T01 AT5G23270 51.634 459 206 4 1 454 51 498 1.11e-165 478
MsG0880046899.01.T01 AT4G21480 50.964 467 211 5 1 463 50 502 1.42e-164 474
MsG0880046899.01.T01 AT3G05960 47.939 461 227 3 1 459 48 497 4.30e-163 471
MsG0880046899.01.T01 AT5G26250 46.537 462 235 2 1 461 49 499 4.05e-162 469
MsG0880046899.01.T01 AT1G34580 48.373 461 219 5 1 454 1 449 4.53e-158 456
MsG0880046899.01.T01 AT1G34580 48.373 461 219 5 1 454 51 499 1.36e-157 457
MsG0880046899.01.T01 AT5G61520 47.619 462 223 5 1 455 3 452 1.28e-155 451
MsG0880046899.01.T01 AT5G61520 47.619 462 223 5 1 455 51 500 3.25e-155 451
MsG0880046899.01.T01 AT1G77210 54.830 352 157 2 112 462 5 355 1.55e-142 413
MsG0880046899.01.T01 AT1G50310 53.258 353 162 2 111 460 9 361 3.08e-140 408
MsG0880046899.01.T01 AT1G07340 46.004 463 231 6 1 458 50 498 1.61e-135 400
MsG0880046899.01.T01 AT2G18480 31.293 441 263 12 26 442 55 479 1.01e-52 186
MsG0880046899.01.T01 AT4G36670 28.602 465 287 9 26 468 50 491 6.64e-51 181
MsG0880046899.01.T01 AT2G16120 28.319 452 283 10 39 467 72 505 4.41e-47 171
MsG0880046899.01.T01 AT2G16130 28.341 434 275 9 39 449 72 492 5.63e-45 165
MsG0880046899.01.T01 AT3G18830 28.289 456 275 12 26 448 69 505 1.64e-43 161
MsG0880046899.01.T01 AT2G43330 29.557 406 260 8 53 449 94 482 1.93e-43 160
MsG0880046899.01.T01 AT1G75220 30.332 422 265 9 33 447 88 487 7.00e-43 159
MsG0880046899.01.T01 AT5G16150 26.650 409 276 6 37 442 151 538 1.94e-42 158
MsG0880046899.01.T01 AT5G16150 26.650 409 276 6 37 442 151 538 1.94e-42 158
MsG0880046899.01.T01 AT5G16150 26.650 409 276 6 37 442 151 538 1.94e-42 158
MsG0880046899.01.T01 AT1G19450 30.166 421 267 9 33 447 89 488 1.62e-41 155
MsG0880046899.01.T01 AT5G59250 31.935 429 245 13 36 442 149 552 1.55e-40 153
MsG0880046899.01.T01 AT2G48020 28.018 439 288 7 11 445 46 460 2.06e-40 151
MsG0880046899.01.T01 AT2G48020 28.018 439 288 7 11 445 46 460 2.06e-40 151
MsG0880046899.01.T01 AT3G03090 30.211 427 252 11 36 442 98 498 4.24e-40 151
MsG0880046899.01.T01 AT1G08900 28.606 416 265 7 33 442 23 412 1.49e-38 145
MsG0880046899.01.T01 AT1G08900 28.846 416 264 8 33 442 65 454 4.20e-38 145
MsG0880046899.01.T01 AT1G08900 28.846 416 264 8 33 442 65 454 4.20e-38 145
MsG0880046899.01.T01 AT1G08900 28.846 416 264 8 33 442 57 446 4.80e-38 144
MsG0880046899.01.T01 AT1G05030 26.824 425 275 11 28 442 63 461 1.24e-37 144
MsG0880046899.01.T01 AT5G17010 30.070 429 251 10 36 442 97 498 1.26e-37 144
MsG0880046899.01.T01 AT5G17010 30.070 429 251 10 36 442 97 498 1.26e-37 144
MsG0880046899.01.T01 AT5G17010 30.070 429 251 10 36 442 97 498 1.26e-37 144
MsG0880046899.01.T01 AT1G05030 27.358 424 272 12 29 442 116 513 1.69e-37 144
MsG0880046899.01.T01 AT5G27360 26.442 416 274 8 33 442 75 464 2.18e-37 143
MsG0880046899.01.T01 AT5G27360 26.442 416 274 8 33 442 123 512 4.68e-37 143
MsG0880046899.01.T01 AT1G08890 28.230 418 264 8 33 442 67 456 5.50e-37 142
MsG0880046899.01.T01 AT5G27350 26.905 420 267 8 33 442 71 460 1.16e-36 141
MsG0880046899.01.T01 AT2G20780 27.252 444 281 13 38 463 100 519 2.00e-36 141
MsG0880046899.01.T01 AT3G05155 26.150 413 277 9 33 442 67 454 3.00e-36 140
MsG0880046899.01.T01 AT2G20780 26.652 469 294 14 13 463 25 461 3.85e-36 139
MsG0880046899.01.T01 AT5G27360 26.954 371 239 7 78 442 16 360 2.35e-35 135
MsG0880046899.01.T01 AT5G27360 26.954 371 239 7 78 442 16 360 2.35e-35 135
MsG0880046899.01.T01 AT1G08930 26.506 415 275 10 33 442 98 487 2.78e-35 137
MsG0880046899.01.T01 AT1G08930 26.506 415 275 10 33 442 98 487 2.78e-35 137
MsG0880046899.01.T01 AT3G05165 27.033 418 269 8 33 442 70 459 2.89e-35 137
MsG0880046899.01.T01 AT3G05165 27.033 418 269 8 33 442 70 459 2.89e-35 137
MsG0880046899.01.T01 AT3G05165 27.033 418 269 8 33 442 70 459 2.89e-35 137
MsG0880046899.01.T01 AT3G05400 25.829 422 277 9 33 445 66 460 1.62e-33 132
MsG0880046899.01.T01 AT3G05160 26.128 421 269 9 33 442 12 401 3.61e-33 130
MsG0880046899.01.T01 AT3G05160 26.128 421 269 9 33 442 12 401 3.61e-33 130
MsG0880046899.01.T01 AT3G05160 26.128 421 269 9 33 442 61 450 5.89e-33 130
MsG0880046899.01.T01 AT5G18840 26.807 429 271 9 33 449 84 481 7.59e-33 130
MsG0880046899.01.T01 AT1G08900 28.800 375 235 8 33 401 65 413 1.61e-32 129
MsG0880046899.01.T01 AT3G05400 26.972 393 247 10 66 445 75 440 8.63e-31 124
MsG0880046899.01.T01 AT1G08920 27.187 423 262 10 33 442 72 461 9.15e-31 124
MsG0880046899.01.T01 AT1G54730 24.940 417 283 8 33 444 72 463 2.34e-30 123
MsG0880046899.01.T01 AT1G30220 30.303 264 165 5 56 312 94 345 2.41e-30 124
MsG0880046899.01.T01 AT4G04760 26.747 415 277 9 33 442 12 404 3.29e-30 122
MsG0880046899.01.T01 AT3G05165 26.944 360 231 8 33 386 70 403 6.05e-30 122
MsG0880046899.01.T01 AT1G08920 26.977 430 261 10 33 442 72 468 6.06e-30 122
MsG0880046899.01.T01 AT4G04750 25.604 414 282 8 33 442 76 467 6.39e-30 122
MsG0880046899.01.T01 AT4G04750 25.604 414 282 8 33 442 76 467 6.39e-30 122
MsG0880046899.01.T01 AT4G04750 25.604 414 282 8 33 442 120 511 6.54e-30 122
MsG0880046899.01.T01 AT4G16480 30.690 290 173 6 53 329 90 364 6.55e-30 123
MsG0880046899.01.T01 AT4G16480 30.690 290 173 6 53 329 90 364 6.55e-30 123
MsG0880046899.01.T01 AT4G16480 30.690 290 173 6 53 329 90 364 6.55e-30 123
MsG0880046899.01.T01 AT4G04760 26.747 415 277 9 33 442 71 463 6.81e-30 122
MsG0880046899.01.T01 AT3G05165 27.424 361 226 8 33 385 70 402 8.15e-30 122
MsG0880046899.01.T01 AT3G05165 27.424 361 226 8 33 385 70 402 8.15e-30 122
MsG0880046899.01.T01 AT3G05150 26.415 424 279 9 33 448 75 473 1.53e-29 121
MsG0880046899.01.T01 AT1G79820 25.845 414 272 10 37 442 100 486 3.46e-29 120
MsG0880046899.01.T01 AT1G79820 25.845 414 272 10 37 442 100 486 3.46e-29 120
MsG0880046899.01.T01 AT3G05150 26.202 416 276 8 33 442 75 465 5.08e-29 119
MsG0880046899.01.T01 AT3G05150 26.202 416 276 8 33 442 75 465 5.08e-29 119
MsG0880046899.01.T01 AT2G35740 31.095 283 173 6 56 328 92 362 8.54e-29 120
MsG0880046899.01.T01 AT1G67300 25.553 407 271 10 44 442 104 486 8.30e-27 113
MsG0880046899.01.T01 AT1G67300 25.553 407 270 9 44 442 104 485 1.44e-26 112
MsG0880046899.01.T01 AT1G67300 25.553 407 270 9 44 442 104 485 1.44e-26 112
MsG0880046899.01.T01 AT1G08920 27.441 379 229 10 33 398 72 417 3.45e-26 111
MsG0880046899.01.T01 AT4G04760 25.783 415 278 10 33 442 71 460 5.44e-26 110
MsG0880046899.01.T01 AT1G67300 24.501 351 239 6 44 390 104 432 1.01e-25 109
MsG0880046899.01.T01 AT1G67300 24.501 351 239 6 44 390 104 432 1.01e-25 109
MsG0880046899.01.T01 AT5G27360 24.929 353 233 8 33 379 75 401 1.20e-25 109
MsG0880046899.01.T01 AT2G48020 28.349 321 204 6 11 327 46 344 3.55e-25 107
MsG0880046899.01.T01 AT1G67300 24.927 341 230 6 44 380 104 422 6.51e-25 107
MsG0880046899.01.T01 AT1G67300 24.927 341 230 6 44 380 104 422 6.51e-25 107
MsG0880046899.01.T01 AT1G79820 25.140 358 240 8 37 390 100 433 8.57e-25 107
MsG0880046899.01.T01 AT1G54730 24.460 417 264 9 33 444 72 442 2.08e-24 105
MsG0880046899.01.T01 AT2G48020 28.097 331 206 7 11 337 46 348 4.04e-24 103
MsG0880046899.01.T01 AT1G54730 23.797 374 255 8 33 401 72 420 5.98e-24 104
MsG0880046899.01.T01 AT3G05155 27.208 283 179 8 33 312 67 325 2.03e-21 95.5
MsG0880046899.01.T01 AT3G20460 23.206 418 285 10 33 442 93 482 3.12e-20 94.0
MsG0880046899.01.T01 AT5G17010 25.592 422 216 12 36 443 99 436 2.76e-19 90.5
MsG0880046899.01.T01 AT1G79820 23.913 414 232 10 37 442 100 438 4.11e-19 90.1
MsG0880046899.01.T01 AT3G51490 28.743 167 107 2 50 215 13 168 5.28e-19 90.5
MsG0880046899.01.T01 AT3G51490 30.769 234 124 9 232 443 450 667 6.14e-13 71.6
MsG0880046899.01.T01 AT3G51490 28.743 167 107 2 50 215 63 218 5.35e-19 90.9
MsG0880046899.01.T01 AT3G51490 28.743 167 107 2 50 215 63 218 6.51e-19 90.5
MsG0880046899.01.T01 AT3G51490 30.769 234 124 9 232 443 500 717 5.62e-13 72.0
MsG0880046899.01.T01 AT1G54730 23.121 346 236 8 33 373 72 392 2.72e-18 87.4
MsG0880046899.01.T01 AT1G54730 23.121 346 236 8 33 373 72 392 2.72e-18 87.4
MsG0880046899.01.T01 AT1G54730 24.561 285 187 7 33 312 72 333 2.11e-17 84.0
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.22e-15 79.0
MsG0880046899.01.T01 AT4G35300 25.952 289 170 8 191 440 427 710 8.49e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.22e-15 79.0
MsG0880046899.01.T01 AT4G35300 25.952 289 170 8 191 440 427 710 8.49e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.22e-15 79.0
MsG0880046899.01.T01 AT4G35300 25.952 289 170 8 191 440 427 710 8.49e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT4G35300 29.560 159 100 2 58 215 71 218 3.30e-15 79.0
MsG0880046899.01.T01 AT4G35300 26.639 244 155 5 216 440 482 720 8.55e-11 65.1
MsG0880046899.01.T01 AT1G79820 24.011 379 205 10 72 442 73 376 3.46e-15 77.8
MsG0880046899.01.T01 AT1G20840 26.966 178 114 3 41 215 52 216 2.67e-14 75.9
MsG0880046899.01.T01 AT1G20840 26.966 178 114 3 41 215 52 216 2.67e-14 75.9
MsG0880046899.01.T01 AT4G35300 27.711 249 146 8 216 440 285 523 6.27e-11 65.1

Find 116 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTCCACTTTATACATTTC+TGG 0.121798 8:+79663667 MsG0880046899.01.T01:CDS
GGTTATAGTTGCCATAATTT+TGG 0.155152 8:+79665589 MsG0880046899.01.T01:intron
TCTCTATTTGTTCTAGCTTT+TGG 0.158687 8:+79665677 MsG0880046899.01.T01:CDS
CCTCTTTCTACTAAGCTATT+TGG 0.164253 8:-79664408 None:intergenic
ATGGGTATTCCCTTGGTTTC+AGG 0.183745 8:-79665917 None:intergenic
TTGAGGAGATGTCATTTATT+TGG 0.186753 8:+79665939 MsG0880046899.01.T01:CDS
CTTATCAACATTTATTTCTA+TGG 0.203337 8:+79664728 MsG0880046899.01.T01:CDS
TTTCAAGTTGCAACCACTTT+TGG 0.229077 8:+79664255 MsG0880046899.01.T01:CDS
CTTTCAAGGATGTTATAATA+AGG 0.231623 8:-79664543 None:intergenic
CTTCTATGTTCATTCAAGTA+TGG 0.244617 8:+79665833 MsG0880046899.01.T01:CDS
CGTAATTGGAGCTGCGACTA+TGG 0.250328 8:-79663701 None:intergenic
CAAGGTGTTGGCATTGGATT+TGG 0.260022 8:+79663838 MsG0880046899.01.T01:CDS
TTTGGAGAAAACACTGGTTT+TGG 0.279505 8:+79665957 MsG0880046899.01.T01:CDS
CGTCCATACCTCCTCGTAAT+TGG 0.296268 8:-79663715 None:intergenic
GATAAACTATCCCAGGATTC+TGG 0.298666 8:+79666004 MsG0880046899.01.T01:CDS
AAGCTTGACACCCAAAATTA+TGG 0.313711 8:-79665600 None:intergenic
CAACTTGAAACATCATGTTC+AGG 0.330806 8:-79664242 None:intergenic
AGTTTATGCCGGTCAGAATC+TGG 0.339081 8:-79664611 None:intergenic
TTTCAAGGATGTTATAATAA+GGG 0.361511 8:-79664542 None:intergenic
CGAAGGACAAGTATCATAAT+TGG 0.372241 8:+79663736 MsG0880046899.01.T01:CDS
ACAGCAAATATGATCAATTA+CGG 0.372765 8:+79664285 MsG0880046899.01.T01:CDS
ACTAAGCTATTTGGAGTCTC+TGG 0.381941 8:-79664399 None:intergenic
CTCCTCAATGGGTATTCCCT+TGG 0.381990 8:-79665924 None:intergenic
CTATTTCAAAGCATGGGATT+TGG 0.384556 8:+79664657 MsG0880046899.01.T01:CDS
CTGGTCTGTATCTTCTTTCA+AGG 0.389365 8:-79664557 None:intergenic
CATACTTGAATGAACATAGA+AGG 0.393127 8:-79665832 None:intergenic
GGTGGTGTCAACTTTCTTGT+TGG 0.393931 8:+79663757 MsG0880046899.01.T01:CDS
CCTGCTGATCGGATTTCTAA+TGG 0.405769 8:-79665746 None:intergenic
GAGCGGAATAGCCTTCAAAA+AGG 0.410958 8:-79664181 None:intergenic
TATGGCAACAGTAGATAGAT+TGG 0.418748 8:+79664746 MsG0880046899.01.T01:CDS
CTTTACTCCTCAGCCTTGAC+TGG 0.419029 8:+79664693 MsG0880046899.01.T01:CDS
CACCCGCATCAAGCATATCT+TGG 0.420506 8:-79664497 None:intergenic
TTAATTCAGTTCCAGAATCC+TGG 0.428601 8:-79666015 None:intergenic
AATAAATGACATCTCCTCAA+TGG 0.430704 8:-79665936 None:intergenic
AATTTATGTTTGTACACTGC+AGG 0.433632 8:-79663589 None:intergenic
CATAGAAATAAATGTTGATA+AGG 0.434612 8:-79664727 None:intergenic
TATGCTTGATGCGGGTGAAT+TGG 0.436110 8:+79664503 MsG0880046899.01.T01:CDS
TATTCCACCACTGATGAGTA+AGG 0.437416 8:-79664778 None:intergenic
GATCTGGAAATGCTTATCAT+AGG 0.451030 8:+79663805 MsG0880046899.01.T01:CDS
CTATTGCAAGTATAACAATC+AGG 0.452140 8:+79663630 MsG0880046899.01.T01:CDS
TGGCATTGGATTTGGAAATC+AGG 0.453047 8:+79663846 MsG0880046899.01.T01:CDS
GAATGCTGCAGCTATTGATC+TGG 0.453163 8:+79663789 MsG0880046899.01.T01:CDS
ATGGCAACAGTAGATAGATT+GGG 0.457862 8:+79664747 MsG0880046899.01.T01:CDS
TTCTATGTTCATTCAAGTAT+GGG 0.463741 8:+79665834 MsG0880046899.01.T01:CDS
ATAAATGACATCTCCTCAAT+GGG 0.464417 8:-79665935 None:intergenic
CCATTAGAAATCCGATCAGC+AGG 0.467191 8:+79665746 MsG0880046899.01.T01:CDS
AATACAAATGATTATATGCC+AGG 0.482659 8:+79664797 MsG0880046899.01.T01:CDS
CCAAATAGCTTAGTAGAAAG+AGG 0.485512 8:+79664408 MsG0880046899.01.T01:CDS
TCCAATGCTATTTCAAAGCA+TGG 0.486346 8:+79664650 MsG0880046899.01.T01:CDS
AACTTGAAACATCATGTTCA+GGG 0.494984 8:-79664241 None:intergenic
TCCGCTCTATTTGTCAGAGA+TGG 0.495251 8:+79664197 MsG0880046899.01.T01:CDS
CTTAGTAGAAAGAGGATCAA+AGG 0.496256 8:+79664416 MsG0880046899.01.T01:CDS
GCTCCAATTACGAGGAGGTA+TGG 0.496906 8:+79663712 MsG0880046899.01.T01:CDS
TGTTCAGGGCTCCTCGAAAG+TGG 0.506751 8:-79664227 None:intergenic
CAGATAGCCATGACCAACTC+TGG 0.508316 8:-79664576 None:intergenic
CCCATGCTTTGAAATAGCAT+TGG 0.511458 8:-79664651 None:intergenic
TTTGTTCCTGCCTGAAACCA+AGG 0.516762 8:+79665907 MsG0880046899.01.T01:CDS
TAATTCAGTTCCAGAATCCT+GGG 0.522346 8:-79666014 None:intergenic
GAAACCAGAAATGTATAAAG+TGG 0.523828 8:-79663671 None:intergenic
TCTAATGGAAATATCTCACT+TGG 0.524533 8:-79665731 None:intergenic
CCGGTCAGAATCTGGAATGC+AGG 0.531931 8:-79664603 None:intergenic
ATGGCGCCAACCCACTTTCG+AGG 0.533152 8:+79664216 MsG0880046899.01.T01:CDS
TTGGTATTGCAGCAAGTCCA+AGG 0.533928 8:-79664344 None:intergenic
TGGAAATGCTTATCATAGGA+AGG 0.538471 8:+79663809 MsG0880046899.01.T01:CDS
GTTCACTTTCATAATCGCAC+AGG 0.540262 8:+79665799 MsG0880046899.01.T01:CDS
TGATACTCTGCCCTGCTGAT+CGG 0.543281 8:-79665757 None:intergenic
AACACAACAGATTCAACCAT+GGG 0.544176 8:+79664308 MsG0880046899.01.T01:CDS
CAGTAGATAGATTGGGGCGA+CGG 0.554791 8:+79664754 MsG0880046899.01.T01:CDS
CATTTATTTGGAGAAAACAC+TGG 0.558016 8:+79665951 MsG0880046899.01.T01:CDS
TTCCAAGATATGCTTGATGC+GGG 0.559587 8:+79664495 MsG0880046899.01.T01:CDS
TATTGCAAGTATAACAATCA+GGG 0.559845 8:+79663631 MsG0880046899.01.T01:CDS
AAAGAGAATTGAGTTTATGC+CGG 0.562491 8:-79664622 None:intergenic
CCAATGCTATTTCAAAGCAT+GGG 0.562491 8:+79664651 MsG0880046899.01.T01:CDS
TGATGCAGATAAACTATCCC+AGG 0.566651 8:+79665997 MsG0880046899.01.T01:CDS
TTGTTCCTGCCTGAAACCAA+GGG 0.566827 8:+79665908 MsG0880046899.01.T01:CDS
GTATTCCCTTGGTTTCAGGC+AGG 0.568401 8:-79665913 None:intergenic
CAGGAACAAAACAACAAAGA+TGG 0.571073 8:-79665894 None:intergenic
AGGGCTCCTCGAAAGTGGGT+TGG 0.572521 8:-79664222 None:intergenic
GATAGTTTATCTGCATCATC+CGG 0.572736 8:-79665992 None:intergenic
GAAAGAGGATCAAAGGAACA+AGG 0.585844 8:+79664423 MsG0880046899.01.T01:CDS
CCTGCATTCCAGATTCTGAC+CGG 0.587622 8:+79664603 MsG0880046899.01.T01:CDS
ATTCTGAAGAAAGTCATCCA+TGG 0.587886 8:-79663560 None:intergenic
AACTACTCCAGTCAAGGCTG+AGG 0.591639 8:-79664700 None:intergenic
GGAAATGCTTATCATAGGAA+GGG 0.595076 8:+79663810 MsG0880046899.01.T01:CDS
ATACTTGAATGAACATAGAA+GGG 0.596423 8:-79665831 None:intergenic
ATTTATGTTTGTACACTGCA+GGG 0.596961 8:-79663588 None:intergenic
GGCAAGAACTACTCCAGTCA+AGG 0.599811 8:-79664706 None:intergenic
AAGAAGATACAGACCAGAGT+TGG 0.600151 8:+79664563 MsG0880046899.01.T01:CDS
CCGACAGTCATCAAAAGAGT+TGG 0.602717 8:-79664363 None:intergenic
AGGACAAGTATCATAATTGG+TGG 0.605114 8:+79663739 MsG0880046899.01.T01:CDS
GTTCAGGGCTCCTCGAAAGT+GGG 0.610543 8:-79664226 None:intergenic
AACTTAGATGCACATGAACA+TGG 0.612011 8:+79666040 MsG0880046899.01.T01:CDS
CTAATGGAAATATCTCACTT+GGG 0.617372 8:-79665730 None:intergenic
CTTGGGACTGTCCATCCAAG+TGG 0.623745 8:-79665713 None:intergenic
GTTCCAAGATATGCTTGATG+CGG 0.624448 8:+79664494 MsG0880046899.01.T01:CDS
AACAACAAAGATGGTCATGA+CGG 0.624505 8:-79665885 None:intergenic
CGACGGCCCTTACTCATCAG+TGG 0.624926 8:+79664771 MsG0880046899.01.T01:CDS
AAAGAGGATCAAAGGAACAA+GGG 0.626112 8:+79664424 MsG0880046899.01.T01:CDS
ACCAGAAATGTATAAAGTGG+AGG 0.629201 8:-79663668 None:intergenic
CGGCCCTTACTCATCAGTGG+TGG 0.632426 8:+79664774 MsG0880046899.01.T01:CDS
TGAATGAACATAGAAGGGAC+AGG 0.634042 8:-79665826 None:intergenic
TGGTATTGCAGCAAGTCCAA+GGG 0.636932 8:-79664343 None:intergenic
CATTAGAAATCCGATCAGCA+GGG 0.637741 8:+79665747 MsG0880046899.01.T01:CDS
AACCAAGGGAATACCCATTG+AGG 0.641567 8:+79665922 MsG0880046899.01.T01:CDS
TGGCAACAGTAGATAGATTG+GGG 0.643167 8:+79664748 MsG0880046899.01.T01:CDS
GAGGATCAAAGGAACAAGGG+AGG 0.647161 8:+79664427 MsG0880046899.01.T01:CDS
ATACAGACCAGAGTTGGTCA+TGG 0.647653 8:+79664569 MsG0880046899.01.T01:CDS
ATTCCACCACTGATGAGTAA+GGG 0.657134 8:-79664777 None:intergenic
ATTGCAAGTATAACAATCAG+GGG 0.662539 8:+79663632 MsG0880046899.01.T01:CDS
TAGTCGCAGCTCCAATTACG+AGG 0.664767 8:+79663704 MsG0880046899.01.T01:CDS
GAACACAACAGATTCAACCA+TGG 0.681447 8:+79664307 MsG0880046899.01.T01:CDS
GCCATCTCTGACAAATAGAG+CGG 0.685820 8:-79664198 None:intergenic
TTACGAGGAGGTATGGACGA+AGG 0.709098 8:+79663719 MsG0880046899.01.T01:CDS
TCGCAGCTCCAATTACGAGG+AGG 0.724034 8:+79663707 MsG0880046899.01.T01:CDS
ACACAACAGATTCAACCATG+GGG 0.726161 8:+79664309 MsG0880046899.01.T01:CDS
CACAACAGATTCAACCATGG+GGG 0.741883 8:+79664310 MsG0880046899.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATATTTTTATATAAAACAT+TGG + Chr8:79663919-79663938 MsG0880046899.01.T01:intron 10.0%
!! ATATAAAAATATCTTGCATT+TGG - Chr8:79663912-79663931 None:intergenic 15.0%
!! TATGGATAAAAGATTAATAT+AGG - Chr8:79663884-79663903 None:intergenic 15.0%
!!! ATTAACAATTTACAATTTTG+GGG + Chr8:79665376-79665395 MsG0880046899.01.T01:intron 15.0%
!!! ATTCTAAAATTGTTAAATGT+CGG + Chr8:79664996-79665015 MsG0880046899.01.T01:intron 15.0%
!!! GATTAACAATTTACAATTTT+GGG + Chr8:79665375-79665394 MsG0880046899.01.T01:intron 15.0%
!!! TGATTAACAATTTACAATTT+TGG + Chr8:79665374-79665393 MsG0880046899.01.T01:intron 15.0%
!! ATGAAATTTAAATCATCTCA+GGG - Chr8:79665239-79665258 None:intergenic 20.0%
!! CATAGAAATAAATGTTGATA+AGG - Chr8:79664730-79664749 None:intergenic 20.0%
!! GTCAAAAAACTATTCAATAT+CGG + Chr8:79665640-79665659 MsG0880046899.01.T01:CDS 20.0%
!! TATGAAATTTAAATCATCTC+AGG - Chr8:79665240-79665259 None:intergenic 20.0%
!! TGAGATGATTTAAATTTCAT+AGG + Chr8:79665239-79665258 MsG0880046899.01.T01:intron 20.0%
!! TTTCAAGGATGTTATAATAA+GGG - Chr8:79664545-79664564 None:intergenic 20.0%
!!! AATAGTTTTTTGACAATTCT+TGG - Chr8:79665634-79665653 None:intergenic 20.0%
!!! ATTATACTATACCTTTTTGA+AGG + Chr8:79664170-79664189 MsG0880046899.01.T01:CDS 20.0%
!!! CAAATTTTACAGGAAAAAAA+GGG + Chr8:79664085-79664104 MsG0880046899.01.T01:intron 20.0%
!!! CTTATCAACATTTATTTCTA+TGG + Chr8:79664728-79664747 MsG0880046899.01.T01:CDS 20.0%
!!! TCAAATTTTACAGGAAAAAA+AGG + Chr8:79664084-79664103 MsG0880046899.01.T01:intron 20.0%
!!! TTTTGAACATGATATTGATA+TGG - Chr8:79663975-79663994 None:intergenic 20.0%
! AAAATATCTTGCATTTGGTT+AGG - Chr8:79663907-79663926 None:intergenic 25.0%
! AATAATTGCACCATTCATTT+AGG + Chr8:79664899-79664918 MsG0880046899.01.T01:intron 25.0%
! AATACAAATGATTATATGCC+AGG + Chr8:79664797-79664816 MsG0880046899.01.T01:CDS 25.0%
! ACAGCAAATATGATCAATTA+CGG + Chr8:79664285-79664304 MsG0880046899.01.T01:CDS 25.0%
! ATACTTGAATGAACATAGAA+GGG - Chr8:79665834-79665853 None:intergenic 25.0%
! ATCATTATGTCAAAAAGTCA+TGG - Chr8:79664871-79664890 None:intergenic 25.0%
! CTTTCAAGGATGTTATAATA+AGG - Chr8:79664546-79664565 None:intergenic 25.0%
! TATTGCAAGTATAACAATCA+GGG + Chr8:79663631-79663650 MsG0880046899.01.T01:CDS 25.0%
! TTCTATGTTCATTCAAGTAT+GGG + Chr8:79665834-79665853 MsG0880046899.01.T01:CDS 25.0%
! TTTGTCAATTTGCAAAAGTA+TGG - Chr8:79664973-79664992 None:intergenic 25.0%
!! GTTATAGTTGCCATAATTTT+GGG + Chr8:79665590-79665609 MsG0880046899.01.T01:CDS 25.0%
!!! TCACTTTTTAAAGCTACATT+AGG - Chr8:79664027-79664046 None:intergenic 25.0%
!!! TTTTTTGACAATTCTTGGTT+TGG - Chr8:79665629-79665648 None:intergenic 25.0%
AAAAAAGGGTAGTAATGTGA+TGG + Chr8:79664099-79664118 MsG0880046899.01.T01:intron 30.0%
AAAGAGAATTGAGTTTATGC+CGG - Chr8:79664625-79664644 None:intergenic 30.0%
AAATGATTATATGCCAGGTA+TGG + Chr8:79664802-79664821 MsG0880046899.01.T01:intron 30.0%
AACTTGAAACATCATGTTCA+GGG - Chr8:79664244-79664263 None:intergenic 30.0%
AATAAATGACATCTCCTCAA+TGG - Chr8:79665939-79665958 None:intergenic 30.0%
AATTTATGTTTGTACACTGC+AGG - Chr8:79663592-79663611 None:intergenic 30.0%
ATAAATGACATCTCCTCAAT+GGG - Chr8:79665938-79665957 None:intergenic 30.0%
ATTGCAAGTATAACAATCAG+GGG + Chr8:79663632-79663651 MsG0880046899.01.T01:CDS 30.0%
ATTTATGTTTGTACACTGCA+GGG - Chr8:79663591-79663610 None:intergenic 30.0%
CATACTTGAATGAACATAGA+AGG - Chr8:79665835-79665854 None:intergenic 30.0%
CATTTATTTGGAGAAAACAC+TGG + Chr8:79665951-79665970 MsG0880046899.01.T01:CDS 30.0%
CTAATGGAAATATCTCACTT+GGG - Chr8:79665733-79665752 None:intergenic 30.0%
CTATCGGTAAAAATATACAG+AGG - Chr8:79665054-79665073 None:intergenic 30.0%
CTATTGCAAGTATAACAATC+AGG + Chr8:79663630-79663649 MsG0880046899.01.T01:CDS 30.0%
CTCTAAATGATTGAGTGAAT+AGG - Chr8:79665470-79665489 None:intergenic 30.0%
CTTCTATGTTCATTCAAGTA+TGG + Chr8:79665833-79665852 MsG0880046899.01.T01:CDS 30.0%
GAAACCAGAAATGTATAAAG+TGG - Chr8:79663674-79663693 None:intergenic 30.0%
TAAAGCTACATTAGGTACTA+TGG - Chr8:79664019-79664038 None:intergenic 30.0%
TACACCAATGTAACTTACTA+GGG - Chr8:79665274-79665293 None:intergenic 30.0%
TCTAATGGAAATATCTCACT+TGG - Chr8:79665734-79665753 None:intergenic 30.0%
! GGTTATAGTTGCCATAATTT+TGG + Chr8:79665589-79665608 MsG0880046899.01.T01:intron 30.0%
! TAATGTGATGGAAACAATCA+GGG + Chr8:79664111-79664130 MsG0880046899.01.T01:intron 30.0%
! TTGAGGAGATGTCATTTATT+TGG + Chr8:79665939-79665958 MsG0880046899.01.T01:CDS 30.0%
!! TGTAGAGTGTCAAATTTTAC+AGG + Chr8:79664075-79664094 MsG0880046899.01.T01:intron 30.0%
!!! TATTTGTTCTAGCTTTTGGA+TGG + Chr8:79665681-79665700 MsG0880046899.01.T01:CDS 30.0%
!!! TCTCTATTTGTTCTAGCTTT+TGG + Chr8:79665677-79665696 MsG0880046899.01.T01:CDS 30.0%
AAAAATCAGAGGAACAGATG+AGG + Chr8:79664461-79664480 MsG0880046899.01.T01:CDS 35.0%
AAAGAGGATCAAAGGAACAA+GGG + Chr8:79664424-79664443 MsG0880046899.01.T01:CDS 35.0%
AACAACAAAGATGGTCATGA+CGG - Chr8:79665888-79665907 None:intergenic 35.0%
AACACAACAGATTCAACCAT+GGG + Chr8:79664308-79664327 MsG0880046899.01.T01:CDS 35.0%
AACTTAGATGCACATGAACA+TGG + Chr8:79666040-79666059 MsG0880046899.01.T01:CDS 35.0%
AAGCTCCTTGAAAAAATCAG+AGG + Chr8:79664450-79664469 MsG0880046899.01.T01:CDS 35.0%
AAGCTTGACACCCAAAATTA+TGG - Chr8:79665603-79665622 None:intergenic 35.0%
ACCAGAAATGTATAAAGTGG+AGG - Chr8:79663671-79663690 None:intergenic 35.0%
ACCTCCACTTTATACATTTC+TGG + Chr8:79663667-79663686 MsG0880046899.01.T01:CDS 35.0%
AGGACAAGTATCATAATTGG+TGG + Chr8:79663739-79663758 MsG0880046899.01.T01:CDS 35.0%
AGGCAAATTACTCCATGATA+TGG - Chr8:79665141-79665160 None:intergenic 35.0%
ATCTTGCATTTGGTTAGGTA+TGG - Chr8:79663902-79663921 None:intergenic 35.0%
ATGGCAACAGTAGATAGATT+GGG + Chr8:79664747-79664766 MsG0880046899.01.T01:CDS 35.0%
ATGGTTCTTGTAAGCATAAC+TGG - Chr8:79664852-79664871 None:intergenic 35.0%
CAAATTACTCCATGATATGG+TGG - Chr8:79665138-79665157 None:intergenic 35.0%
CAACTTGAAACATCATGTTC+AGG - Chr8:79664245-79664264 None:intergenic 35.0%
CAGGAACAAAACAACAAAGA+TGG - Chr8:79665897-79665916 None:intergenic 35.0%
CCAAATAGCTTAGTAGAAAG+AGG + Chr8:79664408-79664427 MsG0880046899.01.T01:CDS 35.0%
CCTCTTTCTACTAAGCTATT+TGG - Chr8:79664411-79664430 None:intergenic 35.0%
CGAAGGACAAGTATCATAAT+TGG + Chr8:79663736-79663755 MsG0880046899.01.T01:CDS 35.0%
CGTATTCACTCCTAAATGAA+TGG - Chr8:79664912-79664931 None:intergenic 35.0%
CTACACCAATGTAACTTACT+AGG - Chr8:79665275-79665294 None:intergenic 35.0%
CTAGTAAGTTACATTGGTGT+AGG + Chr8:79665273-79665292 MsG0880046899.01.T01:intron 35.0%
CTATTTCAAAGCATGGGATT+TGG + Chr8:79664657-79664676 MsG0880046899.01.T01:CDS 35.0%
CTTAGTAGAAAGAGGATCAA+AGG + Chr8:79664416-79664435 MsG0880046899.01.T01:CDS 35.0%
GATAGTTTATCTGCATCATC+CGG - Chr8:79665995-79666014 None:intergenic 35.0%
GATCTGGAAATGCTTATCAT+AGG + Chr8:79663805-79663824 MsG0880046899.01.T01:CDS 35.0%
GATTGAGTGAATAGGCAAAT+TGG - Chr8:79665462-79665481 None:intergenic 35.0%
GGAAATGCTTATCATAGGAA+GGG + Chr8:79663810-79663829 MsG0880046899.01.T01:CDS 35.0%
GGTTATCTTGACTTAGACTT+TGG - Chr8:79663998-79664017 None:intergenic 35.0%
TAATTCAGTTCCAGAATCCT+GGG - Chr8:79666017-79666036 None:intergenic 35.0%
TATGGCAACAGTAGATAGAT+TGG + Chr8:79664746-79664765 MsG0880046899.01.T01:CDS 35.0%
TGCTGTAAAAATCCCAAAAG+TGG - Chr8:79664271-79664290 None:intergenic 35.0%
TGGAAATGCTTATCATAGGA+AGG + Chr8:79663809-79663828 MsG0880046899.01.T01:CDS 35.0%
TGTCACATCATAGTCTCTAT+CGG - Chr8:79665070-79665089 None:intergenic 35.0%
TTAATTCAGTTCCAGAATCC+TGG - Chr8:79666018-79666037 None:intergenic 35.0%
TTAGGAGTGAATACGCAAAT+TGG + Chr8:79664917-79664936 MsG0880046899.01.T01:intron 35.0%
TTGTCCCTAGTAAGTTACAT+TGG + Chr8:79665267-79665286 MsG0880046899.01.T01:intron 35.0%
! AATGTGATGGAAACAATCAG+GGG + Chr8:79664112-79664131 MsG0880046899.01.T01:intron 35.0%
! AGTCTCTCAATTTTGCGAAT+TGG - Chr8:79665411-79665430 None:intergenic 35.0%
! CTTGCATTTTTCACATGAAC+AGG + Chr8:79665568-79665587 MsG0880046899.01.T01:intron 35.0%
! GTAATGTGATGGAAACAATC+AGG + Chr8:79664110-79664129 MsG0880046899.01.T01:intron 35.0%
!! ATAATTTTGGGTGTCAAGCT+TGG + Chr8:79665602-79665621 MsG0880046899.01.T01:CDS 35.0%
!! CCAATGCTATTTCAAAGCAT+GGG + Chr8:79664651-79664670 MsG0880046899.01.T01:CDS 35.0%
!! TCCAATGCTATTTCAAAGCA+TGG + Chr8:79664650-79664669 MsG0880046899.01.T01:CDS 35.0%
!!! CTGTTCCTCTGATTTTTTCA+AGG - Chr8:79664458-79664477 None:intergenic 35.0%
!!! GAAAACACTGGTTTTGGAAA+AGG + Chr8:79665963-79665982 MsG0880046899.01.T01:CDS 35.0%
!!! TTCAAGTTGCAACCACTTTT+GGG + Chr8:79664256-79664275 MsG0880046899.01.T01:CDS 35.0%
!!! TTTCAAGTTGCAACCACTTT+TGG + Chr8:79664255-79664274 MsG0880046899.01.T01:CDS 35.0%
!!! TTTGGAGAAAACACTGGTTT+TGG + Chr8:79665957-79665976 MsG0880046899.01.T01:CDS 35.0%
AAGAAGATACAGACCAGAGT+TGG + Chr8:79664563-79664582 MsG0880046899.01.T01:CDS 40.0%
ACACAACAGATTCAACCATG+GGG + Chr8:79664309-79664328 MsG0880046899.01.T01:CDS 40.0%
ATTCCACCACTGATGAGTAA+GGG - Chr8:79664780-79664799 None:intergenic 40.0%
CAACGCTTTGCAAATGCAAA+TGG - Chr8:79665540-79665559 None:intergenic 40.0%
CAAGTGCAATGTGACATGTT+TGG + Chr8:79665298-79665317 MsG0880046899.01.T01:intron 40.0%
CATTAGAAATCCGATCAGCA+GGG + Chr8:79665747-79665766 MsG0880046899.01.T01:CDS 40.0%
CTGAGAGAGCTAATTTCTAC+AGG - Chr8:79665161-79665180 None:intergenic 40.0%
CTGGTCTGTATCTTCTTTCA+AGG - Chr8:79664560-79664579 None:intergenic 40.0%
GAAAGAGGATCAAAGGAACA+AGG + Chr8:79664423-79664442 MsG0880046899.01.T01:CDS 40.0%
GAACACAACAGATTCAACCA+TGG + Chr8:79664307-79664326 MsG0880046899.01.T01:CDS 40.0%
GATAAACTATCCCAGGATTC+TGG + Chr8:79666004-79666023 MsG0880046899.01.T01:CDS 40.0%
GATCGATGCTTACAATCTTG+AGG - Chr8:79664944-79664963 None:intergenic 40.0%
GTTCACTTTCATAATCGCAC+AGG + Chr8:79665799-79665818 MsG0880046899.01.T01:CDS 40.0%
GTTCCAAGATATGCTTGATG+CGG + Chr8:79664494-79664513 MsG0880046899.01.T01:CDS 40.0%
TATTCCACCACTGATGAGTA+AGG - Chr8:79664781-79664800 None:intergenic 40.0%
TGAATGAACATAGAAGGGAC+AGG - Chr8:79665829-79665848 None:intergenic 40.0%
TGATGCAGATAAACTATCCC+AGG + Chr8:79665997-79666016 MsG0880046899.01.T01:CDS 40.0%
TGGCAACAGTAGATAGATTG+GGG + Chr8:79664748-79664767 MsG0880046899.01.T01:CDS 40.0%
TTCCAAGATATGCTTGATGC+GGG + Chr8:79664495-79664514 MsG0880046899.01.T01:CDS 40.0%
! AATCGTGACTTTTCCATACC+TGG - Chr8:79664818-79664837 None:intergenic 40.0%
! ACTAAGCTATTTGGAGTCTC+TGG - Chr8:79664402-79664421 None:intergenic 40.0%
! ATCATAGGAAGGGTTTTGCA+AGG + Chr8:79663820-79663839 MsG0880046899.01.T01:CDS 40.0%
! TGGCATTGGATTTGGAAATC+AGG + Chr8:79663846-79663865 MsG0880046899.01.T01:CDS 40.0%
!! CCAACTCTTTTGATGACTGT+CGG + Chr8:79664363-79664382 MsG0880046899.01.T01:CDS 40.0%
!! CCCATGCTTTGAAATAGCAT+TGG - Chr8:79664654-79664673 None:intergenic 40.0%
!!! GTTTTGGAAAAGGATACTGC+CGG + Chr8:79665973-79665992 MsG0880046899.01.T01:CDS 40.0%
!!! TCTAGCTTTTGGATGGTCAT+GGG + Chr8:79665688-79665707 MsG0880046899.01.T01:CDS 40.0%
!!! TTCTAGCTTTTGGATGGTCA+TGG + Chr8:79665687-79665706 MsG0880046899.01.T01:CDS 40.0%
AACCAAGGGAATACCCATTG+AGG + Chr8:79665922-79665941 MsG0880046899.01.T01:CDS 45.0%
ACGTCAATGCCACCATATCA+TGG + Chr8:79665126-79665145 MsG0880046899.01.T01:intron 45.0%
AGTTTATGCCGGTCAGAATC+TGG - Chr8:79664614-79664633 None:intergenic 45.0%
ATGGGTATTCCCTTGGTTTC+AGG - Chr8:79665920-79665939 None:intergenic 45.0%
CACAACAGATTCAACCATGG+GGG + Chr8:79664310-79664329 MsG0880046899.01.T01:CDS 45.0%
CCATTAGAAATCCGATCAGC+AGG + Chr8:79665746-79665765 MsG0880046899.01.T01:CDS 45.0%
CCGACAGTCATCAAAAGAGT+TGG - Chr8:79664366-79664385 None:intergenic 45.0%
CCTGCTGATCGGATTTCTAA+TGG - Chr8:79665749-79665768 None:intergenic 45.0%
GAATGCTGCAGCTATTGATC+TGG + Chr8:79663789-79663808 MsG0880046899.01.T01:CDS 45.0%
GAGCGGAATAGCCTTCAAAA+AGG - Chr8:79664184-79664203 None:intergenic 45.0%
GCCATCTCTGACAAATAGAG+CGG - Chr8:79664201-79664220 None:intergenic 45.0%
TATGCTTGATGCGGGTGAAT+TGG + Chr8:79664503-79664522 MsG0880046899.01.T01:CDS 45.0%
TCCGCTCTATTTGTCAGAGA+TGG + Chr8:79664197-79664216 MsG0880046899.01.T01:CDS 45.0%
TGGTATTGCAGCAAGTCCAA+GGG - Chr8:79664346-79664365 None:intergenic 45.0%
TTGGTATTGCAGCAAGTCCA+AGG - Chr8:79664347-79664366 None:intergenic 45.0%
TTGTTCCTGCCTGAAACCAA+GGG + Chr8:79665908-79665927 MsG0880046899.01.T01:CDS 45.0%
TTTGTTCCTGCCTGAAACCA+AGG + Chr8:79665907-79665926 MsG0880046899.01.T01:CDS 45.0%
! ATACAGACCAGAGTTGGTCA+TGG + Chr8:79664569-79664588 MsG0880046899.01.T01:CDS 45.0%
! GGTGGTGTCAACTTTCTTGT+TGG + Chr8:79663757-79663776 MsG0880046899.01.T01:CDS 45.0%
! TAGCTTTTGGATGGTCATGG+GGG + Chr8:79665690-79665709 MsG0880046899.01.T01:CDS 45.0%
!! ACTCTTTTGATGACTGTCGG+AGG + Chr8:79664366-79664385 MsG0880046899.01.T01:CDS 45.0%
!! CAAGGTGTTGGCATTGGATT+TGG + Chr8:79663838-79663857 MsG0880046899.01.T01:CDS 45.0%
!! CTAGCTTTTGGATGGTCATG+GGG + Chr8:79665689-79665708 MsG0880046899.01.T01:CDS 45.0%
!! GGGATCTTTCTGTTTTTCGC+TGG + Chr8:79665854-79665873 MsG0880046899.01.T01:CDS 45.0%
!! TCTTTCTGTTTTTCGCTGGC+TGG + Chr8:79665858-79665877 MsG0880046899.01.T01:CDS 45.0%
!! TGATATGGTGGCATTGACGT+AGG - Chr8:79665126-79665145 None:intergenic 45.0%
!!! GTTTTGCAAGGTGTTGGCAT+TGG + Chr8:79663832-79663851 MsG0880046899.01.T01:CDS 45.0%
AACAGATTCAACCATGGGGG+TGG + Chr8:79664313-79664332 MsG0880046899.01.T01:CDS 50.0%
AACTACTCCAGTCAAGGCTG+AGG - Chr8:79664703-79664722 None:intergenic 50.0%
ACGTAGGATCAACGTGGAGA+AGG - Chr8:79665110-79665129 None:intergenic 50.0%
CACCCGCATCAAGCATATCT+TGG - Chr8:79664500-79664519 None:intergenic 50.0%
CAGATAGCCATGACCAACTC+TGG - Chr8:79664579-79664598 None:intergenic 50.0%
CAGTAGATAGATTGGGGCGA+CGG + Chr8:79664754-79664773 MsG0880046899.01.T01:CDS 50.0%
CCTGCATTCCAGATTCTGAC+CGG + Chr8:79664603-79664622 MsG0880046899.01.T01:CDS 50.0%
CGTAATTGGAGCTGCGACTA+TGG - Chr8:79663704-79663723 None:intergenic 50.0%
CGTCCATACCTCCTCGTAAT+TGG - Chr8:79663718-79663737 None:intergenic 50.0%
CTCCTCAATGGGTATTCCCT+TGG - Chr8:79665927-79665946 None:intergenic 50.0%
CTTTACTCCTCAGCCTTGAC+TGG + Chr8:79664693-79664712 MsG0880046899.01.T01:CDS 50.0%
GAGGATCAAAGGAACAAGGG+AGG + Chr8:79664427-79664446 MsG0880046899.01.T01:CDS 50.0%
GCTCCAATTACGAGGAGGTA+TGG + Chr8:79663712-79663731 MsG0880046899.01.T01:CDS 50.0%
GGCAAGAACTACTCCAGTCA+AGG - Chr8:79664709-79664728 None:intergenic 50.0%
GTATTCCCTTGGTTTCAGGC+AGG - Chr8:79665916-79665935 None:intergenic 50.0%
TAGTCGCAGCTCCAATTACG+AGG + Chr8:79663704-79663723 MsG0880046899.01.T01:CDS 50.0%
TGATACTCTGCCCTGCTGAT+CGG - Chr8:79665760-79665779 None:intergenic 50.0%
! GCATTGACGTAGGATCAACG+TGG - Chr8:79665116-79665135 None:intergenic 50.0%
! GGAAGGGTTTTGCAAGGTGT+TGG + Chr8:79663826-79663845 MsG0880046899.01.T01:CDS 50.0%
! TTACGAGGAGGTATGGACGA+AGG + Chr8:79663719-79663738 MsG0880046899.01.T01:CDS 50.0%
CTTGGGACTGTCCATCCAAG+TGG - Chr8:79665716-79665735 None:intergenic 55.0%
GTTCAGGGCTCCTCGAAAGT+GGG - Chr8:79664229-79664248 None:intergenic 55.0%
TCAACCATGGGGGTGGAGAT+TGG + Chr8:79664320-79664339 MsG0880046899.01.T01:CDS 55.0%
TCGCAGCTCCAATTACGAGG+AGG + Chr8:79663707-79663726 MsG0880046899.01.T01:CDS 55.0%
TGTTCAGGGCTCCTCGAAAG+TGG - Chr8:79664230-79664249 None:intergenic 55.0%
! CCGGTCAGAATCTGGAATGC+AGG - Chr8:79664606-79664625 None:intergenic 55.0%
AGGGCTCCTCGAAAGTGGGT+TGG - Chr8:79664225-79664244 None:intergenic 60.0%
ATGGCGCCAACCCACTTTCG+AGG + Chr8:79664216-79664235 MsG0880046899.01.T01:CDS 60.0%
CGACGGCCCTTACTCATCAG+TGG + Chr8:79664771-79664790 MsG0880046899.01.T01:CDS 60.0%
CGGCCCTTACTCATCAGTGG+TGG + Chr8:79664774-79664793 MsG0880046899.01.T01:CDS 60.0%
AGGGCCAATCTCCACCCCCA+TGG - Chr8:79664327-79664346 None:intergenic 65.0%
GGATGGTCATGGGGGCCACT+TGG + Chr8:79665698-79665717 MsG0880046899.01.T01:CDS 65.0%
GGTCATGGGGGCCACTTGGA+TGG + Chr8:79665702-79665721 MsG0880046899.01.T01:CDS 65.0%
! TGGGGGTGGAGATTGGCCCT+TGG + Chr8:79664327-79664346 MsG0880046899.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79663562 79666069 79663562 ID=MsG0880046899.01;Name=MsG0880046899.01
Chr8 mRNA 79663562 79666069 79663562 ID=MsG0880046899.01.T01;Parent=MsG0880046899.01;Name=MsG0880046899.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|0.5|0.33|3|0|481
Chr8 exon 79663562 79663867 79663562 ID=MsG0880046899.01.T01:exon:34408;Parent=MsG0880046899.01.T01
Chr8 exon 79664159 79664818 79664159 ID=MsG0880046899.01.T01:exon:34409;Parent=MsG0880046899.01.T01
Chr8 exon 79665590 79666069 79665590 ID=MsG0880046899.01.T01:exon:34410;Parent=MsG0880046899.01.T01
Chr8 CDS 79663562 79663867 79663562 ID=MsG0880046899.01.T01:cds;Parent=MsG0880046899.01.T01
Chr8 CDS 79664159 79664818 79664159 ID=MsG0880046899.01.T01:cds;Parent=MsG0880046899.01.T01
Chr8 CDS 79665590 79666069 79665590 ID=MsG0880046899.01.T01:cds;Parent=MsG0880046899.01.T01
Gene Sequence

>MsG0880046899.01.T01

ATGGATGACTTTCTTCAGAATTTCTTCCCTGCAGTGTACAAACATAAATTGCGAGCACATGAAAACAACTATTGCAAGTATAACAATCAGGGGATTTCTGCATTTACCTCCACTTTATACATTTCTGGTTTCATTGCATCCATAGTCGCAGCTCCAATTACGAGGAGGTATGGACGAAGGACAAGTATCATAATTGGTGGTGTCAACTTTCTTGTTGGATCAGCTCTGAATGCTGCAGCTATTGATCTGGAAATGCTTATCATAGGAAGGGTTTTGCAAGGTGTTGGCATTGGATTTGGAAATCAGAAGATAATTCAATTATACTATACCTTTTTGAAGGCTATTCCGCTCTATTTGTCAGAGATGGCGCCAACCCACTTTCGAGGAGCCCTGAACATGATGTTTCAAGTTGCAACCACTTTTGGGATTTTTACAGCAAATATGATCAATTACGGAACACAACAGATTCAACCATGGGGGTGGAGATTGGCCCTTGGACTTGCTGCAATACCAACTCTTTTGATGACTGTCGGAGGAATATTTATTCCAGAGACTCCAAATAGCTTAGTAGAAAGAGGATCAAAGGAACAAGGGAGGAAGCTCCTTGAAAAAATCAGAGGAACAGATGAGGTCGACGCAGAGTTCCAAGATATGCTTGATGCGGGTGAATTGGCAAACTCAATAAAGCACCCTTATTATAACATCCTTGAAAGAAGATACAGACCAGAGTTGGTCATGGCTATCTGCATGCCTGCATTCCAGATTCTGACCGGCATAAACTCAATTCTCTTTTATGCTCCAATGCTATTTCAAAGCATGGGATTTGGCAGACAAGCATCGCTTTACTCCTCAGCCTTGACTGGAGTAGTTCTTGCCTTATCAACATTTATTTCTATGGCAACAGTAGATAGATTGGGGCGACGGCCCTTACTCATCAGTGGTGGAATACAAATGATTATATGCCAGGTTATAGTTGCCATAATTTTGGGTGTCAAGCTTGGACCAAACCAAGAATTGTCAAAAAACTATTCAATATCGGTTGTAGTTGTACTTTCTCTATTTGTTCTAGCTTTTGGATGGTCATGGGGGCCACTTGGATGGACAGTCCCAAGTGAGATATTTCCATTAGAAATCCGATCAGCAGGGCAGAGTATCACAGTTGCAGTAAATCTTCTGTTCACTTTCATAATCGCACAGGTTTTCCTGTCCCTTCTATGTTCATTCAAGTATGGGATCTTTCTGTTTTTCGCTGGCTGGATAGCCGTCATGACCATCTTTGTTGTTTTGTTCCTGCCTGAAACCAAGGGAATACCCATTGAGGAGATGTCATTTATTTGGAGAAAACACTGGTTTTGGAAAAGGATACTGCCGGATGATGCAGATAAACTATCCCAGGATTCTGGAACTGAATTAATTAACTTAGATGCACATGAACATGGAATATAG
Protein sequence

>MsG0880046899.01.T01

MDDFLQNFFPAVYKHKLRAHENNYCKYNNQGISAFTSTLYISGFIASIVAAPITRRYGRRTSIIIGGVNFLVGSALNAAAIDLEMLIIGRVLQGVGIGFGNQKIIQLYYTFLKAIPLYLSEMAPTHFRGALNMMFQVATTFGIFTANMINYGTQQIQPWGWRLALGLAAIPTLLMTVGGIFIPETPNSLVERGSKEQGRKLLEKIRGTDEVDAEFQDMLDAGELANSIKHPYYNILERRYRPELVMAICMPAFQILTGINSILFYAPMLFQSMGFGRQASLYSSALTGVVLALSTFISMATVDRLGRRPLLISGGIQMIICQVIVAIILGVKLGPNQELSKNYSISVVVVLSLFVLAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIIAQVFLSLLCSFKYGIFLFFAGWIAVMTIFVVLFLPETKGIPIEEMSFIWRKHWFWKRILPDDADKLSQDSGTELINLDAHEHGI*