Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047550.01.T01 | KEH32590.1 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 7.95E-78 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047550.01.T01 | A0A072V362 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 3.80e-78 | 238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880047550.01 | MsG0880047551.01 | 0.875493 | 2.951493e-68 | 1.380684e-64 |
| MsG0580030060.01 | MsG0880047550.01 | 0.809240 | 2.086420e-50 | 1.218605e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047550.01.T01 | MTR_4g129760 | 99.342 | 152 | 1 | 0 | 1 | 152 | 1 | 152 | 9.63e-82 | 238 |
| MsG0880047550.01.T01 | MTR_4g129770 | 93.103 | 29 | 2 | 0 | 1 | 29 | 1 | 29 | 1.01e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 85 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCATCATCTTCTAGTTC+TGG | 0.219198 | 8:+87995708 | MsG0880047550.01.T01:CDS |
| GCAGGAGTTGGTTTGGGAAT+TGG | 0.232769 | 8:+87995612 | MsG0880047550.01.T01:CDS |
| GGAGGAGGAGGTGGAGGCTC+TGG | 0.244452 | 8:+87995855 | MsG0880047550.01.T01:CDS |
| TCTAGTTCTGGGTCTGGTTC+CGG | 0.249223 | 8:+87995720 | MsG0880047550.01.T01:CDS |
| GGTGGAGGTGGCGGTGGAGG+AGG | 0.256095 | 8:+87995840 | MsG0880047550.01.T01:CDS |
| CTAGTTCTGGGTCTGGTTCC+GGG | 0.259670 | 8:+87995721 | MsG0880047550.01.T01:CDS |
| GGTGGTGGAGGTGGCGGTGG+AGG | 0.267855 | 8:+87995837 | MsG0880047550.01.T01:CDS |
| GGTGGCGGTGGAGGAGGAGG+TGG | 0.275913 | 8:+87995846 | MsG0880047550.01.T01:CDS |
| CAGAGTGGCTAGGAAGGATT+TGG | 0.278376 | 8:+87995554 | MsG0880047550.01.T01:CDS |
| CTTGGTGCAGGAGTTGGTTT+GGG | 0.282886 | 8:+87995606 | MsG0880047550.01.T01:CDS |
| TTTACTTGCACTACTTGTTT+TGG | 0.283234 | 8:+87995509 | MsG0880047550.01.T01:CDS |
| GCCGGTGCAGGCTCTGGTTC+TGG | 0.292529 | 8:+87995660 | MsG0880047550.01.T01:CDS |
| GGAGGTGGTGGAGGTGGCGG+TGG | 0.294910 | 8:+87995834 | MsG0880047550.01.T01:CDS |
| TCTGGGCAGGGCTCTGGTTA+TGG | 0.295227 | 8:+87995873 | MsG0880047550.01.T01:CDS |
| GGAGGCTCTGGGCAGGGCTC+TGG | 0.298439 | 8:+87995867 | MsG0880047550.01.T01:CDS |
| GACCTTGGTGGATTGGGAAT+TGG | 0.303942 | 8:+87995582 | MsG0880047550.01.T01:CDS |
| GGTTTGGACCTTGGTGGATT+GGG | 0.305506 | 8:+87995576 | MsG0880047550.01.T01:CDS |
| GGAGGTGGCGGTGGAGGAGG+AGG | 0.313425 | 8:+87995843 | MsG0880047550.01.T01:CDS |
| TCTGGGTCTGGTTCCGGGGC+AGG | 0.320853 | 8:+87995726 | MsG0880047550.01.T01:CDS |
| AGGAGGTGGAGGCTCTGGGC+AGG | 0.327873 | 8:+87995860 | MsG0880047550.01.T01:CDS |
| GGCGGTGGAGGAGGTGGTGG+AGG | 0.336757 | 8:+87995825 | MsG0880047550.01.T01:CDS |
| TCTGGTTATGGCGAGGGTTA+TGG | 0.338296 | 8:+87995885 | MsG0880047550.01.T01:CDS |
| CGTGGTGGCGGTGGAGGAGG+TGG | 0.342932 | 8:+87995819 | MsG0880047550.01.T01:CDS |
| GCAGGCTCTCGGGCTGGTTC+AGG | 0.343637 | 8:+87995768 | MsG0880047550.01.T01:CDS |
| GGTGGCGGTGGAGGAGGTGG+TGG | 0.345673 | 8:+87995822 | MsG0880047550.01.T01:CDS |
| GGTCGTGGTGGCGGTGGAGG+AGG | 0.346060 | 8:+87995816 | MsG0880047550.01.T01:CDS |
| TCTCGGGCTGGTTCAGGATC+AGG | 0.347584 | 8:+87995774 | MsG0880047550.01.T01:CDS |
| GGTGGTAGTGGCTCTGGAGC+TGG | 0.348332 | 8:+87995636 | MsG0880047550.01.T01:CDS |
| GGTGGTCGTGGTGGCGGTGG+AGG | 0.360471 | 8:+87995813 | MsG0880047550.01.T01:CDS |
| ACTTGGTGCAGGAGTTGGTT+TGG | 0.360857 | 8:+87995605 | MsG0880047550.01.T01:CDS |
| GGCGGTGGAGGAGGAGGTGG+AGG | 0.367264 | 8:+87995849 | MsG0880047550.01.T01:CDS |
| CCTCATCATCTTCTAGTTCT+GGG | 0.369328 | 8:+87995709 | MsG0880047550.01.T01:CDS |
| TCTGGAGCTGGAGCCGGTGC+AGG | 0.370281 | 8:+87995648 | MsG0880047550.01.T01:CDS |
| GGCTAGGAAGGATTTGGGTT+TGG | 0.372485 | 8:+87995560 | MsG0880047550.01.T01:CDS |
| GGTGGAGGAGGTGGTGGAGG+TGG | 0.374685 | 8:+87995828 | MsG0880047550.01.T01:CDS |
| GGAGGAGGTGGTGGAGGTGG+CGG | 0.378876 | 8:+87995831 | MsG0880047550.01.T01:CDS |
| ATTGGAGGTGGTAGTGGCTC+TGG | 0.380087 | 8:+87995630 | MsG0880047550.01.T01:CDS |
| GGGTTTGGACCTTGGTGGAT+TGG | 0.387616 | 8:+87995575 | MsG0880047550.01.T01:CDS |
| GGTGGATTGGGAATTGGACT+TGG | 0.393450 | 8:+87995588 | MsG0880047550.01.T01:CDS |
| TTGGGAATTGGAGGTGGTAG+TGG | 0.394926 | 8:+87995624 | MsG0880047550.01.T01:CDS |
| GAGGAGGAGGTGGAGGCTCT+GGG | 0.397806 | 8:+87995856 | MsG0880047550.01.T01:CDS |
| AAGGATTTGGGTTTGGACCT+TGG | 0.398569 | 8:+87995567 | MsG0880047550.01.T01:CDS |
| GGAGTTGGTTTGGGAATTGG+AGG | 0.401347 | 8:+87995615 | MsG0880047550.01.T01:CDS |
| GCTGGAGCCGGTGCAGGCTC+TGG | 0.401781 | 8:+87995654 | MsG0880047550.01.T01:CDS |
| CGCGGTGGTGGTCGTGGTGG+CGG | 0.402098 | 8:+87995807 | MsG0880047550.01.T01:CDS |
| TCCGGGGCAGGGTCGGAAGC+AGG | 0.407469 | 8:+87995738 | MsG0880047550.01.T01:CDS |
| GTCTGGTTCCGGGGCAGGGT+CGG | 0.409940 | 8:+87995731 | MsG0880047550.01.T01:CDS |
| CTGGGTCTGGTTCCGGGGCA+GGG | 0.418058 | 8:+87995727 | MsG0880047550.01.T01:CDS |
| ATTGGACTTGGTGCAGGAGT+TGG | 0.433770 | 8:+87995600 | MsG0880047550.01.T01:CDS |
| TCATCTTCTAGTTCTGGGTC+TGG | 0.435553 | 8:+87995714 | MsG0880047550.01.T01:CDS |
| GGAGGTGGAGGCTCTGGGCA+GGG | 0.442151 | 8:+87995861 | MsG0880047550.01.T01:CDS |
| GAGGGTTATGGTCATGGTGG+GGG | 0.442197 | 8:+87995897 | MsG0880047550.01.T01:CDS |
| CGAGGGTTATGGTCATGGTG+GGG | 0.442312 | 8:+87995896 | MsG0880047550.01.T01:CDS |
| GGCGAGGGTTATGGTCATGG+TGG | 0.449337 | 8:+87995894 | MsG0880047550.01.T01:CDS |
| CAGGCTCATATGCAGGCTCT+CGG | 0.458821 | 8:+87995757 | MsG0880047550.01.T01:CDS |
| TTGGGAATTGGACTTGGTGC+AGG | 0.468502 | 8:+87995594 | MsG0880047550.01.T01:CDS |
| AGAAGTCGCGGTGGTGGTCG+TGG | 0.471629 | 8:+87995801 | MsG0880047550.01.T01:CDS |
| AGTGGCTCTGGAGCTGGAGC+CGG | 0.477935 | 8:+87995642 | MsG0880047550.01.T01:CDS |
| AGAGTGGCTAGGAAGGATTT+GGG | 0.484368 | 8:+87995555 | MsG0880047550.01.T01:CDS |
| GCCTGCTTCCGACCCTGCCC+CGG | 0.485604 | 8:-87995739 | None:intergenic |
| GTTGGTTTGGGAATTGGAGG+TGG | 0.486237 | 8:+87995618 | MsG0880047550.01.T01:CDS |
| GATTTGGGTTTGGACCTTGG+TGG | 0.487099 | 8:+87995570 | MsG0880047550.01.T01:CDS |
| GGTGGTGGTCGTGGTGGCGG+TGG | 0.490750 | 8:+87995810 | MsG0880047550.01.T01:CDS |
| AGGCTCATATGCAGGCTCTC+GGG | 0.505425 | 8:+87995758 | MsG0880047550.01.T01:CDS |
| GCGAGGGTTATGGTCATGGT+GGG | 0.516009 | 8:+87995895 | MsG0880047550.01.T01:CDS |
| GGTGGTAGAAGTCGCGGTGG+TGG | 0.518355 | 8:+87995795 | MsG0880047550.01.T01:CDS |
| TCGGAAGCAGGCTCATATGC+AGG | 0.520347 | 8:+87995750 | MsG0880047550.01.T01:CDS |
| TCATATGCAGGCTCTCGGGC+TGG | 0.520510 | 8:+87995762 | MsG0880047550.01.T01:CDS |
| AGAAAGCAGAGTGGCTAGGA+AGG | 0.521874 | 8:+87995548 | MsG0880047550.01.T01:CDS |
| CAGGGCTCTGGTTATGGCGA+GGG | 0.533964 | 8:+87995879 | MsG0880047550.01.T01:CDS |
| TATGGCGAGGGTTATGGTCA+TGG | 0.537691 | 8:+87995891 | MsG0880047550.01.T01:CDS |
| TAGTTCTGGGTCTGGTTCCG+GGG | 0.559873 | 8:+87995722 | MsG0880047550.01.T01:CDS |
| GCAGGGCTCTGGTTATGGCG+AGG | 0.576034 | 8:+87995878 | MsG0880047550.01.T01:CDS |
| AATCAGAAAGCAGAGTGGCT+AGG | 0.580806 | 8:+87995544 | MsG0880047550.01.T01:CDS |
| TGATGAGGACGATGAACTTG+AGG | 0.597140 | 8:-87995694 | None:intergenic |
| CTACAATAATGGCTGCACCT+TGG | 0.598690 | 8:+87995478 | None:intergenic |
| ACCAGAACCAGAGCCTGCAC+CGG | 0.601328 | 8:-87995661 | None:intergenic |
| CCCAGAACTAGAAGATGATG+AGG | 0.614268 | 8:-87995709 | None:intergenic |
| CGGGCTGGTTCAGGATCAGG+TGG | 0.622498 | 8:+87995777 | MsG0880047550.01.T01:CDS |
| AGTCGCGGTGGTGGTCGTGG+TGG | 0.635861 | 8:+87995804 | MsG0880047550.01.T01:CDS |
| GGATCAGGTGGTAGAAGTCG+CGG | 0.642539 | 8:+87995789 | MsG0880047550.01.T01:CDS |
| GCAAGTAAACAACACGACCA+AGG | 0.677941 | 8:-87995495 | None:intergenic |
| GTCCAATTCCCAATCCACCA+AGG | 0.692829 | 8:-87995584 | None:intergenic |
| TCAGGTGGTAGAAGTCGCGG+TGG | 0.714713 | 8:+87995792 | MsG0880047550.01.T01:CDS |
| TATTGAATCAGAAAGCAGAG+TGG | 0.753468 | 8:+87995539 | MsG0880047550.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTACTTGCACTACTTGTTT+TGG | + | Chr8:87995509-87995528 | MsG0880047550.01.T01:CDS | 30.0% |
| TATTGAATCAGAAAGCAGAG+TGG | + | Chr8:87995539-87995558 | MsG0880047550.01.T01:CDS | 35.0% | |
| !! | CCTCATCATCTTCTAGTTCT+GGG | + | Chr8:87995709-87995728 | MsG0880047550.01.T01:CDS | 40.0% |
| !! | TCCTCATCATCTTCTAGTTC+TGG | + | Chr8:87995708-87995727 | MsG0880047550.01.T01:CDS | 40.0% |
| AATCAGAAAGCAGAGTGGCT+AGG | + | Chr8:87995544-87995563 | MsG0880047550.01.T01:CDS | 45.0% | |
| AGAGTGGCTAGGAAGGATTT+GGG | + | Chr8:87995555-87995574 | MsG0880047550.01.T01:CDS | 45.0% | |
| CCCAGAACTAGAAGATGATG+AGG | - | Chr8:87995712-87995731 | None:intergenic | 45.0% | |
| GCAAGTAAACAACACGACCA+AGG | - | Chr8:87995498-87995517 | None:intergenic | 45.0% | |
| TGATGAGGACGATGAACTTG+AGG | - | Chr8:87995697-87995716 | None:intergenic | 45.0% | |
| ! | AAGGATTTGGGTTTGGACCT+TGG | + | Chr8:87995567-87995586 | MsG0880047550.01.T01:CDS | 45.0% |
| !! | TCATCTTCTAGTTCTGGGTC+TGG | + | Chr8:87995714-87995733 | MsG0880047550.01.T01:CDS | 45.0% |
| AGAAAGCAGAGTGGCTAGGA+AGG | + | Chr8:87995548-87995567 | MsG0880047550.01.T01:CDS | 50.0% | |
| CAGAGTGGCTAGGAAGGATT+TGG | + | Chr8:87995554-87995573 | MsG0880047550.01.T01:CDS | 50.0% | |
| GTCCAATTCCCAATCCACCA+AGG | - | Chr8:87995587-87995606 | None:intergenic | 50.0% | |
| TATGGCGAGGGTTATGGTCA+TGG | + | Chr8:87995891-87995910 | MsG0880047550.01.T01:CDS | 50.0% | |
| TCTGGTTATGGCGAGGGTTA+TGG | + | Chr8:87995885-87995904 | MsG0880047550.01.T01:CDS | 50.0% | |
| TTGGGAATTGGAGGTGGTAG+TGG | + | Chr8:87995624-87995643 | MsG0880047550.01.T01:CDS | 50.0% | |
| ! | CTTGGTGCAGGAGTTGGTTT+GGG | + | Chr8:87995606-87995625 | MsG0880047550.01.T01:CDS | 50.0% |
| ! | GATTTGGGTTTGGACCTTGG+TGG | + | Chr8:87995570-87995589 | MsG0880047550.01.T01:CDS | 50.0% |
| ! | GGCTAGGAAGGATTTGGGTT+TGG | + | Chr8:87995560-87995579 | MsG0880047550.01.T01:CDS | 50.0% |
| ! | TATGGTCATGGTGGGGGTTA+TGG | + | Chr8:87995903-87995922 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | ACTTGGTGCAGGAGTTGGTT+TGG | + | Chr8:87995605-87995624 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | ATTGGACTTGGTGCAGGAGT+TGG | + | Chr8:87995600-87995619 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GACCTTGGTGGATTGGGAAT+TGG | + | Chr8:87995582-87995601 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GCAGGAGTTGGTTTGGGAAT+TGG | + | Chr8:87995612-87995631 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GGAGTTGGTTTGGGAATTGG+AGG | + | Chr8:87995615-87995634 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GGTGGATTGGGAATTGGACT+TGG | + | Chr8:87995588-87995607 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GGTTTGGACCTTGGTGGATT+GGG | + | Chr8:87995576-87995595 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | GTTGGTTTGGGAATTGGAGG+TGG | + | Chr8:87995618-87995637 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | TCTAGTTCTGGGTCTGGTTC+CGG | + | Chr8:87995720-87995739 | MsG0880047550.01.T01:CDS | 50.0% |
| !! | TTGGGAATTGGACTTGGTGC+AGG | + | Chr8:87995594-87995613 | MsG0880047550.01.T01:CDS | 50.0% |
| AGGCTCATATGCAGGCTCTC+GGG | + | Chr8:87995758-87995777 | MsG0880047550.01.T01:CDS | 55.0% | |
| CAGGCTCATATGCAGGCTCT+CGG | + | Chr8:87995757-87995776 | MsG0880047550.01.T01:CDS | 55.0% | |
| CGAGGGTTATGGTCATGGTG+GGG | + | Chr8:87995896-87995915 | MsG0880047550.01.T01:CDS | 55.0% | |
| GAGGGTTATGGTCATGGTGG+GGG | + | Chr8:87995897-87995916 | MsG0880047550.01.T01:CDS | 55.0% | |
| GCGAGGGTTATGGTCATGGT+GGG | + | Chr8:87995895-87995914 | MsG0880047550.01.T01:CDS | 55.0% | |
| GGATCAGGTGGTAGAAGTCG+CGG | + | Chr8:87995789-87995808 | MsG0880047550.01.T01:CDS | 55.0% | |
| GTGGGGGTTATGGTGAAGGT+GGG | + | Chr8:87995913-87995932 | MsG0880047550.01.T01:CDS | 55.0% | |
| TCGGAAGCAGGCTCATATGC+AGG | + | Chr8:87995750-87995769 | MsG0880047550.01.T01:CDS | 55.0% | |
| TGGGGGTTATGGTGAAGGTG+GGG | + | Chr8:87995914-87995933 | MsG0880047550.01.T01:CDS | 55.0% | |
| ! | CATGGTGGGGGTTATGGTGA+AGG | + | Chr8:87995909-87995928 | MsG0880047550.01.T01:CDS | 55.0% |
| ! | GGGTTTGGACCTTGGTGGAT+TGG | + | Chr8:87995575-87995594 | MsG0880047550.01.T01:CDS | 55.0% |
| !! | ATTGGAGGTGGTAGTGGCTC+TGG | + | Chr8:87995630-87995649 | MsG0880047550.01.T01:CDS | 55.0% |
| !! | CTAGTTCTGGGTCTGGTTCC+GGG | + | Chr8:87995721-87995740 | MsG0880047550.01.T01:CDS | 55.0% |
| !! | TAGTTCTGGGTCTGGTTCCG+GGG | + | Chr8:87995722-87995741 | MsG0880047550.01.T01:CDS | 55.0% |
| ACCAGAACCAGAGCCTGCAC+CGG | - | Chr8:87995664-87995683 | None:intergenic | 60.0% | |
| GGCGAGGGTTATGGTCATGG+TGG | + | Chr8:87995894-87995913 | MsG0880047550.01.T01:CDS | 60.0% | |
| GGGGGTTATGGTGAAGGTGG+GGG | + | Chr8:87995915-87995934 | MsG0880047550.01.T01:CDS | 60.0% | |
| GGTGGGGGTTATGGTGAAGG+TGG | + | Chr8:87995912-87995931 | MsG0880047550.01.T01:CDS | 60.0% | |
| TCAGGTGGTAGAAGTCGCGG+TGG | + | Chr8:87995792-87995811 | MsG0880047550.01.T01:CDS | 60.0% | |
| TCATATGCAGGCTCTCGGGC+TGG | + | Chr8:87995762-87995781 | MsG0880047550.01.T01:CDS | 60.0% | |
| ! | CAGGGCTCTGGTTATGGCGA+GGG | + | Chr8:87995879-87995898 | MsG0880047550.01.T01:CDS | 60.0% |
| ! | TCTGGGCAGGGCTCTGGTTA+TGG | + | Chr8:87995873-87995892 | MsG0880047550.01.T01:CDS | 60.0% |
| !! | TCTCGGGCTGGTTCAGGATC+AGG | + | Chr8:87995774-87995793 | MsG0880047550.01.T01:CDS | 60.0% |
| GAGGAGGAGGTGGAGGCTCT+GGG | + | Chr8:87995856-87995875 | MsG0880047550.01.T01:CDS | 65.0% | |
| GGTGGTAGAAGTCGCGGTGG+TGG | + | Chr8:87995795-87995814 | MsG0880047550.01.T01:CDS | 65.0% | |
| ! | AGAAGTCGCGGTGGTGGTCG+TGG | + | Chr8:87995801-87995820 | MsG0880047550.01.T01:CDS | 65.0% |
| ! | GCAGGGCTCTGGTTATGGCG+AGG | + | Chr8:87995878-87995897 | MsG0880047550.01.T01:CDS | 65.0% |
| !! | AGTGGCTCTGGAGCTGGAGC+CGG | + | Chr8:87995642-87995661 | MsG0880047550.01.T01:CDS | 65.0% |
| !! | CGGGCTGGTTCAGGATCAGG+TGG | + | Chr8:87995777-87995796 | MsG0880047550.01.T01:CDS | 65.0% |
| !! | GGTGGTAGTGGCTCTGGAGC+TGG | + | Chr8:87995636-87995655 | MsG0880047550.01.T01:CDS | 65.0% |
| GGAGGAGGAGGTGGAGGCTC+TGG | + | Chr8:87995855-87995874 | MsG0880047550.01.T01:CDS | 70.0% | |
| ! | AGTCGCGGTGGTGGTCGTGG+TGG | + | Chr8:87995804-87995823 | MsG0880047550.01.T01:CDS | 70.0% |
| ! | CTGGGTCTGGTTCCGGGGCA+GGG | + | Chr8:87995727-87995746 | MsG0880047550.01.T01:CDS | 70.0% |
| ! | GCCGGTGCAGGCTCTGGTTC+TGG | + | Chr8:87995660-87995679 | MsG0880047550.01.T01:CDS | 70.0% |
| ! | GTCTGGTTCCGGGGCAGGGT+CGG | + | Chr8:87995731-87995750 | MsG0880047550.01.T01:CDS | 70.0% |
| ! | TCTGGAGCTGGAGCCGGTGC+AGG | + | Chr8:87995648-87995667 | MsG0880047550.01.T01:CDS | 70.0% |
| ! | TCTGGGTCTGGTTCCGGGGC+AGG | + | Chr8:87995726-87995745 | MsG0880047550.01.T01:CDS | 70.0% |
| !! | AGGAGGTGGAGGCTCTGGGC+AGG | + | Chr8:87995860-87995879 | MsG0880047550.01.T01:CDS | 70.0% |
| !! | GCAGGCTCTCGGGCTGGTTC+AGG | + | Chr8:87995768-87995787 | MsG0880047550.01.T01:CDS | 70.0% |
| !! | GGAGGAGGTGGTGGAGGTGG+CGG | + | Chr8:87995831-87995850 | MsG0880047550.01.T01:CDS | 70.0% |
| !! | GGAGGTGGAGGCTCTGGGCA+GGG | + | Chr8:87995861-87995880 | MsG0880047550.01.T01:CDS | 70.0% |
| !! | GGTGGAGGAGGTGGTGGAGG+TGG | + | Chr8:87995828-87995847 | MsG0880047550.01.T01:CDS | 70.0% |
| GCCTGCTTCCGACCCTGCCC+CGG | - | Chr8:87995742-87995761 | None:intergenic | 75.0% | |
| GCTGGAGCCGGTGCAGGCTC+TGG | + | Chr8:87995654-87995673 | MsG0880047550.01.T01:CDS | 75.0% | |
| GGCGGTGGAGGAGGAGGTGG+AGG | + | Chr8:87995849-87995868 | MsG0880047550.01.T01:CDS | 75.0% | |
| TCCGGGGCAGGGTCGGAAGC+AGG | + | Chr8:87995738-87995757 | MsG0880047550.01.T01:CDS | 75.0% | |
| ! | CGCGGTGGTGGTCGTGGTGG+CGG | + | Chr8:87995807-87995826 | MsG0880047550.01.T01:CDS | 75.0% |
| ! | GGAGGTGGCGGTGGAGGAGG+AGG | + | Chr8:87995843-87995862 | MsG0880047550.01.T01:CDS | 75.0% |
| ! | GGCGGTGGAGGAGGTGGTGG+AGG | + | Chr8:87995825-87995844 | MsG0880047550.01.T01:CDS | 75.0% |
| ! | GGTGGAGGTGGCGGTGGAGG+AGG | + | Chr8:87995840-87995859 | MsG0880047550.01.T01:CDS | 75.0% |
| ! | GGTGGCGGTGGAGGAGGAGG+TGG | + | Chr8:87995846-87995865 | MsG0880047550.01.T01:CDS | 75.0% |
| ! | GGTGGCGGTGGAGGAGGTGG+TGG | + | Chr8:87995822-87995841 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | CGTGGTGGCGGTGGAGGAGG+TGG | + | Chr8:87995819-87995838 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGAGGCTCTGGGCAGGGCTC+TGG | + | Chr8:87995867-87995886 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGAGGTGGTGGAGGTGGCGG+TGG | + | Chr8:87995834-87995853 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGTCGTGGTGGCGGTGGAGG+AGG | + | Chr8:87995816-87995835 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGTGGTCGTGGTGGCGGTGG+AGG | + | Chr8:87995813-87995832 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGTGGTGGAGGTGGCGGTGG+AGG | + | Chr8:87995837-87995856 | MsG0880047550.01.T01:CDS | 75.0% |
| !! | GGTGGTGGTCGTGGTGGCGG+TGG | + | Chr8:87995810-87995829 | MsG0880047550.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01;Name=MsG0880047550.01 |
| Chr8 | mRNA | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01;Parent=MsG0880047550.01;Name=MsG0880047550.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|152 |
| Chr8 | exon | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01:exon:15827;Parent=MsG0880047550.01.T01 |
| Chr8 | CDS | 87995486 | 87995944 | 87995486 | ID=MsG0880047550.01.T01:cds;Parent=MsG0880047550.01.T01 |
| Gene Sequence |
| Protein sequence |