Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047550.01.T01 | KEH32590.1 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 7.95E-78 | 238 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047550.01.T01 | A0A072V362 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 3.80e-78 | 238 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0880047550.01 | MsG0880047551.01 | 0.875493 | 2.951493e-68 | 1.380684e-64 |
MsG0580030060.01 | MsG0880047550.01 | 0.809240 | 2.086420e-50 | 1.218605e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880047550.01.T01 | MTR_4g129760 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 9.63e-82 | 238 |
MsG0880047550.01.T01 | MTR_4g129770 | 93.103 | 29 | 2 | 0 | 1 | 29 | 1 | 29 | 1.01e-13 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 85 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTCATCATCTTCTAGTTC+TGG | 0.219198 | 8:+87995708 | MsG0880047550.01.T01:CDS |
GCAGGAGTTGGTTTGGGAAT+TGG | 0.232769 | 8:+87995612 | MsG0880047550.01.T01:CDS |
GGAGGAGGAGGTGGAGGCTC+TGG | 0.244452 | 8:+87995855 | MsG0880047550.01.T01:CDS |
TCTAGTTCTGGGTCTGGTTC+CGG | 0.249223 | 8:+87995720 | MsG0880047550.01.T01:CDS |
GGTGGAGGTGGCGGTGGAGG+AGG | 0.256095 | 8:+87995840 | MsG0880047550.01.T01:CDS |
CTAGTTCTGGGTCTGGTTCC+GGG | 0.259670 | 8:+87995721 | MsG0880047550.01.T01:CDS |
GGTGGTGGAGGTGGCGGTGG+AGG | 0.267855 | 8:+87995837 | MsG0880047550.01.T01:CDS |
GGTGGCGGTGGAGGAGGAGG+TGG | 0.275913 | 8:+87995846 | MsG0880047550.01.T01:CDS |
CAGAGTGGCTAGGAAGGATT+TGG | 0.278376 | 8:+87995554 | MsG0880047550.01.T01:CDS |
CTTGGTGCAGGAGTTGGTTT+GGG | 0.282886 | 8:+87995606 | MsG0880047550.01.T01:CDS |
TTTACTTGCACTACTTGTTT+TGG | 0.283234 | 8:+87995509 | MsG0880047550.01.T01:CDS |
GCCGGTGCAGGCTCTGGTTC+TGG | 0.292529 | 8:+87995660 | MsG0880047550.01.T01:CDS |
GGAGGTGGTGGAGGTGGCGG+TGG | 0.294910 | 8:+87995834 | MsG0880047550.01.T01:CDS |
TCTGGGCAGGGCTCTGGTTA+TGG | 0.295227 | 8:+87995873 | MsG0880047550.01.T01:CDS |
GGAGGCTCTGGGCAGGGCTC+TGG | 0.298439 | 8:+87995867 | MsG0880047550.01.T01:CDS |
GACCTTGGTGGATTGGGAAT+TGG | 0.303942 | 8:+87995582 | MsG0880047550.01.T01:CDS |
GGTTTGGACCTTGGTGGATT+GGG | 0.305506 | 8:+87995576 | MsG0880047550.01.T01:CDS |
GGAGGTGGCGGTGGAGGAGG+AGG | 0.313425 | 8:+87995843 | MsG0880047550.01.T01:CDS |
TCTGGGTCTGGTTCCGGGGC+AGG | 0.320853 | 8:+87995726 | MsG0880047550.01.T01:CDS |
AGGAGGTGGAGGCTCTGGGC+AGG | 0.327873 | 8:+87995860 | MsG0880047550.01.T01:CDS |
GGCGGTGGAGGAGGTGGTGG+AGG | 0.336757 | 8:+87995825 | MsG0880047550.01.T01:CDS |
TCTGGTTATGGCGAGGGTTA+TGG | 0.338296 | 8:+87995885 | MsG0880047550.01.T01:CDS |
CGTGGTGGCGGTGGAGGAGG+TGG | 0.342932 | 8:+87995819 | MsG0880047550.01.T01:CDS |
GCAGGCTCTCGGGCTGGTTC+AGG | 0.343637 | 8:+87995768 | MsG0880047550.01.T01:CDS |
GGTGGCGGTGGAGGAGGTGG+TGG | 0.345673 | 8:+87995822 | MsG0880047550.01.T01:CDS |
GGTCGTGGTGGCGGTGGAGG+AGG | 0.346060 | 8:+87995816 | MsG0880047550.01.T01:CDS |
TCTCGGGCTGGTTCAGGATC+AGG | 0.347584 | 8:+87995774 | MsG0880047550.01.T01:CDS |
GGTGGTAGTGGCTCTGGAGC+TGG | 0.348332 | 8:+87995636 | MsG0880047550.01.T01:CDS |
GGTGGTCGTGGTGGCGGTGG+AGG | 0.360471 | 8:+87995813 | MsG0880047550.01.T01:CDS |
ACTTGGTGCAGGAGTTGGTT+TGG | 0.360857 | 8:+87995605 | MsG0880047550.01.T01:CDS |
GGCGGTGGAGGAGGAGGTGG+AGG | 0.367264 | 8:+87995849 | MsG0880047550.01.T01:CDS |
CCTCATCATCTTCTAGTTCT+GGG | 0.369328 | 8:+87995709 | MsG0880047550.01.T01:CDS |
TCTGGAGCTGGAGCCGGTGC+AGG | 0.370281 | 8:+87995648 | MsG0880047550.01.T01:CDS |
GGCTAGGAAGGATTTGGGTT+TGG | 0.372485 | 8:+87995560 | MsG0880047550.01.T01:CDS |
GGTGGAGGAGGTGGTGGAGG+TGG | 0.374685 | 8:+87995828 | MsG0880047550.01.T01:CDS |
GGAGGAGGTGGTGGAGGTGG+CGG | 0.378876 | 8:+87995831 | MsG0880047550.01.T01:CDS |
ATTGGAGGTGGTAGTGGCTC+TGG | 0.380087 | 8:+87995630 | MsG0880047550.01.T01:CDS |
GGGTTTGGACCTTGGTGGAT+TGG | 0.387616 | 8:+87995575 | MsG0880047550.01.T01:CDS |
GGTGGATTGGGAATTGGACT+TGG | 0.393450 | 8:+87995588 | MsG0880047550.01.T01:CDS |
TTGGGAATTGGAGGTGGTAG+TGG | 0.394926 | 8:+87995624 | MsG0880047550.01.T01:CDS |
GAGGAGGAGGTGGAGGCTCT+GGG | 0.397806 | 8:+87995856 | MsG0880047550.01.T01:CDS |
AAGGATTTGGGTTTGGACCT+TGG | 0.398569 | 8:+87995567 | MsG0880047550.01.T01:CDS |
GGAGTTGGTTTGGGAATTGG+AGG | 0.401347 | 8:+87995615 | MsG0880047550.01.T01:CDS |
GCTGGAGCCGGTGCAGGCTC+TGG | 0.401781 | 8:+87995654 | MsG0880047550.01.T01:CDS |
CGCGGTGGTGGTCGTGGTGG+CGG | 0.402098 | 8:+87995807 | MsG0880047550.01.T01:CDS |
TCCGGGGCAGGGTCGGAAGC+AGG | 0.407469 | 8:+87995738 | MsG0880047550.01.T01:CDS |
GTCTGGTTCCGGGGCAGGGT+CGG | 0.409940 | 8:+87995731 | MsG0880047550.01.T01:CDS |
CTGGGTCTGGTTCCGGGGCA+GGG | 0.418058 | 8:+87995727 | MsG0880047550.01.T01:CDS |
ATTGGACTTGGTGCAGGAGT+TGG | 0.433770 | 8:+87995600 | MsG0880047550.01.T01:CDS |
TCATCTTCTAGTTCTGGGTC+TGG | 0.435553 | 8:+87995714 | MsG0880047550.01.T01:CDS |
GGAGGTGGAGGCTCTGGGCA+GGG | 0.442151 | 8:+87995861 | MsG0880047550.01.T01:CDS |
GAGGGTTATGGTCATGGTGG+GGG | 0.442197 | 8:+87995897 | MsG0880047550.01.T01:CDS |
CGAGGGTTATGGTCATGGTG+GGG | 0.442312 | 8:+87995896 | MsG0880047550.01.T01:CDS |
GGCGAGGGTTATGGTCATGG+TGG | 0.449337 | 8:+87995894 | MsG0880047550.01.T01:CDS |
CAGGCTCATATGCAGGCTCT+CGG | 0.458821 | 8:+87995757 | MsG0880047550.01.T01:CDS |
TTGGGAATTGGACTTGGTGC+AGG | 0.468502 | 8:+87995594 | MsG0880047550.01.T01:CDS |
AGAAGTCGCGGTGGTGGTCG+TGG | 0.471629 | 8:+87995801 | MsG0880047550.01.T01:CDS |
AGTGGCTCTGGAGCTGGAGC+CGG | 0.477935 | 8:+87995642 | MsG0880047550.01.T01:CDS |
AGAGTGGCTAGGAAGGATTT+GGG | 0.484368 | 8:+87995555 | MsG0880047550.01.T01:CDS |
GCCTGCTTCCGACCCTGCCC+CGG | 0.485604 | 8:-87995739 | None:intergenic |
GTTGGTTTGGGAATTGGAGG+TGG | 0.486237 | 8:+87995618 | MsG0880047550.01.T01:CDS |
GATTTGGGTTTGGACCTTGG+TGG | 0.487099 | 8:+87995570 | MsG0880047550.01.T01:CDS |
GGTGGTGGTCGTGGTGGCGG+TGG | 0.490750 | 8:+87995810 | MsG0880047550.01.T01:CDS |
AGGCTCATATGCAGGCTCTC+GGG | 0.505425 | 8:+87995758 | MsG0880047550.01.T01:CDS |
GCGAGGGTTATGGTCATGGT+GGG | 0.516009 | 8:+87995895 | MsG0880047550.01.T01:CDS |
GGTGGTAGAAGTCGCGGTGG+TGG | 0.518355 | 8:+87995795 | MsG0880047550.01.T01:CDS |
TCGGAAGCAGGCTCATATGC+AGG | 0.520347 | 8:+87995750 | MsG0880047550.01.T01:CDS |
TCATATGCAGGCTCTCGGGC+TGG | 0.520510 | 8:+87995762 | MsG0880047550.01.T01:CDS |
AGAAAGCAGAGTGGCTAGGA+AGG | 0.521874 | 8:+87995548 | MsG0880047550.01.T01:CDS |
CAGGGCTCTGGTTATGGCGA+GGG | 0.533964 | 8:+87995879 | MsG0880047550.01.T01:CDS |
TATGGCGAGGGTTATGGTCA+TGG | 0.537691 | 8:+87995891 | MsG0880047550.01.T01:CDS |
TAGTTCTGGGTCTGGTTCCG+GGG | 0.559873 | 8:+87995722 | MsG0880047550.01.T01:CDS |
GCAGGGCTCTGGTTATGGCG+AGG | 0.576034 | 8:+87995878 | MsG0880047550.01.T01:CDS |
AATCAGAAAGCAGAGTGGCT+AGG | 0.580806 | 8:+87995544 | MsG0880047550.01.T01:CDS |
TGATGAGGACGATGAACTTG+AGG | 0.597140 | 8:-87995694 | None:intergenic |
CTACAATAATGGCTGCACCT+TGG | 0.598690 | 8:+87995478 | None:intergenic |
ACCAGAACCAGAGCCTGCAC+CGG | 0.601328 | 8:-87995661 | None:intergenic |
CCCAGAACTAGAAGATGATG+AGG | 0.614268 | 8:-87995709 | None:intergenic |
CGGGCTGGTTCAGGATCAGG+TGG | 0.622498 | 8:+87995777 | MsG0880047550.01.T01:CDS |
AGTCGCGGTGGTGGTCGTGG+TGG | 0.635861 | 8:+87995804 | MsG0880047550.01.T01:CDS |
GGATCAGGTGGTAGAAGTCG+CGG | 0.642539 | 8:+87995789 | MsG0880047550.01.T01:CDS |
GCAAGTAAACAACACGACCA+AGG | 0.677941 | 8:-87995495 | None:intergenic |
GTCCAATTCCCAATCCACCA+AGG | 0.692829 | 8:-87995584 | None:intergenic |
TCAGGTGGTAGAAGTCGCGG+TGG | 0.714713 | 8:+87995792 | MsG0880047550.01.T01:CDS |
TATTGAATCAGAAAGCAGAG+TGG | 0.753468 | 8:+87995539 | MsG0880047550.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TTTACTTGCACTACTTGTTT+TGG | + | Chr8:87995509-87995528 | MsG0880047550.01.T01:CDS | 30.0% |
TATTGAATCAGAAAGCAGAG+TGG | + | Chr8:87995539-87995558 | MsG0880047550.01.T01:CDS | 35.0% | |
!! | CCTCATCATCTTCTAGTTCT+GGG | + | Chr8:87995709-87995728 | MsG0880047550.01.T01:CDS | 40.0% |
!! | TCCTCATCATCTTCTAGTTC+TGG | + | Chr8:87995708-87995727 | MsG0880047550.01.T01:CDS | 40.0% |
AATCAGAAAGCAGAGTGGCT+AGG | + | Chr8:87995544-87995563 | MsG0880047550.01.T01:CDS | 45.0% | |
AGAGTGGCTAGGAAGGATTT+GGG | + | Chr8:87995555-87995574 | MsG0880047550.01.T01:CDS | 45.0% | |
CCCAGAACTAGAAGATGATG+AGG | - | Chr8:87995712-87995731 | None:intergenic | 45.0% | |
GCAAGTAAACAACACGACCA+AGG | - | Chr8:87995498-87995517 | None:intergenic | 45.0% | |
TGATGAGGACGATGAACTTG+AGG | - | Chr8:87995697-87995716 | None:intergenic | 45.0% | |
! | AAGGATTTGGGTTTGGACCT+TGG | + | Chr8:87995567-87995586 | MsG0880047550.01.T01:CDS | 45.0% |
!! | TCATCTTCTAGTTCTGGGTC+TGG | + | Chr8:87995714-87995733 | MsG0880047550.01.T01:CDS | 45.0% |
AGAAAGCAGAGTGGCTAGGA+AGG | + | Chr8:87995548-87995567 | MsG0880047550.01.T01:CDS | 50.0% | |
CAGAGTGGCTAGGAAGGATT+TGG | + | Chr8:87995554-87995573 | MsG0880047550.01.T01:CDS | 50.0% | |
GTCCAATTCCCAATCCACCA+AGG | - | Chr8:87995587-87995606 | None:intergenic | 50.0% | |
TATGGCGAGGGTTATGGTCA+TGG | + | Chr8:87995891-87995910 | MsG0880047550.01.T01:CDS | 50.0% | |
TCTGGTTATGGCGAGGGTTA+TGG | + | Chr8:87995885-87995904 | MsG0880047550.01.T01:CDS | 50.0% | |
TTGGGAATTGGAGGTGGTAG+TGG | + | Chr8:87995624-87995643 | MsG0880047550.01.T01:CDS | 50.0% | |
! | CTTGGTGCAGGAGTTGGTTT+GGG | + | Chr8:87995606-87995625 | MsG0880047550.01.T01:CDS | 50.0% |
! | GATTTGGGTTTGGACCTTGG+TGG | + | Chr8:87995570-87995589 | MsG0880047550.01.T01:CDS | 50.0% |
! | GGCTAGGAAGGATTTGGGTT+TGG | + | Chr8:87995560-87995579 | MsG0880047550.01.T01:CDS | 50.0% |
! | TATGGTCATGGTGGGGGTTA+TGG | + | Chr8:87995903-87995922 | MsG0880047550.01.T01:CDS | 50.0% |
!! | ACTTGGTGCAGGAGTTGGTT+TGG | + | Chr8:87995605-87995624 | MsG0880047550.01.T01:CDS | 50.0% |
!! | ATTGGACTTGGTGCAGGAGT+TGG | + | Chr8:87995600-87995619 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GACCTTGGTGGATTGGGAAT+TGG | + | Chr8:87995582-87995601 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GCAGGAGTTGGTTTGGGAAT+TGG | + | Chr8:87995612-87995631 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GGAGTTGGTTTGGGAATTGG+AGG | + | Chr8:87995615-87995634 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GGTGGATTGGGAATTGGACT+TGG | + | Chr8:87995588-87995607 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GGTTTGGACCTTGGTGGATT+GGG | + | Chr8:87995576-87995595 | MsG0880047550.01.T01:CDS | 50.0% |
!! | GTTGGTTTGGGAATTGGAGG+TGG | + | Chr8:87995618-87995637 | MsG0880047550.01.T01:CDS | 50.0% |
!! | TCTAGTTCTGGGTCTGGTTC+CGG | + | Chr8:87995720-87995739 | MsG0880047550.01.T01:CDS | 50.0% |
!! | TTGGGAATTGGACTTGGTGC+AGG | + | Chr8:87995594-87995613 | MsG0880047550.01.T01:CDS | 50.0% |
AGGCTCATATGCAGGCTCTC+GGG | + | Chr8:87995758-87995777 | MsG0880047550.01.T01:CDS | 55.0% | |
CAGGCTCATATGCAGGCTCT+CGG | + | Chr8:87995757-87995776 | MsG0880047550.01.T01:CDS | 55.0% | |
CGAGGGTTATGGTCATGGTG+GGG | + | Chr8:87995896-87995915 | MsG0880047550.01.T01:CDS | 55.0% | |
GAGGGTTATGGTCATGGTGG+GGG | + | Chr8:87995897-87995916 | MsG0880047550.01.T01:CDS | 55.0% | |
GCGAGGGTTATGGTCATGGT+GGG | + | Chr8:87995895-87995914 | MsG0880047550.01.T01:CDS | 55.0% | |
GGATCAGGTGGTAGAAGTCG+CGG | + | Chr8:87995789-87995808 | MsG0880047550.01.T01:CDS | 55.0% | |
GTGGGGGTTATGGTGAAGGT+GGG | + | Chr8:87995913-87995932 | MsG0880047550.01.T01:CDS | 55.0% | |
TCGGAAGCAGGCTCATATGC+AGG | + | Chr8:87995750-87995769 | MsG0880047550.01.T01:CDS | 55.0% | |
TGGGGGTTATGGTGAAGGTG+GGG | + | Chr8:87995914-87995933 | MsG0880047550.01.T01:CDS | 55.0% | |
! | CATGGTGGGGGTTATGGTGA+AGG | + | Chr8:87995909-87995928 | MsG0880047550.01.T01:CDS | 55.0% |
! | GGGTTTGGACCTTGGTGGAT+TGG | + | Chr8:87995575-87995594 | MsG0880047550.01.T01:CDS | 55.0% |
!! | ATTGGAGGTGGTAGTGGCTC+TGG | + | Chr8:87995630-87995649 | MsG0880047550.01.T01:CDS | 55.0% |
!! | CTAGTTCTGGGTCTGGTTCC+GGG | + | Chr8:87995721-87995740 | MsG0880047550.01.T01:CDS | 55.0% |
!! | TAGTTCTGGGTCTGGTTCCG+GGG | + | Chr8:87995722-87995741 | MsG0880047550.01.T01:CDS | 55.0% |
ACCAGAACCAGAGCCTGCAC+CGG | - | Chr8:87995664-87995683 | None:intergenic | 60.0% | |
GGCGAGGGTTATGGTCATGG+TGG | + | Chr8:87995894-87995913 | MsG0880047550.01.T01:CDS | 60.0% | |
GGGGGTTATGGTGAAGGTGG+GGG | + | Chr8:87995915-87995934 | MsG0880047550.01.T01:CDS | 60.0% | |
GGTGGGGGTTATGGTGAAGG+TGG | + | Chr8:87995912-87995931 | MsG0880047550.01.T01:CDS | 60.0% | |
TCAGGTGGTAGAAGTCGCGG+TGG | + | Chr8:87995792-87995811 | MsG0880047550.01.T01:CDS | 60.0% | |
TCATATGCAGGCTCTCGGGC+TGG | + | Chr8:87995762-87995781 | MsG0880047550.01.T01:CDS | 60.0% | |
! | CAGGGCTCTGGTTATGGCGA+GGG | + | Chr8:87995879-87995898 | MsG0880047550.01.T01:CDS | 60.0% |
! | TCTGGGCAGGGCTCTGGTTA+TGG | + | Chr8:87995873-87995892 | MsG0880047550.01.T01:CDS | 60.0% |
!! | TCTCGGGCTGGTTCAGGATC+AGG | + | Chr8:87995774-87995793 | MsG0880047550.01.T01:CDS | 60.0% |
GAGGAGGAGGTGGAGGCTCT+GGG | + | Chr8:87995856-87995875 | MsG0880047550.01.T01:CDS | 65.0% | |
GGTGGTAGAAGTCGCGGTGG+TGG | + | Chr8:87995795-87995814 | MsG0880047550.01.T01:CDS | 65.0% | |
! | AGAAGTCGCGGTGGTGGTCG+TGG | + | Chr8:87995801-87995820 | MsG0880047550.01.T01:CDS | 65.0% |
! | GCAGGGCTCTGGTTATGGCG+AGG | + | Chr8:87995878-87995897 | MsG0880047550.01.T01:CDS | 65.0% |
!! | AGTGGCTCTGGAGCTGGAGC+CGG | + | Chr8:87995642-87995661 | MsG0880047550.01.T01:CDS | 65.0% |
!! | CGGGCTGGTTCAGGATCAGG+TGG | + | Chr8:87995777-87995796 | MsG0880047550.01.T01:CDS | 65.0% |
!! | GGTGGTAGTGGCTCTGGAGC+TGG | + | Chr8:87995636-87995655 | MsG0880047550.01.T01:CDS | 65.0% |
GGAGGAGGAGGTGGAGGCTC+TGG | + | Chr8:87995855-87995874 | MsG0880047550.01.T01:CDS | 70.0% | |
! | AGTCGCGGTGGTGGTCGTGG+TGG | + | Chr8:87995804-87995823 | MsG0880047550.01.T01:CDS | 70.0% |
! | CTGGGTCTGGTTCCGGGGCA+GGG | + | Chr8:87995727-87995746 | MsG0880047550.01.T01:CDS | 70.0% |
! | GCCGGTGCAGGCTCTGGTTC+TGG | + | Chr8:87995660-87995679 | MsG0880047550.01.T01:CDS | 70.0% |
! | GTCTGGTTCCGGGGCAGGGT+CGG | + | Chr8:87995731-87995750 | MsG0880047550.01.T01:CDS | 70.0% |
! | TCTGGAGCTGGAGCCGGTGC+AGG | + | Chr8:87995648-87995667 | MsG0880047550.01.T01:CDS | 70.0% |
! | TCTGGGTCTGGTTCCGGGGC+AGG | + | Chr8:87995726-87995745 | MsG0880047550.01.T01:CDS | 70.0% |
!! | AGGAGGTGGAGGCTCTGGGC+AGG | + | Chr8:87995860-87995879 | MsG0880047550.01.T01:CDS | 70.0% |
!! | GCAGGCTCTCGGGCTGGTTC+AGG | + | Chr8:87995768-87995787 | MsG0880047550.01.T01:CDS | 70.0% |
!! | GGAGGAGGTGGTGGAGGTGG+CGG | + | Chr8:87995831-87995850 | MsG0880047550.01.T01:CDS | 70.0% |
!! | GGAGGTGGAGGCTCTGGGCA+GGG | + | Chr8:87995861-87995880 | MsG0880047550.01.T01:CDS | 70.0% |
!! | GGTGGAGGAGGTGGTGGAGG+TGG | + | Chr8:87995828-87995847 | MsG0880047550.01.T01:CDS | 70.0% |
GCCTGCTTCCGACCCTGCCC+CGG | - | Chr8:87995742-87995761 | None:intergenic | 75.0% | |
GCTGGAGCCGGTGCAGGCTC+TGG | + | Chr8:87995654-87995673 | MsG0880047550.01.T01:CDS | 75.0% | |
GGCGGTGGAGGAGGAGGTGG+AGG | + | Chr8:87995849-87995868 | MsG0880047550.01.T01:CDS | 75.0% | |
TCCGGGGCAGGGTCGGAAGC+AGG | + | Chr8:87995738-87995757 | MsG0880047550.01.T01:CDS | 75.0% | |
! | CGCGGTGGTGGTCGTGGTGG+CGG | + | Chr8:87995807-87995826 | MsG0880047550.01.T01:CDS | 75.0% |
! | GGAGGTGGCGGTGGAGGAGG+AGG | + | Chr8:87995843-87995862 | MsG0880047550.01.T01:CDS | 75.0% |
! | GGCGGTGGAGGAGGTGGTGG+AGG | + | Chr8:87995825-87995844 | MsG0880047550.01.T01:CDS | 75.0% |
! | GGTGGAGGTGGCGGTGGAGG+AGG | + | Chr8:87995840-87995859 | MsG0880047550.01.T01:CDS | 75.0% |
! | GGTGGCGGTGGAGGAGGAGG+TGG | + | Chr8:87995846-87995865 | MsG0880047550.01.T01:CDS | 75.0% |
! | GGTGGCGGTGGAGGAGGTGG+TGG | + | Chr8:87995822-87995841 | MsG0880047550.01.T01:CDS | 75.0% |
!! | CGTGGTGGCGGTGGAGGAGG+TGG | + | Chr8:87995819-87995838 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGAGGCTCTGGGCAGGGCTC+TGG | + | Chr8:87995867-87995886 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGAGGTGGTGGAGGTGGCGG+TGG | + | Chr8:87995834-87995853 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGTCGTGGTGGCGGTGGAGG+AGG | + | Chr8:87995816-87995835 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGTGGTCGTGGTGGCGGTGG+AGG | + | Chr8:87995813-87995832 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGTGGTGGAGGTGGCGGTGG+AGG | + | Chr8:87995837-87995856 | MsG0880047550.01.T01:CDS | 75.0% |
!! | GGTGGTGGTCGTGGTGGCGG+TGG | + | Chr8:87995810-87995829 | MsG0880047550.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01;Name=MsG0880047550.01 |
Chr8 | mRNA | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01;Parent=MsG0880047550.01;Name=MsG0880047550.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|152 |
Chr8 | exon | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01:exon:15827;Parent=MsG0880047550.01.T01 |
Chr8 | CDS | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01:cds;Parent=MsG0880047550.01.T01 |
Gene Sequence |
Protein sequence |