AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047208.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047208.01.T01 MTR_3g015130 98.883 179 2 0 1 179 1 179 3.16e-128 357
MsG0880047208.01.T01 MTR_4g123000 97.207 179 5 0 1 179 1 179 1.66e-126 353
MsG0880047208.01.T01 MTR_6g027990 74.510 51 13 0 77 127 36 86 3.60e-19 79.0
MsG0880047208.01.T02 MTR_3g015130 98.883 179 2 0 1 179 1 179 3.16e-128 357
MsG0880047208.01.T02 MTR_4g123000 97.207 179 5 0 1 179 1 179 1.66e-126 353
MsG0880047208.01.T02 MTR_6g027990 74.510 51 13 0 77 127 36 86 3.60e-19 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047208.01.T01 AT1G54140 66.484 182 53 2 4 178 3 183 1.80e-75 224
MsG0880047208.01.T02 AT1G54140 66.484 182 53 2 4 178 3 183 1.80e-75 224

Find 46 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATGGTAAAAGTCTAAA+AGG 0.222618 8:-83292232 None:intergenic
TCTATTCAAATTGTATATTA+TGG 0.227103 8:+83293667 MsG0880047208.01.T01:five_prime_UTR
CACTTCGATGTTGAATGTTA+TGG 0.290833 8:-83292129 None:intergenic
AAAGACAATGAGAACTAGTT+TGG 0.331882 8:-83292181 None:intergenic
TGGTAGAAGCCGAGCAGTTC+AGG 0.349725 8:+83293739 MsG0880047208.01.T01:five_prime_UTR
GAGAAGAGAGAAAGGATGTT+AGG 0.350802 8:-83293951 None:intergenic
CCGCTACCCGCCCATGCTGC+TGG 0.372826 8:-83293774 None:intergenic
CTAAAAGGGCAAGTTGTTGC+TGG 0.373821 8:-83292217 None:intergenic
TGTTGTGTTGTGTTTGAACT+TGG 0.403773 8:+83292322 MsG0880047208.01.T02:five_prime_UTR
GCCGCCGTCTTCCTCTGTTC+AGG 0.403897 8:+83293986 MsG0880047208.01.T01:five_prime_UTR
ATTCAACATCGAAGTGATTC+CGG 0.406187 8:+83292136 MsG0880047208.01.T02:five_prime_UTR
TGTAAGAAGAGGAAAATGTT+AGG 0.411772 8:-83293884 None:intergenic
ACAAGGTATCCTTCTGATTC+TGG 0.420066 8:-83292293 None:intergenic
GATCCGCTATGTATTTGAAC+AGG 0.425732 8:+83293802 MsG0880047208.01.T01:five_prime_UTR
CAAACACAGACAAAGTGAAT+TGG 0.433253 8:-83292350 None:intergenic
ACAACATAGATTAAATTTGA+AGG 0.465211 8:+83293640 MsG0880047208.01.T01:five_prime_UTR
TGTCGCCGAGTGGCAAATAA+TGG 0.485126 8:+83293719 MsG0880047208.01.T01:five_prime_UTR
CCAGCAGCATGGGCGGGTAG+CGG 0.487138 8:+83293774 MsG0880047208.01.T01:five_prime_UTR
TTTCTCTCTTCTCACTGCAT+CGG 0.503708 8:+83293961 MsG0880047208.01.T01:five_prime_UTR
AGCGACCACTCCAGCAGCAT+GGG 0.512379 8:+83293764 MsG0880047208.01.T01:five_prime_UTR
GATGCAGTGAGAAGAGAGAA+AGG 0.519286 8:-83293959 None:intergenic
TTCTACCATTATTTGCCACT+CGG 0.519914 8:-83293724 None:intergenic
ACCACTCCAGCAGCATGGGC+GGG 0.521133 8:+83293768 MsG0880047208.01.T01:five_prime_UTR
TAGTCAATAGCGCGATATAG+TGG 0.521712 8:+83293696 MsG0880047208.01.T01:five_prime_UTR
TTGATGGTAAAAGTCTAAAA+GGG 0.526796 8:-83292231 None:intergenic
GTAAGAAGAGGAAAATGTTA+GGG 0.530954 8:-83293883 None:intergenic
CAAGTTGTTGCTGGCGCAAG+AGG 0.539032 8:-83292208 None:intergenic
GACCACTCCAGCAGCATGGG+CGG 0.542395 8:+83293767 MsG0880047208.01.T01:five_prime_UTR
ACCCGCCCATGCTGCTGGAG+TGG 0.557353 8:-83293769 None:intergenic
TGAACAGAGGAAGACGGCGG+CGG 0.563959 8:-83293984 None:intergenic
AGATTATGAAATTGACTCGC+CGG 0.575006 8:-83292155 None:intergenic
TAGCGACCACTCCAGCAGCA+TGG 0.575044 8:+83293763 MsG0880047208.01.T01:five_prime_UTR
AGTGAGAAGAGAGAAAGAGT+TGG 0.584394 8:-83293916 None:intergenic
ATCGACACAAGCTTCAACCA+CGG 0.598119 8:+83292378 MsG0880047208.01.T02:five_prime_UTR
TCGACACAAGCTTCAACCAC+GGG 0.603695 8:+83292379 MsG0880047208.01.T02:five_prime_UTR
GGCAGATCGCGTGTAAGAAG+AGG 0.604437 8:-83293895 None:intergenic
GGTCGCTAACCTGAACTGCT+CGG 0.622113 8:-83293748 None:intergenic
CTCCAACCGAGTCACTCACT+CGG 0.624833 8:+83292103 None:intergenic
TATCGCGCTATTGACTACTC+TGG 0.636851 8:-83293690 None:intergenic
GATATAGTGGTGTCGCCGAG+TGG 0.648902 8:+83293709 MsG0880047208.01.T01:five_prime_UTR
AGTTCACGACCAGAATCAGA+AGG 0.651712 8:+83292284 MsG0880047208.01.T02:five_prime_UTR
ACAACACAACACAACACACA+AGG 0.655463 8:-83292310 None:intergenic
ATAACCTGAACAGAGGAAGA+CGG 0.680075 8:-83293990 None:intergenic
TTTCCTGTTCAAATACATAG+CGG 0.687354 8:-83293805 None:intergenic
TAGGAACATAACCTGAACAG+AGG 0.689675 8:-83293997 None:intergenic
ACCTGAACAGAGGAAGACGG+CGG 0.753105 8:-83293987 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTTACAAATAGTTTA+GGG - Chr8:83298030-83298049 None:intergenic 10.0%
!! ATTTATTAGTAATTGTAATT+AGG + Chr8:83298121-83298140 MsG0880047208.01.T01:intron 10.0%
!! TAAAAATTTACAAATAGTTT+AGG - Chr8:83298031-83298050 None:intergenic 10.0%
!! TTAATATGTTATTATCATTA+TGG + Chr8:83292461-83292480 MsG0880047208.01.T02:intron 10.0%
!! TTACAATTACTAATAAATTT+AGG - Chr8:83298119-83298138 None:intergenic 10.0%
!!! ATTACAATTTATTTTAGTTT+AGG - Chr8:83298062-83298081 None:intergenic 10.0%
!!! CTATTTGTAAATTTTTAAAT+AGG + Chr8:83298034-83298053 MsG0880047208.01.T01:intron 10.0%
!!! GAAATTATTTTAAGTTTAAA+AGG + Chr8:83298283-83298302 MsG0880047208.01.T01:intron 10.0%
!!! TTACAATTTATTTTAGTTTA+GGG - Chr8:83298061-83298080 None:intergenic 10.0%
!!! TTTTAATTAAAATGTAATCA+TGG - Chr8:83297007-83297026 None:intergenic 10.0%
!! AAAACATAAAAAAAAAGAGT+AGG + Chr8:83297234-83297253 MsG0880047208.01.T01:intron 15.0%
!! AAAATAAGATAGATTAGATT+AGG + Chr8:83292507-83292526 MsG0880047208.01.T02:intron 15.0%
!! ACAATTGAAGAATAAAATTA+AGG + Chr8:83297270-83297289 MsG0880047208.01.T01:intron 15.0%
!! ATTAAATGTTAGTATGTTAA+TGG - Chr8:83293212-83293231 None:intergenic 15.0%
!! ATTACAAATATGTTTAATGT+AGG + Chr8:83298399-83298418 MsG0880047208.01.T01:intron 15.0%
!! CAATTGAAGAATAAAATTAA+GGG + Chr8:83297271-83297290 MsG0880047208.01.T01:intron 15.0%
!! TCTATTCAAATTGTATATTA+TGG + Chr8:83293667-83293686 MsG0880047208.01.T01:five_prime_UTR 15.0%
!! TTATAACAAAGATAAAAAGT+AGG - Chr8:83298989-83299008 None:intergenic 15.0%
!!! AACAGTTTTAAAAGTAAATT+TGG - Chr8:83293834-83293853 None:intergenic 15.0%
!!! ACAGTTTTAAAAGTAAATTT+GGG - Chr8:83293833-83293852 None:intergenic 15.0%
!!! ATTAAAAACTTTTCAGTTTA+AGG - Chr8:83298148-83298167 None:intergenic 15.0%
!!! GAATATTTTTGACAAATATA+GGG + Chr8:83298371-83298390 MsG0880047208.01.T01:intron 15.0%
!!! GCTGTTTTTTATAAATATTA+TGG + Chr8:83294623-83294642 MsG0880047208.01.T01:intron 15.0%
!!! TAAACTGAAAAGTTTTTAAT+TGG + Chr8:83298148-83298167 MsG0880047208.01.T01:intron 15.0%
!!! TACTTATAAAACTTTTTTAC+AGG + Chr8:83292842-83292861 MsG0880047208.01.T02:intron 15.0%
!!! TGAATATTTTTGACAAATAT+AGG + Chr8:83298370-83298389 MsG0880047208.01.T01:intron 15.0%
!!! TTTTTTGTGTAAAGAAAATT+TGG - Chr8:83295261-83295280 None:intergenic 15.0%
!! AAAGATTATTTAAAAGTCCA+GGG + Chr8:83298315-83298334 MsG0880047208.01.T01:intron 20.0%
!! AATTATCATGATTGACTAAA+TGG + Chr8:83296662-83296681 MsG0880047208.01.T01:intron 20.0%
!! ACAACATAGATTAAATTTGA+AGG + Chr8:83293640-83293659 MsG0880047208.01.T01:five_prime_UTR 20.0%
!! ATATCATTAGACATAATTCA+TGG + Chr8:83294363-83294382 MsG0880047208.01.T01:intron 20.0%
!! ATTAAAAGATTTCTTGAAAG+CGG - Chr8:83295403-83295422 None:intergenic 20.0%
!! CATTCATGAATAAAAAATAC+AGG - Chr8:83294142-83294161 None:intergenic 20.0%
!! CTGTTAAAAAAAAAGGTTTA+AGG - Chr8:83298175-83298194 None:intergenic 20.0%
!! GAATTATGTCTAATGATATA+GGG - Chr8:83294362-83294381 None:intergenic 20.0%
!! TAAAGATTATTTAAAAGTCC+AGG + Chr8:83298314-83298333 MsG0880047208.01.T01:intron 20.0%
!! TACACAAAAAAACTTATTGT+AGG + Chr8:83295270-83295289 MsG0880047208.01.T01:intron 20.0%
!! TAGATTAAGAAAATAGTTCA+GGG + Chr8:83298340-83298359 MsG0880047208.01.T01:intron 20.0%
!! TGAATTATGTCTAATGATAT+AGG - Chr8:83294363-83294382 None:intergenic 20.0%
!! TTATTTGAGGATTCTTAAAT+AGG - Chr8:83298427-83298446 None:intergenic 20.0%
!! TTGTAACTACTTTGTAATAT+GGG + Chr8:83294911-83294930 MsG0880047208.01.T01:intron 20.0%
!! TTTGTAACTACTTTGTAATA+TGG + Chr8:83294910-83294929 MsG0880047208.01.T01:intron 20.0%
!!! AAGATTTTTTCAATCTTTGA+TGG - Chr8:83292250-83292269 None:intergenic 20.0%
!!! AATCATGGCATTTTTTTTTT+TGG - Chr8:83296992-83297011 None:intergenic 20.0%
!!! AATGTTTTTTGTGTTAAGAA+AGG - Chr8:83295436-83295455 None:intergenic 20.0%
!!! ACAAACTATTTTAAGGTTTA+AGG - Chr8:83298202-83298221 None:intergenic 20.0%
!!! ATAAGAACATTTGACTTTTT+CGG + Chr8:83297756-83297775 MsG0880047208.01.T01:intron 20.0%
!!! CATTATTACATGTTGTTATT+TGG + Chr8:83294393-83294412 MsG0880047208.01.T01:intron 20.0%
!!! GTAATAAAAAGCGAATTTTA+GGG + Chr8:83298859-83298878 MsG0880047208.01.T01:three_prime_UTR 20.0%
!!! GTAATGCAATTTTTTACTAA+TGG + Chr8:83296766-83296785 MsG0880047208.01.T01:intron 20.0%
!!! TAAACCTTTTTTTTTAACAG+CGG + Chr8:83298175-83298194 MsG0880047208.01.T01:intron 20.0%
!!! TACTTTTAAAACTGTTTTGA+GGG + Chr8:83293838-83293857 MsG0880047208.01.T01:five_prime_UTR 20.0%
!!! TCATTTGTCTTTTTTTTCAT+GGG + Chr8:83296196-83296215 MsG0880047208.01.T01:intron 20.0%
!!! TGTAATAAAAAGCGAATTTT+AGG + Chr8:83298858-83298877 MsG0880047208.01.T01:three_prime_UTR 20.0%
!!! TGTTACTAAACTATCTATTT+TGG - Chr8:83296890-83296909 None:intergenic 20.0%
!!! TTAAATATTTTCTCATTGAC+AGG - Chr8:83293184-83293203 None:intergenic 20.0%
!!! TTACTTTTAAAACTGTTTTG+AGG + Chr8:83293837-83293856 MsG0880047208.01.T01:five_prime_UTR 20.0%
!!! TTTTTTAAGATTCACATGTT+TGG + Chr8:83296813-83296832 MsG0880047208.01.T01:intron 20.0%
! AAATGAGTGATTGTATTACA+TGG - Chr8:83296182-83296201 None:intergenic 25.0%
! AAGAATCCTCAAATAATTCA+TGG + Chr8:83298431-83298450 MsG0880047208.01.T01:intron 25.0%
! AAGTTGCTGTAATCTATTAA+GGG - Chr8:83294748-83294767 None:intergenic 25.0%
! AATAGATGCATTTAATCCTT+TGG - Chr8:83296605-83296624 None:intergenic 25.0%
! AATGCAAGATTTATCAAGTT+TGG - Chr8:83295951-83295970 None:intergenic 25.0%
! AATTGCATTACTATAAGAGT+TGG - Chr8:83296757-83296776 None:intergenic 25.0%
! AGTTAGGTTTGATTATTTGT+TGG + Chr8:83294854-83294873 MsG0880047208.01.T01:intron 25.0%
! ATAAAAAATATTACCTCACG+AGG - Chr8:83296513-83296532 None:intergenic 25.0%
! ATAACACAAACAACATTATG+AGG + Chr8:83295768-83295787 MsG0880047208.01.T01:intron 25.0%
! ATGTTCTGTATCTGATAAAT+AGG - Chr8:83296132-83296151 None:intergenic 25.0%
! CTAATCCTAATTGAATATCA+TGG + Chr8:83294790-83294809 MsG0880047208.01.T01:intron 25.0%
! CTAGATTAAGAAAATAGTTC+AGG + Chr8:83298339-83298358 MsG0880047208.01.T01:intron 25.0%
! CTTGTATAAAAAAAAACCCA+GGG - Chr8:83298090-83298109 None:intergenic 25.0%
! CTTTGTCTTATAAATAAGAC+CGG + Chr8:83297855-83297874 MsG0880047208.01.T01:intron 25.0%
! GAAAACCATGATATTCAATT+AGG - Chr8:83294798-83294817 None:intergenic 25.0%
! GTTCTTATAAATTCGTATCA+GGG - Chr8:83297744-83297763 None:intergenic 25.0%
! TAAAAAATATTACCTCACGA+GGG - Chr8:83296512-83296531 None:intergenic 25.0%
! TAACTAAAGATTCTTGAAAG+CGG - Chr8:83295235-83295254 None:intergenic 25.0%
! TAATGTTGTGTTATGAAAGT+TGG - Chr8:83295904-83295923 None:intergenic 25.0%
! TATTAATGTCCCTAAATTCA+AGG - Chr8:83298233-83298252 None:intergenic 25.0%
! TGAAAACAAGCTGTTAATTA+TGG + Chr8:83293005-83293024 MsG0880047208.01.T02:intron 25.0%
! TGTTCTTATAAATTCGTATC+AGG - Chr8:83297745-83297764 None:intergenic 25.0%
! TTGTTTGTGTCATAAAAAGT+TGG - Chr8:83295600-83295619 None:intergenic 25.0%
! TTGTTTGTGTTATGAAAAGT+TGG - Chr8:83295761-83295780 None:intergenic 25.0%
! TTTAACATTGGAAAAGCAAT+TGG + Chr8:83294481-83294500 MsG0880047208.01.T01:intron 25.0%
! TTTATAAGTAGAGACAAATC+TGG - Chr8:83292832-83292851 None:intergenic 25.0%
! TTTCATAACACAACATTATG+AGG + Chr8:83295906-83295925 MsG0880047208.01.T01:intron 25.0%
!! CGAAACAAAATCTAAAATTC+AGG - Chr8:83296561-83296580 None:intergenic 25.0%
!! TTGATGGTAAAAGTCTAAAA+GGG - Chr8:83292234-83292253 None:intergenic 25.0%
!! TTTGATGGTAAAAGTCTAAA+AGG - Chr8:83292235-83292254 None:intergenic 25.0%
!!! AAACAATTAAGGCTTTGTTT+GGG + Chr8:83293467-83293486 MsG0880047208.01.T02:intron 25.0%
!!! AGATAGTTTAGTTTTTGTCT+CGG + Chr8:83293367-83293386 MsG0880047208.01.T02:intron 25.0%
!!! CTCATTTGTCTTTTTTTTCA+TGG + Chr8:83296195-83296214 MsG0880047208.01.T01:intron 25.0%
!!! GATATACTTACTTGTTTTCA+TGG - Chr8:83297111-83297130 None:intergenic 25.0%
!!! GATTAGATTAGGTATTGAAA+AGG + Chr8:83292518-83292537 MsG0880047208.01.T02:intron 25.0%
!!! GGTTATTTTGGTAATGAATA+AGG + Chr8:83293389-83293408 MsG0880047208.01.T02:intron 25.0%
!!! GTTGGTTTGTTATGAAAAAT+TGG - Chr8:83296072-83296091 None:intergenic 25.0%
!!! TAAACAATTAAGGCTTTGTT+TGG + Chr8:83293466-83293485 MsG0880047208.01.T02:intron 25.0%
!!! TTAACAGCTTGTTTTCAATA+CGG - Chr8:83293002-83293021 None:intergenic 25.0%
!!! TTGTTTTGCTTCTTTAACAT+TGG + Chr8:83294469-83294488 MsG0880047208.01.T01:intron 25.0%
!!! TTTTTACTAGCTTAAGCTTA+TGG + Chr8:83296940-83296959 MsG0880047208.01.T01:intron 25.0%
AAAAAAAAGAGTAGGTGTCT+TGG + Chr8:83297242-83297261 MsG0880047208.01.T01:intron 30.0%
AAAAAATATTACCTCACGAG+GGG - Chr8:83296511-83296530 None:intergenic 30.0%
AAACAACATTATGAGGTTGT+AGG + Chr8:83295775-83295794 MsG0880047208.01.T01:intron 30.0%
AAAGACAATGAGAACTAGTT+TGG - Chr8:83292184-83292203 None:intergenic 30.0%
AACTAGAAGATTCTTGAAAC+TGG - Chr8:83295573-83295592 None:intergenic 30.0%
AAGCAAAAAGAGAAAAGGAT+TGG - Chr8:83294047-83294066 None:intergenic 30.0%
AATTCTTGAGATGCTAAAGA+GGG - Chr8:83297202-83297221 None:intergenic 30.0%
AGAAATCTTCCTAGTTTCAA+AGG + Chr8:83297519-83297538 MsG0880047208.01.T01:intron 30.0%
AGAAGAACACAATCAAAAAC+AGG - Chr8:83292430-83292449 None:intergenic 30.0%
AGAAGAAGCAAAAAGAGAAA+AGG - Chr8:83294052-83294071 None:intergenic 30.0%
ATAAATTGTAATCAGATCCC+TGG + Chr8:83298070-83298089 MsG0880047208.01.T01:intron 30.0%
CAAGTTGCTGTAATCTATTA+AGG - Chr8:83294749-83294768 None:intergenic 30.0%
CAGTCTTTGTTGAAATCAAT+GGG + Chr8:83296306-83296325 MsG0880047208.01.T01:CDS 30.0%
CATTCAACATATCATCTTTC+AGG - Chr8:83298501-83298520 None:intergenic 30.0%
CTTGATCATAATGTCAGAAA+CGG + Chr8:83295080-83295099 MsG0880047208.01.T01:intron 30.0%
GAAGATTTCTTCTAGTAAGA+TGG - Chr8:83297509-83297528 None:intergenic 30.0%
GACATTATGATCAAGATGAA+TGG - Chr8:83295075-83295094 None:intergenic 30.0%
GCTTATTTGAGCTTATCTAT+TGG - Chr8:83294329-83294348 None:intergenic 30.0%
GCTTGTATAAAAAAAAACCC+AGG - Chr8:83298091-83298110 None:intergenic 30.0%
GTAAGAAGAGGAAAATGTTA+GGG - Chr8:83293886-83293905 None:intergenic 30.0%
GTAGTTCCATGAATTATTTG+AGG - Chr8:83298440-83298459 None:intergenic 30.0%
GTCAAAATGTAGTCAAATAG+TGG - Chr8:83293090-83293109 None:intergenic 30.0%
GTGAGAAATATAGAGGAAAA+TGG + Chr8:83293525-83293544 MsG0880047208.01.T02:intron 30.0%
TAAATCAGTAACACTACCAT+AGG + Chr8:83293442-83293461 MsG0880047208.01.T02:intron 30.0%
TAAATTGTAATCAGATCCCT+GGG + Chr8:83298071-83298090 MsG0880047208.01.T01:intron 30.0%
TACCATAGGCTAAACAATTA+AGG + Chr8:83293456-83293475 MsG0880047208.01.T02:intron 30.0%
TAGAATAAAGAGTCTTTGAC+CGG - Chr8:83297053-83297072 None:intergenic 30.0%
TAGAGAAAGATAGATGGAAT+AGG - Chr8:83294019-83294038 None:intergenic 30.0%
TATGAAAAGTTGGACATAAC+TGG - Chr8:83295751-83295770 None:intergenic 30.0%
TATGACACAAACAACATATG+AGG + Chr8:83295606-83295625 MsG0880047208.01.T01:intron 30.0%
TGTAAGAAGAGGAAAATGTT+AGG - Chr8:83293887-83293906 None:intergenic 30.0%
TTTCCTGTTCAAATACATAG+CGG - Chr8:83293808-83293827 None:intergenic 30.0%
TTTGCAAATGGGCAATTTAT+GGG - Chr8:83297311-83297330 None:intergenic 30.0%
! AATAGGACGACAAGAATTTT+AGG - Chr8:83296115-83296134 None:intergenic 30.0%
! AGAAAAAGAGCATATGGTAT+TGG - Chr8:83297985-83298004 None:intergenic 30.0%
! CTATTTTCTCTCTTGATCAA+TGG - Chr8:83294993-83295012 None:intergenic 30.0%
! GAAAAAGAGCATATGGTATT+GGG - Chr8:83297984-83298003 None:intergenic 30.0%
! GCTCACTACAAACTATTTTA+AGG - Chr8:83298209-83298228 None:intergenic 30.0%
! TATCTTCTTTCCTTTTCTGT+TGG + Chr8:83296713-83296732 MsG0880047208.01.T01:intron 30.0%
! TATTTTCTTAATCTAGTCCC+TGG - Chr8:83298335-83298354 None:intergenic 30.0%
! TTTTGCAAATGGGCAATTTA+TGG - Chr8:83297312-83297331 None:intergenic 30.0%
!! ATGTCATAAGCTGTTTTCAT+AGG + Chr8:83294273-83294292 MsG0880047208.01.T01:intron 30.0%
!! CTTCAGGTTTAATATTTTGC+AGG + Chr8:83298003-83298022 MsG0880047208.01.T01:intron 30.0%
!! GGATTTGAAATCAATCCTTT+TGG - Chr8:83298801-83298820 None:intergenic 30.0%
!! TAACAGCTTGTTTTCAATAC+GGG - Chr8:83293001-83293020 None:intergenic 30.0%
!! TACTCTAGCTTTAGAGTTAT+AGG + Chr8:83297432-83297451 MsG0880047208.01.T01:intron 30.0%
!!! AGTTTTGAGTCATTTGTTCA+AGG + Chr8:83294169-83294188 MsG0880047208.01.T01:intron 30.0%
!!! GATAGTTTAGTTTTTGTCTC+GGG + Chr8:83293368-83293387 MsG0880047208.01.T02:intron 30.0%
!!! GTTTTTTGTGTTAAGAAAGG+TGG - Chr8:83295433-83295452 None:intergenic 30.0%
AAAAATATTACCTCACGAGG+GGG - Chr8:83296510-83296529 None:intergenic 35.0%
AACACGCAAGATTTCATGTT+CGG - Chr8:83295813-83295832 None:intergenic 35.0%
AAGAATAACCTGTGTAGCTA+CGG - Chr8:83297678-83297697 None:intergenic 35.0%
AAGCAATTGGAGAACCATTT+AGG + Chr8:83294494-83294513 MsG0880047208.01.T01:intron 35.0%
AATAAAGCCTCAGTGACATA+TGG - Chr8:83298823-83298842 None:intergenic 35.0%
AATCAGAAACATGCAGAAGA+AGG - Chr8:83295527-83295546 None:intergenic 35.0%
ACAAATTGTAACAACTACGC+AGG - Chr8:83296636-83296655 None:intergenic 35.0%
ACACAACATTATGAGGTTGT+AGG + Chr8:83295913-83295932 MsG0880047208.01.T01:intron 35.0%
ACATCATCAACATCAATTGC+AGG - Chr8:83296441-83296460 None:intergenic 35.0%
ACTTGATGTATCCTTGTGAA+AGG + Chr8:83294943-83294962 MsG0880047208.01.T01:intron 35.0%
AGAACACAATCAAAAACAGG+AGG - Chr8:83292427-83292446 None:intergenic 35.0%
AGATGCATTTAATCCTTTGG+TGG - Chr8:83296602-83296621 None:intergenic 35.0%
AGCCTTAATTGTTTAGCCTA+TGG - Chr8:83293461-83293480 None:intergenic 35.0%
AGGAACTAAGAAGATTGAGA+GGG - Chr8:83292407-83292426 None:intergenic 35.0%
AGGACCGCTGTTAAAAAAAA+AGG - Chr8:83298182-83298201 None:intergenic 35.0%
AGTTCGCAATTCCAAACAAA+AGG + Chr8:83298647-83298666 MsG0880047208.01.T01:CDS 35.0%
ATAAAGCCTCAGTGACATAT+GGG - Chr8:83298822-83298841 None:intergenic 35.0%
ATACTAAAATGTACTCCCTC+CGG + Chr8:83297031-83297050 MsG0880047208.01.T01:intron 35.0%
ATCAGAAACATGCAGAAGAA+GGG - Chr8:83295526-83295545 None:intergenic 35.0%
ATGTAGCAAATCCATCTAGT+GGG + Chr8:83294419-83294438 MsG0880047208.01.T01:intron 35.0%
ATTCAACATCGAAGTGATTC+CGG + Chr8:83292136-83292155 MsG0880047208.01.T02:five_prime_UTR 35.0%
ATTTAGGTCCTGTTTGGTAT+GGG + Chr8:83294510-83294529 MsG0880047208.01.T01:intron 35.0%
ATTTCTTCTAGTAAGATGGC+AGG - Chr8:83297505-83297524 None:intergenic 35.0%
CAAAAAGAGAAAAGGATTGG+AGG - Chr8:83294044-83294063 None:intergenic 35.0%
CAAACAACATATGAGGTTGT+AGG + Chr8:83295613-83295632 MsG0880047208.01.T01:intron 35.0%
CAAACACAGACAAAGTGAAT+TGG - Chr8:83292353-83292372 None:intergenic 35.0%
CACTTCGATGTTGAATGTTA+TGG - Chr8:83292132-83292151 None:intergenic 35.0%
CCTAACTAATTAACTAACCC+AGG - Chr8:83294841-83294860 None:intergenic 35.0%
CCTGTAAAACTACTGTACAT+TGG + Chr8:83293416-83293435 MsG0880047208.01.T02:intron 35.0%
GAATTCTTGAGATGCTAAAG+AGG - Chr8:83297203-83297222 None:intergenic 35.0%
GAGGAATAGAGAAAGATAGA+TGG - Chr8:83294025-83294044 None:intergenic 35.0%
GATCAAGAGAGAAAATAGAG+TGG + Chr8:83294995-83295014 MsG0880047208.01.T01:intron 35.0%
GATGCATTTAATCCTTTGGT+GGG - Chr8:83296601-83296620 None:intergenic 35.0%
GCAGTCTTTGTTGAAATCAA+TGG + Chr8:83296305-83296324 MsG0880047208.01.T01:CDS 35.0%
GGTCAAAGACTCTTTATTCT+AGG + Chr8:83297052-83297071 MsG0880047208.01.T01:intron 35.0%
GGTCTCTTGCAAAGAATATA+GGG + Chr8:83297581-83297600 MsG0880047208.01.T01:intron 35.0%
GTCTTATAAATAAGACCGGA+GGG + Chr8:83297859-83297878 MsG0880047208.01.T01:intron 35.0%
GTTGAATGTAATTGCGTTTC+AGG + Chr8:83298513-83298532 MsG0880047208.01.T01:intron 35.0%
TAAACAAGTTCCTTGAGCTA+TGG + Chr8:83296355-83296374 MsG0880047208.01.T01:CDS 35.0%
TAGTGAGCTCCTTGAATTTA+GGG + Chr8:83298221-83298240 MsG0880047208.01.T01:intron 35.0%
TATTGAAAAGGAACGCACTT+GGG + Chr8:83292530-83292549 MsG0880047208.01.T02:intron 35.0%
TGAGCTGGTAACTAACAAAA+TGG - Chr8:83297914-83297933 None:intergenic 35.0%
TGGACTTTAACCTCTTAACT+CGG - Chr8:83293151-83293170 None:intergenic 35.0%
TGGTCTCTTGCAAAGAATAT+AGG + Chr8:83297580-83297599 MsG0880047208.01.T01:intron 35.0%
TGTCTTATAAATAAGACCGG+AGG + Chr8:83297858-83297877 MsG0880047208.01.T01:intron 35.0%
TGTTGTGTTGTGTTTGAACT+TGG + Chr8:83292322-83292341 MsG0880047208.01.T02:five_prime_UTR 35.0%
TTCTACCATTATTTGCCACT+CGG - Chr8:83293727-83293746 None:intergenic 35.0%
TTGCTTGGCAACATTTGATT+GGG + Chr8:83292945-83292964 MsG0880047208.01.T02:intron 35.0%
TTGTTTATCCCATACCAAAC+AGG - Chr8:83294521-83294540 None:intergenic 35.0%
TTTGTTGAAATCAATGGGTG+TGG + Chr8:83296311-83296330 MsG0880047208.01.T01:CDS 35.0%
! AATCAATCCTTTTGGCGTTT+AGG - Chr8:83298793-83298812 None:intergenic 35.0%
! ACCATATGCTCTTTTTCTTC+AGG + Chr8:83297987-83298006 MsG0880047208.01.T01:intron 35.0%
! ACCTGAAGAAAAAGAGCATA+TGG - Chr8:83297991-83298010 None:intergenic 35.0%
! CAATTGGCACAAGATTTTCT+AGG - Chr8:83295045-83295064 None:intergenic 35.0%
! GTTTTTGTCTCGGGTTATTT+TGG + Chr8:83293377-83293396 MsG0880047208.01.T02:intron 35.0%
!! AGATTATGAAATTGACTCGC+CGG - Chr8:83292158-83292177 None:intergenic 35.0%
!! ATTTTGACACTGAGCTAAGT+GGG + Chr8:83293102-83293121 MsG0880047208.01.T02:intron 35.0%
!! CCAATGTACAGTAGTTTTAC+AGG - Chr8:83293419-83293438 None:intergenic 35.0%
!! CCTGGGTTAGTTAATTAGTT+AGG + Chr8:83294838-83294857 MsG0880047208.01.T01:intron 35.0%
!! GTATATCTAAAGTGCGCTTT+TGG - Chr8:83297405-83297424 None:intergenic 35.0%
!! TCTTTGTTGTTGTTGTTGCT+TGG + Chr8:83292930-83292949 MsG0880047208.01.T02:intron 35.0%
!! TTTTGTTTGGAATTGCGAAC+TGG - Chr8:83298648-83298667 None:intergenic 35.0%
!!! AAACTGTTTTGAGGGCATTT+TGG + Chr8:83293846-83293865 MsG0880047208.01.T01:five_prime_UTR 35.0%
!!! AACTGTTTTGAGGGCATTTT+GGG + Chr8:83293847-83293866 MsG0880047208.01.T01:five_prime_UTR 35.0%
!!! TGGTCGTGAACTGTTTTTTT+GGG - Chr8:83292276-83292295 None:intergenic 35.0%
AAAGCTAGAGCCAACAGAAA+AGG - Chr8:83296726-83296745 None:intergenic 40.0%
AATAAAGAGTCTTTGACCGG+AGG - Chr8:83297050-83297069 None:intergenic 40.0%
AATCGAATGCTCAACACAAC+AGG + Chr8:83297147-83297166 MsG0880047208.01.T01:intron 40.0%
AATGATATAGGGCCTTGGAT+TGG - Chr8:83294351-83294370 None:intergenic 40.0%
ACAACACAACACAACACACA+AGG - Chr8:83292313-83292332 None:intergenic 40.0%
ACGCAGCAGTATTACTGATA+CGG + Chr8:83293062-83293081 MsG0880047208.01.T02:intron 40.0%
AGAAAATAGAGTGGTGAGTG+GGG + Chr8:83295004-83295023 MsG0880047208.01.T01:intron 40.0%
AGAACCATTTAGGTCCTGTT+TGG + Chr8:83294504-83294523 MsG0880047208.01.T01:intron 40.0%
AGAGAAAATAGAGTGGTGAG+TGG + Chr8:83295002-83295021 MsG0880047208.01.T01:intron 40.0%
AGCAATCAATGTGTCCTGAT+CGG - Chr8:83298617-83298636 None:intergenic 40.0%
AGCTCAAATAAGCCAATCCA+AGG + Chr8:83294336-83294355 MsG0880047208.01.T01:intron 40.0%
AGTGAGAAGAGAGAAAGAGT+TGG - Chr8:83293919-83293938 None:intergenic 40.0%
ATAAAGAGTCTTTGACCGGA+GGG - Chr8:83297049-83297068 None:intergenic 40.0%
ATAACCTGAACAGAGGAAGA+CGG - Chr8:83293993-83294012 None:intergenic 40.0%
ATCATCAACAAACCCACCAA+AGG + Chr8:83296586-83296605 MsG0880047208.01.T01:intron 40.0%
ATTGGGAACTTCTTCATCCT+CGG - Chr8:83298695-83298714 None:intergenic 40.0%
ATTGGGTTACATGACACACA+AGG - Chr8:83297967-83297986 None:intergenic 40.0%
CAAATCCATCTAGTGGGAAA+AGG + Chr8:83294425-83294444 MsG0880047208.01.T01:intron 40.0%
CACTCTTCTATCCTTTCACA+AGG - Chr8:83294957-83294976 None:intergenic 40.0%
CATACCAAACAGGACCTAAA+TGG - Chr8:83294511-83294530 None:intergenic 40.0%
CATGTAGCAAATCCATCTAG+TGG + Chr8:83294418-83294437 MsG0880047208.01.T01:intron 40.0%
CATTTAGGTCCTGTTTGGTA+TGG + Chr8:83294509-83294528 MsG0880047208.01.T01:intron 40.0%
CTCTTGCAAAGAATATAGGG+AGG + Chr8:83297584-83297603 MsG0880047208.01.T01:intron 40.0%
GAGAAAATAGAGTGGTGAGT+GGG + Chr8:83295003-83295022 MsG0880047208.01.T01:intron 40.0%
GAGAAGAGAGAAAGGATGTT+AGG - Chr8:83293954-83293973 None:intergenic 40.0%
GAGGAACTAAGAAGATTGAG+AGG - Chr8:83292408-83292427 None:intergenic 40.0%
GAGTTAAGAGGTTAAAGTCC+AGG + Chr8:83293150-83293169 MsG0880047208.01.T02:intron 40.0%
GATCAGTGGGATAACTTCTA+TGG + Chr8:83296236-83296255 MsG0880047208.01.T01:intron 40.0%
GATCCGCTATGTATTTGAAC+AGG + Chr8:83293802-83293821 MsG0880047208.01.T01:five_prime_UTR 40.0%
GTAGTGAGCTCCTTGAATTT+AGG + Chr8:83298220-83298239 MsG0880047208.01.T01:intron 40.0%
GTATTGAAAAGGAACGCACT+TGG + Chr8:83292529-83292548 MsG0880047208.01.T02:intron 40.0%
GTTGCTTGGCAACATTTGAT+TGG + Chr8:83292944-83292963 MsG0880047208.01.T02:intron 40.0%
TAGGAACATAACCTGAACAG+AGG - Chr8:83294000-83294019 None:intergenic 40.0%
TAGTCAATAGCGCGATATAG+TGG + Chr8:83293696-83293715 MsG0880047208.01.T01:five_prime_UTR 40.0%
TCAAATCCCATATGTCACTG+AGG + Chr8:83298813-83298832 MsG0880047208.01.T01:three_prime_UTR 40.0%
TCACATGTTTGGACTGAGAT+TGG + Chr8:83296824-83296843 MsG0880047208.01.T01:intron 40.0%
TCAGTAATACTGCTGCGTAA+AGG - Chr8:83293060-83293079 None:intergenic 40.0%
TCATCCTCGGTTTCTTCTAT+AGG - Chr8:83298682-83298701 None:intergenic 40.0%
TCTCCGAAACAGTCTCAAAA+AGG + Chr8:83294297-83294316 MsG0880047208.01.T01:intron 40.0%
TCTGTCTTCTCTTCTTGAGA+CGG - Chr8:83298730-83298749 None:intergenic 40.0%
TGCTTGGCAACATTTGATTG+GGG + Chr8:83292946-83292965 MsG0880047208.01.T02:intron 40.0%
TGGGTGTAGTAAAACGATGT+TGG - Chr8:83296090-83296109 None:intergenic 40.0%
TGTCTAATGATATAGGGCCT+TGG - Chr8:83294356-83294375 None:intergenic 40.0%
TTCTTTCTCCTGCATGTTTC+TGG + Chr8:83295696-83295715 MsG0880047208.01.T01:intron 40.0%
TTGAGCTTATCTATTGGCGT+AGG - Chr8:83294323-83294342 None:intergenic 40.0%
TTTCTAATCTCTACTCCCTC+CGG - Chr8:83297877-83297896 None:intergenic 40.0%
TTTCTCTCTTCTCACTGCAT+CGG + Chr8:83293961-83293980 MsG0880047208.01.T01:five_prime_UTR 40.0%
! AAACTGGTTGCGATTTTGGA+TGG - Chr8:83292712-83292731 None:intergenic 40.0%
! AACAACCTTTTCCCACTAGA+TGG - Chr8:83294433-83294452 None:intergenic 40.0%
! AACTTCTATGGCTGATAACG+AGG + Chr8:83296248-83296267 MsG0880047208.01.T01:intron 40.0%
! ACAAGGTATCCTTCTGATTC+TGG - Chr8:83292296-83292315 None:intergenic 40.0%
! AGCATGCTCTGAATACACTT+GGG - Chr8:83296412-83296431 None:intergenic 40.0%
! AGGAACTTGTTTATCACACG+AGG - Chr8:83296348-83296367 None:intergenic 40.0%
! ATGCCTAGTGCTTTTGCAAA+TGG - Chr8:83297323-83297342 None:intergenic 40.0%
! GAAGAAACTGGTTGCGATTT+TGG - Chr8:83292716-83292735 None:intergenic 40.0%
! GGTTTTCATTTCCAATCTCC+TGG + Chr8:83294811-83294830 MsG0880047208.01.T01:intron 40.0%
! TGCCTAGTGCTTTTGCAAAT+GGG - Chr8:83297322-83297341 None:intergenic 40.0%
! TTTAGAGTTATAGGCTGCGA+CGG + Chr8:83297441-83297460 MsG0880047208.01.T01:intron 40.0%
!! ACAAAGGCACCTTTGAAACT+AGG - Chr8:83297531-83297550 None:intergenic 40.0%
!! CATTTTGACACTGAGCTAAG+TGG + Chr8:83293101-83293120 MsG0880047208.01.T02:intron 40.0%
!! GTCACTGAGGCTTTATTAGT+AGG + Chr8:83298826-83298845 MsG0880047208.01.T01:three_prime_UTR 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + Chr8:83293474-83293493 MsG0880047208.01.T02:intron 40.0%
!! TGGCACAAGATTTTCTAGGA+AGG - Chr8:83295041-83295060 None:intergenic 40.0%
!! TTCTGGTTTGCTAGTTAGAC+TGG + Chr8:83295713-83295732 MsG0880047208.01.T01:intron 40.0%
!! TTGGTGGGTTTGTTGATGAT+TGG - Chr8:83296586-83296605 None:intergenic 40.0%
!!! ACTGTTTTGAGGGCATTTTG+GGG + Chr8:83293848-83293867 MsG0880047208.01.T01:five_prime_UTR 40.0%
!!! AGGCCTTTTTGAGACTGTTT+CGG - Chr8:83294303-83294322 None:intergenic 40.0%
!!! CTGGTCGTGAACTGTTTTTT+TGG - Chr8:83292277-83292296 None:intergenic 40.0%
!!! GGTCGTGAACTGTTTTTTTG+GGG - Chr8:83292275-83292294 None:intergenic 40.0%
AATAGCAACGAATCACCAGC+AGG - Chr8:83298898-83298917 None:intergenic 45.0%
AGAGACAAATCTGGCAGTGA+TGG - Chr8:83292823-83292842 None:intergenic 45.0%
AGGAAGACTCGAATATGCCA+AGG + Chr8:83296268-83296287 MsG0880047208.01.T01:CDS 45.0%
AGTTCACGACCAGAATCAGA+AGG + Chr8:83292284-83292303 MsG0880047208.01.T02:five_prime_UTR 45.0%
ATAGCAACGAATCACCAGCA+GGG - Chr8:83298897-83298916 None:intergenic 45.0%
ATCGACACAAGCTTCAACCA+CGG + Chr8:83292378-83292397 MsG0880047208.01.T02:five_prime_UTR 45.0%
ATGAGCACAGCACCTATGTA+TGG - Chr8:83297616-83297635 None:intergenic 45.0%
ATGTCAGAAACGGCTCAACA+AGG + Chr8:83295090-83295109 MsG0880047208.01.T01:intron 45.0%
CAAGTGTATTCAGAGCATGC+TGG + Chr8:83296411-83296430 MsG0880047208.01.T01:CDS 45.0%
CAGGATGTACCTTATCCCTT+TGG + Chr8:83297166-83297185 MsG0880047208.01.T01:intron 45.0%
CATAGCGATACCATAGCTCA+AGG - Chr8:83296368-83296387 None:intergenic 45.0%
CATTGACAGGACTTGAATCC+TGG - Chr8:83293171-83293190 None:intergenic 45.0%
CATTGCCGAAGTCTATAGCA+GGG + Chr8:83298572-83298591 MsG0880047208.01.T01:CDS 45.0%
CCAGCTCATGAGTTGTAATC+AGG + Chr8:83297926-83297945 MsG0880047208.01.T01:intron 45.0%
CCTGATTACAACTCATGAGC+TGG - Chr8:83297929-83297948 None:intergenic 45.0%
CGAACCTATAGAAGAAACCG+AGG + Chr8:83298675-83298694 MsG0880047208.01.T01:CDS 45.0%
CTAAAAGGGCAAGTTGTTGC+TGG - Chr8:83292220-83292239 None:intergenic 45.0%
CTAGCAAACCAGAAACATGC+AGG - Chr8:83295707-83295726 None:intergenic 45.0%
CTGTCTTCTCTTCTTGAGAC+GGG - Chr8:83298729-83298748 None:intergenic 45.0%
GAAGTTGACCTGGGATTGAA+TGG - Chr8:83296472-83296491 None:intergenic 45.0%
GATGAATGGAGCAGCACAAT+TGG - Chr8:83295061-83295080 None:intergenic 45.0%
GATGCAGTGAGAAGAGAGAA+AGG - Chr8:83293962-83293981 None:intergenic 45.0%
GATGGATGAGATTGAGCCAA+AGG - Chr8:83292582-83292601 None:intergenic 45.0%
GCAACATTTGATTGGGGCAA+AGG + Chr8:83292952-83292971 MsG0880047208.01.T02:intron 45.0%
GCAATCAATGTGTCCTGATC+GGG - Chr8:83298616-83298635 None:intergenic 45.0%
GGAAAGGACACTCTTTGATG+GGG - Chr8:83298766-83298785 None:intergenic 45.0%
GGAAGACTCGAATATGCCAA+GGG + Chr8:83296269-83296288 MsG0880047208.01.T01:CDS 45.0%
GGAATTGCGAACTGGTAGTT+GGG - Chr8:83298640-83298659 None:intergenic 45.0%
GGGAAAGGACACTCTTTGAT+GGG - Chr8:83298767-83298786 None:intergenic 45.0%
TAAGCTTGCCATTCAATCCC+AGG + Chr8:83296461-83296480 MsG0880047208.01.T01:CDS 45.0%
TCGGCAATGGTATCTTGTTG+CGG - Chr8:83298561-83298580 None:intergenic 45.0%
TGAGCACAGCACCTATGTAT+GGG - Chr8:83297615-83297634 None:intergenic 45.0%
TGAGCTATGGTATCGCTATG+TGG + Chr8:83296368-83296387 MsG0880047208.01.T01:CDS 45.0%
TGCACAATCTTTGCATCCCT+TGG - Chr8:83296288-83296307 None:intergenic 45.0%
TGGAATTGCGAACTGGTAGT+TGG - Chr8:83298641-83298660 None:intergenic 45.0%
TTAACTAACCCAGGAGAACC+AGG - Chr8:83294832-83294851 None:intergenic 45.0%
TTGAGATGCTAAAGAGGGAC+TGG - Chr8:83297197-83297216 None:intergenic 45.0%
TTGGGGGGTGAGAAATATAG+AGG + Chr8:83293518-83293537 MsG0880047208.01.T02:intron 45.0%
! AATCCTTTTGGCGTTTAGGC+AGG - Chr8:83298789-83298808 None:intergenic 45.0%
! ATCCTTTTGGCGTTTAGGCA+GGG - Chr8:83298788-83298807 None:intergenic 45.0%
! ATCTGGCAGTGATGGAAGAT+CGG - Chr8:83292815-83292834 None:intergenic 45.0%
! CAGCATGCTCTGAATACACT+TGG - Chr8:83296413-83296432 None:intergenic 45.0%
! GGTTCGACAGACCTTTTGTT+TGG - Chr8:83298661-83298680 None:intergenic 45.0%
! TATCGCGCTATTGACTACTC+TGG - Chr8:83293693-83293712 None:intergenic 45.0%
! TTCTCTTCTTGAGACGGGTT+GGG - Chr8:83298724-83298743 None:intergenic 45.0%
!! GAGGCTTTATTAGTAGGCGA+TGG + Chr8:83298832-83298851 MsG0880047208.01.T01:three_prime_UTR 45.0%
!! GCAAAAGCACTAGGCATAGA+AGG + Chr8:83297326-83297345 MsG0880047208.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr8:83293478-83293497 MsG0880047208.01.T02:intron 45.0%
!! GTTTCAGGTGCTTCTAGAAC+TGG + Chr8:83298528-83298547 MsG0880047208.01.T01:intron 45.0%
!! TCAAAGGTGCCTTTGTAGCA+AGG + Chr8:83297535-83297554 MsG0880047208.01.T01:intron 45.0%
!! TCTGTTGGCTCTAGCTTTCT+TGG + Chr8:83296728-83296747 MsG0880047208.01.T01:intron 45.0%
!! TGCCCATTTGCAAAAGCACT+AGG + Chr8:83297317-83297336 MsG0880047208.01.T01:intron 45.0%
!!! AAATTATTTTAAGTTTAAAA+GGG + Chr8:83298284-83298303 MsG0880047208.01.T01:intron 5.0%
!!! ACAAATTATTTAAAATTTTA+GGG + Chr8:83298252-83298271 MsG0880047208.01.T01:intron 5.0%
!!! TACAAATTATTTAAAATTTT+AGG + Chr8:83298251-83298270 MsG0880047208.01.T01:intron 5.0%
AATATTACCTCACGAGGGGG+TGG - Chr8:83296507-83296526 None:intergenic 50.0%
AGTGATTGCAGTGGGATCAG+TGG + Chr8:83296222-83296241 MsG0880047208.01.T01:intron 50.0%
ATCAATGTGTCCTGATCGGG+TGG - Chr8:83298613-83298632 None:intergenic 50.0%
ATGCCGCAAAAGTTCAGGGA+CGG + Chr8:83297652-83297671 MsG0880047208.01.T01:intron 50.0%
ATGCTAAAGAGGGACTGGAC+TGG - Chr8:83297192-83297211 None:intergenic 50.0%
ATGGCAGGCAAAGTCTAGCA+GGG - Chr8:83297490-83297509 None:intergenic 50.0%
ATGGGTGCAGTGATTGCAGT+GGG + Chr8:83296214-83296233 MsG0880047208.01.T01:intron 50.0%
ATTTCCACTTCCACCCGATC+AGG + Chr8:83298600-83298619 MsG0880047208.01.T01:CDS 50.0%
CATTTGATTGGGGCAAAGGC+AGG + Chr8:83292956-83292975 MsG0880047208.01.T02:intron 50.0%
CCATTGCCGAAGTCTATAGC+AGG + Chr8:83298571-83298590 MsG0880047208.01.T01:CDS 50.0%
CCTGCTATAGACTTCGGCAA+TGG - Chr8:83298574-83298593 None:intergenic 50.0%
CGAGAAGCTGAAGTTGACCT+GGG - Chr8:83296481-83296500 None:intergenic 50.0%
CGTATCAGGGCTTCTGTTTG+TGG - Chr8:83297731-83297750 None:intergenic 50.0%
CTTCTCTTCTTGAGACGGGT+TGG - Chr8:83298725-83298744 None:intergenic 50.0%
GACGGTGGAAGTAGAGGTTT+AGG + Chr8:83297459-83297478 MsG0880047208.01.T01:intron 50.0%
GATGCTCCTCCTTGCTACAA+AGG - Chr8:83297547-83297566 None:intergenic 50.0%
GGCAATGCCGCAAAAGTTCA+GGG + Chr8:83297648-83297667 MsG0880047208.01.T01:intron 50.0%
GGGGAAAGGACACTCTTTGA+TGG - Chr8:83298768-83298787 None:intergenic 50.0%
GTGATTGCAGTGGGATCAGT+GGG + Chr8:83296223-83296242 MsG0880047208.01.T01:intron 50.0%
TAGCAACGAATCACCAGCAG+GGG - Chr8:83298896-83298915 None:intergenic 50.0%
TCGACACAAGCTTCAACCAC+GGG + Chr8:83292379-83292398 MsG0880047208.01.T02:five_prime_UTR 50.0%
TGAGCGCACGATTGATCAGA+TGG - Chr8:83292600-83292619 None:intergenic 50.0%
TGTCGCCGAGTGGCAAATAA+TGG + Chr8:83293719-83293738 MsG0880047208.01.T01:five_prime_UTR 50.0%
TTTGGGAGTTTGGAGGGAAG+CGG + Chr8:83293484-83293503 MsG0880047208.01.T02:intron 50.0%
! AACTTTTGCGGCATTGCCCA+CGG - Chr8:83297646-83297665 None:intergenic 50.0%
! AAGGTGCCTTTGTAGCAAGG+AGG + Chr8:83297538-83297557 MsG0880047208.01.T01:intron 50.0%
! CACTTGGGTGACTTTTGAGC+GGG + Chr8:83292545-83292564 MsG0880047208.01.T02:intron 50.0%
! GCACTTGGGTGACTTTTGAG+CGG + Chr8:83292544-83292563 MsG0880047208.01.T02:intron 50.0%
! TCCAATCTCCTGGTTCTCCT+GGG + Chr8:83294821-83294840 MsG0880047208.01.T01:intron 50.0%
! TCCTTTTGGCGTTTAGGCAG+GGG - Chr8:83298787-83298806 None:intergenic 50.0%
! TTCCAATCTCCTGGTTCTCC+TGG + Chr8:83294820-83294839 MsG0880047208.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr8:83293477-83293496 MsG0880047208.01.T02:intron 50.0%
!! GGGAGGTATTGCCCATACAT+AGG + Chr8:83297601-83297620 MsG0880047208.01.T01:intron 50.0%
AAGCGGAAGGAAGGGCTTTG+GGG + Chr8:83293501-83293520 MsG0880047208.01.T02:intron 55.0%
ACCCAGGAGAACCAGGAGAT+TGG - Chr8:83294825-83294844 None:intergenic 55.0%
ACCTGAACAGAGGAAGACGG+CGG - Chr8:83293990-83294009 None:intergenic 55.0%
ACGGCGAACGGTGAAGAAAC+TGG - Chr8:83292728-83292747 None:intergenic 55.0%
AGACGTTAGTGCGTGGTCGA+TGG - Chr8:83292789-83292808 None:intergenic 55.0%
AGAGTTATAGGCTGCGACGG+TGG + Chr8:83297444-83297463 MsG0880047208.01.T01:intron 55.0%
CAAGTTGTTGCTGGCGCAAG+AGG - Chr8:83292211-83292230 None:intergenic 55.0%
CATGGGTGCAGTGATTGCAG+TGG + Chr8:83296213-83296232 MsG0880047208.01.T01:intron 55.0%
CCAGGCCCTGCTATAGACTT+CGG - Chr8:83298580-83298599 None:intergenic 55.0%
GAAGCGGAAGGAAGGGCTTT+GGG + Chr8:83293500-83293519 MsG0880047208.01.T02:intron 55.0%
GACGTTAGGGTTGACGACGA+CGG - Chr8:83292747-83292766 None:intergenic 55.0%
GATGGCAGGCAAAGTCTAGC+AGG - Chr8:83297491-83297510 None:intergenic 55.0%
GATGGCGTCAGTCACAACTC+CGG - Chr8:83292771-83292790 None:intergenic 55.0%
GCGAGAAGCTGAAGTTGACC+TGG - Chr8:83296482-83296501 None:intergenic 55.0%
GGCAGATCGCGTGTAAGAAG+AGG - Chr8:83293898-83293917 None:intergenic 55.0%
GGGCAATGCCGCAAAAGTTC+AGG + Chr8:83297647-83297666 MsG0880047208.01.T01:intron 55.0%
GGTCGCTAACCTGAACTGCT+CGG - Chr8:83293751-83293770 None:intergenic 55.0%
TCACAACTCCGGCGACGTTA+GGG - Chr8:83292760-83292779 None:intergenic 55.0%
TCCCCTGCCTAAACGCCAAA+AGG + Chr8:83298783-83298802 MsG0880047208.01.T01:CDS 55.0%
TCGGGTGGAAGTGGAAATCC+AGG - Chr8:83298598-83298617 None:intergenic 55.0%
TGGCAGGCAAAGTCTAGCAG+GGG - Chr8:83297489-83297508 None:intergenic 55.0%
TGGTAGAAGCCGAGCAGTTC+AGG + Chr8:83293739-83293758 MsG0880047208.01.T01:five_prime_UTR 55.0%
TTGGAGGGAAGCGGAAGGAA+GGG + Chr8:83293493-83293512 MsG0880047208.01.T02:intron 55.0%
TTGGCGTTTAGGCAGGGGAA+AGG - Chr8:83298782-83298801 None:intergenic 55.0%
TTTGGAGGGAAGCGGAAGGA+AGG + Chr8:83293492-83293511 MsG0880047208.01.T02:intron 55.0%
! CTGGGTTGAGCCGAGTTAAG+AGG + Chr8:83293138-83293157 MsG0880047208.01.T02:intron 55.0%
! GGGTGACTTTTGAGCGGGAA+AGG + Chr8:83292550-83292569 MsG0880047208.01.T02:intron 55.0%
! GTGGGTTGAGTAGCTCAGCT+GGG + Chr8:83293120-83293139 MsG0880047208.01.T02:intron 55.0%
!! AAGGAGGAGCATCGACTGTG+TGG + Chr8:83297554-83297573 MsG0880047208.01.T01:intron 55.0%
!! AGACGGGTTGGGATCAGCAT+TGG - Chr8:83298713-83298732 None:intergenic 55.0%
!! AGGAGGAGCATCGACTGTGT+GGG + Chr8:83297555-83297574 MsG0880047208.01.T01:intron 55.0%
!! AGTGGGTTGAGTAGCTCAGC+TGG + Chr8:83293119-83293138 MsG0880047208.01.T02:intron 55.0%
!! CTGGACTGGCCAAAGGGATA+AGG - Chr8:83297178-83297197 None:intergenic 55.0%
!! GAAGATTGAGAGGGTACCCG+TGG - Chr8:83292398-83292417 None:intergenic 55.0%
!! GACGGGTTGGGATCAGCATT+GGG - Chr8:83298712-83298731 None:intergenic 55.0%
!! GAGCATCGACTGTGTGGGAA+TGG + Chr8:83297560-83297579 MsG0880047208.01.T01:intron 55.0%
!! GATATAGTGGTGTCGCCGAG+TGG + Chr8:83293709-83293728 MsG0880047208.01.T01:five_prime_UTR 55.0%
AGCGACCACTCCAGCAGCAT+GGG + Chr8:83293764-83293783 MsG0880047208.01.T01:five_prime_UTR 60.0%
CCGAAGTCTATAGCAGGGCC+TGG + Chr8:83298577-83298596 MsG0880047208.01.T01:CDS 60.0%
GGAAGCGGAAGGAAGGGCTT+TGG + Chr8:83293499-83293518 MsG0880047208.01.T02:intron 60.0%
GGAGTTTGGAGGGAAGCGGA+AGG + Chr8:83293488-83293507 MsG0880047208.01.T02:intron 60.0%
GGGGCAAAGGCAGGTACCTT+TGG + Chr8:83292965-83292984 MsG0880047208.01.T02:intron 60.0%
GGTTCATCGATCACCCCTGC+TGG + Chr8:83298880-83298899 MsG0880047208.01.T01:three_prime_UTR 60.0%
GTCACAACTCCGGCGACGTT+AGG - Chr8:83292761-83292780 None:intergenic 60.0%
GTCGTCAACCCTAACGTCGC+CGG + Chr8:83292749-83292768 MsG0880047208.01.T02:intron 60.0%
GTGTCCTGATCGGGTGGAAG+TGG - Chr8:83298607-83298626 None:intergenic 60.0%
TACGGGCAGCACAGTGCCAA+AGG - Chr8:83292984-83293003 None:intergenic 60.0%
TAGCGACCACTCCAGCAGCA+TGG + Chr8:83293763-83293782 MsG0880047208.01.T01:five_prime_UTR 60.0%
TCGGCGAAGACGTTAGTGCG+TGG - Chr8:83292796-83292815 None:intergenic 60.0%
TGAACAGAGGAAGACGGCGG+CGG - Chr8:83293987-83294006 None:intergenic 60.0%
TGTGCTCATGCCCATGCCGT+GGG + Chr8:83297627-83297646 MsG0880047208.01.T01:intron 60.0%
! AGCGGAAGGAAGGGCTTTGG+GGG + Chr8:83293502-83293521 MsG0880047208.01.T02:intron 60.0%
! CGGCCGTCCCTGAACTTTTG+CGG - Chr8:83297658-83297677 None:intergenic 60.0%
! GCGGGAAAGGCATGTGCCTT+TGG + Chr8:83292563-83292582 MsG0880047208.01.T02:intron 60.0%
!! AGAGGGACTGGACTGGCCAA+AGG - Chr8:83297185-83297204 None:intergenic 60.0%
!! GAGGGACTGGACTGGCCAAA+GGG - Chr8:83297184-83297203 None:intergenic 60.0%
ACCACTCCAGCAGCATGGGC+GGG + Chr8:83293768-83293787 MsG0880047208.01.T01:five_prime_UTR 65.0%
AGGGACGGCCGTAGCTACAC+AGG + Chr8:83297667-83297686 MsG0880047208.01.T01:intron 65.0%
CTGTGCTCATGCCCATGCCG+TGG + Chr8:83297626-83297645 MsG0880047208.01.T01:intron 65.0%
GACCACTCCAGCAGCATGGG+CGG + Chr8:83293767-83293786 MsG0880047208.01.T01:five_prime_UTR 65.0%
GCCGCCGTCTTCCTCTGTTC+AGG + Chr8:83293986-83294005 MsG0880047208.01.T01:five_prime_UTR 65.0%
GGCTGCGACGGTGGAAGTAG+AGG + Chr8:83297453-83297472 MsG0880047208.01.T01:intron 65.0%
GGGTTGACGACGACGGCGAA+CGG - Chr8:83292740-83292759 None:intergenic 65.0%
TGCGGCATTGCCCACGGCAT+GGG - Chr8:83297640-83297659 None:intergenic 65.0%
TTGCGGCATTGCCCACGGCA+TGG - Chr8:83297641-83297660 None:intergenic 65.0%
!! GCGGAAGGAAGGGCTTTGGG+GGG + Chr8:83293503-83293522 MsG0880047208.01.T02:intron 65.0%
ACCCGCCCATGCTGCTGGAG+TGG - Chr8:83293772-83293791 None:intergenic 70.0%
CCAGCAGCATGGGCGGGTAG+CGG + Chr8:83293774-83293793 MsG0880047208.01.T01:five_prime_UTR 70.0%
CTCGCAACCACCCCCTCGTG+AGG + Chr8:83296497-83296516 MsG0880047208.01.T01:CDS 70.0%
CCGCTACCCGCCCATGCTGC+TGG - Chr8:83293777-83293796 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 83292116 83299026 83292116 ID=MsG0880047208.01;Name=MsG0880047208.01
Chr8 mRNA 83293639 83299026 83293639 ID=MsG0880047208.01.T01;Parent=MsG0880047208.01;Name=MsG0880047208.01.T01;_AED=0.42;_eAED=0.42;_QI=400|1|1|1|0.5|0.33|3|216|179
Chr8 exon 83293639 83294007 83293639 ID=MsG0880047208.01.T01:exon:35496;Parent=MsG0880047208.01.T01
Chr8 five_prime_UTR 83293639 83294007 83293639 ID=MsG0880047208.01.T01:five_prime_utr;Parent=MsG0880047208.01.T01
Chr8 five_prime_UTR 83296224 83296254 83296224 ID=MsG0880047208.01.T01:five_prime_utr;Parent=MsG0880047208.01.T01
Chr8 CDS 83296255 83296518 83296255 ID=MsG0880047208.01.T01:cds;Parent=MsG0880047208.01.T01
Chr8 CDS 83298535 83298810 83298535 ID=MsG0880047208.01.T01:cds;Parent=MsG0880047208.01.T01
Chr8 three_prime_UTR 83298811 83299026 83298811 ID=MsG0880047208.01.T01:three_prime_utr;Parent=MsG0880047208.01.T01
Chr8 mRNA 83292116 83299026 83292116 ID=MsG0880047208.01.T02;Parent=MsG0880047208.01;Name=MsG0880047208.01.T02;_AED=0.43;_eAED=0.43;_QI=316|1|1|1|0.5|0.33|3|216|179
Chr8 exon 83292116 83292400 83292116 ID=MsG0880047208.01.T02:exon:35499;Parent=MsG0880047208.01.T02
Chr8 five_prime_UTR 83292116 83292400 83292116 ID=MsG0880047208.01.T02:five_prime_utr;Parent=MsG0880047208.01.T02
Chr8 five_prime_UTR 83296224 83296254 83296224 ID=MsG0880047208.01.T02:five_prime_utr;Parent=MsG0880047208.01.T02
Chr8 CDS 83296255 83296518 83296255 ID=MsG0880047208.01.T02:cds;Parent=MsG0880047208.01.T02
Chr8 CDS 83298535 83298810 83298535 ID=MsG0880047208.01.T02:cds;Parent=MsG0880047208.01.T02
Chr8 three_prime_UTR 83298811 83299026 83298811 ID=MsG0880047208.01.T02:three_prime_utr;Parent=MsG0880047208.01.T02
Gene Sequence

>MsG0880047208.01.T01

ATGGCTGATAACGAGGAAGACTCGAATATGCCAAGGGATGCAAAGATTGTGCAGTCTTTGTTGAAATCAATGGGTGTGGAAGAATATGAACCTCGTGTGATAAACAAGTTCCTTGAGCTATGGTATCGCTATGTGGTTGATGTGTTAACAGATGCCCAAGTGTATTCAGAGCATGCTGGCAAGCCTGCAATTGATGTTGATGATGTTAAGCTTGCCATTCAATCCCAGGTCAACTTCAGCTTCTCGCAACCACCCCCTCGTGAGGTGCTTCTAGAACTGGCACAAAACCGCAACAAGATACCATTGCCGAAGTCTATAGCAGGGCCTGGATTTCCACTTCCACCCGATCAGGACACATTGATTGCTCCCAACTACCAGTTCGCAATTCCAAACAAAAGGTCTGTCGAACCTATAGAAGAAACCGAGGATGAAGAAGTTCCCAATGCTGATCCCAACCCGTCTCAAGAAGAGAAGACAGATGCGCAACAAAATCCCCATCAAAGAGTGTCCTTTCCCCTGCCTAAACGCCAAAAGGATTGA

>MsG0880047208.01.T02

ATGGCTGATAACGAGGAAGACTCGAATATGCCAAGGGATGCAAAGATTGTGCAGTCTTTGTTGAAATCAATGGGTGTGGAAGAATATGAACCTCGTGTGATAAACAAGTTCCTTGAGCTATGGTATCGCTATGTGGTTGATGTGTTAACAGATGCCCAAGTGTATTCAGAGCATGCTGGCAAGCCTGCAATTGATGTTGATGATGTTAAGCTTGCCATTCAATCCCAGGTCAACTTCAGCTTCTCGCAACCACCCCCTCGTGAGGTGCTTCTAGAACTGGCACAAAACCGCAACAAGATACCATTGCCGAAGTCTATAGCAGGGCCTGGATTTCCACTTCCACCCGATCAGGACACATTGATTGCTCCCAACTACCAGTTCGCAATTCCAAACAAAAGGTCTGTCGAACCTATAGAAGAAACCGAGGATGAAGAAGTTCCCAATGCTGATCCCAACCCGTCTCAAGAAGAGAAGACAGATGCGCAACAAAATCCCCATCAAAGAGTGTCCTTTCCCCTGCCTAAACGCCAAAAGGATTGA
Protein sequence

>MsG0880047208.01.T01

MADNEEDSNMPRDAKIVQSLLKSMGVEEYEPRVINKFLELWYRYVVDVLTDAQVYSEHAGKPAIDVDDVKLAIQSQVNFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLPPDQDTLIAPNYQFAIPNKRSVEPIEETEDEEVPNADPNPSQEEKTDAQQNPHQRVSFPLPKRQKD*

>MsG0880047208.01.T02

MADNEEDSNMPRDAKIVQSLLKSMGVEEYEPRVINKFLELWYRYVVDVLTDAQVYSEHAGKPAIDVDDVKLAIQSQVNFSFSQPPPREVLLELAQNRNKIPLPKSIAGPGFPLPPDQDTLIAPNYQFAIPNKRSVEPIEETEDEEVPNADPNPSQEEKTDAQQNPHQRVSFPLPKRQKD*