Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047067.01.T01 | XP_013458268.1 | 89.007 | 282 | 17 | 3 | 4 | 281 | 1 | 272 | 4.65E-162 | 461 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047067.01.T01 | Q8L9T5 | 48.208 | 307 | 122 | 13 | 4 | 278 | 1 | 302 | 3.85E-65 | 209 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047067.01.T01 | A0A072UR51 | 89.007 | 282 | 17 | 3 | 4 | 281 | 1 | 272 | 2.22e-162 | 461 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0380011707.01 | MsG0880047067.01 | PPI |
MsG0380011707.01 | MsG0880047067.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047067.01.T01 | MTR_4g120270 | 89.007 | 282 | 17 | 3 | 4 | 281 | 1 | 272 | 5.63e-166 | 461 |
MsG0880047067.01.T01 | MTR_2g436100 | 53.150 | 254 | 94 | 10 | 18 | 263 | 27 | 263 | 5.31e-72 | 223 |
MsG0880047067.01.T01 | MTR_8g023400 | 40.201 | 199 | 95 | 6 | 16 | 208 | 21 | 201 | 5.52e-36 | 131 |
MsG0880047067.01.T01 | MTR_7g117540 | 45.455 | 143 | 64 | 3 | 20 | 161 | 20 | 149 | 4.15e-31 | 117 |
MsG0880047067.01.T01 | MTR_3g464780 | 53.012 | 83 | 33 | 1 | 82 | 158 | 95 | 177 | 4.93e-27 | 106 |
MsG0880047067.01.T01 | MTR_6g087150 | 45.385 | 130 | 59 | 4 | 34 | 158 | 42 | 164 | 1.24e-25 | 104 |
MsG0880047067.01.T01 | MTR_3g110190 | 40.580 | 138 | 68 | 3 | 34 | 164 | 13 | 143 | 3.05e-25 | 103 |
MsG0880047067.01.T01 | MTR_2g090950 | 38.636 | 176 | 87 | 4 | 20 | 186 | 30 | 193 | 6.25e-25 | 100 |
MsG0880047067.01.T01 | MTR_7g108855 | 43.182 | 132 | 62 | 3 | 90 | 217 | 67 | 189 | 2.07e-24 | 97.4 |
MsG0880047067.01.T01 | MTR_8g089880 | 41.401 | 157 | 71 | 6 | 89 | 237 | 127 | 270 | 4.67e-24 | 98.6 |
MsG0880047067.01.T01 | MTR_1g082550 | 46.939 | 98 | 46 | 3 | 86 | 178 | 95 | 191 | 1.44e-23 | 99.0 |
MsG0880047067.01.T01 | MTR_5g064990 | 38.415 | 164 | 77 | 7 | 23 | 179 | 62 | 208 | 1.48e-23 | 99.0 |
MsG0880047067.01.T01 | MTR_7g113800 | 53.012 | 83 | 34 | 1 | 85 | 162 | 87 | 169 | 1.61e-23 | 98.6 |
MsG0880047067.01.T01 | MTR_3g100400 | 56.164 | 73 | 30 | 1 | 89 | 159 | 130 | 202 | 2.36e-23 | 99.0 |
MsG0880047067.01.T01 | MTR_5g071930 | 38.411 | 151 | 85 | 3 | 24 | 173 | 7 | 150 | 3.09e-23 | 94.4 |
MsG0880047067.01.T01 | MTR_4g063070 | 39.869 | 153 | 70 | 6 | 21 | 158 | 236 | 381 | 5.84e-23 | 97.4 |
MsG0880047067.01.T01 | MTR_5g066250 | 37.692 | 130 | 74 | 3 | 69 | 195 | 114 | 239 | 6.49e-23 | 97.8 |
MsG0880047067.01.T01 | MTR_4g093830 | 32.278 | 158 | 97 | 3 | 25 | 174 | 58 | 213 | 8.75e-23 | 96.7 |
MsG0880047067.01.T01 | MTR_3g091620 | 38.583 | 127 | 63 | 3 | 80 | 191 | 92 | 218 | 1.09e-22 | 96.3 |
MsG0880047067.01.T01 | MTR_2g090905 | 47.778 | 90 | 39 | 1 | 78 | 159 | 28 | 117 | 1.14e-22 | 90.9 |
MsG0880047067.01.T01 | MTR_2g096350 | 46.591 | 88 | 43 | 1 | 90 | 173 | 108 | 195 | 1.25e-22 | 93.6 |
MsG0880047067.01.T01 | MTR_5g064980 | 41.071 | 112 | 53 | 2 | 87 | 193 | 106 | 209 | 8.80e-22 | 94.4 |
MsG0880047067.01.T01 | MTR_8g073120 | 44.545 | 110 | 51 | 4 | 59 | 164 | 46 | 149 | 8.88e-22 | 90.9 |
MsG0880047067.01.T01 | MTR_1g043410 | 35.526 | 152 | 86 | 4 | 14 | 158 | 22 | 168 | 2.84e-21 | 91.7 |
MsG0880047067.01.T01 | MTR_3g071300 | 30.409 | 171 | 94 | 6 | 1 | 162 | 1 | 155 | 2.94e-21 | 88.6 |
MsG0880047067.01.T01 | MTR_3g099650 | 35.811 | 148 | 77 | 3 | 30 | 172 | 61 | 195 | 5.80e-21 | 91.7 |
MsG0880047067.01.T01 | MTR_5g030010 | 31.746 | 189 | 101 | 6 | 31 | 193 | 58 | 244 | 1.31e-20 | 90.5 |
MsG0880047067.01.T01 | MTR_2g009310 | 38.372 | 172 | 72 | 8 | 89 | 228 | 135 | 304 | 1.32e-20 | 90.9 |
MsG0880047067.01.T01 | MTR_5g064890 | 32.057 | 209 | 118 | 9 | 33 | 225 | 59 | 259 | 1.87e-20 | 90.1 |
MsG0880047067.01.T01 | MTR_1g492830 | 34.483 | 145 | 76 | 4 | 20 | 158 | 2 | 133 | 2.12e-20 | 87.4 |
MsG0880047067.01.T01 | MTR_8g066780 | 32.000 | 150 | 96 | 3 | 31 | 176 | 58 | 205 | 2.57e-20 | 89.7 |
MsG0880047067.01.T01 | MTR_1g070140 | 46.753 | 77 | 38 | 1 | 87 | 160 | 101 | 177 | 2.60e-20 | 89.4 |
MsG0880047067.01.T01 | MTR_3g094000 | 43.820 | 89 | 46 | 1 | 86 | 170 | 88 | 176 | 3.66e-20 | 85.9 |
MsG0880047067.01.T01 | MTR_1g074190 | 36.957 | 138 | 64 | 5 | 29 | 158 | 54 | 176 | 4.84e-20 | 89.0 |
MsG0880047067.01.T01 | MTR_6g007737 | 35.374 | 147 | 73 | 5 | 25 | 160 | 71 | 206 | 6.18e-20 | 89.0 |
MsG0880047067.01.T01 | MTR_7g073200 | 38.710 | 124 | 64 | 3 | 35 | 155 | 35 | 149 | 7.97e-20 | 84.7 |
MsG0880047067.01.T01 | MTR_5g024730 | 34.759 | 187 | 91 | 7 | 29 | 203 | 34 | 201 | 9.80e-20 | 85.5 |
MsG0880047067.01.T01 | MTR_5g082940 | 44.706 | 85 | 43 | 1 | 76 | 156 | 62 | 146 | 1.22e-19 | 84.3 |
MsG0880047067.01.T01 | MTR_8g071815 | 37.681 | 138 | 67 | 4 | 33 | 163 | 15 | 140 | 1.37e-19 | 84.3 |
MsG0880047067.01.T01 | MTR_4g106680 | 33.557 | 149 | 76 | 5 | 25 | 161 | 43 | 180 | 2.24e-19 | 86.3 |
MsG0880047067.01.T01 | MTR_7g116220 | 47.368 | 76 | 35 | 2 | 86 | 156 | 67 | 142 | 3.83e-19 | 83.2 |
MsG0880047067.01.T01 | MTR_4g129420 | 43.396 | 106 | 49 | 2 | 89 | 191 | 117 | 214 | 3.87e-19 | 87.4 |
MsG0880047067.01.T01 | MTR_5g026730 | 41.584 | 101 | 50 | 3 | 76 | 169 | 52 | 150 | 4.52e-19 | 82.8 |
MsG0880047067.01.T01 | MTR_8g066740 | 41.379 | 87 | 45 | 1 | 88 | 168 | 75 | 161 | 1.74e-18 | 84.0 |
MsG0880047067.01.T01 | MTR_8g063660 | 35.971 | 139 | 82 | 3 | 24 | 158 | 4 | 139 | 2.33e-18 | 84.0 |
MsG0880047067.01.T01 | MTR_5g076990 | 42.045 | 88 | 45 | 1 | 87 | 168 | 74 | 161 | 2.60e-18 | 83.6 |
MsG0880047067.01.T01 | MTR_6g055030 | 43.023 | 86 | 44 | 2 | 85 | 165 | 93 | 178 | 2.92e-18 | 83.6 |
MsG0880047067.01.T01 | MTR_5g034790 | 35.766 | 137 | 81 | 3 | 25 | 155 | 49 | 184 | 4.61e-18 | 83.6 |
MsG0880047067.01.T01 | MTR_8g092960 | 44.444 | 72 | 37 | 1 | 87 | 155 | 101 | 172 | 6.80e-18 | 80.5 |
MsG0880047067.01.T01 | MTR_8g092840 | 44.444 | 72 | 37 | 1 | 87 | 155 | 111 | 182 | 7.01e-18 | 80.9 |
MsG0880047067.01.T01 | MTR_5g026720 | 36.792 | 106 | 59 | 3 | 75 | 172 | 48 | 153 | 7.37e-18 | 79.0 |
MsG0880047067.01.T01 | MTR_7g116180 | 47.297 | 74 | 34 | 2 | 88 | 156 | 66 | 139 | 1.10e-17 | 79.3 |
MsG0880047067.01.T01 | MTR_3g086730 | 32.370 | 173 | 83 | 5 | 29 | 182 | 1 | 158 | 1.14e-17 | 80.5 |
MsG0880047067.01.T01 | MTR_7g076250 | 33.696 | 92 | 58 | 1 | 89 | 177 | 63 | 154 | 1.18e-17 | 79.3 |
MsG0880047067.01.T01 | MTR_3g116000 | 35.385 | 130 | 68 | 3 | 29 | 155 | 30 | 146 | 1.21e-17 | 79.3 |
MsG0880047067.01.T01 | MTR_1g070425 | 47.297 | 74 | 34 | 2 | 88 | 156 | 67 | 140 | 1.41e-17 | 79.0 |
MsG0880047067.01.T01 | MTR_8g092985 | 43.243 | 74 | 39 | 1 | 85 | 155 | 107 | 180 | 1.60e-17 | 79.3 |
MsG0880047067.01.T01 | MTR_8g093010 | 30.612 | 147 | 72 | 3 | 12 | 155 | 57 | 176 | 1.74e-17 | 79.7 |
MsG0880047067.01.T01 | MTR_7g096690 | 31.469 | 143 | 77 | 5 | 24 | 160 | 20 | 147 | 2.55e-17 | 80.9 |
MsG0880047067.01.T01 | MTR_3g086700 | 33.775 | 151 | 74 | 4 | 29 | 168 | 1 | 136 | 2.77e-17 | 78.2 |
MsG0880047067.01.T01 | MTR_8g009190 | 35.971 | 139 | 73 | 2 | 25 | 158 | 23 | 150 | 2.98e-17 | 80.5 |
MsG0880047067.01.T01 | MTR_3g078120 | 29.787 | 141 | 81 | 3 | 25 | 160 | 5 | 132 | 7.64e-17 | 76.3 |
MsG0880047067.01.T01 | MTR_8g092930 | 43.662 | 71 | 37 | 1 | 88 | 155 | 111 | 181 | 8.31e-17 | 77.8 |
MsG0880047067.01.T01 | MTR_2g055790 | 45.070 | 71 | 38 | 1 | 88 | 158 | 76 | 145 | 9.58e-17 | 77.0 |
MsG0880047067.01.T01 | MTR_7g116200 | 47.143 | 70 | 36 | 1 | 88 | 156 | 67 | 136 | 1.65e-16 | 75.9 |
MsG0880047067.01.T01 | MTR_5g022920 | 45.205 | 73 | 36 | 1 | 87 | 155 | 159 | 231 | 1.80e-16 | 77.0 |
MsG0880047067.01.T01 | MTR_3g095560 | 63.636 | 44 | 16 | 0 | 112 | 155 | 135 | 178 | 5.28e-16 | 75.9 |
MsG0880047067.01.T01 | MTR_2g044570 | 52.174 | 69 | 28 | 2 | 98 | 161 | 63 | 131 | 8.04e-16 | 76.3 |
MsG0880047067.01.T01 | MTR_7g079280 | 36.782 | 87 | 51 | 1 | 89 | 171 | 80 | 166 | 8.17e-16 | 73.9 |
MsG0880047067.01.T01 | MTR_2g041200 | 56.897 | 58 | 23 | 1 | 112 | 169 | 108 | 163 | 9.05e-16 | 73.9 |
MsG0880047067.01.T01 | MTR_8g028465 | 36.047 | 86 | 55 | 0 | 86 | 171 | 87 | 172 | 9.15e-16 | 74.3 |
MsG0880047067.01.T01 | MTR_4g056590 | 40.845 | 71 | 41 | 1 | 85 | 155 | 96 | 165 | 1.75e-15 | 73.6 |
MsG0880047067.01.T01 | MTR_8g092970 | 61.364 | 44 | 17 | 0 | 112 | 155 | 130 | 173 | 1.77e-15 | 73.9 |
MsG0880047067.01.T01 | MTR_8g092990 | 61.364 | 44 | 17 | 0 | 112 | 155 | 140 | 183 | 1.97e-15 | 73.9 |
MsG0880047067.01.T01 | MTR_1g100737 | 38.158 | 76 | 40 | 1 | 88 | 156 | 91 | 166 | 2.32e-15 | 73.2 |
MsG0880047067.01.T01 | MTR_7g116210 | 45.714 | 70 | 37 | 1 | 88 | 156 | 9 | 78 | 2.52e-15 | 70.9 |
MsG0880047067.01.T01 | MTR_2g035800 | 40.541 | 74 | 42 | 1 | 89 | 160 | 76 | 149 | 4.52e-15 | 71.6 |
MsG0880047067.01.T01 | MTR_3g078470 | 40.541 | 74 | 40 | 1 | 87 | 156 | 74 | 147 | 1.06e-14 | 72.0 |
MsG0880047067.01.T01 | MTR_3g087900 | 50.820 | 61 | 28 | 2 | 99 | 158 | 55 | 114 | 1.26e-14 | 70.1 |
MsG0880047067.01.T01 | MTR_3g078450 | 45.833 | 72 | 35 | 2 | 89 | 156 | 76 | 147 | 1.46e-14 | 71.6 |
MsG0880047067.01.T01 | MTR_8g074900 | 43.056 | 72 | 39 | 1 | 84 | 155 | 153 | 222 | 1.83e-14 | 71.2 |
MsG0880047067.01.T01 | MTR_4g094725 | 41.892 | 74 | 39 | 1 | 86 | 155 | 75 | 148 | 2.94e-14 | 69.3 |
MsG0880047067.01.T01 | MTR_7g059360 | 41.379 | 87 | 40 | 1 | 112 | 198 | 157 | 232 | 2.99e-14 | 70.9 |
MsG0880047067.01.T01 | MTR_5g092790 | 35.922 | 103 | 53 | 4 | 68 | 158 | 129 | 230 | 3.32e-14 | 70.9 |
MsG0880047067.01.T01 | MTR_8g032690 | 35.526 | 76 | 48 | 1 | 100 | 174 | 5 | 80 | 3.99e-14 | 67.4 |
MsG0880047067.01.T01 | MTR_3g114500 | 52.083 | 48 | 23 | 0 | 112 | 159 | 70 | 117 | 7.45e-14 | 67.4 |
MsG0880047067.01.T01 | MTR_1g090480 | 35.556 | 90 | 52 | 2 | 89 | 172 | 72 | 161 | 1.42e-13 | 67.8 |
MsG0880047067.01.T01 | MTR_8g027980 | 40.385 | 104 | 46 | 4 | 94 | 182 | 95 | 197 | 1.67e-13 | 69.3 |
MsG0880047067.01.T01 | MTR_5g009210 | 45.205 | 73 | 32 | 2 | 89 | 155 | 287 | 357 | 2.08e-13 | 69.7 |
MsG0880047067.01.T01 | MTR_5g092750 | 41.333 | 75 | 40 | 2 | 88 | 158 | 156 | 230 | 2.82e-13 | 68.2 |
MsG0880047067.01.T01 | MTR_4g030070 | 35.556 | 90 | 49 | 2 | 89 | 169 | 85 | 174 | 3.07e-13 | 67.8 |
MsG0880047067.01.T01 | MTR_5g009200 | 43.662 | 71 | 36 | 2 | 89 | 155 | 322 | 392 | 3.15e-13 | 69.7 |
MsG0880047067.01.T01 | MTR_6g055030 | 49.206 | 63 | 31 | 1 | 104 | 165 | 85 | 147 | 4.55e-13 | 68.2 |
MsG0880047067.01.T01 | MTR_5g009190 | 43.662 | 71 | 36 | 2 | 89 | 155 | 266 | 336 | 5.20e-13 | 68.6 |
MsG0880047067.01.T01 | MTR_7g079290 | 34.091 | 88 | 47 | 2 | 79 | 155 | 110 | 197 | 6.47e-13 | 66.6 |
MsG0880047067.01.T01 | MTR_3g078520 | 37.179 | 78 | 46 | 1 | 82 | 156 | 69 | 146 | 8.69e-13 | 65.5 |
MsG0880047067.01.T01 | MTR_4g108830 | 39.241 | 79 | 43 | 2 | 83 | 158 | 143 | 219 | 9.51e-13 | 66.2 |
MsG0880047067.01.T01 | MTR_6g007680 | 36.986 | 73 | 44 | 1 | 88 | 158 | 39 | 111 | 9.70e-13 | 65.1 |
MsG0880047067.01.T01 | MTR_4g108830 | 39.241 | 79 | 43 | 2 | 83 | 158 | 115 | 191 | 1.14e-12 | 65.5 |
MsG0880047067.01.T01 | MTR_1g026070 | 31.183 | 93 | 59 | 2 | 71 | 159 | 26 | 117 | 1.24e-12 | 64.3 |
MsG0880047067.01.T01 | MTR_4g022410 | 55.102 | 49 | 22 | 0 | 112 | 160 | 112 | 160 | 2.08e-12 | 64.7 |
MsG0880047067.01.T01 | MTR_1g056350 | 35.632 | 87 | 51 | 2 | 89 | 170 | 74 | 160 | 2.09e-12 | 64.3 |
MsG0880047067.01.T01 | MTR_8g099495 | 38.356 | 73 | 37 | 2 | 89 | 155 | 319 | 389 | 2.70e-12 | 66.6 |
MsG0880047067.01.T01 | MTR_3g081030 | 62.791 | 43 | 16 | 0 | 113 | 155 | 119 | 161 | 2.73e-12 | 65.1 |
MsG0880047067.01.T01 | MTR_8g098770 | 43.836 | 73 | 40 | 1 | 98 | 169 | 71 | 143 | 3.45e-12 | 63.5 |
MsG0880047067.01.T01 | MTR_3g012550 | 30.496 | 141 | 85 | 5 | 31 | 163 | 23 | 158 | 5.52e-12 | 63.5 |
MsG0880047067.01.T01 | MTR_4g129335 | 42.857 | 70 | 38 | 1 | 95 | 162 | 82 | 151 | 7.65e-12 | 63.2 |
MsG0880047067.01.T01 | MTR_4g129370 | 42.857 | 70 | 38 | 1 | 95 | 162 | 82 | 151 | 7.65e-12 | 63.2 |
MsG0880047067.01.T01 | MTR_6g007670 | 34.568 | 81 | 48 | 2 | 95 | 174 | 14 | 90 | 8.64e-12 | 64.3 |
MsG0880047067.01.T01 | MTR_1g090460 | 41.667 | 72 | 37 | 2 | 102 | 172 | 83 | 150 | 1.18e-11 | 62.0 |
MsG0880047067.01.T01 | MTR_2g079320 | 54.545 | 44 | 20 | 0 | 112 | 155 | 158 | 201 | 1.26e-11 | 62.8 |
MsG0880047067.01.T01 | MTR_8g099515 | 37.500 | 80 | 36 | 2 | 85 | 155 | 305 | 379 | 1.60e-11 | 64.3 |
MsG0880047067.01.T01 | MTR_8g019710 | 47.917 | 48 | 25 | 0 | 112 | 159 | 53 | 100 | 2.61e-11 | 60.5 |
MsG0880047067.01.T01 | MTR_5g066700 | 50.877 | 57 | 24 | 3 | 101 | 155 | 47 | 101 | 2.97e-11 | 60.5 |
MsG0880047067.01.T01 | MTR_5g066690 | 50.877 | 57 | 24 | 3 | 101 | 155 | 47 | 101 | 4.70e-11 | 60.1 |
MsG0880047067.01.T01 | MTR_8g027745 | 41.379 | 58 | 34 | 0 | 113 | 170 | 314 | 371 | 5.41e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047067.01.T01 | AT3G16720 | 48.208 | 307 | 122 | 13 | 4 | 278 | 1 | 302 | 3.93e-66 | 209 |
MsG0880047067.01.T01 | AT3G62690 | 45.890 | 146 | 71 | 3 | 18 | 161 | 22 | 161 | 1.75e-35 | 128 |
MsG0880047067.01.T01 | AT4G15975 | 45.333 | 150 | 63 | 6 | 42 | 188 | 18 | 151 | 9.46e-35 | 125 |
MsG0880047067.01.T01 | AT2G47560 | 34.959 | 246 | 114 | 7 | 16 | 254 | 20 | 226 | 4.90e-34 | 124 |
MsG0880047067.01.T01 | AT1G72310 | 39.535 | 172 | 75 | 6 | 20 | 170 | 20 | 183 | 1.13e-29 | 114 |
MsG0880047067.01.T01 | AT2G42360 | 31.923 | 260 | 118 | 8 | 3 | 257 | 10 | 215 | 2.95e-29 | 111 |
MsG0880047067.01.T01 | AT1G53820 | 41.060 | 151 | 68 | 4 | 22 | 158 | 22 | 165 | 3.74e-28 | 110 |
MsG0880047067.01.T01 | AT5G43420 | 36.538 | 156 | 71 | 4 | 19 | 158 | 40 | 183 | 1.70e-24 | 101 |
MsG0880047067.01.T01 | AT4G40070 | 46.078 | 102 | 39 | 2 | 89 | 174 | 95 | 196 | 3.51e-24 | 99.8 |
MsG0880047067.01.T01 | AT1G72200 | 34.653 | 202 | 109 | 7 | 35 | 227 | 66 | 253 | 4.06e-24 | 100 |
MsG0880047067.01.T01 | AT5G58580 | 43.810 | 105 | 56 | 1 | 77 | 178 | 99 | 203 | 1.93e-23 | 97.4 |
MsG0880047067.01.T01 | AT1G23980 | 36.735 | 147 | 68 | 3 | 24 | 156 | 52 | 187 | 2.66e-23 | 98.2 |
MsG0880047067.01.T01 | AT2G35420 | 36.486 | 148 | 79 | 5 | 24 | 169 | 25 | 159 | 7.62e-23 | 94.7 |
MsG0880047067.01.T01 | AT2G20030 | 58.333 | 72 | 28 | 1 | 89 | 158 | 98 | 169 | 9.03e-23 | 97.1 |
MsG0880047067.01.T01 | AT1G04360 | 40.411 | 146 | 61 | 6 | 30 | 158 | 43 | 179 | 1.22e-22 | 96.7 |
MsG0880047067.01.T01 | AT2G34990 | 35.616 | 146 | 71 | 4 | 25 | 162 | 15 | 145 | 1.40e-22 | 95.1 |
MsG0880047067.01.T01 | AT2G34990 | 35.616 | 146 | 71 | 4 | 25 | 162 | 37 | 167 | 1.44e-22 | 95.5 |
MsG0880047067.01.T01 | AT1G72220 | 32.093 | 215 | 121 | 7 | 26 | 223 | 83 | 289 | 1.61e-22 | 96.7 |
MsG0880047067.01.T01 | AT5G17600 | 50.000 | 90 | 41 | 2 | 89 | 174 | 116 | 205 | 1.98e-22 | 95.5 |
MsG0880047067.01.T01 | AT4G17905 | 29.167 | 216 | 135 | 6 | 25 | 226 | 61 | 272 | 2.12e-22 | 94.7 |
MsG0880047067.01.T01 | AT3G05200 | 48.039 | 102 | 46 | 3 | 85 | 181 | 95 | 194 | 2.59e-22 | 95.9 |
MsG0880047067.01.T01 | AT4G33565 | 59.211 | 76 | 27 | 2 | 89 | 161 | 191 | 265 | 3.00e-22 | 95.1 |
MsG0880047067.01.T01 | AT4G17905 | 29.167 | 216 | 135 | 6 | 25 | 226 | 87 | 298 | 4.43e-22 | 94.4 |
MsG0880047067.01.T01 | AT5G05810 | 56.164 | 73 | 30 | 1 | 89 | 159 | 120 | 192 | 4.94e-22 | 95.1 |
MsG0880047067.01.T01 | AT2G27940 | 35.417 | 144 | 82 | 4 | 19 | 156 | 45 | 183 | 5.96e-22 | 92.0 |
MsG0880047067.01.T01 | AT3G48030 | 35.099 | 151 | 92 | 2 | 25 | 172 | 41 | 188 | 1.36e-21 | 92.0 |
MsG0880047067.01.T01 | AT4G28890 | 55.556 | 72 | 30 | 1 | 89 | 158 | 97 | 168 | 1.58e-21 | 94.0 |
MsG0880047067.01.T01 | AT5G27420 | 36.478 | 159 | 63 | 6 | 86 | 234 | 92 | 222 | 2.25e-21 | 92.8 |
MsG0880047067.01.T01 | AT2G35000 | 38.571 | 140 | 66 | 4 | 25 | 156 | 51 | 178 | 2.27e-21 | 92.8 |
MsG0880047067.01.T01 | AT3G48030 | 35.065 | 154 | 88 | 3 | 25 | 172 | 119 | 266 | 4.12e-21 | 92.0 |
MsG0880047067.01.T01 | AT1G22500 | 49.425 | 87 | 39 | 2 | 89 | 170 | 89 | 175 | 4.33e-21 | 92.0 |
MsG0880047067.01.T01 | AT3G03550 | 36.552 | 145 | 78 | 3 | 25 | 156 | 59 | 202 | 4.62e-21 | 91.7 |
MsG0880047067.01.T01 | AT3G14320 | 48.750 | 80 | 40 | 1 | 80 | 158 | 54 | 133 | 7.14e-21 | 88.6 |
MsG0880047067.01.T01 | AT4G09120 | 47.000 | 100 | 45 | 3 | 71 | 162 | 73 | 172 | 1.07e-20 | 90.5 |
MsG0880047067.01.T01 | AT3G10910 | 35.714 | 140 | 85 | 2 | 35 | 169 | 34 | 173 | 1.84e-20 | 86.7 |
MsG0880047067.01.T01 | AT1G32361 | 34.884 | 129 | 66 | 3 | 54 | 170 | 101 | 223 | 1.85e-20 | 89.7 |
MsG0880047067.01.T01 | AT1G35330 | 49.425 | 87 | 39 | 2 | 81 | 162 | 92 | 178 | 2.01e-20 | 89.7 |
MsG0880047067.01.T01 | AT3G18773 | 34.899 | 149 | 80 | 5 | 10 | 155 | 38 | 172 | 2.81e-20 | 87.0 |
MsG0880047067.01.T01 | AT5G05280 | 34.266 | 143 | 78 | 4 | 14 | 155 | 28 | 155 | 3.04e-20 | 85.9 |
MsG0880047067.01.T01 | AT5G01880 | 49.383 | 81 | 39 | 1 | 77 | 155 | 67 | 147 | 3.30e-20 | 85.5 |
MsG0880047067.01.T01 | AT5G42200 | 33.562 | 146 | 75 | 6 | 21 | 162 | 24 | 151 | 3.71e-20 | 85.5 |
MsG0880047067.01.T01 | AT1G76410 | 48.649 | 74 | 35 | 1 | 85 | 155 | 73 | 146 | 5.10e-20 | 85.5 |
MsG0880047067.01.T01 | AT5G40250 | 33.987 | 153 | 69 | 4 | 25 | 156 | 45 | 186 | 5.24e-20 | 89.0 |
MsG0880047067.01.T01 | AT1G20823 | 37.594 | 133 | 67 | 5 | 29 | 155 | 31 | 153 | 6.57e-20 | 85.5 |
MsG0880047067.01.T01 | AT1G49220 | 37.671 | 146 | 67 | 6 | 15 | 155 | 51 | 177 | 7.78e-20 | 86.7 |
MsG0880047067.01.T01 | AT5G10380 | 53.425 | 73 | 30 | 2 | 89 | 158 | 109 | 180 | 1.10e-19 | 87.0 |
MsG0880047067.01.T01 | AT4G09110 | 48.750 | 80 | 36 | 2 | 88 | 162 | 93 | 172 | 1.51e-19 | 86.7 |
MsG0880047067.01.T01 | AT2G42350 | 50.685 | 73 | 35 | 1 | 88 | 159 | 74 | 146 | 2.08e-19 | 84.7 |
MsG0880047067.01.T01 | AT4G30400 | 55.714 | 70 | 28 | 1 | 89 | 155 | 107 | 176 | 3.09e-19 | 87.4 |
MsG0880047067.01.T01 | AT3G60220 | 44.231 | 104 | 44 | 2 | 92 | 190 | 91 | 185 | 4.79e-19 | 85.9 |
MsG0880047067.01.T01 | AT2G18650 | 52.113 | 71 | 31 | 1 | 89 | 156 | 99 | 169 | 5.10e-19 | 86.7 |
MsG0880047067.01.T01 | AT4G09100 | 48.684 | 76 | 34 | 1 | 88 | 158 | 55 | 130 | 7.65e-19 | 80.9 |
MsG0880047067.01.T01 | AT4G09130 | 51.316 | 76 | 32 | 1 | 86 | 156 | 88 | 163 | 2.18e-18 | 84.3 |
MsG0880047067.01.T01 | AT1G49200 | 35.172 | 145 | 72 | 5 | 15 | 155 | 52 | 178 | 2.44e-18 | 82.0 |
MsG0880047067.01.T01 | AT5G66070 | 43.662 | 71 | 40 | 0 | 85 | 155 | 148 | 218 | 3.21e-18 | 81.6 |
MsG0880047067.01.T01 | AT5G66070 | 43.662 | 71 | 40 | 0 | 85 | 155 | 148 | 218 | 3.21e-18 | 81.6 |
MsG0880047067.01.T01 | AT5G66070 | 43.662 | 71 | 40 | 0 | 85 | 155 | 172 | 242 | 6.30e-18 | 81.3 |
MsG0880047067.01.T01 | AT4G17245 | 34.810 | 158 | 76 | 6 | 16 | 172 | 31 | 162 | 1.26e-17 | 78.6 |
MsG0880047067.01.T01 | AT3G18930 | 47.561 | 82 | 31 | 2 | 89 | 158 | 120 | 201 | 1.67e-17 | 82.0 |
MsG0880047067.01.T01 | AT3G18930 | 47.561 | 82 | 31 | 2 | 89 | 158 | 120 | 201 | 1.67e-17 | 82.0 |
MsG0880047067.01.T01 | AT3G18930 | 47.561 | 82 | 31 | 2 | 89 | 158 | 120 | 201 | 1.67e-17 | 82.0 |
MsG0880047067.01.T01 | AT1G49210 | 34.722 | 144 | 74 | 5 | 15 | 155 | 51 | 177 | 1.71e-17 | 79.7 |
MsG0880047067.01.T01 | AT4G17920 | 30.729 | 192 | 106 | 6 | 76 | 251 | 73 | 253 | 1.79e-17 | 80.9 |
MsG0880047067.01.T01 | AT3G19140 | 46.250 | 80 | 42 | 1 | 81 | 159 | 46 | 125 | 3.78e-17 | 76.6 |
MsG0880047067.01.T01 | AT3G11110 | 31.373 | 153 | 84 | 3 | 9 | 158 | 18 | 152 | 5.94e-17 | 76.6 |
MsG0880047067.01.T01 | AT2G17450 | 33.824 | 136 | 61 | 4 | 29 | 155 | 29 | 144 | 9.17e-17 | 77.0 |
MsG0880047067.01.T01 | AT1G74410 | 41.333 | 75 | 42 | 1 | 87 | 159 | 148 | 222 | 1.92e-16 | 76.6 |
MsG0880047067.01.T01 | AT3G20395 | 42.647 | 68 | 39 | 0 | 88 | 155 | 146 | 213 | 7.68e-16 | 75.1 |
MsG0880047067.01.T01 | AT5G57750 | 35.455 | 110 | 62 | 2 | 90 | 196 | 96 | 199 | 8.21e-16 | 74.7 |
MsG0880047067.01.T01 | AT5G46650 | 31.724 | 145 | 87 | 4 | 17 | 155 | 19 | 157 | 8.34e-16 | 76.3 |
MsG0880047067.01.T01 | AT2G46493 | 43.836 | 73 | 35 | 2 | 88 | 155 | 109 | 180 | 2.09e-15 | 73.2 |
MsG0880047067.01.T01 | AT4G10150 | 28.834 | 163 | 97 | 6 | 10 | 162 | 7 | 160 | 2.42e-15 | 73.9 |
MsG0880047067.01.T01 | AT1G33480 | 31.210 | 157 | 91 | 5 | 1 | 155 | 1 | 142 | 2.53e-15 | 74.3 |
MsG0880047067.01.T01 | AT4G35840 | 40.541 | 74 | 39 | 1 | 87 | 155 | 160 | 233 | 2.94e-14 | 70.9 |
MsG0880047067.01.T01 | AT5G47610 | 33.333 | 144 | 72 | 5 | 18 | 158 | 30 | 152 | 2.97e-14 | 69.7 |
MsG0880047067.01.T01 | AT4G10160 | 28.105 | 153 | 94 | 6 | 23 | 172 | 18 | 157 | 3.37e-14 | 70.5 |
MsG0880047067.01.T01 | AT2G46160 | 37.500 | 80 | 40 | 1 | 86 | 155 | 101 | 180 | 4.94e-14 | 70.1 |
MsG0880047067.01.T01 | AT2G46160 | 37.500 | 80 | 40 | 1 | 86 | 155 | 101 | 180 | 4.94e-14 | 70.1 |
MsG0880047067.01.T01 | AT5G53110 | 47.887 | 71 | 33 | 2 | 89 | 155 | 302 | 372 | 5.18e-14 | 72.0 |
MsG0880047067.01.T01 | AT2G46494 | 31.061 | 132 | 75 | 4 | 34 | 155 | 233 | 358 | 5.52e-14 | 71.6 |
MsG0880047067.01.T01 | AT2G18670 | 44.000 | 75 | 39 | 1 | 87 | 158 | 81 | 155 | 6.41e-14 | 68.9 |
MsG0880047067.01.T01 | AT3G61550 | 36.082 | 97 | 48 | 2 | 85 | 168 | 95 | 190 | 6.85e-14 | 69.7 |
MsG0880047067.01.T01 | AT4G35480 | 54.167 | 48 | 22 | 0 | 108 | 155 | 108 | 155 | 9.22e-14 | 68.9 |
MsG0880047067.01.T01 | AT2G34000 | 40.541 | 74 | 38 | 1 | 88 | 155 | 60 | 133 | 1.76e-13 | 67.0 |
MsG0880047067.01.T01 | AT1G28040 | 40.260 | 77 | 40 | 2 | 84 | 155 | 220 | 295 | 1.80e-13 | 69.7 |
MsG0880047067.01.T01 | AT2G35910 | 36.905 | 84 | 51 | 1 | 89 | 170 | 121 | 204 | 2.18e-13 | 68.2 |
MsG0880047067.01.T01 | AT2G17730 | 37.838 | 74 | 41 | 1 | 87 | 155 | 165 | 238 | 3.00e-13 | 68.2 |
MsG0880047067.01.T01 | AT2G46495 | 42.105 | 76 | 37 | 2 | 86 | 155 | 288 | 362 | 3.36e-13 | 69.3 |
MsG0880047067.01.T01 | AT2G46495 | 42.105 | 76 | 37 | 2 | 86 | 155 | 260 | 334 | 3.37e-13 | 69.3 |
MsG0880047067.01.T01 | AT5G07040 | 43.243 | 74 | 38 | 2 | 86 | 155 | 63 | 136 | 3.62e-13 | 66.2 |
MsG0880047067.01.T01 | AT4G30370 | 39.437 | 71 | 41 | 1 | 87 | 155 | 87 | 157 | 1.04e-12 | 65.5 |
MsG0880047067.01.T01 | AT1G49230 | 59.091 | 44 | 18 | 0 | 112 | 155 | 130 | 173 | 1.15e-12 | 66.2 |
MsG0880047067.01.T01 | AT4G24015 | 45.455 | 66 | 33 | 1 | 113 | 178 | 105 | 167 | 1.82e-12 | 64.7 |
MsG0880047067.01.T01 | AT3G60966 | 56.000 | 50 | 22 | 0 | 113 | 162 | 62 | 111 | 1.95e-12 | 63.9 |
MsG0880047067.01.T01 | AT2G25410 | 43.243 | 74 | 35 | 2 | 89 | 156 | 298 | 370 | 2.42e-12 | 67.0 |
MsG0880047067.01.T01 | AT5G66160 | 29.197 | 137 | 68 | 5 | 22 | 155 | 164 | 274 | 5.10e-12 | 65.5 |
MsG0880047067.01.T01 | AT1G80400 | 33.673 | 98 | 38 | 2 | 87 | 158 | 303 | 399 | 5.39e-12 | 65.9 |
MsG0880047067.01.T01 | AT2G44578 | 48.000 | 50 | 26 | 0 | 113 | 162 | 70 | 119 | 8.75e-12 | 62.0 |
MsG0880047067.01.T01 | AT5G66160 | 29.197 | 137 | 68 | 5 | 22 | 155 | 164 | 274 | 1.11e-11 | 64.3 |
MsG0880047067.01.T01 | AT3G47990 | 41.558 | 77 | 43 | 2 | 82 | 158 | 148 | 222 | 1.46e-11 | 63.9 |
MsG0880047067.01.T01 | AT3G47990 | 41.558 | 77 | 43 | 2 | 82 | 158 | 148 | 222 | 1.46e-11 | 63.9 |
MsG0880047067.01.T01 | AT3G47990 | 41.558 | 77 | 43 | 2 | 82 | 158 | 148 | 222 | 1.46e-11 | 63.9 |
MsG0880047067.01.T01 | AT3G47990 | 41.558 | 77 | 43 | 2 | 82 | 158 | 189 | 263 | 1.90e-11 | 63.9 |
MsG0880047067.01.T01 | AT5G06490 | 39.655 | 58 | 35 | 0 | 113 | 170 | 129 | 186 | 2.36e-11 | 62.0 |
MsG0880047067.01.T01 | AT3G47990 | 41.558 | 77 | 43 | 2 | 82 | 158 | 205 | 279 | 2.78e-11 | 63.5 |
MsG0880047067.01.T01 | AT5G36001 | 43.103 | 58 | 33 | 0 | 113 | 170 | 264 | 321 | 3.10e-11 | 63.2 |
MsG0880047067.01.T01 | AT2G44581 | 46.000 | 50 | 27 | 0 | 113 | 162 | 70 | 119 | 4.76e-11 | 60.1 |
MsG0880047067.01.T01 | AT2G28920 | 48.936 | 47 | 24 | 0 | 113 | 159 | 93 | 139 | 7.16e-11 | 59.7 |
MsG0880047067.01.T01 | AT1G53010 | 41.558 | 77 | 36 | 2 | 88 | 155 | 96 | 172 | 8.29e-11 | 60.1 |
Find 78 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGGAGGAAAATTTGAAAAC+TGG | 0.283949 | 8:-81523389 | None:intergenic |
ATGAAAACTATGATTACATT+TGG | 0.299280 | 8:-81523483 | None:intergenic |
GTGTGAACCGGAACTTGTTT+TGG | 0.322681 | 8:+81523616 | MsG0880047067.01.T01:CDS |
GGAATGCGCCGTTTGTTTAT+CGG | 0.330164 | 8:+81523427 | MsG0880047067.01.T01:CDS |
CACTGACACTCGCCGTCTCT+CGG | 0.334310 | 8:+81523336 | MsG0880047067.01.T01:CDS |
GTAGAAGGTAGTATCGAATT+AGG | 0.341163 | 8:-81523226 | None:intergenic |
ACGGCGAGTGTCAGTGAAGC+AGG | 0.351809 | 8:-81523329 | None:intergenic |
CCATCGGATTCACTCCTTCT+CGG | 0.377768 | 8:-81523740 | None:intergenic |
TTGAACCGGCGCAGCTTCCA+CGG | 0.388366 | 8:-81523564 | None:intergenic |
ACTGACACTCGCCGTCTCTC+GGG | 0.389127 | 8:+81523337 | MsG0880047067.01.T01:CDS |
GGTAGTATCGAATTAGGAAA+TGG | 0.407736 | 8:-81523220 | None:intergenic |
ATCAATTGTCACTTCTTGTC+TGG | 0.408505 | 8:-81523591 | None:intergenic |
TGAAAACTATGATTACATTT+GGG | 0.416800 | 8:-81523482 | None:intergenic |
CTCGAACCCAAAACAAGTTC+CGG | 0.417855 | 8:-81523623 | None:intergenic |
GAACAAGACGAAGAAAATTC+CGG | 0.421531 | 8:-81523674 | None:intergenic |
GTGATTCACCATCATCGTTT+CGG | 0.423925 | 8:+81523792 | MsG0880047067.01.T01:CDS |
TTGGTTTCCTTTCTCTGCTA+AGG | 0.426772 | 8:-81523850 | None:intergenic |
TCTTGTCTGGTCGCTTGAAC+CGG | 0.440920 | 8:-81523578 | None:intergenic |
AGCGCCCGTGGAAGCTGCGC+CGG | 0.452115 | 8:+81523559 | MsG0880047067.01.T01:CDS |
GACGACGGAGACGGCGGTTA+CGG | 0.452611 | 8:-81523274 | None:intergenic |
ACCAAGCATTTCTCCGTCGT+TGG | 0.459024 | 8:+81523868 | MsG0880047067.01.T01:CDS |
TGAAATGAACCGGTCTGAAC+CGG | 0.460450 | 8:+81523655 | MsG0880047067.01.T01:CDS |
AACGACAACACACGACTCAT+TGG | 0.469207 | 8:-81523818 | None:intergenic |
TGAACCGGCGCAGCTTCCAC+GGG | 0.471173 | 8:-81523563 | None:intergenic |
TGTTTATCGGAGTTTGAAGA+TGG | 0.477912 | 8:+81523440 | MsG0880047067.01.T01:CDS |
TTCCACCACCTGATCCGTCT+TGG | 0.480142 | 8:-81523408 | None:intergenic |
AAGAAAATTCCGGTTCAGAC+CGG | 0.480508 | 8:-81523664 | None:intergenic |
GTCAGTGAAGCAGGGGCAGA+CGG | 0.481036 | 8:-81523320 | None:intergenic |
CGAGAATCCTTAGCAGAGAA+AGG | 0.487933 | 8:+81523843 | MsG0880047067.01.T01:CDS |
GAGTTTGAAGATGGAGAAAC+GGG | 0.488929 | 8:+81523449 | MsG0880047067.01.T01:CDS |
AACGGCGAAGAGGATGATAA+TGG | 0.493276 | 8:-81523177 | None:intergenic |
TGAAGATGGAGAAACGGGTC+GGG | 0.495626 | 8:+81523454 | MsG0880047067.01.T01:CDS |
GGCATCAAGGCCCCGAGAGA+CGG | 0.498550 | 8:-81523348 | None:intergenic |
CACCACCTGATCCGTCTTGG+AGG | 0.502873 | 8:-81523405 | None:intergenic |
ATATTGATTGTATTGATATG+TGG | 0.504133 | 8:+81523504 | MsG0880047067.01.T01:CDS |
ATTGGCGACCGAAACGATGA+TGG | 0.508470 | 8:-81523800 | None:intergenic |
GACAATTGATGTGTGTGAAC+CGG | 0.509320 | 8:+81523604 | MsG0880047067.01.T01:CDS |
TATTGCAGAACGAGGTGAAA+AGG | 0.510630 | 8:+81523904 | MsG0880047067.01.T01:CDS |
CTCCAAGACGGATCAGGTGG+TGG | 0.516407 | 8:+81523406 | MsG0880047067.01.T01:CDS |
GACGTGTGCGATCACGTAGA+AGG | 0.517495 | 8:-81523241 | None:intergenic |
TCAGTGAAGCAGGGGCAGAC+GGG | 0.518189 | 8:-81523319 | None:intergenic |
TGGAGGAAAATTTGAAAACT+GGG | 0.524531 | 8:-81523388 | None:intergenic |
CACGGCAAAGCTCTTGCCAT+CGG | 0.525835 | 8:-81523756 | None:intergenic |
GTTCTGGTGATGAAATGAAC+CGG | 0.531521 | 8:+81523645 | MsG0880047067.01.T01:CDS |
GGAGTTTGAAGATGGAGAAA+CGG | 0.532659 | 8:+81523448 | MsG0880047067.01.T01:CDS |
ACAGAGCATTATTATGATAA+CGG | 0.539071 | 8:-81523195 | None:intergenic |
ACTCCTTCTCGGAATCTCAA+TGG | 0.541371 | 8:-81523729 | None:intergenic |
TTCAAACTCCGATAAACAAA+CGG | 0.541934 | 8:-81523435 | None:intergenic |
GGAGACGGCGGTTACGGCGG+AGG | 0.544790 | 8:-81523268 | None:intergenic |
TCCAACGACGGAGAAATGCT+TGG | 0.549021 | 8:-81523869 | None:intergenic |
AACTGGGAGCGACGAGATCA+CGG | 0.551506 | 8:-81523372 | None:intergenic |
TCCGCTTTGTAGAGCGCCCG+TGG | 0.552902 | 8:+81523547 | MsG0880047067.01.T01:CDS |
ACGAGATCACGGAGGCATCA+AGG | 0.555401 | 8:-81523361 | None:intergenic |
GGCGAGTGTCAGTGAAGCAG+GGG | 0.563336 | 8:-81523327 | None:intergenic |
CGGCGAGTGTCAGTGAAGCA+GGG | 0.581817 | 8:-81523328 | None:intergenic |
TTGAAGATGGAGAAACGGGT+CGG | 0.584820 | 8:+81523453 | MsG0880047067.01.T01:CDS |
TGAAAGGTTGACGACGGAGA+CGG | 0.589325 | 8:-81523283 | None:intergenic |
ACCTCGTTCTGCAATATCTG+CGG | 0.591425 | 8:-81523897 | None:intergenic |
GACGGAGACGGCGGTTACGG+CGG | 0.602620 | 8:-81523271 | None:intergenic |
CGATGGCAAGAGCTTTGCCG+TGG | 0.602697 | 8:+81523757 | MsG0880047067.01.T01:CDS |
GTCTCAAATGAATTCGAACA+TGG | 0.603446 | 8:+81523097 | MsG0880047067.01.T01:CDS |
CTGACACTCGCCGTCTCTCG+GGG | 0.605797 | 8:+81523338 | MsG0880047067.01.T01:CDS |
TTCCTCCAAGACGGATCAGG+TGG | 0.606936 | 8:+81523403 | MsG0880047067.01.T01:CDS |
ATCACAACTCGACTCTCCCA+CGG | 0.626421 | 8:-81523774 | None:intergenic |
GGGTCCACGTAAAAGATGAA+AGG | 0.629082 | 8:-81523299 | None:intergenic |
TGCAGAACGAGGTGAAAAGG+AGG | 0.635492 | 8:+81523907 | MsG0880047067.01.T01:CDS |
CCGAGAAGGAGTGAATCCGA+TGG | 0.651699 | 8:+81523740 | MsG0880047067.01.T01:CDS |
GATGGCAAGAGCTTTGCCGT+GGG | 0.662786 | 8:+81523758 | MsG0880047067.01.T01:CDS |
TTATTATGATAACGGCGAAG+AGG | 0.667324 | 8:-81523187 | None:intergenic |
TTACCATTGAGATTCCGAGA+AGG | 0.670162 | 8:+81523726 | MsG0880047067.01.T01:CDS |
TCCACGGGCGCTCTACAAAG+CGG | 0.672898 | 8:-81523548 | None:intergenic |
AAAAGATGAAAGGTTGACGA+CGG | 0.702866 | 8:-81523289 | None:intergenic |
AAGGTTGACGACGGAGACGG+CGG | 0.704525 | 8:-81523280 | None:intergenic |
GCCGCAGATATTGCAGAACG+AGG | 0.709117 | 8:+81523896 | MsG0880047067.01.T01:CDS |
GGCGAAGAGGATGATAATGG+CGG | 0.719661 | 8:-81523174 | None:intergenic |
GAAAACAACTATGCACTCAG+CGG | 0.745204 | 8:+81523137 | MsG0880047067.01.T01:CDS |
TCTGCGGCACAATCCAACGA+CGG | 0.746054 | 8:-81523881 | None:intergenic |
TGGGAGCGACGAGATCACGG+AGG | 0.805089 | 8:-81523369 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAAAACTATGATTACATT+TGG | - | Chr8:81523486-81523505 | None:intergenic | 20.0% |
!! | TGAAAACTATGATTACATTT+GGG | - | Chr8:81523485-81523504 | None:intergenic | 20.0% |
!!! | ATATTGATTGTATTGATATG+TGG | + | Chr8:81523504-81523523 | MsG0880047067.01.T01:CDS | 20.0% |
!! | ACAGAGCATTATTATGATAA+CGG | - | Chr8:81523198-81523217 | None:intergenic | 25.0% |
TGGAGGAAAATTTGAAAACT+GGG | - | Chr8:81523391-81523410 | None:intergenic | 30.0% | |
TTCAAACTCCGATAAACAAA+CGG | - | Chr8:81523438-81523457 | None:intergenic | 30.0% | |
TTGGAGGAAAATTTGAAAAC+TGG | - | Chr8:81523392-81523411 | None:intergenic | 30.0% | |
! | TTTCAAATTTTCCTCCAAGA+CGG | + | Chr8:81523394-81523413 | MsG0880047067.01.T01:CDS | 30.0% |
AAAAGATGAAAGGTTGACGA+CGG | - | Chr8:81523292-81523311 | None:intergenic | 35.0% | |
GAACAAGACGAAGAAAATTC+CGG | - | Chr8:81523677-81523696 | None:intergenic | 35.0% | |
GTCTCAAATGAATTCGAACA+TGG | + | Chr8:81523097-81523116 | MsG0880047067.01.T01:CDS | 35.0% | |
TGTTTATCGGAGTTTGAAGA+TGG | + | Chr8:81523440-81523459 | MsG0880047067.01.T01:CDS | 35.0% | |
! | ATCAATTGTCACTTCTTGTC+TGG | - | Chr8:81523594-81523613 | None:intergenic | 35.0% |
! | GGTAGTATCGAATTAGGAAA+TGG | - | Chr8:81523223-81523242 | None:intergenic | 35.0% |
! | GTAGAAGGTAGTATCGAATT+AGG | - | Chr8:81523229-81523248 | None:intergenic | 35.0% |
! | TCAACCTTTCATCTTTTACG+TGG | + | Chr8:81523295-81523314 | MsG0880047067.01.T01:CDS | 35.0% |
!! | TTATTATGATAACGGCGAAG+AGG | - | Chr8:81523190-81523209 | None:intergenic | 35.0% |
AAGAAAATTCCGGTTCAGAC+CGG | - | Chr8:81523667-81523686 | None:intergenic | 40.0% | |
GAAAACAACTATGCACTCAG+CGG | + | Chr8:81523137-81523156 | MsG0880047067.01.T01:CDS | 40.0% | |
GACAATTGATGTGTGTGAAC+CGG | + | Chr8:81523604-81523623 | MsG0880047067.01.T01:CDS | 40.0% | |
GAGTTTGAAGATGGAGAAAC+GGG | + | Chr8:81523449-81523468 | MsG0880047067.01.T01:CDS | 40.0% | |
GGAGTTTGAAGATGGAGAAA+CGG | + | Chr8:81523448-81523467 | MsG0880047067.01.T01:CDS | 40.0% | |
GTGATTCACCATCATCGTTT+CGG | + | Chr8:81523792-81523811 | MsG0880047067.01.T01:CDS | 40.0% | |
TATTGCAGAACGAGGTGAAA+AGG | + | Chr8:81523904-81523923 | MsG0880047067.01.T01:CDS | 40.0% | |
TTACCATTGAGATTCCGAGA+AGG | + | Chr8:81523726-81523745 | MsG0880047067.01.T01:CDS | 40.0% | |
TTGGTTTCCTTTCTCTGCTA+AGG | - | Chr8:81523853-81523872 | None:intergenic | 40.0% | |
! | GTTCTGGTGATGAAATGAAC+CGG | + | Chr8:81523645-81523664 | MsG0880047067.01.T01:CDS | 40.0% |
!! | TGTGAACCGGAACTTGTTTT+GGG | + | Chr8:81523617-81523636 | MsG0880047067.01.T01:CDS | 40.0% |
AACGACAACACACGACTCAT+TGG | - | Chr8:81523821-81523840 | None:intergenic | 45.0% | |
AACGGCGAAGAGGATGATAA+TGG | - | Chr8:81523180-81523199 | None:intergenic | 45.0% | |
ACCTCGTTCTGCAATATCTG+CGG | - | Chr8:81523900-81523919 | None:intergenic | 45.0% | |
ACTCCTTCTCGGAATCTCAA+TGG | - | Chr8:81523732-81523751 | None:intergenic | 45.0% | |
CGAGAATCCTTAGCAGAGAA+AGG | + | Chr8:81523843-81523862 | MsG0880047067.01.T01:CDS | 45.0% | |
CTCGAACCCAAAACAAGTTC+CGG | - | Chr8:81523626-81523645 | None:intergenic | 45.0% | |
GGAATGCGCCGTTTGTTTAT+CGG | + | Chr8:81523427-81523446 | MsG0880047067.01.T01:CDS | 45.0% | |
GGGTCCACGTAAAAGATGAA+AGG | - | Chr8:81523302-81523321 | None:intergenic | 45.0% | |
TGAAATGAACCGGTCTGAAC+CGG | + | Chr8:81523655-81523674 | MsG0880047067.01.T01:CDS | 45.0% | |
TTGAAGATGGAGAAACGGGT+CGG | + | Chr8:81523453-81523472 | MsG0880047067.01.T01:CDS | 45.0% | |
! | ATTTTCCTCCAAGACGGATC+AGG | + | Chr8:81523400-81523419 | MsG0880047067.01.T01:CDS | 45.0% |
!! | GTGTGAACCGGAACTTGTTT+TGG | + | Chr8:81523616-81523635 | MsG0880047067.01.T01:CDS | 45.0% |
!!! | CTTGTTTTGGGTTCGAGTTC+TGG | + | Chr8:81523629-81523648 | MsG0880047067.01.T01:CDS | 45.0% |
ACCAAGCATTTCTCCGTCGT+TGG | + | Chr8:81523868-81523887 | MsG0880047067.01.T01:CDS | 50.0% | |
ATCACAACTCGACTCTCCCA+CGG | - | Chr8:81523777-81523796 | None:intergenic | 50.0% | |
ATTGGCGACCGAAACGATGA+TGG | - | Chr8:81523803-81523822 | None:intergenic | 50.0% | |
CCATCGGATTCACTCCTTCT+CGG | - | Chr8:81523743-81523762 | None:intergenic | 50.0% | |
TCCAACGACGGAGAAATGCT+TGG | - | Chr8:81523872-81523891 | None:intergenic | 50.0% | |
TCTTGTCTGGTCGCTTGAAC+CGG | - | Chr8:81523581-81523600 | None:intergenic | 50.0% | |
TGAAAGGTTGACGACGGAGA+CGG | - | Chr8:81523286-81523305 | None:intergenic | 50.0% | |
TGAAGATGGAGAAACGGGTC+GGG | + | Chr8:81523454-81523473 | MsG0880047067.01.T01:CDS | 50.0% | |
TGCAGAACGAGGTGAAAAGG+AGG | + | Chr8:81523907-81523926 | MsG0880047067.01.T01:CDS | 50.0% | |
!! | GGCGAAGAGGATGATAATGG+CGG | - | Chr8:81523177-81523196 | None:intergenic | 50.0% |
AACTGGGAGCGACGAGATCA+CGG | - | Chr8:81523375-81523394 | None:intergenic | 55.0% | |
CACGGCAAAGCTCTTGCCAT+CGG | - | Chr8:81523759-81523778 | None:intergenic | 55.0% | |
CCGAGAAGGAGTGAATCCGA+TGG | + | Chr8:81523740-81523759 | MsG0880047067.01.T01:CDS | 55.0% | |
GACGTGTGCGATCACGTAGA+AGG | - | Chr8:81523244-81523263 | None:intergenic | 55.0% | |
GATGGCAAGAGCTTTGCCGT+GGG | + | Chr8:81523758-81523777 | MsG0880047067.01.T01:CDS | 55.0% | |
GCCGCAGATATTGCAGAACG+AGG | + | Chr8:81523896-81523915 | MsG0880047067.01.T01:CDS | 55.0% | |
TCTGCGGCACAATCCAACGA+CGG | - | Chr8:81523884-81523903 | None:intergenic | 55.0% | |
TTCCACCACCTGATCCGTCT+TGG | - | Chr8:81523411-81523430 | None:intergenic | 55.0% | |
TTCCTCCAAGACGGATCAGG+TGG | + | Chr8:81523403-81523422 | MsG0880047067.01.T01:CDS | 55.0% | |
!! | ACGAGATCACGGAGGCATCA+AGG | - | Chr8:81523364-81523383 | None:intergenic | 55.0% |
AAGGTTGACGACGGAGACGG+CGG | - | Chr8:81523283-81523302 | None:intergenic | 60.0% | |
ACGGCGAGTGTCAGTGAAGC+AGG | - | Chr8:81523332-81523351 | None:intergenic | 60.0% | |
ACTGACACTCGCCGTCTCTC+GGG | + | Chr8:81523337-81523356 | MsG0880047067.01.T01:CDS | 60.0% | |
CACCACCTGATCCGTCTTGG+AGG | - | Chr8:81523408-81523427 | None:intergenic | 60.0% | |
CACTGACACTCGCCGTCTCT+CGG | + | Chr8:81523336-81523355 | MsG0880047067.01.T01:CDS | 60.0% | |
CGATGGCAAGAGCTTTGCCG+TGG | + | Chr8:81523757-81523776 | MsG0880047067.01.T01:CDS | 60.0% | |
CGGCGAGTGTCAGTGAAGCA+GGG | - | Chr8:81523331-81523350 | None:intergenic | 60.0% | |
CTCCAAGACGGATCAGGTGG+TGG | + | Chr8:81523406-81523425 | MsG0880047067.01.T01:CDS | 60.0% | |
GGCGAGTGTCAGTGAAGCAG+GGG | - | Chr8:81523330-81523349 | None:intergenic | 60.0% | |
GTCAGTGAAGCAGGGGCAGA+CGG | - | Chr8:81523323-81523342 | None:intergenic | 60.0% | |
TCAGTGAAGCAGGGGCAGAC+GGG | - | Chr8:81523322-81523341 | None:intergenic | 60.0% | |
TCCACGGGCGCTCTACAAAG+CGG | - | Chr8:81523551-81523570 | None:intergenic | 60.0% | |
TTGAACCGGCGCAGCTTCCA+CGG | - | Chr8:81523567-81523586 | None:intergenic | 60.0% | |
CTGACACTCGCCGTCTCTCG+GGG | + | Chr8:81523338-81523357 | MsG0880047067.01.T01:CDS | 65.0% | |
GACGACGGAGACGGCGGTTA+CGG | - | Chr8:81523277-81523296 | None:intergenic | 65.0% | |
GGCATCAAGGCCCCGAGAGA+CGG | - | Chr8:81523351-81523370 | None:intergenic | 65.0% | |
TGAACCGGCGCAGCTTCCAC+GGG | - | Chr8:81523566-81523585 | None:intergenic | 65.0% | |
TGGGAGCGACGAGATCACGG+AGG | - | Chr8:81523372-81523391 | None:intergenic | 65.0% | |
! | TCCGCTTTGTAGAGCGCCCG+TGG | + | Chr8:81523547-81523566 | MsG0880047067.01.T01:CDS | 65.0% |
GACGGAGACGGCGGTTACGG+CGG | - | Chr8:81523274-81523293 | None:intergenic | 70.0% | |
AGCGCCCGTGGAAGCTGCGC+CGG | + | Chr8:81523559-81523578 | MsG0880047067.01.T01:CDS | 75.0% | |
GGAGACGGCGGTTACGGCGG+AGG | - | Chr8:81523271-81523290 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 81523095 | 81523940 | 81523095 | ID=MsG0880047067.01;Name=MsG0880047067.01 |
Chr8 | mRNA | 81523095 | 81523940 | 81523095 | ID=MsG0880047067.01.T01;Parent=MsG0880047067.01;Name=MsG0880047067.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|281 |
Chr8 | exon | 81523095 | 81523940 | 81523095 | ID=MsG0880047067.01.T01:exon:34943;Parent=MsG0880047067.01.T01 |
Chr8 | CDS | 81523095 | 81523940 | 81523095 | ID=MsG0880047067.01.T01:cds;Parent=MsG0880047067.01.T01 |
Gene Sequence |
Protein sequence |