AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047507.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047507.01.T01 MTR_4g128800 94.231 260 12 2 44 303 1 257 0.0 509
MsG0880047507.01.T01 MTR_4g128800 94.231 260 12 2 44 303 1 257 0.0 509
MsG0880047507.01.T01 MTR_4g128800 94.231 260 12 2 44 303 1 257 0.0 505
MsG0880047507.01.T01 MTR_3g110530 53.160 269 112 6 41 303 23 283 6.91e-94 284
MsG0880047507.01.T01 MTR_1g040460 54.626 227 91 1 77 303 31 245 3.74e-81 249
MsG0880047507.01.T01 MTR_8g086260 50.000 232 106 2 75 303 88 312 2.06e-73 229
MsG0880047507.01.T01 MTR_8g086260 50.000 232 106 2 75 303 88 312 3.11e-73 228
MsG0880047507.01.T01 MTR_8g086260 48.707 232 109 2 75 303 88 312 2.25e-71 224
MsG0880047507.01.T01 MTR_8g086260 48.707 232 109 2 75 303 88 312 2.84e-70 223
MsG0880047507.01.T01 MTR_8g086260 48.707 232 109 2 75 303 88 312 1.56e-69 223
MsG0880047507.01.T01 MTR_8g086260 48.707 232 109 2 75 303 88 312 1.72e-69 223
MsG0880047507.01.T01 MTR_2g015960 46.725 229 117 2 75 303 21 244 2.26e-67 211
MsG0880047507.01.T01 MTR_2g015960 47.391 230 114 3 75 303 82 305 1.64e-66 211
MsG0880047507.01.T01 MTR_2g015960 46.725 229 117 2 75 303 82 305 2.20e-65 212
MsG0880047507.01.T01 MTR_6g005650 54.023 87 37 2 145 231 211 294 7.33e-23 96.3
MsG0880047507.01.T01 MTR_7g405800 51.724 87 39 2 145 231 144 227 8.88e-22 92.0
MsG0880047507.01.T02 MTR_4g128800 94.690 113 6 0 7 119 256 368 1.21e-74 226
MsG0880047507.01.T02 MTR_4g128800 91.489 94 8 0 5 98 254 347 1.05e-58 186
MsG0880047507.01.T02 MTR_3g110530 51.695 118 52 1 5 117 280 397 5.52e-35 124
MsG0880047507.01.T02 MTR_1g040460 49.107 112 55 2 7 118 244 353 1.73e-27 103
MsG0880047507.01.T02 MTR_8g086260 38.168 131 62 4 5 117 309 438 1.63e-16 74.3
MsG0880047507.01.T02 MTR_2g015960 37.168 113 58 4 5 104 302 414 7.63e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047507.01.T01 AT4G25770 68.122 229 60 2 75 303 91 306 5.63e-107 318
MsG0880047507.01.T01 AT4G25770 68.122 229 60 2 75 303 91 306 5.98e-107 318
MsG0880047507.01.T01 AT1G10040 56.769 229 90 3 75 303 79 298 1.11e-84 261
MsG0880047507.01.T01 AT1G10040 56.769 229 90 3 75 303 79 298 2.38e-84 259
MsG0880047507.01.T01 AT5G51180 55.947 227 88 2 77 303 35 249 3.53e-81 250
MsG0880047507.01.T01 AT5G51180 55.947 227 88 2 77 303 35 249 3.53e-81 250
MsG0880047507.01.T01 AT1G29120 47.917 240 112 4 64 303 91 317 5.66e-71 223
MsG0880047507.01.T01 AT1G29120 46.667 240 115 4 64 303 91 317 1.26e-67 216
MsG0880047507.01.T01 AT1G29120 47.059 238 113 4 66 303 93 317 1.59e-67 216
MsG0880047507.01.T01 AT1G29120 46.667 240 115 4 64 303 91 317 5.02e-67 216
MsG0880047507.01.T01 AT1G29120 46.667 240 115 4 64 303 91 317 5.02e-67 216
MsG0880047507.01.T01 AT1G29120 46.667 240 115 4 64 303 91 317 5.27e-67 216
MsG0880047507.01.T01 AT1G29120 46.667 240 115 4 64 303 92 318 5.48e-67 216
MsG0880047507.01.T01 AT1G29120 47.257 237 112 4 64 300 91 314 8.23e-67 216
MsG0880047507.01.T02 AT4G25770 66.667 114 37 1 5 117 303 416 4.64e-49 161
MsG0880047507.01.T02 AT4G25770 63.441 93 33 1 5 96 303 395 9.58e-34 121
MsG0880047507.01.T02 AT1G10040 53.782 119 52 2 2 117 292 410 1.79e-33 120
MsG0880047507.01.T02 AT5G51180 51.786 112 49 3 7 117 248 355 6.27e-28 105
MsG0880047507.01.T02 AT5G51180 51.786 112 49 3 7 117 248 355 6.27e-28 105
MsG0880047507.01.T02 AT1G10040 50.505 99 46 2 2 97 292 390 1.61e-23 93.6
MsG0880047507.01.T02 AT1G29120 36.719 128 63 2 6 116 316 442 1.54e-15 71.6
MsG0880047507.01.T02 AT1G29120 35.659 129 65 2 5 116 314 441 1.01e-14 69.3
MsG0880047507.01.T02 AT1G29120 35.659 129 65 2 5 116 314 441 1.01e-14 69.3
MsG0880047507.01.T02 AT1G29120 35.659 129 65 2 5 116 315 442 1.02e-14 69.3
MsG0880047507.01.T02 AT1G29120 35.345 116 57 2 5 103 314 428 2.45e-11 59.7

Find 168 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAATTTAAATTGCAATTT+TGG 0.048446 8:+87268925 MsG0880047507.01.T01:three_prime_UTR
CAAAGGAATGAATTCGTTTC+TGG 0.111088 8:+87263617 MsG0880047507.01.T01:exon
CCATCATCATCATTATTATT+TGG 0.144612 8:+87263699 MsG0880047507.01.T01:CDS
TACATCATTGTAACAATATA+TGG 0.218947 8:-87267864 None:intergenic
GATATTGAAATTGTCTTAAC+TGG 0.220591 8:+87267753 MsG0880047507.01.T01:three_prime_UTR
AGTGGCTATATGTTAAAATT+TGG 0.235845 8:-87269076 None:intergenic
TTTGGAAGTTTATAGCTTAC+TGG 0.243824 8:+87268894 MsG0880047507.01.T01:three_prime_UTR
TGGCTCTAAACCAGCAATTC+TGG 0.260883 8:-87265189 None:intergenic
CACCTTGTCATCATGGTTAA+TGG 0.263443 8:+87263852 MsG0880047507.01.T01:CDS
TCTTCAAAATTGACATTTGA+TGG 0.269567 8:+87264778 MsG0880047507.01.T01:CDS
GCACTATTATCCTCTACTTT+GGG 0.270378 8:-87263804 None:intergenic
CGGTGGACGATGACTTTATC+TGG 0.282358 8:-87264039 None:intergenic
AAATTTCATCGTCGACGATT+TGG 0.284280 8:+87263756 MsG0880047507.01.T01:CDS
AATGAATTCGTTTCTGGTTT+GGG 0.288219 8:+87263623 MsG0880047507.01.T01:exon
CTTGACTTGTGTTGAAGATA+TGG 0.303879 8:+87267932 MsG0880047507.01.T01:three_prime_UTR
GAATGAATTCGTTTCTGGTT+TGG 0.313753 8:+87263622 MsG0880047507.01.T01:exon
TTTAGAATGGGAGTGATATA+AGG 0.316032 8:+87263139 MsG0880047507.01.T01:five_prime_UTR
GTGTGAACATATGGACTATT+AGG 0.321730 8:-87269826 None:intergenic
AACCTACCTCTGCCTTTCTT+TGG 0.329087 8:+87268876 MsG0880047507.01.T01:three_prime_UTR
GGCACATTCTTTGGGAGGCT+TGG 0.330760 8:+87265037 MsG0880047507.01.T01:CDS
TTGGTATGGTATGTTCTTGT+AGG 0.340815 8:+87268700 MsG0880047507.01.T01:three_prime_UTR
AGGTTAATTATTTCAAAGTT+AGG 0.342152 8:-87268858 None:intergenic
CAAACTGCACATTTAATTGT+AGG 0.343395 8:+87267245 MsG0880047507.01.T01:CDS
AACGTTAATAGATGCTTTGT+TGG 0.344806 8:-87268160 None:intergenic
CATTATGAAGCCAGAATTGC+TGG 0.345215 8:+87265179 MsG0880047507.01.T01:CDS
TTTGAGATGCTCTTCTTTCA+AGG 0.353953 8:-87267226 None:intergenic
GCAGAGGAGCATGGGCCTGC+AGG 0.355919 8:-87267815 None:intergenic
TTGTAGCTTCCATTTCTTTG+TGG 0.358068 8:+87267194 MsG0880047507.01.T01:intron
CACTTGGATTAGTCGGTCCT+TGG 0.359473 8:+87269095 MsG0880047507.01.T01:three_prime_UTR
CATCAGAAAGTCTTTACCTT+TGG 0.363247 8:-87267996 None:intergenic
AGCACTATTATCCTCTACTT+TGG 0.367479 8:-87263805 None:intergenic
TGAAATTTCCATTGAACCTT+GGG 0.382508 8:+87268674 MsG0880047507.01.T01:three_prime_UTR
AGTTCTGCTGATTGGAGATA+TGG 0.382588 8:+87263991 MsG0880047507.01.T01:intron
GGAGGAGAATAAAGGACTTA+AGG 0.389568 8:-87263428 None:intergenic
CTATATCATTATCATCCATT+AGG 0.395288 8:-87267596 None:intergenic
TCTATTGTCAGACGCTGGCC+TGG 0.397053 8:+87264993 MsG0880047507.01.T01:CDS
TGGTATTTGTGAAAGAAGTA+TGG 0.400006 8:+87268274 MsG0880047507.01.T01:three_prime_UTR
CATTTAATTGTAGGGAGAAC+TGG 0.400593 8:+87267254 MsG0880047507.01.T01:CDS
GATTAGTCGGTCCTTGGGTC+AGG 0.413082 8:+87269101 MsG0880047507.01.T01:three_prime_UTR
GTACAGAAGCTTAAGCCTAA+TGG 0.416045 8:+87267581 MsG0880047507.01.T01:three_prime_UTR
ACCTTTGCCACGCCGCATCT+TGG 0.416476 8:+87265224 MsG0880047507.01.T01:CDS
CAATATATAGTGTGAACATA+TGG 0.417623 8:-87269835 None:intergenic
GGGTTAATTGTTTCTTGCAC+TGG 0.421899 8:+87269921 MsG0880047507.01.T02:three_prime_UTR
TCTTCATGTTTATAACCGTT+TGG 0.426183 8:+87268489 MsG0880047507.01.T01:three_prime_UTR
CTACTATTATTTAAAAGTAA+TGG 0.426335 8:+87268772 MsG0880047507.01.T01:three_prime_UTR
ACTATTTGCTTGCCAAGGAT+TGG 0.426538 8:-87263483 None:intergenic
TCCTCCTCACCTTGTCATCA+TGG 0.426931 8:+87263845 MsG0880047507.01.T01:CDS
ACATTCTTTGGGAGGCTTGG+TGG 0.430561 8:+87265040 MsG0880047507.01.T01:CDS
GGGGTCTCACTCAGGTTCAA+TGG 0.431567 8:+87269379 MsG0880047507.01.T02:CDS
CAGAGGAGCATGGGCCTGCA+GGG 0.433064 8:-87267814 None:intergenic
AAAGGAATGCCACAAAGAAA+TGG 0.436032 8:-87267203 None:intergenic
ACCAACCACCCAAGGTTCAA+TGG 0.443041 8:-87268682 None:intergenic
ATGAAATTTCCATTGAACCT+TGG 0.444586 8:+87268673 MsG0880047507.01.T01:three_prime_UTR
GCTATATGTTAAAATTTGGT+AGG 0.444728 8:-87269072 None:intergenic
AATAATAGTAGGAGATCATT+CGG 0.448621 8:-87268760 None:intergenic
GCAAAGGTTATAAAGTTCAT+TGG 0.449119 8:-87265209 None:intergenic
CTATTGTCAGACGCTGGCCT+GGG 0.450168 8:+87264994 MsG0880047507.01.T01:CDS
GATGACAAGGTGAGGAGGAA+TGG 0.454449 8:-87263841 None:intergenic
ACTTGGATTAGTCGGTCCTT+GGG 0.456893 8:+87269096 MsG0880047507.01.T01:three_prime_UTR
GAGTTTATTGACAGCCCTGC+AGG 0.458823 8:+87267800 MsG0880047507.01.T01:three_prime_UTR
AGAAATAGATGACTTTAGAA+TGG 0.459332 8:+87263126 MsG0880047507.01.T01:five_prime_UTR
TGGTTAATGGCATTGTTGGC+AGG 0.459526 8:+87263865 MsG0880047507.01.T01:CDS
TTTGTTTGGGAGGAGAATAA+AGG 0.459875 8:-87263436 None:intergenic
AAGACATCTAATTTGAATAG+AGG 0.466742 8:-87267537 None:intergenic
TTCCTCACGGACAACGATGA+TGG 0.467217 8:+87267287 MsG0880047507.01.T01:CDS
TTCTTCAAATCAATCTAAGT+TGG 0.468949 8:+87263259 MsG0880047507.01.T01:five_prime_UTR
TGAACCTTGGGTGGTTGGTA+TGG 0.469640 8:+87268686 MsG0880047507.01.T01:three_prime_UTR
TTTAGAAACATATTATATGA+AGG 0.469693 8:-87268513 None:intergenic
ATGACAAGGTGAGGAGGAAT+GGG 0.470142 8:-87263840 None:intergenic
GAAATAGATGACTTTAGAAT+GGG 0.472203 8:+87263127 MsG0880047507.01.T01:five_prime_UTR
TCCATTGAACCTTGGGTGGT+TGG 0.477526 8:+87268681 MsG0880047507.01.T01:three_prime_UTR
CCAAATAATAATGATGATGA+TGG 0.479222 8:-87263699 None:intergenic
CATCAGAATCCTCAGTCATT+CGG 0.479267 8:-87267328 None:intergenic
TGTATGATCTTAGTTTCTGA+TGG 0.484256 8:+87268819 MsG0880047507.01.T01:three_prime_UTR
CACTATTATCCTCTACTTTG+GGG 0.486647 8:-87263803 None:intergenic
GGGTCTCACTCAGGTTCAAT+GGG 0.487570 8:+87269380 MsG0880047507.01.T02:CDS
AGCTATAAACTTCCAAAGAA+AGG 0.488354 8:-87268888 None:intergenic
GATGCTCTTCTTTCAAGGAA+AGG 0.488436 8:-87267221 None:intergenic
GAAAACCTACTGGTTGCATT+CGG 0.496407 8:+87269654 MsG0880047507.01.T02:CDS
TAACTTCCTTATCTAGTCTC+TGG 0.496556 8:+87269708 MsG0880047507.01.T02:exon
TTTGCAGTCACAATTTCTGC+AGG 0.496865 8:-87265120 None:intergenic
AAAGAGATCTTCTGCAACCC+AGG 0.497559 8:-87265011 None:intergenic
TTTCATCGTCGACGATTTGG+AGG 0.498910 8:+87263759 MsG0880047507.01.T01:CDS
ATCATGGTTAATGGCATTGT+TGG 0.501862 8:+87263861 MsG0880047507.01.T01:CDS
CTCGTGTGGCAGAGGAGCAT+GGG 0.502013 8:-87267823 None:intergenic
TAGGGTAGTCAAATTCAGAT+TGG 0.502389 8:-87269053 None:intergenic
GATGGAGCACCTCATCAATT+CGG 0.503206 8:+87267958 MsG0880047507.01.T01:three_prime_UTR
AAAACAAAACAAGAATGAAA+AGG 0.503731 8:+87263083 MsG0880047507.01.T01:five_prime_UTR
AAACTGCACATTTAATTGTA+GGG 0.504974 8:+87267246 MsG0880047507.01.T01:CDS
GTCTTGTATTGCAAATTCTA+CGG 0.506523 8:+87269735 MsG0880047507.01.T02:three_prime_UTR
ACAATTTCTGCAGGTAACTT+CGG 0.511380 8:-87265111 None:intergenic
AAGAAACTATTTGCTTGCCA+AGG 0.515228 8:-87263488 None:intergenic
TTGCATTTGCATATGCTACT+CGG 0.516775 8:-87267501 None:intergenic
GCTCGTGTGGCAGAGGAGCA+TGG 0.522092 8:-87267824 None:intergenic
ACTTGTGTTGAAGATATGGT+TGG 0.526168 8:+87267936 MsG0880047507.01.T01:three_prime_UTR
AATCTCAGGTGAAAACCTAC+TGG 0.526558 8:+87269644 MsG0880047507.01.T02:intron
AAGAGTGAGAATCCAATCCT+TGG 0.528384 8:+87263471 MsG0880047507.01.T01:five_prime_UTR
TTCAGCTAGCCTCTCACCCA+TGG 0.528417 8:-87264809 None:intergenic
ATATTGAAATTGTCTTAACT+GGG 0.530069 8:+87267754 MsG0880047507.01.T01:three_prime_UTR
ACATGTGCTGACTTTGACAT+GGG 0.532481 8:-87267628 None:intergenic
ACCAAGATGCGGCGTGGCAA+AGG 0.535141 8:-87265225 None:intergenic
CACATTGTACACACTGAAGG+TGG 0.538544 8:+87268120 MsG0880047507.01.T01:three_prime_UTR
ACCTACTGGTTGCATTCGGA+TGG 0.540251 8:+87269658 MsG0880047507.01.T02:CDS
GATGATAAGGGGTCTCACTC+AGG 0.541264 8:+87269371 MsG0880047507.01.T02:CDS
TGATGAACTGATTCTTGCCA+TGG 0.543831 8:+87268957 MsG0880047507.01.T01:three_prime_UTR
GATTCTCACTCTTGAACATG+TGG 0.544949 8:-87263461 None:intergenic
ATATTATATGAAGGTCCAAA+CGG 0.544971 8:-87268504 None:intergenic
CCAATATATCTGTTGTCAGT+AGG 0.545616 8:-87269871 None:intergenic
TTTGTGGCACATTCTTTGGG+AGG 0.547005 8:+87265032 MsG0880047507.01.T01:CDS
ATAATTAGCTCGTGTGGCAG+AGG 0.548422 8:-87267831 None:intergenic
ATTAGACTAGCAGAAAAGAA+AGG 0.552720 8:-87268070 None:intergenic
TGATAATGATATAGTGTCAA+TGG 0.553869 8:+87267605 MsG0880047507.01.T01:three_prime_UTR
AACAAAGCATCTATTAACGT+TGG 0.554028 8:+87268162 MsG0880047507.01.T01:three_prime_UTR
AAGAAAATAATTAGCTCGTG+TGG 0.558017 8:-87267837 None:intergenic
TCAGTCATTCGGAGGAGAAG+AGG 0.558850 8:-87267317 None:intergenic
TACTGCTCACAGTACAATCC+AGG 0.559859 8:+87269443 MsG0880047507.01.T02:CDS
GGGTGAGAGGCTAGCTGAAG+AGG 0.561017 8:+87264813 MsG0880047507.01.T01:CDS
CAAGAAGTTTACTTAAGATG+AGG 0.571676 8:+87268298 MsG0880047507.01.T01:three_prime_UTR
AAAGCATCTATTAACGTTGG+AGG 0.575697 8:+87268165 MsG0880047507.01.T01:three_prime_UTR
GGCCAGAAAATTGACATGGA+AGG 0.577554 8:+87268186 MsG0880047507.01.T01:three_prime_UTR
AAACTTCCAAAGAAAGGCAG+AGG 0.578320 8:-87268882 None:intergenic
ATATAGCCACTTGGATTAGT+CGG 0.581804 8:+87269088 MsG0880047507.01.T01:three_prime_UTR
TGGTTCAAGAGGACATAGAC+AGG 0.585186 8:+87265244 MsG0880047507.01.T01:CDS
CTATATGTTAAAATTTGGTA+GGG 0.585879 8:-87269071 None:intergenic
AATGAAGTAATCAGCTAGCT+CGG 0.586687 8:-87269771 None:intergenic
ACGCCGCATCTTGGTTCAAG+AGG 0.588632 8:+87265233 MsG0880047507.01.T01:CDS
GGTATGTTCTTGTAGGAGCT+AGG 0.590587 8:+87268707 MsG0880047507.01.T01:three_prime_UTR
CAGAAATTGTGACTGCAAAG+AGG 0.591218 8:+87265124 MsG0880047507.01.T01:CDS
TTTGTAGAGGAGATGATAAG+GGG 0.598296 8:+87269360 MsG0880047507.01.T02:intron
GCAATTACAAGGACTTCTGA+AGG 0.598403 8:-87269986 None:intergenic
GTCATTCGGAGGAGAAGAGG+AGG 0.599564 8:-87267314 None:intergenic
GTGTATTATGAAGTGCATCT+CGG 0.599999 8:+87267720 MsG0880047507.01.T01:three_prime_UTR
TCAGGTTCAATGGGAACGTG+TGG 0.601074 8:+87269389 MsG0880047507.01.T02:CDS
GAATCTCGTATCCTGACCCA+AGG 0.602427 8:-87269112 None:intergenic
ACATTGCCAGAGACTAGATA+AGG 0.604460 8:-87269714 None:intergenic
TTTGAACAACCCCAAAGTAG+AGG 0.605787 8:+87263794 MsG0880047507.01.T01:CDS
CTATTATTTAAAAGTAATGG+TGG 0.607773 8:+87268775 MsG0880047507.01.T01:three_prime_UTR
TTCCATCATCGTTGTCCGTG+AGG 0.608229 8:-87267289 None:intergenic
ATTTGATGGTGTTGATACCA+TGG 0.609716 8:+87264792 MsG0880047507.01.T01:CDS
GTGCGGAGCAGTTTCTCAAG+AGG 0.613223 8:+87264013 MsG0880047507.01.T01:CDS
TACTATCTATTGTCAGACGC+TGG 0.614523 8:+87264988 MsG0880047507.01.T01:CDS
AATTTCCATTGAACCTTGGG+TGG 0.623022 8:+87268677 MsG0880047507.01.T01:three_prime_UTR
TACATGTGCTGACTTTGACA+TGG 0.623566 8:-87267629 None:intergenic
GCGTCAACATGAACTTCCAA+AGG 0.625059 8:+87267980 MsG0880047507.01.T01:three_prime_UTR
CCTTCAGTGTGTACAATGTG+TGG 0.626797 8:-87268117 None:intergenic
TCTTCTCCTCCGAATGACTG+AGG 0.630497 8:+87267319 MsG0880047507.01.T01:CDS
ACCATGATGACAAGGTGAGG+AGG 0.632986 8:-87263846 None:intergenic
GTGTTGAAGATATGGTTGGA+TGG 0.633558 8:+87267940 MsG0880047507.01.T01:three_prime_UTR
CCACACATTGTACACACTGA+AGG 0.635968 8:+87268117 MsG0880047507.01.T01:three_prime_UTR
TATTGAAATTGTCTTAACTG+GGG 0.639046 8:+87267755 MsG0880047507.01.T01:three_prime_UTR
TTTGATGGTGTTGATACCAT+GGG 0.642006 8:+87264793 MsG0880047507.01.T01:CDS
ACATTGTACACACTGAAGGT+GGG 0.643420 8:+87268121 MsG0880047507.01.T01:three_prime_UTR
ATGTTGACGCCGAATTGATG+AGG 0.645392 8:-87267967 None:intergenic
TGCCATTAACCATGATGACA+AGG 0.651118 8:-87263854 None:intergenic
CAGAATCCTCAGTCATTCGG+AGG 0.654072 8:-87267325 None:intergenic
TTCCAAAGAAAGGCAGAGGT+AGG 0.654754 8:-87268878 None:intergenic
ATAATGATGATGATGGCGTA+AGG 0.658967 8:-87263692 None:intergenic
TGGAGGCCAGAAAATTGACA+TGG 0.659078 8:+87268182 MsG0880047507.01.T01:three_prime_UTR
CATACCATACCAACCACCCA+AGG 0.661282 8:-87268690 None:intergenic
TGTCCTCTTGAACCAAGATG+CGG 0.666886 8:-87265236 None:intergenic
CTTCAGTGTGTACAATGTGT+GGG 0.669488 8:-87268116 None:intergenic
TTAACCATGATGACAAGGTG+AGG 0.670354 8:-87263849 None:intergenic
TGCTGATTGGAGATATGGTG+CGG 0.674450 8:+87263996 MsG0880047507.01.T01:CDS
GTGTTGATACCATGGGTGAG+AGG 0.674872 8:+87264800 MsG0880047507.01.T01:CDS
TCTTGAACCAAGATGCGGCG+TGG 0.680746 8:-87265231 None:intergenic
ACCATCCGAATGCAACCAGT+AGG 0.686623 8:-87269659 None:intergenic
CAAGGACCGACTAATCCAAG+TGG 0.729900 8:-87269094 None:intergenic
GCTTTCAGAAGAGTAAACAG+CGG 0.740467 8:+87269418 MsG0880047507.01.T02:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTTATTTTATTATATC+TGG + Chr8:87269004-87269023 MsG0880047507.01.T01:three_prime_UTR 10.0%
!!! TTTAAAAAGTGTTTTTTTAA+AGG - Chr8:87263367-87263386 None:intergenic 10.0%
!! AAAAAAAAAAATTAACAGCT+TGG + Chr8:87269139-87269158 MsG0880047507.01.T02:intron 15.0%
!! AGAAAAAATGTATAAAGTAT+AGG + Chr8:87268437-87268456 MsG0880047507.01.T01:three_prime_UTR 15.0%
!! ATCTTACTAATAATAAGAAA+GGG - Chr8:87265942-87265961 None:intergenic 15.0%
!! CATTAACAATTTAATTGAAT+TGG - Chr8:87267448-87267467 None:intergenic 15.0%
!! CTACTATTATTTAAAAGTAA+TGG + Chr8:87268772-87268791 MsG0880047507.01.T01:three_prime_UTR 15.0%
!! GAAATAATCAAAATATACAT+AGG - Chr8:87267094-87267113 None:intergenic 15.0%
!! TATCTTACTAATAATAAGAA+AGG - Chr8:87265943-87265962 None:intergenic 15.0%
!! TTTAGAAACATATTATATGA+AGG - Chr8:87268516-87268535 None:intergenic 15.0%
!! TTTCTTATTATTAGTAAGAT+AGG + Chr8:87265942-87265961 MsG0880047507.01.T01:intron 15.0%
!!! ATTTGAAATTATACAAACAA+CGG + Chr8:87266973-87266992 MsG0880047507.01.T01:intron 15.0%
!!! CACTTTTTCATTTTATTAAA+GGG + Chr8:87266934-87266953 MsG0880047507.01.T01:intron 15.0%
!!! CATTACTTTTAAATAATAGT+AGG - Chr8:87268774-87268793 None:intergenic 15.0%
!!! GTAATTTAAATTGCAATTTT+GGG + Chr8:87268926-87268945 MsG0880047507.01.T01:three_prime_UTR 15.0%
!!! GTAATTTTAATGATATATTG+TGG + Chr8:87264737-87264756 MsG0880047507.01.T01:intron 15.0%
!!! TACTTTTTTTTATAGAGAAA+AGG + Chr8:87268607-87268626 MsG0880047507.01.T01:three_prime_UTR 15.0%
!!! TCACTTTTTCATTTTATTAA+AGG + Chr8:87266933-87266952 MsG0880047507.01.T01:intron 15.0%
!!! TGTAATTTAAATTGCAATTT+TGG + Chr8:87268925-87268944 MsG0880047507.01.T01:three_prime_UTR 15.0%
!!! TTTGTTTACTTTTAATTATC+TGG - Chr8:87269192-87269211 None:intergenic 15.0%
!! AAAAACAAACTTAAATGACT+CGG - Chr8:87267377-87267396 None:intergenic 20.0%
!! AAAACAAAACAAGAATGAAA+AGG + Chr8:87263083-87263102 MsG0880047507.01.T01:five_prime_UTR 20.0%
!! AACAGACAAATAAAATATCA+CGG - Chr8:87269624-87269643 None:intergenic 20.0%
!! AACTTAATTCATGTTTATCT+AGG + Chr8:87264965-87264984 MsG0880047507.01.T01:intron 20.0%
!! AAGTGTAAACAATATTATTG+TGG + Chr8:87264552-87264571 MsG0880047507.01.T01:intron 20.0%
!! AATGTGAATGAATTATCATA+AGG - Chr8:87264929-87264948 None:intergenic 20.0%
!! AGGTTAATTATTTCAAAGTT+AGG - Chr8:87268861-87268880 None:intergenic 20.0%
!! ATAACTATTATCAGTTAATC+CGG + Chr8:87264322-87264341 MsG0880047507.01.T01:intron 20.0%
!! ATATTGAAATTGTCTTAACT+GGG + Chr8:87267754-87267773 MsG0880047507.01.T01:three_prime_UTR 20.0%
!! CTAGAAAAAACAGATATATT+GGG + Chr8:87269901-87269920 MsG0880047507.01.T02:intron 20.0%
!! CTATATGTTAAAATTTGGTA+GGG - Chr8:87269074-87269093 None:intergenic 20.0%
!! CTATTATTTAAAAGTAATGG+TGG + Chr8:87268775-87268794 MsG0880047507.01.T01:three_prime_UTR 20.0%
!! GAAAAAACAAAACAAAACAA+AGG + Chr8:87263600-87263619 MsG0880047507.01.T01:five_prime_UTR 20.0%
!! GTTGTTTGTATAATTTCAAA+TGG - Chr8:87266974-87266993 None:intergenic 20.0%
!! TAAAAATCCCTATCAATAAT+AGG + Chr8:87266177-87266196 MsG0880047507.01.T01:intron 20.0%
!! TACATCATTGTAACAATATA+TGG - Chr8:87267867-87267886 None:intergenic 20.0%
!! TATAAGATAAAAACTTTACC+TGG - Chr8:87269464-87269483 None:intergenic 20.0%
!! TATTGTATATGTAATTCACA+CGG + Chr8:87264092-87264111 MsG0880047507.01.T01:intron 20.0%
!! TCTTACTAATAATAAGAAAG+GGG - Chr8:87265941-87265960 None:intergenic 20.0%
!! TTCGATAATTATTAATCTAC+TGG + Chr8:87269218-87269237 MsG0880047507.01.T02:intron 20.0%
!!! AATCTTAATGATGTTTTACA+TGG + Chr8:87268025-87268044 MsG0880047507.01.T01:three_prime_UTR 20.0%
!!! AATTTTGCATATATGGATTT+AGG + Chr8:87264299-87264318 MsG0880047507.01.T01:intron 20.0%
!!! ACATGAATTAAGTTTAAAAC+TGG - Chr8:87264959-87264978 None:intergenic 20.0%
!!! ATTGTGGATTTTCATATAAA+TGG + Chr8:87264568-87264587 MsG0880047507.01.T01:intron 20.0%
! AAACTGCACATTTAATTGTA+GGG + Chr8:87267246-87267265 MsG0880047507.01.T01:CDS 25.0%
! AAGACATCTAATTTGAATAG+AGG - Chr8:87267540-87267559 None:intergenic 25.0%
! AATAATAGTAGGAGATCATT+CGG - Chr8:87268763-87268782 None:intergenic 25.0%
! AATTACTAATCTTCAGTTGA+TGG - Chr8:87265761-87265780 None:intergenic 25.0%
! ACTAATAACACAAATCTCTA+AGG - Chr8:87265562-87265581 None:intergenic 25.0%
! AGAGAAAACCATAAATCATA+GGG + Chr8:87265588-87265607 MsG0880047507.01.T01:intron 25.0%
! AGTGGCTATATGTTAAAATT+TGG - Chr8:87269079-87269098 None:intergenic 25.0%
! ATATATGATTATGAGAGTGA+AGG - Chr8:87263903-87263922 None:intergenic 25.0%
! ATATTATATGAAGGTCCAAA+CGG - Chr8:87268507-87268526 None:intergenic 25.0%
! CAAAATCATCTGTCAAATTA+TGG - Chr8:87264496-87264515 None:intergenic 25.0%
! CAATATATAGTGTGAACATA+TGG - Chr8:87269838-87269857 None:intergenic 25.0%
! CCATCATCATCATTATTATT+TGG + Chr8:87263699-87263718 MsG0880047507.01.T01:CDS 25.0%
! CCATTACATTGCAAAAAATA+AGG + Chr8:87266327-87266346 MsG0880047507.01.T01:intron 25.0%
! CCTAGAAAAAACAGATATAT+TGG + Chr8:87269900-87269919 MsG0880047507.01.T02:intron 25.0%
! CTATATCATTATCATCCATT+AGG - Chr8:87267599-87267618 None:intergenic 25.0%
! CTTACTAATAATAAGAAAGG+GGG - Chr8:87265940-87265959 None:intergenic 25.0%
! CTTTGTATGTATCTAATTGT+TGG + Chr8:87264396-87264415 MsG0880047507.01.T01:intron 25.0%
! GATATTGAAATTGTCTTAAC+TGG + Chr8:87267753-87267772 MsG0880047507.01.T01:three_prime_UTR 25.0%
! GCTATATGTTAAAATTTGGT+AGG - Chr8:87269075-87269094 None:intergenic 25.0%
! GTCAAATTATGGTATAACAA+GGG - Chr8:87264485-87264504 None:intergenic 25.0%
! TAAAACATTTCACTTCAAGT+TGG - Chr8:87265446-87265465 None:intergenic 25.0%
! TAAATTGTTAATGATTGTGC+AGG + Chr8:87267455-87267474 MsG0880047507.01.T01:intron 25.0%
! TATTGAAATTGTCTTAACTG+GGG + Chr8:87267755-87267774 MsG0880047507.01.T01:three_prime_UTR 25.0%
! TCTTCAAAATTGACATTTGA+TGG + Chr8:87264778-87264797 MsG0880047507.01.T01:CDS 25.0%
! TGTCAAATTATGGTATAACA+AGG - Chr8:87264486-87264505 None:intergenic 25.0%
! TTCTTCAAATCAATCTAAGT+TGG + Chr8:87263259-87263278 MsG0880047507.01.T01:five_prime_UTR 25.0%
! TTTAATGATATATTGTGGAC+AGG + Chr8:87264742-87264761 MsG0880047507.01.T01:intron 25.0%
! TTTATTTGTCTGTTAATCTC+AGG + Chr8:87269630-87269649 MsG0880047507.01.T02:intron 25.0%
! TTTGACAACGAAAACAATTT+AGG - Chr8:87266755-87266774 None:intergenic 25.0%
!! ACTAATTCATCATGTTTTGT+GGG - Chr8:87264220-87264239 None:intergenic 25.0%
!! AGAAATAGATGACTTTAGAA+TGG + Chr8:87263126-87263145 MsG0880047507.01.T01:five_prime_UTR 25.0%
!! AGATTTGTGTTATTAGTATG+AGG + Chr8:87265565-87265584 MsG0880047507.01.T01:intron 25.0%
!! ATATTTTACAAATCAGTCCA+TGG - Chr8:87268977-87268996 None:intergenic 25.0%
!! ATTTATGCTCCTTAATTTTC+CGG + Chr8:87267168-87267187 MsG0880047507.01.T01:intron 25.0%
!! CCAAAGTAATTTAAAGTTCA+GGG - Chr8:87264882-87264901 None:intergenic 25.0%
!! CCAAATAATAATGATGATGA+TGG - Chr8:87263702-87263721 None:intergenic 25.0%
!! GAGCTAAAATTTTGCATATA+TGG + Chr8:87264292-87264311 MsG0880047507.01.T01:intron 25.0%
!! GTTTTTATCTTATAGCTTTC+CGG + Chr8:87269470-87269489 MsG0880047507.01.T02:intron 25.0%
!! TATCTACAGAGATTTTCTTA+CGG - Chr8:87264062-87264081 None:intergenic 25.0%
!! TCCAAAGTAATTTAAAGTTC+AGG - Chr8:87264883-87264902 None:intergenic 25.0%
!! TGATAATGATATAGTGTCAA+TGG + Chr8:87267605-87267624 MsG0880047507.01.T01:three_prime_UTR 25.0%
!! TTGAAAATAGCTTCTCATTT+TGG + Chr8:87264598-87264617 MsG0880047507.01.T01:intron 25.0%
!! TTTAGAGTAATCAAAAAGTC+TGG - Chr8:87265081-87265100 None:intergenic 25.0%
!!! AAAGGATATTTTGATAACTG+TGG + Chr8:87268625-87268644 MsG0880047507.01.T01:three_prime_UTR 25.0%
!!! AATTTTAACATATAGCCACT+TGG + Chr8:87269079-87269098 MsG0880047507.01.T01:three_prime_UTR 25.0%
!!! ACAGGTTGAAATTTTTTATC+TGG + Chr8:87264652-87264671 MsG0880047507.01.T01:intron 25.0%
!!! AGACAGTTTTTATTTCTTAC+AGG - Chr8:87268225-87268244 None:intergenic 25.0%
!!! ATATTAAGTGGTTTTTGAGA+AGG - Chr8:87265714-87265733 None:intergenic 25.0%
!!! CCAATATATCTGTTTTTTCT+AGG - Chr8:87269903-87269922 None:intergenic 25.0%
!!! CCTTATTTTTTGCAATGTAA+TGG - Chr8:87266330-87266349 None:intergenic 25.0%
!!! CTAGGAAAATTTGTTTTTCT+TGG + Chr8:87268725-87268744 MsG0880047507.01.T01:three_prime_UTR 25.0%
!!! GAAATAGATGACTTTAGAAT+GGG + Chr8:87263127-87263146 MsG0880047507.01.T01:five_prime_UTR 25.0%
AACGTTAATAGATGCTTTGT+TGG - Chr8:87268163-87268182 None:intergenic 30.0%
AAGAAAAAATAGCAGATGTC+AGG - Chr8:87265349-87265368 None:intergenic 30.0%
AAGAAAATAATTAGCTCGTG+TGG - Chr8:87267840-87267859 None:intergenic 30.0%
AAGACTAGAAATTGTATGCT+AGG - Chr8:87269277-87269296 None:intergenic 30.0%
AATAAACTCGTGAATTGACT+TGG + Chr8:87264425-87264444 MsG0880047507.01.T01:intron 30.0%
AGACTAGAAATTGTATGCTA+GGG - Chr8:87269276-87269295 None:intergenic 30.0%
AGATGTCAGGCAAAAAATAA+AGG - Chr8:87265336-87265355 None:intergenic 30.0%
AGCAAAGTAAAAAAGAGGAA+AGG - Chr8:87268470-87268489 None:intergenic 30.0%
AGCTATAAACTTCCAAAGAA+AGG - Chr8:87268891-87268910 None:intergenic 30.0%
AGCTTAAAATTGCATACAAG+AGG + Chr8:87265482-87265501 MsG0880047507.01.T01:intron 30.0%
ATGAAATTTCCATTGAACCT+TGG + Chr8:87268673-87268692 MsG0880047507.01.T01:three_prime_UTR 30.0%
ATGGATCATGTCATATTAAG+TGG - Chr8:87265726-87265745 None:intergenic 30.0%
ATTAGACTAGCAGAAAAGAA+AGG - Chr8:87268073-87268092 None:intergenic 30.0%
CAAACTGCACATTTAATTGT+AGG + Chr8:87267245-87267264 MsG0880047507.01.T01:CDS 30.0%
CAAATACCAGAGACAAAAAA+AGG - Chr8:87268263-87268282 None:intergenic 30.0%
CAAGAAGTTTACTTAAGATG+AGG + Chr8:87268298-87268317 MsG0880047507.01.T01:three_prime_UTR 30.0%
CCCTGAACTTTAAATTACTT+TGG + Chr8:87264879-87264898 MsG0880047507.01.T01:intron 30.0%
CTACTGACAACAGATATATT+GGG + Chr8:87269872-87269891 MsG0880047507.01.T02:intron 30.0%
CTGAAAATTCCAAATGCATT+TGG - Chr8:87263973-87263992 None:intergenic 30.0%
GAGAGAAAACCATAAATCAT+AGG + Chr8:87265587-87265606 MsG0880047507.01.T01:intron 30.0%
GCAAAGGTTATAAAGTTCAT+TGG - Chr8:87265212-87265231 None:intergenic 30.0%
GTCTTGTATTGCAAATTCTA+CGG + Chr8:87269735-87269754 MsG0880047507.01.T02:three_prime_UTR 30.0%
GTGTACACAAATATAAGTGA+CGG + Chr8:87264627-87264646 MsG0880047507.01.T01:intron 30.0%
TATTTCATTTGTAGCAGCTT+GGG + Chr8:87267108-87267127 MsG0880047507.01.T01:intron 30.0%
TCTTCATGTTTATAACCGTT+TGG + Chr8:87268489-87268508 MsG0880047507.01.T01:three_prime_UTR 30.0%
TGAAATTTCCATTGAACCTT+GGG + Chr8:87268674-87268693 MsG0880047507.01.T01:three_prime_UTR 30.0%
TGAAGAGCAAAGTAAAAAAG+AGG - Chr8:87268475-87268494 None:intergenic 30.0%
TGGTATTTGTGAAAGAAGTA+TGG + Chr8:87268274-87268293 MsG0880047507.01.T01:three_prime_UTR 30.0%
TGTATGATCTTAGTTTCTGA+TGG + Chr8:87268819-87268838 MsG0880047507.01.T01:three_prime_UTR 30.0%
TTACCTTCTTCTTAGAGAAA+GGG - Chr8:87265978-87265997 None:intergenic 30.0%
TTATTGATGCTCAAGTATGA+AGG + Chr8:87264350-87264369 MsG0880047507.01.T01:intron 30.0%
TTATTTCATTTGTAGCAGCT+TGG + Chr8:87267107-87267126 MsG0880047507.01.T01:intron 30.0%
TTTGGAAGTTTATAGCTTAC+TGG + Chr8:87268894-87268913 MsG0880047507.01.T01:three_prime_UTR 30.0%
! AACAAAGCATCTATTAACGT+TGG + Chr8:87268162-87268181 MsG0880047507.01.T01:three_prime_UTR 30.0%
! ACAAATCTCTAAGGAAACAA+GGG - Chr8:87265553-87265572 None:intergenic 30.0%
! ATAATATCCACAAGTTTTGC+CGG - Chr8:87269492-87269511 None:intergenic 30.0%
! ATTTTGCCAGATATCTTCAT+AGG + Chr8:87266778-87266797 MsG0880047507.01.T01:intron 30.0%
! CACTAATTCATCATGTTTTG+TGG - Chr8:87264221-87264240 None:intergenic 30.0%
! TAAGGAGCATAAATAAGAGA+CGG - Chr8:87267162-87267181 None:intergenic 30.0%
! TAGTTGCAATTTGATCCTTT+TGG + Chr8:87264844-87264863 MsG0880047507.01.T01:intron 30.0%
! TTTAGAATGGGAGTGATATA+AGG + Chr8:87263139-87263158 MsG0880047507.01.T01:five_prime_UTR 30.0%
! TTTTGTAGAGGAGATGATAA+GGG + Chr8:87269359-87269378 MsG0880047507.01.T02:intron 30.0%
! TTTTTGTAGAGGAGATGATA+AGG + Chr8:87269358-87269377 MsG0880047507.01.T02:intron 30.0%
!! AATACACATGCTTTTTGTAG+AGG + Chr8:87269347-87269366 MsG0880047507.01.T02:intron 30.0%
!! AATGAATTCGTTTCTGGTTT+GGG + Chr8:87263623-87263642 MsG0880047507.01.T01:exon 30.0%
!!! AAATTGCAATTTTGGGTTTC+TGG + Chr8:87268933-87268952 MsG0880047507.01.T01:three_prime_UTR 30.0%
!!! ATTTTTAGCTCGTACAACAA+AGG - Chr8:87267009-87267028 None:intergenic 30.0%
!!! TCAGGTTTTATTTTGCTTTC+AGG + Chr8:87268332-87268351 MsG0880047507.01.T01:three_prime_UTR 30.0%
!!! TGTAAACCTTTTTTTGTCTC+TGG + Chr8:87268254-87268273 MsG0880047507.01.T01:three_prime_UTR 30.0%
!!! TTTTTTCCCTCTCAACTAAA+AGG - Chr8:87263190-87263209 None:intergenic 30.0%
AAAACCATAAATCATAGGGC+TGG + Chr8:87265592-87265611 MsG0880047507.01.T01:intron 35.0%
AAACTGCAACCAAATGCATT+TGG + Chr8:87263961-87263980 MsG0880047507.01.T01:intron 35.0%
AAAGGAATGCCACAAAGAAA+TGG - Chr8:87267206-87267225 None:intergenic 35.0%
AAATTTCATCGTCGACGATT+TGG + Chr8:87263756-87263775 MsG0880047507.01.T01:CDS 35.0%
AACATGATGAATTAGTGCGA+AGG + Chr8:87264224-87264243 MsG0880047507.01.T01:intron 35.0%
AAGAAACTATTTGCTTGCCA+AGG - Chr8:87263491-87263510 None:intergenic 35.0%
AATCCCTATCAATAATAGGC+CGG + Chr8:87266181-87266200 MsG0880047507.01.T01:intron 35.0%
AATGAAGTAATCAGCTAGCT+CGG - Chr8:87269774-87269793 None:intergenic 35.0%
ACAATTTCTGCAGGTAACTT+CGG - Chr8:87265114-87265133 None:intergenic 35.0%
ACTTGTGTTGAAGATATGGT+TGG + Chr8:87267936-87267955 MsG0880047507.01.T01:three_prime_UTR 35.0%
AGAAAAAGAGAAAGCTGAGT+TGG + Chr8:87263534-87263553 MsG0880047507.01.T01:five_prime_UTR 35.0%
AGCACTATTATCCTCTACTT+TGG - Chr8:87263808-87263827 None:intergenic 35.0%
ATCATGGTTAATGGCATTGT+TGG + Chr8:87263861-87263880 MsG0880047507.01.T01:CDS 35.0%
ATTCCGGCCTATTATTGATA+GGG - Chr8:87266187-87266206 None:intergenic 35.0%
CAAAGGAATGAATTCGTTTC+TGG + Chr8:87263617-87263636 MsG0880047507.01.T01:exon 35.0%
CAAATATAAGTGACGGTAAC+AGG + Chr8:87264634-87264653 MsG0880047507.01.T01:intron 35.0%
CACTATTATCCTCTACTTTG+GGG - Chr8:87263806-87263825 None:intergenic 35.0%
CATAATCAAGCTATTGGGAT+AGG + Chr8:87267065-87267084 MsG0880047507.01.T01:intron 35.0%
CATCAGAAAGTCTTTACCTT+TGG - Chr8:87267999-87268018 None:intergenic 35.0%
CATTTAATTGTAGGGAGAAC+TGG + Chr8:87267254-87267273 MsG0880047507.01.T01:CDS 35.0%
CCAATATATCTGTTGTCAGT+AGG - Chr8:87269874-87269893 None:intergenic 35.0%
CCTACTGACAACAGATATAT+TGG + Chr8:87269871-87269890 MsG0880047507.01.T02:intron 35.0%
CTACAAGAACCGGAAAATTA+AGG - Chr8:87267180-87267199 None:intergenic 35.0%
CTATAATGTAGAATATGCGC+GGG + Chr8:87266607-87266626 MsG0880047507.01.T01:intron 35.0%
CTATTATACGCGAATTCCTT+GGG + Chr8:87266352-87266371 MsG0880047507.01.T01:intron 35.0%
CTTACCTTCTTCTTAGAGAA+AGG - Chr8:87265979-87265998 None:intergenic 35.0%
GCACTATTATCCTCTACTTT+GGG - Chr8:87263807-87263826 None:intergenic 35.0%
GCTATAATGTAGAATATGCG+CGG + Chr8:87266606-87266625 MsG0880047507.01.T01:intron 35.0%
GTATCAAAGTTGAATTGCGA+AGG - Chr8:87265653-87265672 None:intergenic 35.0%
GTCAGGCAAAAAATAAAGGT+AGG - Chr8:87265332-87265351 None:intergenic 35.0%
GTGTATTATGAAGTGCATCT+CGG + Chr8:87267720-87267739 MsG0880047507.01.T01:three_prime_UTR 35.0%
TAACTTCCTTATCTAGTCTC+TGG + Chr8:87269708-87269727 MsG0880047507.01.T02:exon 35.0%
TACCTTCTTCTTAGAGAAAG+GGG - Chr8:87265977-87265996 None:intergenic 35.0%
TAGGGTAGTCAAATTCAGAT+TGG - Chr8:87269056-87269075 None:intergenic 35.0%
TATATATATTCCGCCAACAG+TGG - Chr8:87266650-87266669 None:intergenic 35.0%
TATGATTATGAGAGTGAAGG+TGG - Chr8:87263900-87263919 None:intergenic 35.0%
TATTTCCCTGTAACCAGAAA+GGG + Chr8:87266416-87266435 MsG0880047507.01.T01:intron 35.0%
TCCCAATAGCTTGATTATGA+CGG - Chr8:87267064-87267083 None:intergenic 35.0%
TCCGTCATAATCAAGCTATT+GGG + Chr8:87267060-87267079 MsG0880047507.01.T01:intron 35.0%
TCTATTATACGCGAATTCCT+TGG + Chr8:87266351-87266370 MsG0880047507.01.T01:intron 35.0%
TTATTTCCCTGTAACCAGAA+AGG + Chr8:87266415-87266434 MsG0880047507.01.T01:intron 35.0%
TTCCGTCATAATCAAGCTAT+TGG + Chr8:87267059-87267078 MsG0880047507.01.T01:intron 35.0%
TTCGACCCTTCTTTCTAAAT+GGG - Chr8:87266469-87266488 None:intergenic 35.0%
TTGAGCATCAATAAACTGAC+CGG - Chr8:87264344-87264363 None:intergenic 35.0%
TTGATACGAAAGTTACAGAC+CGG + Chr8:87265666-87265685 MsG0880047507.01.T01:intron 35.0%
TTGCATTTGCATATGCTACT+CGG - Chr8:87267504-87267523 None:intergenic 35.0%
TTGGTATGGTATGTTCTTGT+AGG + Chr8:87268700-87268719 MsG0880047507.01.T01:three_prime_UTR 35.0%
TTGTAGCTTCCATTTCTTTG+TGG + Chr8:87267194-87267213 MsG0880047507.01.T01:intron 35.0%
TTTGTAGAGGAGATGATAAG+GGG + Chr8:87269360-87269379 MsG0880047507.01.T02:intron 35.0%
TTTGTTTGGGAGGAGAATAA+AGG - Chr8:87263439-87263458 None:intergenic 35.0%
! AAAGCATCTATTAACGTTGG+AGG + Chr8:87268165-87268184 MsG0880047507.01.T01:three_prime_UTR 35.0%
! AACCTTCCATGTCAATTTTC+TGG - Chr8:87268191-87268210 None:intergenic 35.0%
! AGGATAGTCGTGCATATTTT+TGG + Chr8:87268352-87268371 MsG0880047507.01.T01:three_prime_UTR 35.0%
! ATGTTTTGTGGGACCTAAAT+AGG - Chr8:87264209-87264228 None:intergenic 35.0%
! CACAAATCTCTAAGGAAACA+AGG - Chr8:87265554-87265573 None:intergenic 35.0%
! GAATTTTCAGTTCTGCTGAT+TGG + Chr8:87263983-87264002 MsG0880047507.01.T01:intron 35.0%
! GATGAGGAAATTTTCATCTC+AGG + Chr8:87268314-87268333 MsG0880047507.01.T01:three_prime_UTR 35.0%
! GTGTGAACATATGGACTATT+AGG - Chr8:87269829-87269848 None:intergenic 35.0%
! TCTTTTGTGGCACATTCTTT+GGG + Chr8:87265029-87265048 MsG0880047507.01.T01:CDS 35.0%
! TGGTAAACATCTTTTCCTCA+CGG + Chr8:87267274-87267293 MsG0880047507.01.T01:CDS 35.0%
! TTGAACATGTGGCTTTTGTT+TGG - Chr8:87263453-87263472 None:intergenic 35.0%
! TTTGAGATGCTCTTCTTTCA+AGG - Chr8:87267229-87267248 None:intergenic 35.0%
!! ACTAGATCCTTTTAGTTGAG+AGG + Chr8:87263180-87263199 MsG0880047507.01.T01:five_prime_UTR 35.0%
!! AGTCATCTGTGCTTTTTGAT+TGG + Chr8:87265401-87265420 MsG0880047507.01.T01:intron 35.0%
!! ATAATGATGATGATGGCGTA+AGG - Chr8:87263695-87263714 None:intergenic 35.0%
!! ATATAGCCACTTGGATTAGT+CGG + Chr8:87269088-87269107 MsG0880047507.01.T01:three_prime_UTR 35.0%
!! ATTTGATGGTGTTGATACCA+TGG + Chr8:87264792-87264811 MsG0880047507.01.T01:CDS 35.0%
!! CTAGATCCTTTTAGTTGAGA+GGG + Chr8:87263181-87263200 MsG0880047507.01.T01:five_prime_UTR 35.0%
!! CTTGACTTGTGTTGAAGATA+TGG + Chr8:87267932-87267951 MsG0880047507.01.T01:three_prime_UTR 35.0%
!! GAATGAATTCGTTTCTGGTT+TGG + Chr8:87263622-87263641 MsG0880047507.01.T01:exon 35.0%
!! TAATCTTCAGTTGATGGTTC+TGG - Chr8:87265755-87265774 None:intergenic 35.0%
!! TAGCTTCTCATTTTGGTGAA+CGG + Chr8:87264605-87264624 MsG0880047507.01.T01:intron 35.0%
!! TGAACATGTGGCTTTTGTTT+GGG - Chr8:87263452-87263471 None:intergenic 35.0%
!! TTGATGGTTCTGGAATGATA+TGG - Chr8:87265745-87265764 None:intergenic 35.0%
!! TTTGATGGTGTTGATACCAT+GGG + Chr8:87264793-87264812 MsG0880047507.01.T01:CDS 35.0%
!!! TAGTCGTGCATATTTTTGGT+AGG + Chr8:87268356-87268375 MsG0880047507.01.T01:three_prime_UTR 35.0%
AAACTTCCAAAGAAAGGCAG+AGG - Chr8:87268885-87268904 None:intergenic 40.0%
AAAGATCTCTTGATTCCTCG+CGG + Chr8:87265874-87265893 MsG0880047507.01.T01:intron 40.0%
AAGAGTGAGAATCCAATCCT+TGG + Chr8:87263471-87263490 MsG0880047507.01.T01:five_prime_UTR 40.0%
AAGATTGCCACAATTTCAGC+TGG + Chr8:87269593-87269612 MsG0880047507.01.T02:intron 40.0%
AATAAGAAAGGGGGTGAGAT+AGG - Chr8:87265931-87265950 None:intergenic 40.0%
AATCTCAGGTGAAAACCTAC+TGG + Chr8:87269644-87269663 MsG0880047507.01.T02:intron 40.0%
AATTTCCATTGAACCTTGGG+TGG + Chr8:87268677-87268696 MsG0880047507.01.T01:three_prime_UTR 40.0%
ACATTGCCAGAGACTAGATA+AGG - Chr8:87269717-87269736 None:intergenic 40.0%
ACATTGTACACACTGAAGGT+GGG + Chr8:87268121-87268140 MsG0880047507.01.T01:three_prime_UTR 40.0%
ACTATTTGCTTGCCAAGGAT+TGG - Chr8:87263486-87263505 None:intergenic 40.0%
ACTTAAGTGTGTGTGCATAC+TGG + Chr8:87267132-87267151 MsG0880047507.01.T01:intron 40.0%
AGGAATCAAGAGATCTTTGC+CGG - Chr8:87265872-87265891 None:intergenic 40.0%
CACCTTGTCATCATGGTTAA+TGG + Chr8:87263852-87263871 MsG0880047507.01.T01:CDS 40.0%
CAGAAATTGTGACTGCAAAG+AGG + Chr8:87265124-87265143 MsG0880047507.01.T01:CDS 40.0%
CATCAGAATCCTCAGTCATT+CGG - Chr8:87267331-87267350 None:intergenic 40.0%
CATTATGAAGCCAGAATTGC+TGG + Chr8:87265179-87265198 MsG0880047507.01.T01:CDS 40.0%
CATTCCGGCCTATTATTGAT+AGG - Chr8:87266188-87266207 None:intergenic 40.0%
CATTTAGAAAGAAGGGTCGA+AGG + Chr8:87266468-87266487 MsG0880047507.01.T01:intron 40.0%
CTATCAATAATAGGCCGGAA+TGG + Chr8:87266186-87266205 MsG0880047507.01.T01:intron 40.0%
CTTCAGTGTGTACAATGTGT+GGG - Chr8:87268119-87268138 None:intergenic 40.0%
CTTCGACCCTTCTTTCTAAA+TGG - Chr8:87266470-87266489 None:intergenic 40.0%
CTTTCCAGCCCTATGATTTA+TGG - Chr8:87265599-87265618 None:intergenic 40.0%
GAAATGGAAGCTACAAGAAC+CGG - Chr8:87267190-87267209 None:intergenic 40.0%
GAACTCAAAGCCTGTTTCAT+AGG - Chr8:87266308-87266327 None:intergenic 40.0%
GACAACAATCCAAAAAGCGA+AGG - Chr8:87266037-87266056 None:intergenic 40.0%
GATCCTTAATAGTCCACTGT+TGG + Chr8:87266634-87266653 MsG0880047507.01.T01:intron 40.0%
GATCTATAGAGATGCGCTAT+CGG + Chr8:87266374-87266393 MsG0880047507.01.T01:intron 40.0%
GATGCTCTTCTTTCAAGGAA+AGG - Chr8:87267224-87267243 None:intergenic 40.0%
GATTCTCACTCTTGAACATG+TGG - Chr8:87263464-87263483 None:intergenic 40.0%
GCTTTCAGAAGAGTAAACAG+CGG + Chr8:87269418-87269437 MsG0880047507.01.T02:CDS 40.0%
GGAGGAGAATAAAGGACTTA+AGG - Chr8:87263431-87263450 None:intergenic 40.0%
GGGAAGTTTAAGAGACCAAA+AGG - Chr8:87264862-87264881 None:intergenic 40.0%
GTACAGAAGCTTAAGCCTAA+TGG + Chr8:87267581-87267600 MsG0880047507.01.T01:three_prime_UTR 40.0%
GTGTTGAAGATATGGTTGGA+TGG + Chr8:87267940-87267959 MsG0880047507.01.T01:three_prime_UTR 40.0%
TACTATCTATTGTCAGACGC+TGG + Chr8:87264988-87265007 MsG0880047507.01.T01:CDS 40.0%
TCGACCCTTCTTTCTAAATG+GGG - Chr8:87266468-87266487 None:intergenic 40.0%
TCTTCTTAGAGAAAGGGGAA+GGG - Chr8:87265972-87265991 None:intergenic 40.0%
TGCCATTAACCATGATGACA+AGG - Chr8:87263857-87263876 None:intergenic 40.0%
TGTATCACGTTTCAGCATCA+TGG + Chr8:87265294-87265313 MsG0880047507.01.T01:intron 40.0%
TTAACCATGATGACAAGGTG+AGG - Chr8:87263852-87263871 None:intergenic 40.0%
TTCTTCTTAGAGAAAGGGGA+AGG - Chr8:87265973-87265992 None:intergenic 40.0%
TTGCTTCTGGATAGATGTGT+GGG - Chr8:87266059-87266078 None:intergenic 40.0%
TTTGAACAACCCCAAAGTAG+AGG + Chr8:87263794-87263813 MsG0880047507.01.T01:CDS 40.0%
TTTGCAGTCACAATTTCTGC+AGG - Chr8:87265123-87265142 None:intergenic 40.0%
! AAAGAAGGGTCGAAGGTTTT+GGG + Chr8:87266475-87266494 MsG0880047507.01.T01:intron 40.0%
! AGAGATTTTGCCGCCTATTT+AGG + Chr8:87264193-87264212 MsG0880047507.01.T01:intron 40.0%
! AGTTCTGCTGATTGGAGATA+TGG + Chr8:87263991-87264010 MsG0880047507.01.T01:intron 40.0%
! CAAAAAGCACAGATGACTGA+TGG - Chr8:87265399-87265418 None:intergenic 40.0%
! CTACAGAGATTTTCTTACGG+TGG - Chr8:87264059-87264078 None:intergenic 40.0%
! CTCTTTTGTGGCACATTCTT+TGG + Chr8:87265028-87265047 MsG0880047507.01.T01:CDS 40.0%
! GAAAACCTACTGGTTGCATT+CGG + Chr8:87269654-87269673 MsG0880047507.01.T02:CDS 40.0%
! GGGTTAATTGTTTCTTGCAC+TGG + Chr8:87269921-87269940 MsG0880047507.01.T02:three_prime_UTR 40.0%
! GTTGCAGAAGATCTCTTTTG+TGG + Chr8:87265016-87265035 MsG0880047507.01.T01:CDS 40.0%
! TGATGAACTGATTCTTGCCA+TGG + Chr8:87268957-87268976 MsG0880047507.01.T01:three_prime_UTR 40.0%
! TTCAAGTTCAAACCCAAGCT+TGG + Chr8:87264144-87264163 MsG0880047507.01.T01:intron 40.0%
! TTCCCCTTTCTCTAAGAAGA+AGG + Chr8:87265972-87265991 MsG0880047507.01.T01:intron 40.0%
! TTTTGTGGGACCTAAATAGG+CGG - Chr8:87264206-87264225 None:intergenic 40.0%
!! AAGTTACAGACCGGTTTTCA+TGG + Chr8:87265675-87265694 MsG0880047507.01.T01:intron 40.0%
!! ACATGTGCTGACTTTGACAT+GGG - Chr8:87267631-87267650 None:intergenic 40.0%
!! ATAACTCCAGCTCTAGATGA+AGG + Chr8:87269525-87269544 MsG0880047507.01.T02:intron 40.0%
!! CGTGAATTGACTTGGTTTGA+GGG + Chr8:87264433-87264452 MsG0880047507.01.T01:intron 40.0%
!! GATCTCTTCTCATCGCTTTT+TGG + Chr8:87263721-87263740 MsG0880047507.01.T01:CDS 40.0%
!! TAACTCCAGCTCTAGATGAA+GGG + Chr8:87269526-87269545 MsG0880047507.01.T02:intron 40.0%
!! TACATGTGCTGACTTTGACA+TGG - Chr8:87267632-87267651 None:intergenic 40.0%
!! TCGTGAATTGACTTGGTTTG+AGG + Chr8:87264432-87264451 MsG0880047507.01.T01:intron 40.0%
!!! GTTTGAGGGTGTAGTTTTGA+CGG + Chr8:87264447-87264466 MsG0880047507.01.T01:intron 40.0%
AAAGAGATCTTCTGCAACCC+AGG - Chr8:87265014-87265033 None:intergenic 45.0%
AACCTACCTCTGCCTTTCTT+TGG + Chr8:87268876-87268895 MsG0880047507.01.T01:three_prime_UTR 45.0%
AAGCAAGCTACCTTCAGCAT+CGG + Chr8:87266154-87266173 MsG0880047507.01.T01:intron 45.0%
AATAATAGGCCGGAATGGTG+GGG + Chr8:87266191-87266210 MsG0880047507.01.T01:intron 45.0%
AATGGAAAGGGAGGGTCTTA+TGG + Chr8:87266233-87266252 MsG0880047507.01.T01:intron 45.0%
ACGAGTACAGCCTATGAAAC+AGG + Chr8:87266295-87266314 MsG0880047507.01.T01:intron 45.0%
ATAATTAGCTCGTGTGGCAG+AGG - Chr8:87267834-87267853 None:intergenic 45.0%
ATGACAAGGTGAGGAGGAAT+GGG - Chr8:87263843-87263862 None:intergenic 45.0%
ATGTTCCGTGCCATGAAAAC+CGG - Chr8:87265688-87265707 None:intergenic 45.0%
ATGTTGACGCCGAATTGATG+AGG - Chr8:87267970-87267989 None:intergenic 45.0%
CAATAATAGGCCGGAATGGT+GGG + Chr8:87266190-87266209 MsG0880047507.01.T01:intron 45.0%
CACATTGTACACACTGAAGG+TGG + Chr8:87268120-87268139 MsG0880047507.01.T01:three_prime_UTR 45.0%
CACCGAATGCTCCTATCTAT+CGG + Chr8:87266096-87266115 MsG0880047507.01.T01:intron 45.0%
CACGATCTTTGCCGATAGAT+AGG - Chr8:87266110-87266129 None:intergenic 45.0%
CAGAAGCAAGTGTAGTTCAC+CGG + Chr8:87266070-87266089 MsG0880047507.01.T01:intron 45.0%
CCACACATTGTACACACTGA+AGG + Chr8:87268117-87268136 MsG0880047507.01.T01:three_prime_UTR 45.0%
CCTACTTCAATGGAAAGGGA+GGG + Chr8:87266225-87266244 MsG0880047507.01.T01:intron 45.0%
CCTCCCTTTCCATTGAAGTA+GGG - Chr8:87266227-87266246 None:intergenic 45.0%
CCTTAATAGTCCACTGTTGG+CGG + Chr8:87266637-87266656 MsG0880047507.01.T01:intron 45.0%
CCTTCAGTGTGTACAATGTG+TGG - Chr8:87268120-87268139 None:intergenic 45.0%
CGACCCTTCTTTCTAAATGG+GGG - Chr8:87266467-87266486 None:intergenic 45.0%
CTCCCTTTCCATTGAAGTAG+GGG - Chr8:87266226-87266245 None:intergenic 45.0%
CTTCTTAGAGAAAGGGGAAG+GGG - Chr8:87265971-87265990 None:intergenic 45.0%
CTTGCTTCTGGATAGATGTG+TGG - Chr8:87266060-87266079 None:intergenic 45.0%
GCACCCCCATTTAGAAAGAA+GGG + Chr8:87266461-87266480 MsG0880047507.01.T01:intron 45.0%
GCGTCAACATGAACTTCCAA+AGG + Chr8:87267980-87267999 MsG0880047507.01.T01:three_prime_UTR 45.0%
GGAACATCCAGCTGAAATTG+TGG - Chr8:87269603-87269622 None:intergenic 45.0%
GGAAGGCCTATGAAGATATC+TGG - Chr8:87266787-87266806 None:intergenic 45.0%
GGCCAGAAAATTGACATGGA+AGG + Chr8:87268186-87268205 MsG0880047507.01.T01:three_prime_UTR 45.0%
GGTATGTTCTTGTAGGAGCT+AGG + Chr8:87268707-87268726 MsG0880047507.01.T01:three_prime_UTR 45.0%
TACTGCTCACAGTACAATCC+AGG + Chr8:87269443-87269462 MsG0880047507.01.T02:CDS 45.0%
TAGCTTTCCGGCAAAACTTG+TGG + Chr8:87269482-87269501 MsG0880047507.01.T02:intron 45.0%
TCAAATGTCCATACCTGCAC+AGG - Chr8:87266808-87266827 None:intergenic 45.0%
TCAATAATAGGCCGGAATGG+TGG + Chr8:87266189-87266208 MsG0880047507.01.T01:intron 45.0%
TCCCTTTCCATTGAAGTAGG+GGG - Chr8:87266225-87266244 None:intergenic 45.0%
TGAACTTGAACCAGTGACCT+TGG - Chr8:87264134-87264153 None:intergenic 45.0%
TGGAGGCCAGAAAATTGACA+TGG + Chr8:87268182-87268201 MsG0880047507.01.T01:three_prime_UTR 45.0%
TGGTTAATGGCATTGTTGGC+AGG + Chr8:87263865-87263884 MsG0880047507.01.T01:CDS 45.0%
TGGTTCAAGAGGACATAGAC+AGG + Chr8:87265244-87265263 MsG0880047507.01.T01:CDS 45.0%
TGTCCTCTTGAACCAAGATG+CGG - Chr8:87265239-87265258 None:intergenic 45.0%
TTCCAAAGAAAGGCAGAGGT+AGG - Chr8:87268881-87268900 None:intergenic 45.0%
TTTGTGGCACATTCTTTGGG+AGG + Chr8:87265032-87265051 MsG0880047507.01.T01:CDS 45.0%
! AAATGCCCTTCATCTAGAGC+TGG - Chr8:87269534-87269553 None:intergenic 45.0%
! GAAAGAAGGGTCGAAGGTTT+TGG + Chr8:87266474-87266493 MsG0880047507.01.T01:intron 45.0%
! GATGGAGCACCTCATCAATT+CGG + Chr8:87267958-87267977 MsG0880047507.01.T01:three_prime_UTR 45.0%
! GGGATTTTTACCGATGCTGA+AGG - Chr8:87266167-87266186 None:intergenic 45.0%
! TCTAGCTTAACCAAGGTCAC+TGG + Chr8:87264121-87264140 MsG0880047507.01.T01:intron 45.0%
! TGCTGATTGGAGATATGGTG+CGG + Chr8:87263996-87264015 MsG0880047507.01.T01:CDS 45.0%
! TTTCATCGTCGACGATTTGG+AGG + Chr8:87263759-87263778 MsG0880047507.01.T01:CDS 45.0%
!! ACATGTGGCTTTTGTTTGGG+AGG - Chr8:87263449-87263468 None:intergenic 45.0%
!! ACTTGGATTAGTCGGTCCTT+GGG + Chr8:87269096-87269115 MsG0880047507.01.T01:three_prime_UTR 45.0%
!! GCTCTCTTCTAGCTTAACCA+AGG + Chr8:87264114-87264133 MsG0880047507.01.T01:intron 45.0%
!! TGCCGATAGATAGGAGCATT+CGG - Chr8:87266101-87266120 None:intergenic 45.0%
!! TGGCTCTAAACCAGCAATTC+TGG - Chr8:87265192-87265211 None:intergenic 45.0%
!!! GGCTAGCTGAAGAGGTATTT+TGG + Chr8:87264821-87264840 MsG0880047507.01.T01:intron 45.0%
AAGATCGTGTGAGTGTGCAG+TGG + Chr8:87266121-87266140 MsG0880047507.01.T01:intron 50.0%
ACCAACCACCCAAGGTTCAA+TGG - Chr8:87268685-87268704 None:intergenic 50.0%
ACCATCCGAATGCAACCAGT+AGG - Chr8:87269662-87269681 None:intergenic 50.0%
ACCATGATGACAAGGTGAGG+AGG - Chr8:87263849-87263868 None:intergenic 50.0%
AGATCGTGTGAGTGTGCAGT+GGG + Chr8:87266122-87266141 MsG0880047507.01.T01:intron 50.0%
AGGCATAGAGTCCGTGTAGT+CGG + Chr8:87266267-87266286 MsG0880047507.01.T01:intron 50.0%
ATGTCCATACCTGCACAGGA+AGG - Chr8:87266804-87266823 None:intergenic 50.0%
CAAGGACCGACTAATCCAAG+TGG - Chr8:87269097-87269116 None:intergenic 50.0%
CAGAATCCTCAGTCATTCGG+AGG - Chr8:87267328-87267347 None:intergenic 50.0%
CATACCATACCAACCACCCA+AGG - Chr8:87268693-87268712 None:intergenic 50.0%
CCCCCCTACTTCAATGGAAA+GGG + Chr8:87266221-87266240 MsG0880047507.01.T01:intron 50.0%
CCCTACTTCAATGGAAAGGG+AGG + Chr8:87266224-87266243 MsG0880047507.01.T01:intron 50.0%
CCCTCCCTTTCCATTGAAGT+AGG - Chr8:87266228-87266247 None:intergenic 50.0%
CCCTTTCCATTGAAGTAGGG+GGG - Chr8:87266224-87266243 None:intergenic 50.0%
CGGTGAACTACACTTGCTTC+TGG - Chr8:87266072-87266091 None:intergenic 50.0%
CGGTGGACGATGACTTTATC+TGG - Chr8:87264042-87264061 None:intergenic 50.0%
CTGATTCAGCTTCCGCTTCT+GGG - Chr8:87266580-87266599 None:intergenic 50.0%
GAATCTCGTATCCTGACCCA+AGG - Chr8:87269115-87269134 None:intergenic 50.0%
GAGTTTATTGACAGCCCTGC+AGG + Chr8:87267800-87267819 MsG0880047507.01.T01:three_prime_UTR 50.0%
GATGACAAGGTGAGGAGGAA+TGG - Chr8:87263844-87263863 None:intergenic 50.0%
GATGATAAGGGGTCTCACTC+AGG + Chr8:87269371-87269390 MsG0880047507.01.T02:CDS 50.0%
GCGCATCTCTATAGATCCCA+AGG - Chr8:87266371-87266390 None:intergenic 50.0%
GGCACCCCCATTTAGAAAGA+AGG + Chr8:87266460-87266479 MsG0880047507.01.T01:intron 50.0%
GGGTCTCACTCAGGTTCAAT+GGG + Chr8:87269380-87269399 MsG0880047507.01.T02:CDS 50.0%
TAACCAGAAAGGGCTCGACT+TGG + Chr8:87266426-87266445 MsG0880047507.01.T01:intron 50.0%
TCAGGTTCAATGGGAACGTG+TGG + Chr8:87269389-87269408 MsG0880047507.01.T02:CDS 50.0%
TCAGTCATTCGGAGGAGAAG+AGG - Chr8:87267320-87267339 None:intergenic 50.0%
TCCATTGAACCTTGGGTGGT+TGG + Chr8:87268681-87268700 MsG0880047507.01.T01:three_prime_UTR 50.0%
TCCGTTTGATCTCCCAGAAG+CGG + Chr8:87266565-87266584 MsG0880047507.01.T01:intron 50.0%
TCCTCCTCACCTTGTCATCA+TGG + Chr8:87263845-87263864 MsG0880047507.01.T01:CDS 50.0%
TCTTCTCCTCCGAATGACTG+AGG + Chr8:87267319-87267338 MsG0880047507.01.T01:CDS 50.0%
TTCCATCATCGTTGTCCGTG+AGG - Chr8:87267292-87267311 None:intergenic 50.0%
TTCCTCACGGACAACGATGA+TGG + Chr8:87267287-87267306 MsG0880047507.01.T01:CDS 50.0%
! ACATTCTTTGGGAGGCTTGG+TGG + Chr8:87265040-87265059 MsG0880047507.01.T01:CDS 50.0%
! ACCTACTGGTTGCATTCGGA+TGG + Chr8:87269658-87269677 MsG0880047507.01.T02:CDS 50.0%
! ACTCGTACTCACCGACTACA+CGG - Chr8:87266281-87266300 None:intergenic 50.0%
! ACTGATTCAGCTTCCGCTTC+TGG - Chr8:87266581-87266600 None:intergenic 50.0%
! GAAAGGGAGGGTCTTATGGA+GGG + Chr8:87266237-87266256 MsG0880047507.01.T01:intron 50.0%
! GTGTTGATACCATGGGTGAG+AGG + Chr8:87264800-87264819 MsG0880047507.01.T01:CDS 50.0%
! TCCGCTTCTGGGAGATCAAA+CGG - Chr8:87266569-87266588 None:intergenic 50.0%
! TGAACCTTGGGTGGTTGGTA+TGG + Chr8:87268686-87268705 MsG0880047507.01.T01:three_prime_UTR 50.0%
!! ACAGACCGGTTTTCATGGCA+CGG + Chr8:87265680-87265699 MsG0880047507.01.T01:intron 50.0%
!! ATAGGAGCATTCGGTGGAAC+CGG - Chr8:87266092-87266111 None:intergenic 50.0%
!! CACTTGGATTAGTCGGTCCT+TGG + Chr8:87269095-87269114 MsG0880047507.01.T01:three_prime_UTR 50.0%
!! CCGCCAACAGTGGACTATTA+AGG - Chr8:87266640-87266659 None:intergenic 50.0%
!! CGATAGATAGGAGCATTCGG+TGG - Chr8:87266098-87266117 None:intergenic 50.0%
!! TCGAGCCCTTTCTGGTTACA+GGG - Chr8:87266424-87266443 None:intergenic 50.0%
ACAGAAGTGACGAGCAGTCG+CGG - Chr8:87265814-87265833 None:intergenic 55.0%
ACCCAAGCTTGGACAGACAG+CGG + Chr8:87264155-87264174 MsG0880047507.01.T01:intron 55.0%
ACGCCGCATCTTGGTTCAAG+AGG + Chr8:87265233-87265252 MsG0880047507.01.T01:CDS 55.0%
ATCTCTTGATTCCTCGCGGC+CGG + Chr8:87265878-87265897 MsG0880047507.01.T01:intron 55.0%
CTTCATAGGCCTTCCTGTGC+AGG + Chr8:87266792-87266811 MsG0880047507.01.T01:intron 55.0%
GCCCCCCTACTTCAATGGAA+AGG + Chr8:87266220-87266239 MsG0880047507.01.T01:intron 55.0%
GCGGAAGCTGAATCAGTTGC+AGG + Chr8:87266584-87266603 MsG0880047507.01.T01:intron 55.0%
GGGGTCTCACTCAGGTTCAA+TGG + Chr8:87269379-87269398 MsG0880047507.01.T02:CDS 55.0%
GTCATTCGGAGGAGAAGAGG+AGG - Chr8:87267317-87267336 None:intergenic 55.0%
GTGCGGAGCAGTTTCTCAAG+AGG + Chr8:87264013-87264032 MsG0880047507.01.T01:CDS 55.0%
TAGGCCTTCCTGTGCAGGTA+TGG + Chr8:87266797-87266816 MsG0880047507.01.T01:intron 55.0%
TCTATTGTCAGACGCTGGCC+TGG + Chr8:87264993-87265012 MsG0880047507.01.T01:CDS 55.0%
TCTTGAACCAAGATGCGGCG+TGG - Chr8:87265234-87265253 None:intergenic 55.0%
TGACCAAGTCGAGCCCTTTC+TGG - Chr8:87266432-87266451 None:intergenic 55.0%
! CTATTGTCAGACGCTGGCCT+GGG + Chr8:87264994-87265013 MsG0880047507.01.T01:CDS 55.0%
! GATTAGTCGGTCCTTGGGTC+AGG + Chr8:87269101-87269120 MsG0880047507.01.T01:three_prime_UTR 55.0%
! GGAAAGGGAGGGTCTTATGG+AGG + Chr8:87266236-87266255 MsG0880047507.01.T01:intron 55.0%
! GGCACATTCTTTGGGAGGCT+TGG + Chr8:87265037-87265056 MsG0880047507.01.T01:CDS 55.0%
! TTCAGCTAGCCTCTCACCCA+TGG - Chr8:87264812-87264831 None:intergenic 55.0%
!! AAAAGCACCACCCGACGAAG+GGG - Chr8:87266520-87266539 None:intergenic 55.0%
!! AAGGGCTCGACTTGGTCAGA+TGG + Chr8:87266434-87266453 MsG0880047507.01.T01:intron 55.0%
!! AGAAAAGCACCACCCGACGA+AGG - Chr8:87266522-87266541 None:intergenic 55.0%
!! AGGGCTCGACTTGGTCAGAT+GGG + Chr8:87266435-87266454 MsG0880047507.01.T01:intron 55.0%
!! CAGGGTGAGCCTTCGCTTTT+TGG + Chr8:87266025-87266044 MsG0880047507.01.T01:intron 55.0%
!! CAGGTAGCTTGCTTCCAAGC+CGG - Chr8:87265905-87265924 None:intergenic 55.0%
!! CTCGACTTGGTCAGATGGGT+GGG + Chr8:87266439-87266458 MsG0880047507.01.T01:intron 55.0%
!! CTGACTTGGATCTCGGGTGA+CGG - Chr8:87265847-87265866 None:intergenic 55.0%
!! GAAAAGCACCACCCGACGAA+GGG - Chr8:87266521-87266540 None:intergenic 55.0%
!! GATCTTTGCCGGTGCTGACT+TGG - Chr8:87265861-87265880 None:intergenic 55.0%
!! GGATCTCGGGTGACGGAAAA+AGG - Chr8:87265840-87265859 None:intergenic 55.0%
!! GTCGAGCCCTTTCTGGTTAC+AGG - Chr8:87266425-87266444 None:intergenic 55.0%
AAGGGGGTGAGATAGGCGAC+AGG - Chr8:87265924-87265943 None:intergenic 60.0%
ACCAAGATGCGGCGTGGCAA+AGG - Chr8:87265228-87265247 None:intergenic 60.0%
ACCTTTGCCACGCCGCATCT+TGG + Chr8:87265224-87265243 MsG0880047507.01.T01:CDS 60.0%
ACTGCCGATCGCCTTCAGCA+GGG + Chr8:87266007-87266026 MsG0880047507.01.T01:intron 60.0%
AGGAGGCCCCCCTACTTCAA+TGG + Chr8:87266215-87266234 MsG0880047507.01.T01:intron 60.0%
CCCGAGATCCAAGTCAGCAC+CGG + Chr8:87265850-87265869 MsG0880047507.01.T01:intron 60.0%
CTCACCCTGCTGAAGGCGAT+CGG - Chr8:87266014-87266033 None:intergenic 60.0%
CTGAAGGCGATCGGCAGTGA+GGG - Chr8:87266005-87266024 None:intergenic 60.0%
GCCGCTGTCTGTCCAAGCTT+GGG - Chr8:87264159-87264178 None:intergenic 60.0%
GTCTTATGGAGGGAGGGGGA+AGG + Chr8:87266247-87266266 MsG0880047507.01.T01:intron 60.0%
TCGTGTGAGTGTGCAGTGGG+TGG + Chr8:87266125-87266144 MsG0880047507.01.T01:intron 60.0%
TCTCTTGATTCCTCGCGGCC+GGG + Chr8:87265879-87265898 MsG0880047507.01.T01:intron 60.0%
TGAGTGTGCAGTGGGTGGCT+TGG + Chr8:87266130-87266149 MsG0880047507.01.T01:intron 60.0%
! AAAGCACCACCCGACGAAGG+GGG - Chr8:87266519-87266538 None:intergenic 60.0%
! AGGGAGGGTCTTATGGAGGG+AGG + Chr8:87266240-87266259 MsG0880047507.01.T01:intron 60.0%
! ATAGGCCGGAATGGTGGGGA+AGG + Chr8:87266195-87266214 MsG0880047507.01.T01:intron 60.0%
! CTCGTGTGGCAGAGGAGCAT+GGG - Chr8:87267826-87267845 None:intergenic 60.0%
! GAGGGTCTTATGGAGGGAGG+GGG + Chr8:87266243-87266262 MsG0880047507.01.T01:intron 60.0%
! GGAGGGTCTTATGGAGGGAG+GGG + Chr8:87266242-87266261 MsG0880047507.01.T01:intron 60.0%
! GGGAGGGTCTTATGGAGGGA+GGG + Chr8:87266241-87266260 MsG0880047507.01.T01:intron 60.0%
! GGGTGAGAGGCTAGCTGAAG+AGG + Chr8:87264813-87264832 MsG0880047507.01.T01:CDS 60.0%
!! CCGGTGCTGACTTGGATCTC+GGG - Chr8:87265853-87265872 None:intergenic 60.0%
!! GCCGGTGCTGACTTGGATCT+CGG - Chr8:87265854-87265873 None:intergenic 60.0%
!! GCTCGACTTGGTCAGATGGG+TGG + Chr8:87266438-87266457 MsG0880047507.01.T01:intron 60.0%
AAGCACCACCCGACGAAGGG+GGG - Chr8:87266518-87266537 None:intergenic 65.0%
CACTGCCGATCGCCTTCAGC+AGG + Chr8:87266006-87266025 MsG0880047507.01.T01:intron 65.0%
CGCCGCTGTCTGTCCAAGCT+TGG - Chr8:87264160-87264179 None:intergenic 65.0%
GCGAAGGCTCACCCTGCTGA+AGG - Chr8:87266021-87266040 None:intergenic 65.0%
GCTCGTGTGGCAGAGGAGCA+TGG - Chr8:87267827-87267846 None:intergenic 65.0%
GCTGAAGGCGATCGGCAGTG+AGG - Chr8:87266006-87266025 None:intergenic 65.0%
GGCCTCCTTCCCCACCATTC+CGG - Chr8:87266203-87266222 None:intergenic 65.0%
TTTCCCCGTCCCCCCTTCGT+CGG + Chr8:87266506-87266525 MsG0880047507.01.T01:intron 65.0%
! AGCTTGCTTCCAAGCCGGCC+CGG - Chr8:87265900-87265919 None:intergenic 65.0%
! CAGAGGAGCATGGGCCTGCA+GGG - Chr8:87267817-87267836 None:intergenic 65.0%
ACCACCCGACGAAGGGGGGA+CGG - Chr8:87266514-87266533 None:intergenic 70.0%
GGGGGGACGGGGAAAGCTAC+AGG - Chr8:87266501-87266520 None:intergenic 70.0%
TTCCCCGTCCCCCCTTCGTC+GGG + Chr8:87266507-87266526 MsG0880047507.01.T01:intron 70.0%
TTGATTCCTCGCGGCCGGGC+CGG + Chr8:87265883-87265902 MsG0880047507.01.T01:intron 70.0%
! GCAGAGGAGCATGGGCCTGC+AGG - Chr8:87267818-87267837 None:intergenic 70.0%
! GGCCGGAATGGTGGGGAAGG+AGG + Chr8:87266198-87266217 MsG0880047507.01.T01:intron 70.0%
CACCCGACGAAGGGGGGACG+GGG - Chr8:87266512-87266531 None:intergenic 75.0%
CCACCCGACGAAGGGGGGAC+GGG - Chr8:87266513-87266532 None:intergenic 75.0%
! CCCGTCCCCCCTTCGTCGGG+TGG + Chr8:87266510-87266529 MsG0880047507.01.T01:intron 80.0%
! TCCAAGCCGGCCCGGCCGCG+AGG - Chr8:87265892-87265911 None:intergenic 85.0%
! TCCTCGCGGCCGGGCCGGCT+TGG + Chr8:87265888-87265907 MsG0880047507.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr8 gene 87263009 87269999 87263009 ID=MsG0880047507.01;Name=MsG0880047507.01
Chr8 mRNA 87263009 87269130 87263009 ID=MsG0880047507.01.T01;Parent=MsG0880047507.01;Name=MsG0880047507.01.T01;_AED=0.29;_eAED=0.29;_QI=615|1|0.85|1|0.66|0.71|7|1518|306
Chr8 exon 87263009 87263886 87263009 ID=MsG0880047507.01.T01:exon:15707;Parent=MsG0880047507.01.T01
Chr8 exon 87263993 87264060 87263993 ID=MsG0880047507.01.T01:exon:15708;Parent=MsG0880047507.01.T01
Chr8 exon 87264764 87264834 87264764 ID=MsG0880047507.01.T01:exon:15709;Parent=MsG0880047507.01.T01
Chr8 exon 87264987 87265265 87264987 ID=MsG0880047507.01.T01:exon:15710;Parent=MsG0880047507.01.T01
Chr8 exon 87267200 87267363 87267200 ID=MsG0880047507.01.T01:exon:15711;Parent=MsG0880047507.01.T01
Chr8 exon 87267477 87267646 87267477 ID=MsG0880047507.01.T01:exon:15712;Parent=MsG0880047507.01.T01
Chr8 exon 87267707 87269130 87267707 ID=MsG0880047507.01.T01:exon:15713;Parent=MsG0880047507.01.T01
Chr8 five_prime_UTR 87263009 87263623 87263009 ID=MsG0880047507.01.T01:five_prime_utr;Parent=MsG0880047507.01.T01
Chr8 CDS 87263624 87263886 87263624 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 CDS 87263993 87264060 87263993 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 CDS 87264764 87264834 87264764 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 CDS 87264987 87265265 87264987 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 CDS 87267200 87267363 87267200 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 CDS 87267477 87267552 87267477 ID=MsG0880047507.01.T01:cds;Parent=MsG0880047507.01.T01
Chr8 three_prime_UTR 87267553 87267646 87267553 ID=MsG0880047507.01.T01:three_prime_utr;Parent=MsG0880047507.01.T01
Chr8 three_prime_UTR 87267707 87269130 87267707 ID=MsG0880047507.01.T01:three_prime_utr;Parent=MsG0880047507.01.T01
Chr8 mRNA 87267933 87269999 87267933 ID=MsG0880047507.01.T02;Parent=MsG0880047507.01;Name=MsG0880047507.01.T02;_AED=0.46;_eAED=0.46;_QI=0|1|0.8|1|0.75|0.6|5|247|119
Chr8 exon 87267933 87268001 87267933 ID=MsG0880047507.01.T02:exon:15714;Parent=MsG0880047507.01.T02
Chr8 exon 87268087 87268207 87268087 ID=MsG0880047507.01.T02:exon:15715;Parent=MsG0880047507.01.T02
Chr8 exon 87269367 87269464 87269367 ID=MsG0880047507.01.T02:exon:15716;Parent=MsG0880047507.01.T02
Chr8 exon 87269652 87269884 87269652 ID=MsG0880047507.01.T02:exon:15717;Parent=MsG0880047507.01.T02
Chr8 exon 87269914 87269999 87269914 ID=MsG0880047507.01.T02:exon:15718;Parent=MsG0880047507.01.T02
Chr8 CDS 87267933 87268001 87267933 ID=MsG0880047507.01.T02:cds;Parent=MsG0880047507.01.T02
Chr8 CDS 87268087 87268207 87268087 ID=MsG0880047507.01.T02:cds;Parent=MsG0880047507.01.T02
Chr8 CDS 87269367 87269464 87269367 ID=MsG0880047507.01.T02:cds;Parent=MsG0880047507.01.T02
Chr8 CDS 87269652 87269723 87269652 ID=MsG0880047507.01.T02:cds;Parent=MsG0880047507.01.T02
Chr8 three_prime_UTR 87269724 87269884 87269724 ID=MsG0880047507.01.T02:three_prime_utr;Parent=MsG0880047507.01.T02
Chr8 three_prime_UTR 87269914 87269999 87269914 ID=MsG0880047507.01.T02:three_prime_utr;Parent=MsG0880047507.01.T02
Gene Sequence

>MsG0880047507.01.T01

ATGAATTCGTTTCTGGTTTGGGCTCTGAGCTTTGCGATCATTATCGCGATTGTTCGCTTCAACTTCAACCTTACGCCATCATCATCATTATTATTTGGATCTCTTCTCATCGCTTTTTGGATTATCAAAATGAAATTTCATCGTCGACGATTTGGAGGAAGTTGTTTAAATTTGAACAACCCCAAAGTAGAGGATAATAGTGCTGATGCTAACAATCCCATTCCTCCTCACCTTGTCATCATGGTTAATGGCATTGTTGGCAGTTCTGCTGATTGGAGATATGGTGCGGAGCAGTTTCTCAAGAGGCTTCCAGATAAAGTCATCGTCCACCGCAGTGAATGCAATTCTTCAAAATTGACATTTGATGGTGTTGATACCATGGGTGAGAGGCTAGCTGAAGAGGTACTATCTATTGTCAGACGCTGGCCTGGGTTGCAGAAGATCTCTTTTGTGGCACATTCTTTGGGAGGCTTGGTGGCAAGATATGCTATTGCCAGACTTTTTGATTACTCTAAAACATTAGAAGCCGAAGTTACCTGCAGAAATTGTGACTGCAAAGAGGAGACAGAATGTACGAAGAATTGCACAAAACAACATTATGAAGCCAGAATTGCTGGTTTAGAGCCAATGAACTTTATAACCTTTGCCACGCCGCATCTTGGTTCAAGAGGACATAGACAGCTTCCATTTCTTTGTGGCATTCCTTTCCTTGAAAGAAGAGCATCTCAAACTGCACATTTAATTGTAGGGAGAACTGGTAAACATCTTTTCCTCACGGACAACGATGATGGAAAGCCTCCTCTTCTCCTCCGAATGACTGAGGATTCTGATGATTTAAAATTTTTGTCAGCTTTATGTGTGTTTAAGCGCCGAGTAGCATATGCAAATGCAAACTTTGATCGTATCCTCTATTCAAATTAG

>MsG0880047507.01.T02

TTGACTTGTGTTGAAGATATGGTTGGATGGAGCACCTCATCAATTCGGCGTCAACATGAACTTCCAAAGTCTAATCTTCTAGTAATTGATGAGAAATACCCACACATTGTACACACTGAAGGTGGGACTGTTGATGATATTTCCAACAAAGCATCTATTAACGTTGGAGGCCAGAAAATTGACATGGAAGAGGAGATGATAAGGGGTCTCACTCAGGTTCAATGGGAACGTGTGGATGTTAGCTTTCAGAAGAGTAAACAGCGGTATACTGCTCACAGTACAATCCAGGTGAAAACCTACTGGTTGCATTCGGATGGTTCTGATGTGATCTTTCACATGATAGATAACTTCCTTATCTAG
Protein sequence

>MsG0880047507.01.T01

MNSFLVWALSFAIIIAIVRFNFNLTPSSSLLFGSLLIAFWIIKMKFHRRRFGGSCLNLNNPKVEDNSADANNPIPPHLVIMVNGIVGSSADWRYGAEQFLKRLPDKVIVHRSECNSSKLTFDGVDTMGERLAEEVLSIVRRWPGLQKISFVAHSLGGLVARYAIARLFDYSKTLEAEVTCRNCDCKEETECTKNCTKQHYEARIAGLEPMNFITFATPHLGSRGHRQLPFLCGIPFLERRASQTAHLIVGRTGKHLFLTDNDDGKPPLLLRMTEDSDDLKFLSALCVFKRRVAYANANFDRILYSN*

>MsG0880047507.01.T02

LTCVEDMVGWSTSSIRRQHELPKSNLLVIDEKYPHIVHTEGGTVDDISNKASINVGGQKIDMEEEMIRGLTQVQWERVDVSFQKSKQRYTAHSTIQVKTYWLHSDGSDVIFHMIDNFLI*