AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0000060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0000060 MtrunA17_Chr2g0298811 95.881 874 22 1 1 874 1 860 0.0 1721
Msa0000060 MtrunA17_Chr4g0071661 69.187 873 209 4 1 870 1 816 0.0 1215
Msa0000060 MtrunA17_Chr1g0177411 33.144 878 487 16 1 857 66 864 4.53e-139 435
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0000060 AT3G28430.1 61.475 854 299 6 1 848 1 830 0.0 1016

Find 215 sgRNAs with CRISPR-Local

Find 842 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACAAACCTAATATATATT+TGG 0.157892 1_1:+710180 None:intergenic
CGGGGCTGATGTACAAGTTT+TGG 0.184742 1_1:-715804 Msa0000060:CDS
AGCATGCACTTTGGTTCTTT+TGG 0.198261 1_1:+712105 None:intergenic
GCTCTTGAAAAGGAAGTTAA+AGG 0.223252 1_1:-712297 Msa0000060:CDS
ACTCACCATGATAAACATTA+AGG 0.232577 1_1:+718965 None:intergenic
CGGGTTGCTGCACCTTTGGC+TGG 0.233588 1_1:-710826 Msa0000060:CDS
CCCTCGTGTACGTAGATTTC+AGG 0.260564 1_1:-714306 Msa0000060:intron
AATCAAATGAATACGTAATT+AGG 0.260951 1_1:+719880 None:intergenic
TATGCTCCCAAATATATATT+AGG 0.264615 1_1:-710187 Msa0000060:three_prime_UTR
TTCATTTCAGTGCCTGGCTT+TGG 0.267132 1_1:+711551 None:intergenic
TTGACCTAATTTATAATAAT+AGG 0.281220 1_1:-710258 Msa0000060:three_prime_UTR
TGTTTATCTTAATAAGATTA+AGG 0.285022 1_1:-714618 Msa0000060:intron
TCATTTCAGTGCCTGGCTTT+GGG 0.287901 1_1:+711552 None:intergenic
CATGTTCACTCTGTAGGTTT+TGG 0.288820 1_1:+720049 None:intergenic
ACTCGATACCCCAAGTGTTT+TGG 0.289679 1_1:-722030 Msa0000060:five_prime_UTR
GCAGTCTCTGTAGGAACTTC+TGG 0.290880 1_1:-710901 Msa0000060:CDS
ACAGCCTATTATTATAAATT+AGG 0.295880 1_1:+710254 None:intergenic
GAGTCCTTTACAAAATGTTC+TGG 0.305363 1_1:-718235 Msa0000060:CDS
AATTCTCGAGCCCAGACTTC+TGG 0.320727 1_1:-711587 Msa0000060:CDS
CACAGATTACTTCTCAAATC+TGG 0.323450 1_1:-718788 Msa0000060:CDS
CTGCCGCAAGTCCAGAAGTC+TGG 0.324057 1_1:+711576 None:intergenic
AACGGAATCTCACTCGAAAA+AGG 0.326138 1_1:+720241 None:intergenic
TTGAATTCTGACTCACTATA+AGG 0.333375 1_1:+713154 None:intergenic
TTCTTACTTTCAACGATTCC+AGG 0.336418 1_1:+713122 None:intergenic
CGTATCGCCTCGACATATAA+TGG 0.337131 1_1:+719039 None:intergenic
GAAGATGGATATTGGCGTTC+AGG 0.338456 1_1:-710468 Msa0000060:CDS
GCTTTGGTTGGCGAGGCTTC+AGG 0.339184 1_1:-714704 Msa0000060:CDS
ACAGATTTCTTACGAGAATT+CGG 0.350091 1_1:-712325 Msa0000060:intron
AAAGGGAAAATTTACAAATC+AGG 0.360718 1_1:+710106 None:intergenic
TGTTCGGGTTGCTGCACCTT+TGG 0.360963 1_1:-710830 Msa0000060:CDS
TGTTGATGGAAGATGGATAT+TGG 0.366644 1_1:-710476 Msa0000060:CDS
CATGTTTGTGCAGCAAGCTT+TGG 0.370993 1_1:-714720 Msa0000060:intron
ATATATCGGCAGAGACACTA+TGG 0.380276 1_1:-713207 Msa0000060:CDS
TACAAACCTAATATATATTT+GGG 0.380764 1_1:+710181 None:intergenic
GATAGTCAAGATCAAAGATT+TGG 0.384721 1_1:-718293 Msa0000060:CDS
GTCAAAGACTTACAATGAAT+CGG 0.393263 1_1:+710276 None:intergenic
GTTATTAACCTTTCAACATC+AGG 0.395312 1_1:+718527 None:intergenic
GTAACGGTAGAGTTTGAATC+TGG 0.396983 1_1:+718614 None:intergenic
TTTAGATTAATGAATCTTCT+CGG 0.400463 1_1:+722180 None:intergenic
AGTATCACCATGCTAAATAA+TGG 0.401933 1_1:-718067 Msa0000060:CDS
TTGACGATAAGCATTCAAAA+TGG 0.410160 1_1:-710585 Msa0000060:CDS
TCTTCCTTCCCTGAGGATAG+TGG 0.410982 1_1:-718468 Msa0000060:CDS
CCGAGGTTCATTTCAGTGCC+TGG 0.411136 1_1:+711545 None:intergenic
TTTAGTGATGTAATCTCTGC+TGG 0.413985 1_1:-718554 Msa0000060:CDS
GGTCATCATTGAAGAGCAAT+TGG 0.425267 1_1:-719705 Msa0000060:intron
CTCCTAAAGAATGAGAGAAA+AGG 0.425457 1_1:+710088 None:intergenic
TACGTATTCTAAAACTTAGC+AGG 0.429174 1_1:-720119 Msa0000060:CDS
AGTCCTTTACAAAATGTTCT+GGG 0.432597 1_1:-718234 Msa0000060:CDS
GAAGCCGTATGGAGTTGTTC+GGG 0.437061 1_1:-710845 Msa0000060:CDS
GGGCTTGATACCACGTTTGA+AGG 0.438609 1_1:+714326 None:intergenic
TTCGGCTTGTGCTCTTGAAA+AGG 0.440602 1_1:-712307 Msa0000060:CDS
AGAAGCCGTATGGAGTTGTT+CGG 0.442153 1_1:-710846 Msa0000060:CDS
GTAGAGTTTGAATCTGGGCC+TGG 0.445647 1_1:+718620 None:intergenic
GAAGAGGAATCCTCTGAAAC+AGG 0.449307 1_1:+710313 None:intergenic
ACTTGCTTTGTTGCATCTTG+AGG 0.451011 1_1:-718315 Msa0000060:CDS
TTCATGGAAAAGCAAGTTGT+GGG 0.456331 1_1:-720150 Msa0000060:CDS
TCCTAAAGAATGAGAGAAAA+GGG 0.458277 1_1:+710089 None:intergenic
TGCTCGAATATGTAACTGGC+GGG 0.458447 1_1:-715823 Msa0000060:CDS
AAGCCGAAGGTCGGATCCGC+AGG 0.459082 1_1:+710557 None:intergenic
ACACGAGGGAGCAGCTTCAC+AGG 0.460831 1_1:+721911 None:intergenic
CCATGTCGATTGAACTTGAC+AGG 0.466251 1_1:+710520 None:intergenic
ATAGATAATTAATCTCTTCA+CGG 0.468251 1_1:+710410 None:intergenic
CTCACCATGATAAACATTAA+GGG 0.468814 1_1:+718966 None:intergenic
TGAGAATAGTACAAAATGTT+TGG 0.471771 1_1:-718137 Msa0000060:CDS
GGGTTGCTGCACCTTTGGCT+GGG 0.473080 1_1:-710825 Msa0000060:CDS
AAAAGTTCAAATAGTTAATG+AGG 0.473378 1_1:-720425 Msa0000060:CDS
TTTAGCATGGTGATACTTTG+TGG 0.473785 1_1:+718073 None:intergenic
TATTTGGGAGCATATACAAA+AGG 0.480461 1_1:+710196 None:intergenic
TATAACAAATGTAAATTTGA+GGG 0.480996 1_1:-710008 Msa0000060:three_prime_UTR
AATAATAGGCTGTTTACTCC+AGG 0.481040 1_1:-710244 Msa0000060:three_prime_UTR
TGATAAATAAGAGGTTGATC+AGG 0.483191 1_1:+711629 None:intergenic
TGCCGCAAGTCCAGAAGTCT+GGG 0.483250 1_1:+711577 None:intergenic
ATCGCGGAGTTGGTAACATA+TGG 0.485351 1_1:-720281 Msa0000060:CDS
CTTGCGGCAGTCCCAAAGCC+AGG 0.489545 1_1:-711563 Msa0000060:CDS
CATTATCAGCCACTATCCTC+AGG 0.489951 1_1:+718459 None:intergenic
TATTTATTGATTAACGAAAG+AGG 0.490540 1_1:+722064 None:intergenic
GTGACCCTTAATGTTTATCA+TGG 0.490989 1_1:-718970 Msa0000060:intron
GAGTCAATGCTGGATGGGCT+TGG 0.499863 1_1:-715661 Msa0000060:CDS
CTCAGGGAAGGAAGAAGGAC+TGG 0.500829 1_1:+718476 None:intergenic
CTATAACAAATGTAAATTTG+AGG 0.500896 1_1:-710009 Msa0000060:three_prime_UTR
GAGGGATCATCATTTACTGC+TGG 0.501664 1_1:-711885 Msa0000060:CDS
AAGATGGATATTGGCGTTCA+GGG 0.503124 1_1:-710467 Msa0000060:CDS
ATATAGCATGTTCACTCTGT+AGG 0.504013 1_1:+720043 None:intergenic
TCAAAGACTTACAATGAATC+GGG 0.504985 1_1:+710277 None:intergenic
ACTGAGATCAATCGCGGAGT+TGG 0.505640 1_1:-720291 Msa0000060:CDS
AAATAATGTTATTATAACAT+AGG 0.508271 1_1:+710039 None:intergenic
GCCACTCTGCTGCAAACTAA+AGG 0.509771 1_1:-715764 Msa0000060:intron
TTACTGTTCTTTGTGATGAG+TGG 0.511766 1_1:-712254 Msa0000060:CDS
AGAACAGTAATAAGAAGGTC+AGG 0.512605 1_1:+712267 None:intergenic
TCACAAGGATGATAAATAAG+AGG 0.513331 1_1:+711620 None:intergenic
TTCATTTCCATTATATGTCG+AGG 0.514825 1_1:-719046 Msa0000060:CDS
ACACCTGCGGATCCGACCTT+CGG 0.515956 1_1:-710560 Msa0000060:CDS
ACTTAATAATTTCCCACCCC+TGG 0.520721 1_1:+710226 None:intergenic
CACAAAGAACAGTAATAAGA+AGG 0.521501 1_1:+712262 None:intergenic
GGTTACTGATACAGAAATCC+AGG 0.522225 1_1:-718638 Msa0000060:intron
CTCGTCTGCTCCTGTTTCAG+AGG 0.524053 1_1:-710323 Msa0000060:CDS
AGAATTCAACAACCACCGCC+TGG 0.525349 1_1:-713140 Msa0000060:CDS
GGTTTGTAGATTAGAAATTG+TGG 0.527246 1_1:-710166 Msa0000060:three_prime_UTR
TGAATAGAACAATTCGAAGA+AGG 0.529915 1_1:+722114 None:intergenic
CTTGATGAGTCAATGCTGGA+TGG 0.531467 1_1:-715667 Msa0000060:CDS
ACTCACTATAAGGAAGCAAC+TGG 0.532831 1_1:+713164 None:intergenic
ATATATTAGAACGGCAAAAG+AGG 0.536415 1_1:+713224 None:intergenic
TCAGATGTAAAACCATGGTC+AGG 0.536784 1_1:+718190 None:intergenic
CTCTCGAAAGCAATTCTACA+AGG 0.537045 1_1:+710952 None:intergenic
CTATCCTCAGGGAAGGAAGA+AGG 0.539069 1_1:+718471 None:intergenic
CCTGTCAAGTTCAATCGACA+TGG 0.541222 1_1:-710520 Msa0000060:CDS
ACAGTTTGTAGCAACTGAAG+TGG 0.543649 1_1:+720084 None:intergenic
TGCTTTCTAGCAGTCTCTGT+AGG 0.543729 1_1:-710910 Msa0000060:CDS
AACTTGACAGGATCCAGAAA+AGG 0.544511 1_1:+710532 None:intergenic
GCAGTTCAAATGTGGCTTTG+AGG 0.544871 1_1:-718042 Msa0000060:intron
AGAGTGTAATCCAAAACACT+TGG 0.547079 1_1:+722020 None:intergenic
GTGGTAAATAAGAGACAGAT+AGG 0.547561 1_1:+710992 None:intergenic
GAATGCTTATCGTCAACCCT+GGG 0.550722 1_1:+710592 None:intergenic
ACTCCATACGGCTTCTTCAA+AGG 0.551252 1_1:+710853 None:intergenic
ATAATAGGCTGTTTACTCCA+GGG 0.555328 1_1:-710243 Msa0000060:three_prime_UTR
TTTCATGGAAAAGCAAGTTG+TGG 0.556128 1_1:-720151 Msa0000060:CDS
TGTGAAGCTGCTCCCTCGTG+TGG 0.558203 1_1:-721909 Msa0000060:five_prime_UTR
TGAATGCTTATCGTCAACCC+TGG 0.558684 1_1:+710591 None:intergenic
GAGTGTAATCCAAAACACTT+GGG 0.560225 1_1:+722021 None:intergenic
TACTGCTGTAGATGAAATTG+AGG 0.561060 1_1:-718591 Msa0000060:CDS
CTTGTAGAATTGCTTTCGAG+AGG 0.561303 1_1:-710951 Msa0000060:CDS
GAGTGGAGAAAGTGCAAAAG+AGG 0.562759 1_1:-712237 Msa0000060:intron
TTGCCTTTGAAGAAGCCGTA+TGG 0.562962 1_1:-710856 Msa0000060:CDS
ATTTGGGAGCATATACAAAA+GGG 0.563491 1_1:+710197 None:intergenic
CTTTCAACGATTCCAGGCGG+TGG 0.565185 1_1:+713128 None:intergenic
TTGTAGAATTGCTTTCGAGA+GGG 0.565328 1_1:-710950 Msa0000060:CDS
CATGGAAAAGCAAGTTGTGG+GGG 0.566133 1_1:-720148 Msa0000060:CDS
CGTGAGTGAATATTTGAAGT+TGG 0.567214 1_1:+711663 None:intergenic
ACTGCTACCATTATTTAGCA+TGG 0.567549 1_1:+718060 None:intergenic
TGTAGAATTGCTTTCGAGAG+GGG 0.570259 1_1:-710949 Msa0000060:CDS
AGACACTATGGGATGGTGGT+TGG 0.570274 1_1:-713195 Msa0000060:CDS
GAAAGTAGCTCAACAAGAGA+TGG 0.572239 1_1:-714659 Msa0000060:CDS
CTGGAATTCCTGATGTTGAA+AGG 0.572289 1_1:-718535 Msa0000060:CDS
GATATTGGCGTTCAGGGACG+AGG 0.572349 1_1:-710461 Msa0000060:CDS
ACAAGAGATGGTATTGCATG+TGG 0.573640 1_1:-714647 Msa0000060:CDS
AGAACTTGATGAGTCAATGC+TGG 0.573881 1_1:-715671 Msa0000060:CDS
GATCATGCTCTCCTCATGAA+AGG 0.577505 1_1:+719011 None:intergenic
AGCCCAGACTTCTGGACTTG+CGG 0.578342 1_1:-711579 Msa0000060:CDS
TCTCTGTAGGAACTTCTGGT+TGG 0.581439 1_1:-710897 Msa0000060:CDS
GTCCTTTACAAAATGTTCTG+GGG 0.585506 1_1:-718233 Msa0000060:CDS
TTCATCTACAGCAGTAGTAA+CGG 0.585580 1_1:+718598 None:intergenic
TAACGGTAGAGTTTGAATCT+GGG 0.586651 1_1:+718615 None:intergenic
CAGAGTGGCAAGCACACTCA+AGG 0.588155 1_1:+715778 None:intergenic
GGGAGGTGTTGTATGTGAAG+AGG 0.589564 1_1:+710297 None:intergenic
GCAGTAAATGATGATCCCTC+AGG 0.591553 1_1:+711888 None:intergenic
ATCATTGAAGAGCAATTGGT+GGG 0.593546 1_1:-719701 Msa0000060:intron
TAGGCTGTTTACTCCAGGGG+TGG 0.594157 1_1:-710239 Msa0000060:three_prime_UTR
GAATAGTACAAAATGTTTGG+TGG 0.595880 1_1:-718134 Msa0000060:CDS
GCTCGAATATGTAACTGGCG+GGG 0.596586 1_1:-715822 Msa0000060:CDS
AAGAATGCACGAGTTGGTGA+AGG 0.598647 1_1:-711859 Msa0000060:intron
AGGCTGTTTACTCCAGGGGT+GGG 0.598779 1_1:-710238 Msa0000060:three_prime_UTR
CAAGGCACAGCATTAACTGC+AGG 0.599279 1_1:+710970 None:intergenic
CAGTCCTTCTTCCTTCCCTG+AGG 0.599823 1_1:-718475 Msa0000060:CDS
GCAACCCGAACAACTCCATA+CGG 0.600791 1_1:+710841 None:intergenic
TTTGTGCAGCAAGCTTTGGT+TGG 0.601588 1_1:-714716 Msa0000060:intron
TCCTTTACAAAATGTTCTGG+GGG 0.604093 1_1:-718232 Msa0000060:CDS
CATCATTGAAGAGCAATTGG+TGG 0.606557 1_1:-719702 Msa0000060:intron
ACGGTTTCAAGCTTGAGCAA+AGG 0.607032 1_1:+710361 None:intergenic
TTGATGAGTCAATGCTGGAT+GGG 0.608643 1_1:-715666 Msa0000060:CDS
GATACGCTTTGCCTTTCATG+AGG 0.613444 1_1:-719022 Msa0000060:CDS
TAATGGTAGCAGTTCAAATG+TGG 0.613686 1_1:-718050 Msa0000060:CDS
ACGATCTTTGGATCTCCAGA+AGG 0.614066 1_1:+721818 None:intergenic
AATAGTTAATGAGGTTAACA+AGG 0.616044 1_1:-720416 Msa0000060:intron
CGAGCTTGATATGTCTAGCA+CGG 0.618068 1_1:+710342 None:intergenic
TAATAGGCTGTTTACTCCAG+GGG 0.620480 1_1:-710242 Msa0000060:three_prime_UTR
TATATCGGCAGAGACACTAT+GGG 0.620814 1_1:-713206 Msa0000060:CDS
CACGAGGGAGCAGCTTCACA+GGG 0.621408 1_1:+721912 None:intergenic
GCAGCAAGCTTTGGTTGGCG+AGG 0.622163 1_1:-714711 Msa0000060:intron
TCATGGAAAAGCAAGTTGTG+GGG 0.623697 1_1:-720149 Msa0000060:CDS
TCCAGAAAAGGTAAAGCCGA+AGG 0.624095 1_1:+710544 None:intergenic
ACCTTTAGTTTGCAGCAGAG+TGG 0.624385 1_1:+715763 None:intergenic
AGAGGTTGTGAAGTTGAAGA+TGG 0.629260 1_1:+722082 None:intergenic
GAAGCTGCTCCCTCGTGTGG+AGG 0.629950 1_1:-721906 Msa0000060:five_prime_UTR
TCAGCCACTATCCTCAGGGA+AGG 0.630244 1_1:+718464 None:intergenic
TTGCTCGAATATGTAACTGG+CGG 0.630530 1_1:-715824 Msa0000060:CDS
AAATTACACCAGTCTGAACA+AGG 0.632553 1_1:+709963 None:intergenic
ATTATCAGCCACTATCCTCA+GGG 0.634284 1_1:+718460 None:intergenic
CAAGAGATGGTATTGCATGT+GGG 0.638714 1_1:-714646 Msa0000060:CDS
CAACTTCAAATATTCACTCA+CGG 0.640284 1_1:-711662 Msa0000060:CDS
GGCACAGCATTAACTGCAGG+TGG 0.644774 1_1:+710973 None:intergenic
GAAAAGGTAAAGCCGAAGGT+CGG 0.649533 1_1:+710548 None:intergenic
CATACATTGCACCCAGCCAA+AGG 0.653598 1_1:+710814 None:intergenic
ACCTGAAATCTACGTACACG+AGG 0.655210 1_1:+714305 None:intergenic
TGCTTTCAGATGTAAAACCA+TGG 0.655216 1_1:+718185 None:intergenic
TGGAGAAAGAATGCACGAGT+TGG 0.656207 1_1:-711865 Msa0000060:CDS
CTGTCAAGTTCAATCGACAT+GGG 0.661419 1_1:-710519 Msa0000060:CDS
ACTGCTCGATCCTCCACACG+AGG 0.666022 1_1:+721896 None:intergenic
TTCTTTAGGAGCTCTAACGT+AGG 0.667018 1_1:-710076 Msa0000060:three_prime_UTR
GCAGAGACACTATGGGATGG+TGG 0.668131 1_1:-713199 Msa0000060:CDS
ATGACAACAGCTCTTCATTG+CGG 0.675788 1_1:+719856 None:intergenic
GATTAATTATCTATGCGATG+AGG 0.677257 1_1:-710401 Msa0000060:CDS
GAATTCGTACGATGATCACA+AGG 0.678544 1_1:+711605 None:intergenic
TCTGAAGAACTAGATGAGCA+TGG 0.679852 1_1:+718103 None:intergenic
AATGGCTATATACCTGACCA+TGG 0.680522 1_1:-718202 Msa0000060:CDS
CCGACAGAAGATATACCTGA+GGG 0.680937 1_1:-711903 Msa0000060:intron
TCAGAAAAGAACATCCGAGG+TGG 0.684064 1_1:+712078 None:intergenic
ATTCAAAATGGTTACACCTG+CGG 0.684487 1_1:-710573 Msa0000060:CDS
TCGGCAGAGACACTATGGGA+TGG 0.685327 1_1:-713202 Msa0000060:CDS
TGAGGCACTGAGATCAATCG+CGG 0.687812 1_1:-720297 Msa0000060:CDS
CCTTCAGAAAAGAACATCCG+AGG 0.687998 1_1:+712075 None:intergenic
TCTCTGCCGATATATTAGAA+CGG 0.688279 1_1:+713215 None:intergenic
TTGATTCTCATAGAACCATG+TGG 0.697365 1_1:-721845 Msa0000060:exon
TCCGACAGAAGATATACCTG+AGG 0.698686 1_1:-711904 Msa0000060:intron
CCAGGCACTGAAATGAACCT+CGG 0.700391 1_1:-711545 Msa0000060:intron
AGTGTAATCCAAAACACTTG+GGG 0.700987 1_1:+722022 None:intergenic
AAGGGTCACAGCACGTACAG+CGG 0.707220 1_1:+718984 None:intergenic
AAGACTTACAATGAATCGGG+AGG 0.713955 1_1:+710280 None:intergenic
TTACTTTCAACGATTCCAGG+CGG 0.714788 1_1:+713125 None:intergenic
CTGCTCGATCCTCCACACGA+GGG 0.722045 1_1:+721897 None:intergenic
TCTCCAGAAGGAAAACCACA+TGG 0.725359 1_1:+721830 None:intergenic
TTTGAGAAGTAATCTGTGTG+AGG 0.732490 1_1:+718793 None:intergenic
CCTGAAATCTACGTACACGA+GGG 0.737169 1_1:+714306 None:intergenic
TCACAGCACGTACAGCGGCG+CGG 0.738207 1_1:+718989 None:intergenic
GTTGACCAGGATATGCAAAG+TGG 0.760072 1_1:-718355 Msa0000060:intron
TTACACCAGTCTGAACAAGG+AGG 0.784314 1_1:+709966 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATAATTGTGATTTTATT+AGG - chr1_1:711301-711320 Msa0000060:intron 10.0%
!! AATATATTAAAAATATTCCT+CGG + chr1_1:714457-714476 None:intergenic 10.0%
!!! ATTTAAAACAAAAAATAAAG+GGG - chr1_1:714485-714504 Msa0000060:intron 10.0%
!! ATTAACTAAAATCAAATTAA+CGG + chr1_1:715461-715480 None:intergenic 10.0%
!! ATATAATATTAACAATAAGA+TGG - chr1_1:717117-717136 Msa0000060:intron 10.0%
!! AATATTAAAAATAAGTAAGT+TGG - chr1_1:719461-719480 Msa0000060:intron 10.0%
!! AAAGTTATAAATAAGTATTT+AGG + chr1_1:720654-720673 None:intergenic 10.0%
!! AAATAAAACACAATAAAATA+GGG - chr1_1:721009-721028 Msa0000060:intron 10.0%
!!! CTGTTTTTATATTTTAATTT+AGG - chr1_1:721075-721094 Msa0000060:intron 10.0%
!! AAATAATGTTATTATAACAT+AGG + chr1_1:722066-722085 None:intergenic 10.0%
!! ATGATAATATAGTGAATAAT+TGG - chr1_1:710454-710473 Msa0000060:CDS 15.0%
!! ATAATACAATTGATAAATAG+AGG + chr1_1:711765-711784 None:intergenic 15.0%
!! TTTATCAATTGTATTATTTG+TGG - chr1_1:711768-711787 Msa0000060:intron 15.0%
!! AGTTAGCAAAATTATAAAAA+GGG + chr1_1:712359-712378 None:intergenic 15.0%
!! TAGTTAGCAAAATTATAAAA+AGG + chr1_1:712360-712379 None:intergenic 15.0%
!! AATTATAAATCTCACAATAT+TGG + chr1_1:712877-712896 None:intergenic 15.0%
!!! TTGTGAGATTTATAATTTTA+TGG - chr1_1:712880-712899 Msa0000060:intron 15.0%
!! ATAAGAATATTAACAGAAAA+TGG + chr1_1:714120-714139 None:intergenic 15.0%
!! TTAATATTCTTATGTTAGAT+TGG - chr1_1:714127-714146 Msa0000060:intron 15.0%
!! TAATATTCTTATGTTAGATT+GGG - chr1_1:714128-714147 Msa0000060:intron 15.0%
!! TTAACTAAAATCAAATTAAC+GGG + chr1_1:715460-715479 None:intergenic 15.0%
!!! AAATTTTAAAATATAGAACG+CGG + chr1_1:716691-716710 None:intergenic 15.0%
!! TGTTTATCTTAATAAGATTA+AGG - chr1_1:717484-717503 Msa0000060:intron 15.0%
!! GAACAAATAAAAATAAAGTT+TGG - chr1_1:718586-718605 Msa0000060:CDS 15.0%
!! TATTCTCTCATAATAAATAA+GGG + chr1_1:719445-719464 None:intergenic 15.0%
!! ATATTCTCTCATAATAAATA+AGG + chr1_1:719446-719465 None:intergenic 15.0%
!! AAATAAGAGTAATTGATATA+GGG - chr1_1:719487-719506 Msa0000060:intron 15.0%
!! TGGAACAAATTTAAATTTAT+TGG - chr1_1:719517-719536 Msa0000060:intron 15.0%
!!! TATATATTTATTTCTTTAGC+TGG - chr1_1:720082-720101 Msa0000060:CDS 15.0%
!! ATTTCATTTAATGATTGTTA+GGG + chr1_1:720954-720973 None:intergenic 15.0%
!! CAAATAAAACACAATAAAAT+AGG - chr1_1:721008-721027 Msa0000060:intron 15.0%
!! AATAAAACACAATAAAATAG+GGG - chr1_1:721010-721029 Msa0000060:intron 15.0%
!! GTAAAAATAATTGTAACATT+CGG + chr1_1:721432-721451 None:intergenic 15.0%
!! TTGACCTAATTTATAATAAT+AGG - chr1_1:721844-721863 Msa0000060:exon 15.0%
!! TACAAACCTAATATATATTT+GGG + chr1_1:721924-721943 None:intergenic 15.0%
!! TATAACAAATGTAAATTTGA+GGG - chr1_1:722094-722113 Msa0000060:five_prime_UTR 15.0%
!! TTTAGATTAATGAATCTTCT+CGG + chr1_1:709925-709944 None:intergenic 20.0%
!!! TATTTATTGATTAACGAAAG+AGG + chr1_1:710041-710060 None:intergenic 20.0%
!!! ATTATATTTGTTGATTAACG+AGG + chr1_1:710355-710374 None:intergenic 20.0%
!! TTGGATAAACTAAATTTGTA+TGG - chr1_1:710473-710492 Msa0000060:CDS 20.0%
!!! CAATTTTCTCAAAAGTAAAA+TGG + chr1_1:710805-710824 None:intergenic 20.0%
!!! AAGAGACAATTATTTTGAAA+CGG + chr1_1:711037-711056 None:intergenic 20.0%
!! TCTAAATTGACAATTACTTT+GGG + chr1_1:711076-711095 None:intergenic 20.0%
!! TTCTAAATTGACAATTACTT+TGG + chr1_1:711077-711096 None:intergenic 20.0%
!! AAAATTAAATAATGCTGCAT+CGG + chr1_1:711102-711121 None:intergenic 20.0%
!! TGATGAAATTCAATAAACAA+GGG + chr1_1:711138-711157 None:intergenic 20.0%
!! TTGATGAAATTCAATAAACA+AGG + chr1_1:711139-711158 None:intergenic 20.0%
!! TATTAGGATTTATATGTCAT+TGG - chr1_1:711317-711336 Msa0000060:intron 20.0%
!! TAGATTTATTCCCTTAATTA+GGG - chr1_1:711347-711366 Msa0000060:intron 20.0%
!! AAAAGTTCAAATAGTTAATG+AGG - chr1_1:711677-711696 Msa0000060:CDS 20.0%
!!! AGAAAGTTTTAATCATAAGA+TGG + chr1_1:711722-711741 None:intergenic 20.0%
!! AATCAAATGAATACGTAATT+AGG + chr1_1:712225-712244 None:intergenic 20.0%
!!! CATACTACATATCTTTTTTA+AGG - chr1_1:712266-712285 Msa0000060:CDS 20.0%
!! AAAAAGAAGAAATGAAAGAA+AGG - chr1_1:712727-712746 Msa0000060:intron 20.0%
!! TTAATTATACTTGAAAGACT+GGG + chr1_1:712926-712945 None:intergenic 20.0%
!! TTCTAATAATGTTCTTTACT+GGG - chr1_1:712947-712966 Msa0000060:intron 20.0%
!! TAAGTACAGTAAATACATAT+GGG + chr1_1:713012-713031 None:intergenic 20.0%
!! TTAAGTACAGTAAATACATA+TGG + chr1_1:713013-713032 None:intergenic 20.0%
!! AGTTATGAAAGAAATTGAAA+AGG + chr1_1:713194-713213 None:intergenic 20.0%
!!! CATATTTCTTTTTCTTTTTC+TGG - chr1_1:714163-714182 Msa0000060:intron 20.0%
!!! TTTTTATCCAACCAAATAAA+GGG - chr1_1:715833-715852 Msa0000060:CDS 20.0%
!!! TTCACCCTTTTAAAAATTAA+GGG - chr1_1:716063-716082 Msa0000060:intron 20.0%
!!! AGAACCCTTAATTTTTAAAA+GGG + chr1_1:716070-716089 None:intergenic 20.0%
!! CTACAAAACGAAATATATTA+AGG + chr1_1:716413-716432 None:intergenic 20.0%
!!! ATATTTTAAAATGGCCAAAA+TGG + chr1_1:716543-716562 None:intergenic 20.0%
!!! CAAATGCTCATATTTTAAAA+TGG + chr1_1:716552-716571 None:intergenic 20.0%
!!! AATTTTAAAATATAGAACGC+GGG + chr1_1:716690-716709 None:intergenic 20.0%
!! ATTATTATCCACATAATTCT+TGG - chr1_1:716866-716885 Msa0000060:intron 20.0%
!! CTTCATATAAAATAAACCAA+GGG + chr1_1:717672-717691 None:intergenic 20.0%
!! ACAGTTAAATCTATACTATA+TGG - chr1_1:717862-717881 Msa0000060:intron 20.0%
!! ATATAAAGTTTACCTATTGA+AGG - chr1_1:718467-718486 Msa0000060:CDS 20.0%
!!! TATTTTTATTTGTTCACGTT+AGG + chr1_1:718581-718600 None:intergenic 20.0%
!! TCTTTATTATTCATGGTTTA+CGG - chr1_1:718718-718737 Msa0000060:intron 20.0%
!!! AAATCAAAGAACATTTTTTC+TGG + chr1_1:719349-719368 None:intergenic 20.0%
!! AATAAGGGTTTCTTATAATA+AGG + chr1_1:719430-719449 None:intergenic 20.0%
!! GAAATAAGAGTAATTGATAT+AGG - chr1_1:719486-719505 Msa0000060:intron 20.0%
!! AATAAGAGTAATTGATATAG+GGG - chr1_1:719488-719507 Msa0000060:intron 20.0%
!! CAACTAATACAATAAGTATA+TGG - chr1_1:719638-719657 Msa0000060:intron 20.0%
!!! TCTTATTTATTTTCTTTAGC+TGG - chr1_1:720120-720139 Msa0000060:CDS 20.0%
!! TGTAAAGTTCTTCATTATAA+AGG + chr1_1:720380-720399 None:intergenic 20.0%
!! TATAATGAAGAACTTTACAT+TGG - chr1_1:720381-720400 Msa0000060:intron 20.0%
!! TTTCATTTAATGATTGTTAG+GGG + chr1_1:720953-720972 None:intergenic 20.0%
!! CATTTCATTTAATGATTGTT+AGG + chr1_1:720955-720974 None:intergenic 20.0%
!! ATAAAACACAATAAAATAGG+GGG - chr1_1:721011-721030 Msa0000060:intron 20.0%
!! ATAGATAATTAATCTCTTCA+CGG + chr1_1:721695-721714 None:intergenic 20.0%
!! ACAGCCTATTATTATAAATT+AGG + chr1_1:721851-721870 None:intergenic 20.0%
!! CTACAAACCTAATATATATT+TGG + chr1_1:721925-721944 None:intergenic 20.0%
!! TAACATAGGAGAAAAATATA+GGG + chr1_1:722052-722071 None:intergenic 20.0%
!! ATAACATAGGAGAAAAATAT+AGG + chr1_1:722053-722072 None:intergenic 20.0%
!! CTATAACAAATGTAAATTTG+AGG - chr1_1:722093-722112 Msa0000060:five_prime_UTR 20.0%
!!! GTGTGTTATTTTTGATTATA+TGG - chr1_1:722171-722190 Msa0000060:five_prime_UTR 20.0%
!! TGGTTCTACTAAAAATCAAT+TGG - chr1_1:710853-710872 Msa0000060:CDS 25.0%
! TCACATATGTAAGTTATCAT+TGG + chr1_1:710908-710927 None:intergenic 25.0%
! TTATTAGATATGTTCTTCCT+TGG - chr1_1:711000-711019 Msa0000060:CDS 25.0%
!! AATAAACAAGGGTATAATAG+TGG + chr1_1:711127-711146 None:intergenic 25.0%
! CTCAAAATAATAGTCGTTTA+AGG + chr1_1:711271-711290 None:intergenic 25.0%
!!! AAACGACTATTATTTTGAGA+CGG - chr1_1:711272-711291 Msa0000060:intron 25.0%
! CTAGATTTATTCCCTTAATT+AGG - chr1_1:711346-711365 Msa0000060:intron 25.0%
! AGATTTATTCCCTTAATTAG+GGG - chr1_1:711348-711367 Msa0000060:intron 25.0%
! ATTCTCATGTTAGATAGAAT+TGG - chr1_1:711569-711588 Msa0000060:CDS 25.0%
! TTCTCATGTTAGATAGAATT+GGG - chr1_1:711570-711589 Msa0000060:CDS 25.0%
! AATAGTTAATGAGGTTAACA+AGG - chr1_1:711686-711705 Msa0000060:intron 25.0%
! TCAATTGTATTATTTGTGGT+AGG - chr1_1:711772-711791 Msa0000060:intron 25.0%
! GCATTTAAACAATTATACCA+TGG + chr1_1:711898-711917 None:intergenic 25.0%
! TAAAAAGGGACAAAAAAAAG+AGG + chr1_1:712345-712364 None:intergenic 25.0%
!!! CTTTGAAATTTTATTGCATC+AGG - chr1_1:712703-712722 Msa0000060:intron 25.0%
! AGAAAGGAGGAAAAAATTAA+CGG - chr1_1:712743-712762 Msa0000060:intron 25.0%
!!! AGGACTAACAATTTTTCAAT+AGG + chr1_1:712840-712859 None:intergenic 25.0%
! GTTAATTATACTTGAAAGAC+TGG + chr1_1:712927-712946 None:intergenic 25.0%
! CTTCTAATAATGTTCTTTAC+TGG - chr1_1:712946-712965 Msa0000060:intron 25.0%
!!! GGTGAGTTTTTTTTGTTTTT+TGG - chr1_1:713153-713172 Msa0000060:CDS 25.0%
!! AATTGAAAAGGCATAGAAAA+CGG + chr1_1:713182-713201 None:intergenic 25.0%
!! TTGTGTACTTAATTTTCAGT+TGG - chr1_1:713252-713271 Msa0000060:intron 25.0%
! ATGTATGAAACTTCACTTTA+TGG - chr1_1:713663-713682 Msa0000060:intron 25.0%
! TGAGAATAGTACAAAATGTT+TGG - chr1_1:713965-713984 Msa0000060:intron 25.0%
! ATGGAATATAAATCAGTATG+TGG + chr1_1:714101-714120 None:intergenic 25.0%
!! CAAATTTTCACTTAAATGAC+TGG + chr1_1:714280-714299 None:intergenic 25.0%
!!! ATGATGGTGTTTTTGATTTT+TGG - chr1_1:714350-714369 Msa0000060:CDS 25.0%
! AAGGATTAAATTTACAATCC+TGG - chr1_1:714386-714405 Msa0000060:intron 25.0%
! AGGATTAAATTTACAATCCT+GGG - chr1_1:714387-714406 Msa0000060:intron 25.0%
! TTAATAGGATTAAGATTCCT+AGG + chr1_1:714422-714441 None:intergenic 25.0%
! CGGAATTTAAACACTTTAAT+AGG + chr1_1:714437-714456 None:intergenic 25.0%
!! ATTAAAGTGTTTAAATTCCG+AGG - chr1_1:714437-714456 Msa0000060:intron 25.0%
!! CTACCAAGAAATTTAAAACA+GGG + chr1_1:715167-715186 None:intergenic 25.0%
! AAATTAACCTTGAACAACAT+GGG + chr1_1:715224-715243 None:intergenic 25.0%
! ATAAAACAAAACAATGAGAG+CGG + chr1_1:715492-715511 None:intergenic 25.0%
! ACATAAACAATAAACACAGT+GGG + chr1_1:715607-715626 None:intergenic 25.0%
! AACATAAACAATAAACACAG+TGG + chr1_1:715608-715627 None:intergenic 25.0%
!! ATACCATATTTCTACAGATA+AGG + chr1_1:715700-715719 None:intergenic 25.0%
!! CTTTTTATCCAACCAAATAA+AGG - chr1_1:715832-715851 Msa0000060:CDS 25.0%
!!! CTTAATTTTTAAAAGGGTGA+AGG + chr1_1:716064-716083 None:intergenic 25.0%
!!! CTTCACCCTTTTAAAAATTA+AGG - chr1_1:716062-716081 Msa0000060:intron 25.0%
!! CAGAACCCTTAATTTTTAAA+AGG + chr1_1:716071-716090 None:intergenic 25.0%
!! TGATTTACTGTATTGACAAA+GGG + chr1_1:716592-716611 None:intergenic 25.0%
! AAGTTTATATTGTTCTTGCT+AGG - chr1_1:716657-716676 Msa0000060:intron 25.0%
! TTTACAGGTTACAGTAATAA+TGG + chr1_1:716792-716811 None:intergenic 25.0%
! TATTACTGTAACCTGTAAAT+TGG - chr1_1:716793-716812 Msa0000060:intron 25.0%
!!! TTTTTTCCTTTCCAATTTAC+AGG + chr1_1:716807-716826 None:intergenic 25.0%
! GAAATGAATTTGTCTCAATT+AGG - chr1_1:717035-717054 Msa0000060:intron 25.0%
! TGTTGTAAGCAAATTAAGTT+TGG - chr1_1:717075-717094 Msa0000060:intron 25.0%
! AGAAACAATTAGAAGATTAG+TGG - chr1_1:717165-717184 Msa0000060:intron 25.0%
!!! GAAATAGGGATCATTTTAAT+AGG - chr1_1:717254-717273 Msa0000060:intron 25.0%
!!! ATTTCGACTTTTGATTGATT+CGG - chr1_1:717327-717346 Msa0000060:intron 25.0%
! CAAAAGTGAAAATATACAGT+AGG + chr1_1:717556-717575 None:intergenic 25.0%
!! TGATTATTATTTTCTTCCCT+TGG - chr1_1:717653-717672 Msa0000060:intron 25.0%
! CCTTCATATAAAATAAACCA+AGG + chr1_1:717673-717692 None:intergenic 25.0%
!!! CCTTGGTTTATTTTATATGA+AGG - chr1_1:717670-717689 Msa0000060:intron 25.0%
! AACATTGTAAGCAAAATGTA+AGG + chr1_1:717726-717745 None:intergenic 25.0%
!! TTTTGCTTACAATGTTTTAC+AGG - chr1_1:717730-717749 Msa0000060:intron 25.0%
!!! ATCTTTTCATTTTCAGGTAT+TGG - chr1_1:717913-717932 Msa0000060:intron 25.0%
! AAAGTCGTTTATGTAAACTT+GGG - chr1_1:718063-718082 Msa0000060:CDS 25.0%
! TAAAATCAACCACAATATTC+TGG + chr1_1:718537-718556 None:intergenic 25.0%
! TAATCATATCCTATAGAATC+TGG + chr1_1:718679-718698 None:intergenic 25.0%
! ATTACAATGCTATAGTCAAA+TGG - chr1_1:718695-718714 Msa0000060:intron 25.0%
! CAAATGGTCTTTATTATTCA+TGG - chr1_1:718711-718730 Msa0000060:intron 25.0%
!!! ATATATGGGATGTTTTTTTC+AGG - chr1_1:718836-718855 Msa0000060:intron 25.0%
!! GTTTTTGCAAGTTATATATC+TGG + chr1_1:719177-719196 None:intergenic 25.0%
!! TTTTCCTGATATGAAATGAT+CGG - chr1_1:719202-719221 Msa0000060:intron 25.0%
! ATTTATCCCTAAATTTCAGA+AGG - chr1_1:719309-719328 Msa0000060:intron 25.0%
!!! ACTATTTTAAGACGTTTTCT+TGG - chr1_1:719557-719576 Msa0000060:intron 25.0%
!! GATTATTGACTATACCTAAA+GGG + chr1_1:719688-719707 None:intergenic 25.0%
!! TGATTATTGACTATACCTAA+AGG + chr1_1:719689-719708 None:intergenic 25.0%
!! AAAAGGAAGTTAAAGGTTTT+TGG - chr1_1:719812-719831 Msa0000060:intron 25.0%
! TAAATATTCGAAAAGCTACA+AGG + chr1_1:720064-720083 None:intergenic 25.0%
! AAAGAAAATAAATAAGAGCC+TGG + chr1_1:720117-720136 None:intergenic 25.0%
! ACAAGACAATAAATAAGTGT+AGG + chr1_1:720273-720292 None:intergenic 25.0%
! TATGGTAAATATCATAAGTG+AGG + chr1_1:720718-720737 None:intergenic 25.0%
!! TTTTCTTACAAAAGACTGAA+GGG + chr1_1:720856-720875 None:intergenic 25.0%
!! TTTTTCTTACAAAAGACTGA+AGG + chr1_1:720857-720876 None:intergenic 25.0%
! GTTTGTTTAAATTGCATTCA+TGG + chr1_1:721410-721429 None:intergenic 25.0%
! TATGCTCCCAAATATATATT+AGG - chr1_1:721915-721934 Msa0000060:five_prime_UTR 25.0%
! AAAGGGAAAATTTACAAATC+AGG + chr1_1:721999-722018 None:intergenic 25.0%
TGAATAGAACAATTCGAAGA+AGG + chr1_1:709991-710010 None:intergenic 30.0%
!! ATCCAAAGATCGTTTTTCAT+TGG - chr1_1:710294-710313 Msa0000060:CDS 30.0%
ATCCAATGAAAAACGATCTT+TGG + chr1_1:710299-710318 None:intergenic 30.0%
GGTAGATAACATGTCAATTA+CGG - chr1_1:710494-710513 Msa0000060:CDS 30.0%
AAGATATGACTTGATTACTC+AGG - chr1_1:710519-710538 Msa0000060:CDS 30.0%
!! CTTACATATTGACTCTAATC+CGG - chr1_1:710752-710771 Msa0000060:intron 30.0%
GAGATTGATACTTCATTTGT+TGG - chr1_1:710833-710852 Msa0000060:CDS 30.0%
!!! GACAATTATTTTGAAACGGA+TGG + chr1_1:711033-711052 None:intergenic 30.0%
TCCACTAACTGCAATTAATA+AGG - chr1_1:711169-711188 Msa0000060:intron 30.0%
CCACTAACTGCAATTAATAA+GGG - chr1_1:711170-711189 Msa0000060:intron 30.0%
! AGGTTTGTGCACAATTTTTA+AGG + chr1_1:711251-711270 None:intergenic 30.0%
AATTTATGTATCCTAGCTTG+TGG - chr1_1:711922-711941 Msa0000060:intron 30.0%
!! TACGTATTCTAAAACTTAGC+AGG - chr1_1:711983-712002 Msa0000060:intron 30.0%
ACTAGTACCTTAATGTCTTA+TGG - chr1_1:712376-712395 Msa0000060:intron 30.0%
ATGATGACCATAAGACATTA+AGG + chr1_1:712386-712405 None:intergenic 30.0%
ATTAACAGAGCAAGAAGATT+CGG + chr1_1:712488-712507 None:intergenic 30.0%
TATAGTTGATCTCATGTTTG+TGG - chr1_1:712605-712624 Msa0000060:intron 30.0%
TCATGTTTGTGGCTTAAAAA+TGG - chr1_1:712616-712635 Msa0000060:intron 30.0%
TTGTGGCTTAAAAATGGTAA+AGG - chr1_1:712622-712641 Msa0000060:intron 30.0%
AAGAAGAAATGAAAGAAAGG+AGG - chr1_1:712730-712749 Msa0000060:intron 30.0%
CTGTACTTAACTATCCATTT+AGG - chr1_1:713023-713042 Msa0000060:intron 30.0%
TTCATTTCCATTATATGTCG+AGG - chr1_1:713056-713075 Msa0000060:intron 30.0%
CTCACCATGATAAACATTAA+GGG + chr1_1:713139-713158 None:intergenic 30.0%
ACTCACCATGATAAACATTA+AGG + chr1_1:713140-713159 None:intergenic 30.0%
!!! CAAATCTGGTTTCCTTTTTT+AGG - chr1_1:713328-713347 Msa0000060:intron 30.0%
GTTTCCTTAGAGAGTAATTA+TGG - chr1_1:713443-713462 Msa0000060:intron 30.0%
GTAACCATAATTACTCTCTA+AGG + chr1_1:713450-713469 None:intergenic 30.0%
GTTATTAACCTTTCAACATC+AGG + chr1_1:713578-713597 None:intergenic 30.0%
GATAGTCAAGATCAAAGATT+TGG - chr1_1:713809-713828 Msa0000060:intron 30.0%
! ATTTTGTAAAGGACTCTAAG+GGG + chr1_1:713863-713882 None:intergenic 30.0%
! CATTTTGTAAAGGACTCTAA+GGG + chr1_1:713864-713883 None:intergenic 30.0%
! ACATTTTGTAAAGGACTCTA+AGG + chr1_1:713865-713884 None:intergenic 30.0%
AGTCCTTTACAAAATGTTCT+GGG - chr1_1:713868-713887 Msa0000060:intron 30.0%
! ATTTTGTACTATTCTCAGCA+AGG + chr1_1:713962-713981 None:intergenic 30.0%
GAATAGTACAAAATGTTTGG+TGG - chr1_1:713968-713987 Msa0000060:intron 30.0%
AGTATCACCATGCTAAATAA+TGG - chr1_1:714035-714054 Msa0000060:intron 30.0%
AAATCAGTATGTGGAAAGAT+TGG + chr1_1:714092-714111 None:intergenic 30.0%
TCATGCCAACTTAAATAATC+CGG - chr1_1:714241-714260 Msa0000060:intron 30.0%
ATGAACCGGATTATTTAAGT+TGG + chr1_1:714249-714268 None:intergenic 30.0%
!! TTCATACATAGCATTGATGA+TGG - chr1_1:714334-714353 Msa0000060:CDS 30.0%
CAAGAATGAAACCTAAAACA+GGG + chr1_1:714738-714757 None:intergenic 30.0%
!!! CTGTTTTAGGTTTCATTCTT+GGG - chr1_1:714737-714756 Msa0000060:intron 30.0%
ATCTGAACAAACAGATCATA+GGG + chr1_1:715045-715064 None:intergenic 30.0%
AATCTGAACAAACAGATCAT+AGG + chr1_1:715046-715065 None:intergenic 30.0%
AAAATACAACAGACACAAGA+AGG + chr1_1:715074-715093 None:intergenic 30.0%
!!! TATTTTTTTCCCCATCTTGT+GGG - chr1_1:715088-715107 Msa0000060:intron 30.0%
TAAAAATGTTCAAACAGCAG+CGG + chr1_1:715132-715151 None:intergenic 30.0%
! TGAACATTTTTACAGCTGTT+CGG - chr1_1:715140-715159 Msa0000060:intron 30.0%
! GCTACCAAGAAATTTAAAAC+AGG + chr1_1:715168-715187 None:intergenic 30.0%
! TTTAAATTTCTTGGTAGCCT+CGG - chr1_1:715170-715189 Msa0000060:intron 30.0%
CAAATTAACCTTGAACAACA+TGG + chr1_1:715225-715244 None:intergenic 30.0%
CATGTTGTTCAAGGTTAATT+TGG - chr1_1:715223-715242 Msa0000060:intron 30.0%
! GAGTTCCTGTATTTAGATTT+TGG - chr1_1:715332-715351 Msa0000060:intron 30.0%
ATGCACCAAAATCTAAATAC+AGG + chr1_1:715340-715359 None:intergenic 30.0%
TAAAACAAAACAATGAGAGC+GGG + chr1_1:715491-715510 None:intergenic 30.0%
ATTACTTGACTCCTGTATAA+AGG - chr1_1:715510-715529 Msa0000060:intron 30.0%
TGTATAAAGGATTGAAGCAT+GGG - chr1_1:715523-715542 Msa0000060:intron 30.0%
GTTCCTTATCTGTAGAAATA+TGG - chr1_1:715694-715713 Msa0000060:intron 30.0%
!! TAAGGGTTCTGAAGAAATAT+TGG - chr1_1:716080-716099 Msa0000060:intron 30.0%
!! AAGGGTTCTGAAGAAATATT+GGG - chr1_1:716081-716100 Msa0000060:intron 30.0%
! TGATTTGAAACTTTGTTTCC+AGG - chr1_1:716119-716138 Msa0000060:intron 30.0%
! AATGATACTTCATCAAGTTG+TGG - chr1_1:716179-716198 Msa0000060:intron 30.0%
! TGGTTTAAAACTTAGCTTCT+AGG - chr1_1:716199-716218 Msa0000060:intron 30.0%
ATAATGTCTCTGATTGTTGT+AGG - chr1_1:716249-716268 Msa0000060:intron 30.0%
TAATGTCTCTGATTGTTGTA+GGG - chr1_1:716250-716269 Msa0000060:intron 30.0%
CTTACTGGTAAGTTGTATTA+AGG - chr1_1:716497-716516 Msa0000060:intron 30.0%
! CTGATTTACTGTATTGACAA+AGG + chr1_1:716593-716612 None:intergenic 30.0%
CTTTGTCAATACAGTAAATC+AGG - chr1_1:716591-716610 Msa0000060:intron 30.0%
ATAAACTTGTATGTCGTATG+AGG + chr1_1:716645-716664 None:intergenic 30.0%
TATCACATCCAAGAATTATG+TGG + chr1_1:716877-716896 None:intergenic 30.0%
TGGATGTGATATTCTCTAAA+TGG - chr1_1:716886-716905 Msa0000060:intron 30.0%
! TATTCTCTAAATGGTGTTGA+AGG - chr1_1:716895-716914 Msa0000060:intron 30.0%
AAGATTAGTGGAGACTTAAA+AGG - chr1_1:717177-717196 Msa0000060:intron 30.0%
!! TTTCCCTTTGCTATTGAAAT+AGG - chr1_1:717239-717258 Msa0000060:intron 30.0%
!! TTCCCTTTGCTATTGAAATA+GGG - chr1_1:717240-717259 Msa0000060:intron 30.0%
ATCCCTATTTCAATAGCAAA+GGG + chr1_1:717245-717264 None:intergenic 30.0%
!! ATAGGGATCATTTTAATAGG+AGG - chr1_1:717257-717276 Msa0000060:intron 30.0%
CAACTAAAACTGGAAAATAG+AGG + chr1_1:717520-717539 None:intergenic 30.0%
!! AAAAAGGCATCAACTAAAAC+TGG + chr1_1:717530-717549 None:intergenic 30.0%
AATATACAGTAGGCGAAAAA+AGG + chr1_1:717546-717565 None:intergenic 30.0%
ATATTCATCAGTCAACTAGT+TGG - chr1_1:717604-717623 Msa0000060:intron 30.0%
! AAAGATGTTTTGCTTGATGA+TGG - chr1_1:717697-717716 Msa0000060:intron 30.0%
! AGGAACATCTTTTCATTTTC+AGG - chr1_1:717907-717926 Msa0000060:intron 30.0%
ATCATGAAGTTTAGGTACTA+TGG + chr1_1:717968-717987 None:intergenic 30.0%
ATTTGGCAATCATGAAGTTT+AGG + chr1_1:717976-717995 None:intergenic 30.0%
TCAGAGATTGCTAGAAAATT+TGG + chr1_1:717993-718012 None:intergenic 30.0%
GAAAGTCGTTTATGTAAACT+TGG - chr1_1:718062-718081 Msa0000060:CDS 30.0%
! AACATAGCAAATATTTTCGC+TGG - chr1_1:718143-718162 Msa0000060:CDS 30.0%
TAAGAGAATATTAGAGTAGC+AGG + chr1_1:718289-718308 None:intergenic 30.0%
! GGAAAAAAAACACTGGTTAA+AGG + chr1_1:718368-718387 None:intergenic 30.0%
AAAGTGTGGAAAAAAAACAC+TGG + chr1_1:718375-718394 None:intergenic 30.0%
TGTCAAATATTGGTAAAGTG+TGG + chr1_1:718389-718408 None:intergenic 30.0%
TGAATTATGGTTCCTTCAAT+AGG + chr1_1:718482-718501 None:intergenic 30.0%
CTAGCATATCACTTGAATTA+TGG + chr1_1:718495-718514 None:intergenic 30.0%
ACATCATGGCATAAACTAAA+TGG + chr1_1:718655-718674 None:intergenic 30.0%
! TACGGTTTATCTTTTATCCA+CGG - chr1_1:718736-718755 Msa0000060:CDS 30.0%
ATATATTAGAACGGCAAAAG+AGG + chr1_1:718881-718900 None:intergenic 30.0%
! CTTTTGCCGTTCTAATATAT+CGG - chr1_1:718881-718900 Msa0000060:intron 30.0%
TTGAATTCTGACTCACTATA+AGG + chr1_1:718951-718970 None:intergenic 30.0%
TCAATACTCAAGTAAAGAAG+TGG + chr1_1:719088-719107 None:intergenic 30.0%
!!! TGAGTATTGAAGCAATTTTC+AGG - chr1_1:719098-719117 Msa0000060:intron 30.0%
TTTCCTGATATGAAATGATC+GGG - chr1_1:719203-719222 Msa0000060:intron 30.0%
!! CTTTGATTTGCAAATGTAGT+AGG - chr1_1:719360-719379 Msa0000060:intron 30.0%
TTCTTATAATAAGGACCGAA+TGG + chr1_1:719421-719440 None:intergenic 30.0%
!! TTTCTTGGTCTTGATGAATT+AGG - chr1_1:719572-719591 Msa0000060:intron 30.0%
!! TTCTTGGTCTTGATGAATTA+GGG - chr1_1:719573-719592 Msa0000060:intron 30.0%
!!! GGGTTTTGTTTCTTGTAATA+AGG - chr1_1:719593-719612 Msa0000060:intron 30.0%
GAAATTACCATATTCCCTTT+AGG - chr1_1:719671-719690 Msa0000060:CDS 30.0%
AGTAGATGCAACTGAAATTA+AGG + chr1_1:719749-719768 None:intergenic 30.0%
ACAGATTTCTTACGAGAATT+CGG - chr1_1:719777-719796 Msa0000060:intron 30.0%
CACAAAGAACAGTAATAAGA+AGG + chr1_1:719843-719862 None:intergenic 30.0%
TAATAACATGCTCATACAGT+TGG - chr1_1:720319-720338 Msa0000060:intron 30.0%
CAACTTCAAATATTCACTCA+CGG - chr1_1:720440-720459 Msa0000060:CDS 30.0%
! TGATAAATAAGAGGTTGATC+AGG + chr1_1:720476-720495 None:intergenic 30.0%
TCACAAGGATGATAAATAAG+AGG + chr1_1:720485-720504 None:intergenic 30.0%
! TTTGTGTATTTTCTCATGAC+TGG - chr1_1:720599-720618 Msa0000060:intron 30.0%
! GGGATTGATAACTCTTATTA+TGG + chr1_1:720736-720755 None:intergenic 30.0%
! TATCCCACTATAGCATTTTT+AGG + chr1_1:720782-720801 None:intergenic 30.0%
AGATTAGATCACAAAGATCA+AGG - chr1_1:720877-720896 Msa0000060:intron 30.0%
! AATAAAATAGGGGGTATAGA+AGG - chr1_1:721020-721039 Msa0000060:intron 30.0%
TGTTTCAAGATTAAGATGCA+AGG + chr1_1:721329-721348 None:intergenic 30.0%
TTGACGATAAGCATTCAAAA+TGG - chr1_1:721517-721536 Msa0000060:intron 30.0%
! AAGACAAAAGCTTTTGTTGA+TGG - chr1_1:721612-721631 Msa0000060:intron 30.0%
GATTAATTATCTATGCGATG+AGG - chr1_1:721701-721720 Msa0000060:intron 30.0%
TCAAAGACTTACAATGAATC+GGG + chr1_1:721828-721847 None:intergenic 30.0%
GTCAAAGACTTACAATGAAT+CGG + chr1_1:721829-721848 None:intergenic 30.0%
! ATTTGGGAGCATATACAAAA+GGG + chr1_1:721908-721927 None:intergenic 30.0%
! TATTTGGGAGCATATACAAA+AGG + chr1_1:721909-721928 None:intergenic 30.0%
GGTTTGTAGATTAGAAATTG+TGG - chr1_1:721936-721955 Msa0000060:five_prime_UTR 30.0%
TCCTAAAGAATGAGAGAAAA+GGG + chr1_1:722016-722035 None:intergenic 30.0%
AGTGTAATCCAAAACACTTG+GGG + chr1_1:710083-710102 None:intergenic 35.0%
GAGTGTAATCCAAAACACTT+GGG + chr1_1:710084-710103 None:intergenic 35.0%
AGAGTGTAATCCAAAACACT+TGG + chr1_1:710085-710104 None:intergenic 35.0%
TTGATTCTCATAGAACCATG+TGG - chr1_1:710257-710276 Msa0000060:three_prime_UTR 35.0%
! GTTTTTCATTGGATCAACTC+AGG - chr1_1:710305-710324 Msa0000060:CDS 35.0%
TATTATCGTTGTTGACGTGT+CGG - chr1_1:710672-710691 Msa0000060:intron 35.0%
! CGGATTAGAGTCAATATGTA+AGG + chr1_1:710754-710773 None:intergenic 35.0%
TGACAAGTTTGATACCTACA+AGG - chr1_1:710925-710944 Msa0000060:CDS 35.0%
CCCTTATTAATTGCAGTTAG+TGG + chr1_1:711173-711192 None:intergenic 35.0%
!!! GACTATTATTTTGAGACGGA+GGG - chr1_1:711276-711295 Msa0000060:intron 35.0%
AAGGAGAATCCCCTAATTAA+GGG + chr1_1:711360-711379 None:intergenic 35.0%
!!! GTGGTAGGATTTTGTTATTG+AGG - chr1_1:711787-711806 Msa0000060:intron 35.0%
AATCTCACTCGAAAAAGGTT+GGG + chr1_1:711859-711878 None:intergenic 35.0%
TTTCATGGAAAAGCAAGTTG+TGG - chr1_1:711951-711970 Msa0000060:intron 35.0%
TTCATGGAAAAGCAAGTTGT+GGG - chr1_1:711952-711971 Msa0000060:intron 35.0%
ATATAGCATGTTCACTCTGT+AGG + chr1_1:712062-712081 None:intergenic 35.0%
CATCAACATTGTTACATCTG+GGG + chr1_1:712137-712156 None:intergenic 35.0%
CCATCAACATTGTTACATCT+GGG + chr1_1:712138-712157 None:intergenic 35.0%
CCAGATGTAACAATGTTGAT+GGG - chr1_1:712136-712155 Msa0000060:intron 35.0%
ATCAACTTCTGTACACTAGT+CGG + chr1_1:712307-712326 None:intergenic 35.0%
ATCATTGAAGAGCAATTGGT+GGG - chr1_1:712401-712420 Msa0000060:intron 35.0%
TTCTTCCTAATCCTAACACT+TGG - chr1_1:712563-712582 Msa0000060:intron 35.0%
TATAACCAAGTCCAAGTGTT+AGG + chr1_1:712577-712596 None:intergenic 35.0%
GCTTAAAAATGGTAAAGGAG+AGG - chr1_1:712627-712646 Msa0000060:intron 35.0%
AATTGTTAGTCCTGTAATCC+AGG - chr1_1:712847-712866 Msa0000060:intron 35.0%
TATGGGCATCTCAAAAACAA+AGG + chr1_1:712995-713014 None:intergenic 35.0%
TGAAACTACTTCGTCCTAAA+TGG + chr1_1:713040-713059 None:intergenic 35.0%
GTGACCCTTAATGTTTATCA+TGG - chr1_1:713132-713151 Msa0000060:CDS 35.0%
TTTGAGAAGTAATCTGTGTG+AGG + chr1_1:713312-713331 None:intergenic 35.0%
CACAGATTACTTCTCAAATC+TGG - chr1_1:713314-713333 Msa0000060:intron 35.0%
CATACACTGCTTCCTAAAAA+AGG + chr1_1:713343-713362 None:intergenic 35.0%
!!! CTTTTTTAGGAAGCAGTGTA+TGG - chr1_1:713341-713360 Msa0000060:intron 35.0%
TAACGGTAGAGTTTGAATCT+GGG + chr1_1:713490-713509 None:intergenic 35.0%
TTCATCTACAGCAGTAGTAA+CGG + chr1_1:713507-713526 None:intergenic 35.0%
TACTGCTGTAGATGAAATTG+AGG - chr1_1:713511-713530 Msa0000060:intron 35.0%
TTTAGTGATGTAATCTCTGC+TGG - chr1_1:713548-713567 Msa0000060:intron 35.0%
GAGTCCTTTACAAAATGTTC+TGG - chr1_1:713867-713886 Msa0000060:intron 35.0%
GTCCTTTACAAAATGTTCTG+GGG - chr1_1:713869-713888 Msa0000060:intron 35.0%
TCCTTTACAAAATGTTCTGG+GGG - chr1_1:713870-713889 Msa0000060:intron 35.0%
TGCTTTCAGATGTAAAACCA+TGG + chr1_1:713920-713939 None:intergenic 35.0%
! GGTTTTACATCTGAAAGCAA+CGG - chr1_1:713921-713940 Msa0000060:intron 35.0%
! GTTTTACATCTGAAAGCAAC+GGG - chr1_1:713922-713941 Msa0000060:intron 35.0%
TTTAGCATGGTGATACTTTG+TGG + chr1_1:714032-714051 None:intergenic 35.0%
ACTGCTACCATTATTTAGCA+TGG + chr1_1:714045-714064 None:intergenic 35.0%
TAATGGTAGCAGTTCAAATG+TGG - chr1_1:714052-714071 Msa0000060:intron 35.0%
!! TCTTCATATTTCTGCGCTTT+TGG - chr1_1:714194-714213 Msa0000060:intron 35.0%
! GACTGGTAAAAAGTATGAAC+CGG + chr1_1:714263-714282 None:intergenic 35.0%
!! TTTTGGCTGTGTTTGTTTCA+AGG - chr1_1:714367-714386 Msa0000060:intron 35.0%
ATCCTGGGAATATTATTCCT+AGG - chr1_1:714402-714421 Msa0000060:intron 35.0%
TTCCTAGGAATAATATTCCC+AGG + chr1_1:714407-714426 None:intergenic 35.0%
ATAAAGGGGTTAAAATAGCG+TGG - chr1_1:714499-714518 Msa0000060:intron 35.0%
TAAAGGGGTTAAAATAGCGT+GGG - chr1_1:714500-714519 Msa0000060:intron 35.0%
! GGAAGTTGGGCTTTAATTTA+AGG - chr1_1:714527-714546 Msa0000060:intron 35.0%
TCTATCCTTACTCTTATGGA+CGG - chr1_1:714557-714576 Msa0000060:intron 35.0%
TAATACCGTCCATAAGAGTA+AGG + chr1_1:714565-714584 None:intergenic 35.0%
ACGGTATTAATACCCTTTGT+AGG - chr1_1:714576-714595 Msa0000060:intron 35.0%
TTAATACCCTTTGTAGGTAG+TGG - chr1_1:714582-714601 Msa0000060:intron 35.0%
AGATTGACCACTAGTTGTTA+AGG - chr1_1:714632-714651 Msa0000060:CDS 35.0%
CCAAGAATGAAACCTAAAAC+AGG + chr1_1:714739-714758 None:intergenic 35.0%
!!! CCTGTTTTAGGTTTCATTCT+TGG - chr1_1:714736-714755 Msa0000060:intron 35.0%
!!! GTATTTTTTTCCCCATCTTG+TGG - chr1_1:715087-715106 Msa0000060:intron 35.0%
!! GGACCCTGTTTTAAATTTCT+TGG - chr1_1:715161-715180 Msa0000060:intron 35.0%
! TTAAATTTCTTGGTAGCCTC+GGG - chr1_1:715171-715190 Msa0000060:intron 35.0%
TAATTTGGTACCCAGTTTGA+TGG - chr1_1:715238-715257 Msa0000060:intron 35.0%
!! TAGATTTTGGTGCATATAGC+TGG - chr1_1:715345-715364 Msa0000060:intron 35.0%
! TAATGCTATGAGGTGTTTAG+GGG + chr1_1:715393-715412 None:intergenic 35.0%
! GTAATGCTATGAGGTGTTTA+GGG + chr1_1:715394-715413 None:intergenic 35.0%
CATGCTTCAATCCTTTATAC+AGG + chr1_1:715524-715543 None:intergenic 35.0%
CTGTATAAAGGATTGAAGCA+TGG - chr1_1:715522-715541 Msa0000060:intron 35.0%
GACAGACAATGAAGGATATT+TGG + chr1_1:715640-715659 None:intergenic 35.0%
!!! CCAACACTTTTAACTTATCC+AGG + chr1_1:715675-715694 None:intergenic 35.0%
! CCTGGATAAGTTAAAAGTGT+TGG - chr1_1:715672-715691 Msa0000060:CDS 35.0%
GTTGGATAAAAAGTGAGACT+GGG + chr1_1:715825-715844 None:intergenic 35.0%
! GTTTTGCTCGAATATGTAAC+TGG - chr1_1:716275-716294 Msa0000060:intron 35.0%
GGAAACAGAAATAAGTGCAA+TGG + chr1_1:716392-716411 None:intergenic 35.0%
!!! TTTTTTTGCTGTTTGCGTTG+TGG + chr1_1:716474-716493 None:intergenic 35.0%
ACAGCAAAAAAAGCTCTTAC+TGG - chr1_1:716482-716501 Msa0000060:intron 35.0%
!! ATGAGGATTTGTTGTATCGA+AGG + chr1_1:716628-716647 None:intergenic 35.0%
TAAAATATAGAACGCGGGAT+TGG + chr1_1:716685-716704 None:intergenic 35.0%
! TTTGCTATCCTTGTTAAGTG+TGG - chr1_1:716708-716727 Msa0000060:intron 35.0%
GTTACAGTAATAATGGCACT+TGG + chr1_1:716785-716804 None:intergenic 35.0%
CTGTAACCTGTAAATTGGAA+AGG - chr1_1:716798-716817 Msa0000060:intron 35.0%
! AAAAGGGGAACATTTGTTGA+TGG - chr1_1:716984-717003 Msa0000060:intron 35.0%
! TCTCAATTAGGTTTTTGCCA+GGG - chr1_1:717047-717066 Msa0000060:intron 35.0%
GGTATTCTGTTCTCTTTGTA+TGG - chr1_1:717138-717157 Msa0000060:intron 35.0%
! GAGACTTAAAAGGTTTGCTT+AGG - chr1_1:717187-717206 Msa0000060:intron 35.0%
! CTTAAAAGGTTTGCTTAGGA+AGG - chr1_1:717191-717210 Msa0000060:intron 35.0%
! TTGCTTAGGAAGGTTATTTC+TGG - chr1_1:717201-717220 Msa0000060:intron 35.0%
!! TTAGGAAGGTTATTTCTGGA+TGG - chr1_1:717205-717224 Msa0000060:intron 35.0%
GATCCCTATTTCAATAGCAA+AGG + chr1_1:717246-717265 None:intergenic 35.0%
!! GGATCATTTTAATAGGAGGA+GGG - chr1_1:717261-717280 Msa0000060:intron 35.0%
!! GATCATTTTAATAGGAGGAG+GGG - chr1_1:717262-717281 Msa0000060:intron 35.0%
TTTATTCTAGCGAAGTGACT+TGG - chr1_1:717299-717318 Msa0000060:intron 35.0%
AACTAAGCTTGCATTCAAGA+AGG + chr1_1:717579-717598 None:intergenic 35.0%
!!! ATTTTTTCAGCCTTCAAACG+TGG - chr1_1:717766-717785 Msa0000060:intron 35.0%
TCATGCATGTTTACAACTCT+AGG - chr1_1:718014-718033 Msa0000060:intron 35.0%
! TGCGTAAAATTGCGAGTTTT+AGG - chr1_1:718102-718121 Msa0000060:CDS 35.0%
! TTAACATGGTTTGTGCACTA+AGG + chr1_1:718238-718257 None:intergenic 35.0%
AACAATACTCTTCACCACTT+CGG + chr1_1:718412-718431 None:intergenic 35.0%
!! TGAAGAGTATTGTTGGTCAA+AGG - chr1_1:718418-718437 Msa0000060:intron 35.0%
! CTATAGAATCTGGAACATCA+TGG + chr1_1:718669-718688 None:intergenic 35.0%
CATGATGTTCCAGATTCTAT+AGG - chr1_1:718667-718686 Msa0000060:intron 35.0%
!!! GGTGACATTGCATTTTTTGA+TGG - chr1_1:718757-718776 Msa0000060:CDS 35.0%
TCTCTGCCGATATATTAGAA+CGG + chr1_1:718890-718909 None:intergenic 35.0%
TTCTTACTTTCAACGATTCC+AGG + chr1_1:718983-719002 None:intergenic 35.0%
TAAACAGTATGCGAGTATAG+GGG + chr1_1:719051-719070 None:intergenic 35.0%
GTAAACAGTATGCGAGTATA+GGG + chr1_1:719052-719071 None:intergenic 35.0%
TGTAAACAGTATGCGAGTAT+AGG + chr1_1:719053-719072 None:intergenic 35.0%
ATACTGTTTACACATGTAGG+AGG - chr1_1:719061-719080 Msa0000060:intron 35.0%
!! GTATTGAAGCAATTTTCAGG+CGG - chr1_1:719101-719120 Msa0000060:intron 35.0%
!! TATTGAAGCAATTTTCAGGC+GGG - chr1_1:719102-719121 Msa0000060:intron 35.0%
!! CGTCAACCTTCTGAAATTTA+GGG + chr1_1:719318-719337 None:intergenic 35.0%
!! ACGTCAACCTTCTGAAATTT+AGG + chr1_1:719319-719338 None:intergenic 35.0%
TAAATTTCAGAAGGTTGACG+TGG - chr1_1:719318-719337 Msa0000060:intron 35.0%
ATCCCATGAAATACTCCATT+CGG - chr1_1:719403-719422 Msa0000060:intron 35.0%
!! AATTGATATAGGGGCATTCA+TGG - chr1_1:719497-719516 Msa0000060:intron 35.0%
! TTTCTTGTAATAAGGAGCGT+AGG - chr1_1:719601-719620 Msa0000060:intron 35.0%
! TTCTTGTAATAAGGAGCGTA+GGG - chr1_1:719602-719621 Msa0000060:intron 35.0%
GACTATACCTAAAGGGAATA+TGG + chr1_1:719681-719700 None:intergenic 35.0%
GCTCTTGAAAAGGAAGTTAA+AGG - chr1_1:719805-719824 Msa0000060:intron 35.0%
AGAACAGTAATAAGAAGGTC+AGG + chr1_1:719838-719857 None:intergenic 35.0%
TTACTGTTCTTTGTGATGAG+TGG - chr1_1:719848-719867 Msa0000060:CDS 35.0%
! TAATTTTCTACCTCCAGCAA+TGG - chr1_1:719960-719979 Msa0000060:intron 35.0%
TTTAGCTGGTTGTTATATCC+AGG - chr1_1:720096-720115 Msa0000060:CDS 35.0%
TTTAGCTGGTTGTTATATCC+AGG - chr1_1:720096-720115 Msa0000060:CDS 35.0%
TTTCTTATTATTCTCGAGCC+TGG + chr1_1:720155-720174 None:intergenic 35.0%
CAATCTATGACGAATCAGAA+TGG + chr1_1:720353-720372 None:intergenic 35.0%
ACAAATACCTACAAGAGAGA+GGG + chr1_1:720410-720429 None:intergenic 35.0%
TACAAATACCTACAAGAGAG+AGG + chr1_1:720411-720430 None:intergenic 35.0%
! CGTGAGTGAATATTTGAAGT+TGG + chr1_1:720442-720461 None:intergenic 35.0%
ACAGCCTAAAAATGCTATAG+TGG - chr1_1:720775-720794 Msa0000060:intron 35.0%
CAGCCTAAAAATGCTATAGT+GGG - chr1_1:720776-720795 Msa0000060:intron 35.0%
GTGGTAAATAAGAGACAGAT+AGG + chr1_1:721113-721132 None:intergenic 35.0%
TTGTAGAATTGCTTTCGAGA+GGG - chr1_1:721152-721171 Msa0000060:intron 35.0%
AGACTGCTAGAAAGCAAAAA+TGG + chr1_1:721188-721207 None:intergenic 35.0%
ATTCAAAATGGTTACACCTG+CGG - chr1_1:721529-721548 Msa0000060:intron 35.0%
!! AAGCTTTTGTTGATGGAAGA+TGG - chr1_1:721619-721638 Msa0000060:intron 35.0%
! TGTTGATGGAAGATGGATAT+TGG - chr1_1:721626-721645 Msa0000060:intron 35.0%
AATAATAGGCTGTTTACTCC+AGG - chr1_1:721858-721877 Msa0000060:five_prime_UTR 35.0%
ATAATAGGCTGTTTACTCCA+GGG - chr1_1:721859-721878 Msa0000060:five_prime_UTR 35.0%
! TCCCTTTTCTCTCATTCTTT+AGG - chr1_1:722012-722031 Msa0000060:five_prime_UTR 35.0%
CTCCTAAAGAATGAGAGAAA+AGG + chr1_1:722017-722036 None:intergenic 35.0%
CAAGGAGGAAAAAAACTCTA+TGG + chr1_1:722124-722143 None:intergenic 35.0%
AAATTACACCAGTCTGAACA+AGG + chr1_1:722142-722161 None:intergenic 35.0%
AGAGGTTGTGAAGTTGAAGA+TGG + chr1_1:710023-710042 None:intergenic 40.0%
TGATTACTCAGGAGCTCATA+TGG - chr1_1:710530-710549 Msa0000060:CDS 40.0%
TGGTAGACACTTCTGATTGA+AGG - chr1_1:710564-710583 Msa0000060:CDS 40.0%
TGTCTGACAGTAACATGTGT+CGG + chr1_1:710602-710621 None:intergenic 40.0%
!! TTAGTTTGCTCGTGAAAGAC+CGG + chr1_1:710774-710793 None:intergenic 40.0%
AAACGGATGGAGTATATCCA+AGG + chr1_1:711020-711039 None:intergenic 40.0%
!!! CGACTATTATTTTGAGACGG+AGG - chr1_1:711275-711294 Msa0000060:intron 40.0%
CAAGGAGAATCCCCTAATTA+AGG + chr1_1:711361-711380 None:intergenic 40.0%
AAAACTCATACACACAGCTG+CGG + chr1_1:711460-711479 None:intergenic 40.0%
! CAGCTGTGTGTATGAGTTTT+AGG - chr1_1:711460-711479 Msa0000060:intron 40.0%
!!! CTGTGTGTATGAGTTTTAGG+TGG - chr1_1:711463-711482 Msa0000060:intron 40.0%
TTCTGTGTCTGTAGATGAAG+TGG + chr1_1:711495-711514 None:intergenic 40.0%
GAATCTCACTCGAAAAAGGT+TGG + chr1_1:711860-711879 None:intergenic 40.0%
AACGGAATCTCACTCGAAAA+AGG + chr1_1:711864-711883 None:intergenic 40.0%
ACCATGGAGCATAAGCATAA+CGG + chr1_1:711882-711901 None:intergenic 40.0%
TGAAAAATCTGCCACAAGCT+AGG + chr1_1:711936-711955 None:intergenic 40.0%
! AGCTTGTGGCAGATTTTTCA+TGG - chr1_1:711936-711955 Msa0000060:intron 40.0%
TCATGGAAAAGCAAGTTGTG+GGG - chr1_1:711953-711972 Msa0000060:intron 40.0%
ACAGTTTGTAGCAACTGAAG+TGG + chr1_1:712021-712040 None:intergenic 40.0%
! CATGTTCACTCTGTAGGTTT+TGG + chr1_1:712056-712075 None:intergenic 40.0%
GGTAGGAAATAACGTAACTG+CGG + chr1_1:712116-712135 None:intergenic 40.0%
! AACATTGTTACATCTGGGGT+AGG + chr1_1:712133-712152 None:intergenic 40.0%
CCCAGATGTAACAATGTTGA+TGG - chr1_1:712135-712154 Msa0000060:intron 40.0%
CCCATCAACATTGTTACATC+TGG + chr1_1:712139-712158 None:intergenic 40.0%
ATGACAACAGCTCTTCATTG+CGG + chr1_1:712249-712268 None:intergenic 40.0%
GGTCATCATTGAAGAGCAAT+TGG - chr1_1:712397-712416 Msa0000060:intron 40.0%
CATCATTGAAGAGCAATTGG+TGG - chr1_1:712400-712419 Msa0000060:intron 40.0%
CAAGTCCAAGTGTTAGGATT+AGG + chr1_1:712571-712590 None:intergenic 40.0%
CTAATCCTAACACTTGGACT+TGG - chr1_1:712569-712588 Msa0000060:intron 40.0%
ATGGTAAAGGAGAGGATACT+TGG - chr1_1:712635-712654 Msa0000060:intron 40.0%
! TCTGATGTTTTGTGCAGTTG+AGG - chr1_1:712811-712830 Msa0000060:intron 40.0%
GGTTACTGATACAGAAATCC+AGG - chr1_1:713464-713483 Msa0000060:intron 40.0%
GTAACGGTAGAGTTTGAATC+TGG + chr1_1:713491-713510 None:intergenic 40.0%
CTGGAATTCCTGATGTTGAA+AGG - chr1_1:713567-713586 Msa0000060:intron 40.0%
ATTATCAGCCACTATCCTCA+GGG + chr1_1:713645-713664 None:intergenic 40.0%
TGTTTAGTAGCATGTTGACC+AGG - chr1_1:713734-713753 Msa0000060:intron 40.0%
! ACTTGCTTTGTTGCATCTTG+AGG - chr1_1:713787-713806 Msa0000060:intron 40.0%
! ACCCCCAGAACATTTTGTAA+AGG + chr1_1:713874-713893 None:intergenic 40.0%
AATGGCTATATACCTGACCA+TGG - chr1_1:713900-713919 Msa0000060:intron 40.0%
TCAGATGTAAAACCATGGTC+AGG + chr1_1:713915-713934 None:intergenic 40.0%
TCTGAAGAACTAGATGAGCA+TGG + chr1_1:714002-714021 None:intergenic 40.0%
CTCCTCTATCCTTACTCTTA+TGG - chr1_1:714553-714572 Msa0000060:intron 40.0%
GTCCATAAGAGTAAGGATAG+AGG + chr1_1:714558-714577 None:intergenic 40.0%
AGTTCAAAATCCCTAGCTTC+TGG - chr1_1:714690-714709 Msa0000060:CDS 40.0%
GTTCAAACAAGGTGTACAGT+TGG + chr1_1:714766-714785 None:intergenic 40.0%
! GTACACCTTGTTTGAACTAG+AGG - chr1_1:714769-714788 Msa0000060:intron 40.0%
! GTTGTGAATTAATAGCGGGA+AGG + chr1_1:714896-714915 None:intergenic 40.0%
CCAAACAAACCAAAATGAGC+CGG + chr1_1:714941-714960 None:intergenic 40.0%
! TCTGAAACATACCAGAACAG+CGG + chr1_1:714982-715001 None:intergenic 40.0%
!!! GAGGTTTTTCGTTGCTGTTT+TGG - chr1_1:715000-715019 Msa0000060:intron 40.0%
ATCATAGGGAACAATCACAG+CGG + chr1_1:715031-715050 None:intergenic 40.0%
GTTACCATAATGAGTCAGAG+TGG + chr1_1:715288-715307 None:intergenic 40.0%
ACAGGAACTCAGAATGACAT+AGG + chr1_1:715322-715341 None:intergenic 40.0%
! GGTAATGCTATGAGGTGTTT+AGG + chr1_1:715395-715414 None:intergenic 40.0%
CATTGCAAGGTAATGCTATG+AGG + chr1_1:715403-715422 None:intergenic 40.0%
CTCATAGCATTACCTTGCAA+TGG - chr1_1:715401-715420 Msa0000060:intron 40.0%
ATAAACACAGTGGGTGAATG+AGG + chr1_1:715598-715617 None:intergenic 40.0%
GGTTGGATAAAAAGTGAGAC+TGG + chr1_1:715826-715845 None:intergenic 40.0%
! TCTCTCTCCCTTTATTTGGT+TGG + chr1_1:715843-715862 None:intergenic 40.0%
GTACTCTCTCTCCCTTTATT+TGG + chr1_1:715847-715866 None:intergenic 40.0%
ACACATCCAATCAAAGCCTT+AGG - chr1_1:716035-716054 Msa0000060:intron 40.0%
CACATCCAATCAAAGCCTTA+GGG - chr1_1:716036-716055 Msa0000060:intron 40.0%
! GAAACTTTGTTTCCAGGACA+CGG - chr1_1:716125-716144 Msa0000060:intron 40.0%
TTGCTCGAATATGTAACTGG+CGG - chr1_1:716278-716297 Msa0000060:intron 40.0%
AGAACTTGATGAGTCAATGC+TGG - chr1_1:716431-716450 Msa0000060:intron 40.0%
TTGATGAGTCAATGCTGGAT+GGG - chr1_1:716436-716455 Msa0000060:intron 40.0%
AAGAAACGCCACACTTAACA+AGG + chr1_1:716719-716738 None:intergenic 40.0%
TAATGGCACTTGGATGAATC+AGG + chr1_1:716775-716794 None:intergenic 40.0%
! TCTCTAAATGGTGTTGAAGG+TGG - chr1_1:716898-716917 Msa0000060:intron 40.0%
TCTTGCGGACAGAACAAAAA+AGG - chr1_1:716967-716986 Msa0000060:intron 40.0%
CTTGCGGACAGAACAAAAAA+GGG - chr1_1:716968-716987 Msa0000060:intron 40.0%
TTGCGGACAGAACAAAAAAG+GGG - chr1_1:716969-716988 Msa0000060:intron 40.0%
! GTCTCAATTAGGTTTTTGCC+AGG - chr1_1:717046-717065 Msa0000060:intron 40.0%
! CTCAATTAGGTTTTTGCCAG+GGG - chr1_1:717048-717067 Msa0000060:intron 40.0%
!! GGGATCATTTTAATAGGAGG+AGG - chr1_1:717260-717279 Msa0000060:intron 40.0%
GAAAGTAGCTCAACAAGAGA+TGG - chr1_1:717443-717462 Msa0000060:intron 40.0%
ACAAGAGATGGTATTGCATG+TGG - chr1_1:717455-717474 Msa0000060:intron 40.0%
CAAGAGATGGTATTGCATGT+GGG - chr1_1:717456-717475 Msa0000060:intron 40.0%
CATCAGTCAACTAGTTGGTT+CGG - chr1_1:717609-717628 Msa0000060:intron 40.0%
TTCCTACCCATAAGCAGTTA+GGG + chr1_1:717892-717911 None:intergenic 40.0%
TGGACATGCTGAAATGACAT+TGG - chr1_1:718163-718182 Msa0000060:CDS 40.0%
!! TGACATTGGCTCAGTGTATT+TGG - chr1_1:718177-718196 Msa0000060:CDS 40.0%
ACCAATATTTGACACCGAAG+TGG - chr1_1:718395-718414 Msa0000060:intron 40.0%
!! ACCACTTCGGTGTCAAATAT+TGG + chr1_1:718399-718418 None:intergenic 40.0%
!! GAAGTGGTGAAGAGTATTGT+TGG - chr1_1:718411-718430 Msa0000060:intron 40.0%
! GCTAGACTGATAATGCTACT+TGG - chr1_1:718510-718529 Msa0000060:CDS 40.0%
CTACTTGGACCAGAATATTG+TGG - chr1_1:718525-718544 Msa0000060:CDS 40.0%
ATGTGAACAAATTACCTGCC+TGG - chr1_1:718615-718634 Msa0000060:CDS 40.0%
CAAAAAATGCAATGTCACCG+TGG + chr1_1:718756-718775 None:intergenic 40.0%
ATATATCGGCAGAGACACTA+TGG - chr1_1:718895-718914 Msa0000060:intron 40.0%
TATATCGGCAGAGACACTAT+GGG - chr1_1:718896-718915 Msa0000060:intron 40.0%
ACTCACTATAAGGAAGCAAC+TGG + chr1_1:718941-718960 None:intergenic 40.0%
TTACTTTCAACGATTCCAGG+CGG + chr1_1:718980-718999 None:intergenic 40.0%
CGCATACTGTTTACACATGT+AGG - chr1_1:719058-719077 Msa0000060:CDS 40.0%
!! ATTGAAGCAATTTTCAGGCG+GGG - chr1_1:719103-719122 Msa0000060:intron 40.0%
AGTCCCGATCATTTCATATC+AGG + chr1_1:719209-719228 None:intergenic 40.0%
GATATGAAATGATCGGGACT+TGG - chr1_1:719209-719228 Msa0000060:intron 40.0%
GACATTCAACTACCCAATGT+GGG + chr1_1:719254-719273 None:intergenic 40.0%
AGACATTCAACTACCCAATG+TGG + chr1_1:719255-719274 None:intergenic 40.0%
! GACCGAATGGAGTATTTCAT+GGG + chr1_1:719408-719427 None:intergenic 40.0%
TCTCGTAAGAAATCTGTGAG+AGG + chr1_1:719774-719793 None:intergenic 40.0%
!!! TGCACTTTGGTTCTTTTGGA+GGG + chr1_1:719996-720015 None:intergenic 40.0%
!!! ATGCACTTTGGTTCTTTTGG+AGG + chr1_1:719997-720016 None:intergenic 40.0%
!!! AGCATGCACTTTGGTTCTTT+TGG + chr1_1:720000-720019 None:intergenic 40.0%
CAAATACCTACAAGAGAGAG+GGG + chr1_1:720409-720428 None:intergenic 40.0%
GAATTCGTACGATGATCACA+AGG + chr1_1:720500-720519 None:intergenic 40.0%
GTAATTCAGAACAGTTACCG+AGG + chr1_1:720577-720596 None:intergenic 40.0%
GAGTTATCAATCCCAGATAG+CGG - chr1_1:720742-720761 Msa0000060:intron 40.0%
TCTACTATATGCCGCTATCT+GGG + chr1_1:720756-720775 None:intergenic 40.0%
AAATGAAACCCACTTGCACA+TGG - chr1_1:720970-720989 Msa0000060:intron 40.0%
TTGATCTTCCATGTGCAAGT+GGG + chr1_1:720981-721000 None:intergenic 40.0%
ATTGATCTTCCATGTGCAAG+TGG + chr1_1:720982-721001 None:intergenic 40.0%
TGCACATGGAAGATCAATCT+TGG - chr1_1:720984-721003 Msa0000060:intron 40.0%
CTCTCGAAAGCAATTCTACA+AGG + chr1_1:721153-721172 None:intergenic 40.0%
CTTGTAGAATTGCTTTCGAG+AGG - chr1_1:721151-721170 Msa0000060:intron 40.0%
TGTAGAATTGCTTTCGAGAG+GGG - chr1_1:721153-721172 Msa0000060:intron 40.0%
ATTCATGGATTCTTTCTGCG+TGG + chr1_1:721395-721414 None:intergenic 40.0%
TTCTGTCATTCTTTAGCCCA+GGG - chr1_1:721494-721513 Msa0000060:intron 40.0%
AACTTGACAGGATCCAGAAA+AGG + chr1_1:721573-721592 None:intergenic 40.0%
CTGTCAAGTTCAATCGACAT+GGG - chr1_1:721583-721602 Msa0000060:intron 40.0%
AAGATGGATATTGGCGTTCA+GGG - chr1_1:721635-721654 Msa0000060:intron 40.0%
AAGACTTACAATGAATCGGG+AGG + chr1_1:721825-721844 None:intergenic 40.0%
TAATAGGCTGTTTACTCCAG+GGG - chr1_1:721860-721879 Msa0000060:five_prime_UTR 40.0%
ACTTAATAATTTCCCACCCC+TGG + chr1_1:721879-721898 None:intergenic 40.0%
! TTCTTTAGGAGCTCTAACGT+AGG - chr1_1:722026-722045 Msa0000060:five_prime_UTR 40.0%
! TTTTTCCTCCTTGTTCAGAC+TGG - chr1_1:722131-722150 Msa0000060:five_prime_UTR 40.0%
! ACTCGATACCCCAAGTGTTT+TGG - chr1_1:710072-710091 Msa0000060:three_prime_UTR 45.0%
! GAACCATGTGGTTTTCCTTC+TGG - chr1_1:710269-710288 Msa0000060:exon 45.0%
TCTCCAGAAGGAAAACCACA+TGG + chr1_1:710275-710294 None:intergenic 45.0%
ACGATCTTTGGATCTCCAGA+AGG + chr1_1:710287-710306 None:intergenic 45.0%
CTCATATGGCTCATACACTG+TGG - chr1_1:710544-710563 Msa0000060:CDS 45.0%
AGTAACATGTGTCGGACACT+AGG + chr1_1:710594-710613 None:intergenic 45.0%
AAGCTCTCTCTCTTCCTTGT+AGG + chr1_1:710942-710961 None:intergenic 45.0%
AAGGAAGAGAGAGAGCTTGA+GGG - chr1_1:710944-710963 Msa0000060:CDS 45.0%
TCGACATTGCCAGATGAGAT+AGG + chr1_1:711393-711412 None:intergenic 45.0%
CTGGCAATGTCGATATTGCT+AGG - chr1_1:711400-711419 Msa0000060:intron 45.0%
CAATGTCGATATTGCTAGGC+TGG - chr1_1:711404-711423 Msa0000060:intron 45.0%
AAACTCATACACACAGCTGC+GGG + chr1_1:711459-711478 None:intergenic 45.0%
!! ATCGCGGAGTTGGTAACATA+TGG - chr1_1:711821-711840 Msa0000060:intron 45.0%
CGAAAAAGGTTGGGTCATGT+TGG + chr1_1:711850-711869 None:intergenic 45.0%
TCCGTTATGCTTATGCTCCA+TGG - chr1_1:711878-711897 Msa0000060:CDS 45.0%
CATGGAAAAGCAAGTTGTGG+GGG - chr1_1:711954-711973 Msa0000060:intron 45.0%
TTAGGAAGAACGTCGTGCAA+AGG + chr1_1:712553-712572 None:intergenic 45.0%
TATTGGACTGCCTGGATTAC+AGG + chr1_1:712860-712879 None:intergenic 45.0%
TCTCACAATATTGGACTGCC+TGG + chr1_1:712868-712887 None:intergenic 45.0%
CGTATCGCCTCGACATATAA+TGG + chr1_1:713066-713085 None:intergenic 45.0%
GATACGCTTTGCCTTTCATG+AGG - chr1_1:713080-713099 Msa0000060:intron 45.0%
GATCATGCTCTCCTCATGAA+AGG + chr1_1:713094-713113 None:intergenic 45.0%
CATTATCAGCCACTATCCTC+AGG + chr1_1:713646-713665 None:intergenic 45.0%
GTTGACCAGGATATGCAAAG+TGG - chr1_1:713747-713766 Msa0000060:intron 45.0%
CAACACCACTTTGCATATCC+TGG + chr1_1:713755-713774 None:intergenic 45.0%
! GCAGTTCAAATGTGGCTTTG+AGG - chr1_1:714060-714079 Msa0000060:intron 45.0%
GGTTAAAATAGCGTGGGAGT+GGG - chr1_1:714506-714525 Msa0000060:intron 45.0%
! GACTAGCCACTACCTACAAA+GGG + chr1_1:714591-714610 None:intergenic 45.0%
! AGACTAGCCACTACCTACAA+AGG + chr1_1:714592-714611 None:intergenic 45.0%
CTAGTCTCCTATCTCACACA+TGG - chr1_1:714605-714624 Msa0000060:intron 45.0%
TCTGTAGCCATGTGTGAGAT+AGG + chr1_1:714615-714634 None:intergenic 45.0%
CAGACAGCCTTAACAACTAG+TGG + chr1_1:714642-714661 None:intergenic 45.0%
AGAGGCTAAACCAGAAGCTA+GGG + chr1_1:714703-714722 None:intergenic 45.0%
! TCTGGTTTAGCCTCTGTCAA+AGG - chr1_1:714708-714727 Msa0000060:CDS 45.0%
CTGGTTTAGCCTCTGTCAAA+GGG - chr1_1:714709-714728 Msa0000060:CDS 45.0%
! TCAAAGGGCTACCCTGTTTT+AGG - chr1_1:714724-714743 Msa0000060:intron 45.0%
! ACCTTGTTTGAACTAGAGGC+CGG - chr1_1:714773-714792 Msa0000060:intron 45.0%
! GTGAATTAATAGCGGGAAGG+TGG + chr1_1:714893-714912 None:intergenic 45.0%
! ACCTTTTCAGTTCGTTTCGC+CGG - chr1_1:714919-714938 Msa0000060:intron 45.0%
!!! CCGGCTCATTTTGGTTTGTT+TGG - chr1_1:714938-714957 Msa0000060:intron 45.0%
TTGTTTGGACCACTTCCAAG+TGG - chr1_1:714953-714972 Msa0000060:intron 45.0%
TGTTTGGACCACTTCCAAGT+GGG - chr1_1:714954-714973 Msa0000060:intron 45.0%
CTGAAACATACCAGAACAGC+GGG + chr1_1:714981-715000 None:intergenic 45.0%
GCTGTTCTGGTATGTTTCAG+AGG - chr1_1:714981-715000 Msa0000060:intron 45.0%
ACAACAGACACAAGAAGGCA+TGG + chr1_1:715069-715088 None:intergenic 45.0%
! TAGCCTCGGGTTCAATTTTC+TGG - chr1_1:715184-715203 Msa0000060:intron 45.0%
CAACCAGAAAATTGAACCCG+AGG + chr1_1:715190-715209 None:intergenic 45.0%
GAACAACATGGGAGTGAAGT+GGG + chr1_1:715213-715232 None:intergenic 45.0%
TGAACAACATGGGAGTGAAG+TGG + chr1_1:715214-715233 None:intergenic 45.0%
CTTCACTCCCATGTTGTTCA+AGG - chr1_1:715214-715233 Msa0000060:intron 45.0%
TGTTGGACTGCCATCAAACT+GGG + chr1_1:715251-715270 None:intergenic 45.0%
AGTCCAACAGGCTTCTTTGT+TGG - chr1_1:715262-715281 Msa0000060:intron 45.0%
TTGGCCACTCTGACTCATTA+TGG - chr1_1:715281-715300 Msa0000060:intron 45.0%
GCATTACCTTGCAATGGTCA+AGG - chr1_1:715407-715426 Msa0000060:intron 45.0%
TCAAGAGACAGAGATGGAAG+AGG + chr1_1:715437-715456 None:intergenic 45.0%
GATGACACGACAGACAATGA+AGG + chr1_1:715648-715667 None:intergenic 45.0%
ACTAAGTGGGGTCAACTACA+TGG + chr1_1:715751-715770 None:intergenic 45.0%
ATGTAGTTGACCCCACTTAG+TGG - chr1_1:715750-715769 Msa0000060:intron 45.0%
TGTAGTTGACCCCACTTAGT+GGG - chr1_1:715751-715770 Msa0000060:intron 45.0%
GAGAGGGATGAGAAATAGAG+TGG + chr1_1:715917-715936 None:intergenic 45.0%
GAAGATGAGACGAGAGAAAG+AGG + chr1_1:716015-716034 None:intergenic 45.0%
! AGGAACCCTAAGGCTTTGAT+TGG + chr1_1:716044-716063 None:intergenic 45.0%
AAAAGGGTGAAGGAACCCTA+AGG + chr1_1:716054-716073 None:intergenic 45.0%
TGCTCGAATATGTAACTGGC+GGG - chr1_1:716279-716298 Msa0000060:intron 45.0%
! GGGGCTGATGTACAAGTTTT+GGG - chr1_1:716299-716318 Msa0000060:intron 45.0%
!! ACCTTTAGTTTGCAGCAGAG+TGG + chr1_1:716342-716361 None:intergenic 45.0%
CTTGATGAGTCAATGCTGGA+TGG - chr1_1:716435-716454 Msa0000060:intron 45.0%
CAAAATGGCAGATGCAAGCT+AGG + chr1_1:716528-716547 None:intergenic 45.0%
!! CTAGCTTGCATCTGCCATTT+TGG - chr1_1:716526-716545 Msa0000060:intron 45.0%
! AAATGGTGTTGAAGGTGGTG+AGG - chr1_1:716903-716922 Msa0000060:intron 45.0%
TTGCTTACAACAAAAGCCCC+TGG + chr1_1:717067-717086 None:intergenic 45.0%
CTTGCTGCACAAACATGCAA+TGG + chr1_1:717379-717398 None:intergenic 45.0%
CATGTTTGTGCAGCAAGCTT+TGG - chr1_1:717382-717401 Msa0000060:intron 45.0%
! TTTGTGCAGCAAGCTTTGGT+TGG - chr1_1:717386-717405 Msa0000060:intron 45.0%
CCTGAAATCTACGTACACGA+GGG + chr1_1:717799-717818 None:intergenic 45.0%
ACCTGAAATCTACGTACACG+AGG + chr1_1:717800-717819 None:intergenic 45.0%
TGGAAGTCCCTAACTGCTTA+TGG - chr1_1:717882-717901 Msa0000060:intron 45.0%
GGAAGTCCCTAACTGCTTAT+GGG - chr1_1:717883-717902 Msa0000060:intron 45.0%
GTTCCTACCCATAAGCAGTT+AGG + chr1_1:717893-717912 None:intergenic 45.0%
TAGCAGAAGCTCGCTTAACA+TGG + chr1_1:718252-718271 None:intergenic 45.0%
AGTGATTCAGCTGTTACTGG+AGG + chr1_1:718342-718361 None:intergenic 45.0%
CACAGTGATTCAGCTGTTAC+TGG + chr1_1:718345-718364 None:intergenic 45.0%
ATGGTAAAGTTAGCGACACC+AGG + chr1_1:718636-718655 None:intergenic 45.0%
! TTGTGTCGATGTCACTGCTA+AGG + chr1_1:719015-719034 None:intergenic 45.0%
!! ATGATCGGGACTTGGTGTTA+TGG - chr1_1:719217-719236 Msa0000060:intron 45.0%
!! TGATCGGGACTTGGTGTTAT+GGG - chr1_1:719218-719237 Msa0000060:intron 45.0%
AACTACCCAATGTGGGACTT+AGG + chr1_1:719247-719266 None:intergenic 45.0%
! GGGATAAATCCCTTGATAGC+TGG + chr1_1:719298-719317 None:intergenic 45.0%
! GGACCGAATGGAGTATTTCA+TGG + chr1_1:719409-719428 None:intergenic 45.0%
! TTCGGCTTGTGCTCTTGAAA+AGG - chr1_1:719795-719814 Msa0000060:intron 45.0%
! GAGTGGAGAAAGTGCAAAAG+AGG - chr1_1:719865-719884 Msa0000060:CDS 45.0%
!!! GCACTTTGGTTCTTTTGGAG+GGG + chr1_1:719995-720014 None:intergenic 45.0%
! GGTGGAAAAAGCATGCACTT+TGG + chr1_1:720009-720028 None:intergenic 45.0%
!!! AGTGCATGCTTTTTCCACCT+CGG - chr1_1:720010-720029 Msa0000060:intron 45.0%
TCAGAAAAGAACATCCGAGG+TGG + chr1_1:720027-720046 None:intergenic 45.0%
CCTTCAGAAAAGAACATCCG+AGG + chr1_1:720030-720049 None:intergenic 45.0%
! CCTCGGATGTTCTTTTCTGA+AGG - chr1_1:720027-720046 Msa0000060:intron 45.0%
TCCGACAGAAGATATACCTG+AGG - chr1_1:720198-720217 Msa0000060:intron 45.0%
CCCTCAGGTATATCTTCTGT+CGG + chr1_1:720202-720221 None:intergenic 45.0%
CCGACAGAAGATATACCTGA+GGG - chr1_1:720199-720218 Msa0000060:intron 45.0%
GCAGTAAATGATGATCCCTC+AGG + chr1_1:720217-720236 None:intergenic 45.0%
GAGGGATCATCATTTACTGC+TGG - chr1_1:720217-720236 Msa0000060:intron 45.0%
TGGAGAAAGAATGCACGAGT+TGG - chr1_1:720237-720256 Msa0000060:intron 45.0%
!! AAGAATGCACGAGTTGGTGA+AGG - chr1_1:720243-720262 Msa0000060:intron 45.0%
! TCATTTCAGTGCCTGGCTTT+GGG + chr1_1:720553-720572 None:intergenic 45.0%
TTCATTTCAGTGCCTGGCTT+TGG + chr1_1:720554-720573 None:intergenic 45.0%
GTCTACTATATGCCGCTATC+TGG + chr1_1:720757-720776 None:intergenic 45.0%
! TGCTTTCTAGCAGTCTCTGT+AGG - chr1_1:721192-721211 Msa0000060:intron 45.0%
TCTCTGTAGGAACTTCTGGT+TGG - chr1_1:721205-721224 Msa0000060:intron 45.0%
! TTGCCTTTGAAGAAGCCGTA+TGG - chr1_1:721246-721265 Msa0000060:intron 45.0%
ACTCCATACGGCTTCTTCAA+AGG + chr1_1:721252-721271 None:intergenic 45.0%
AGAAGCCGTATGGAGTTGTT+CGG - chr1_1:721256-721275 Msa0000060:intron 45.0%
CTTCTGTCATTCTTTAGCCC+AGG - chr1_1:721493-721512 Msa0000060:intron 45.0%
GAATGCTTATCGTCAACCCT+GGG + chr1_1:721513-721532 None:intergenic 45.0%
TGAATGCTTATCGTCAACCC+TGG + chr1_1:721514-721533 None:intergenic 45.0%
GAAAAGGTAAAGCCGAAGGT+CGG + chr1_1:721557-721576 None:intergenic 45.0%
! ACCTTCGGCTTTACCTTTTC+TGG - chr1_1:721557-721576 Msa0000060:intron 45.0%
TCCAGAAAAGGTAAAGCCGA+AGG + chr1_1:721561-721580 None:intergenic 45.0%
! CCATGTCGATTGAACTTGAC+AGG + chr1_1:721585-721604 None:intergenic 45.0%
CCTGTCAAGTTCAATCGACA+TGG - chr1_1:721582-721601 Msa0000060:intron 45.0%
GAAGATGGATATTGGCGTTC+AGG - chr1_1:721634-721653 Msa0000060:intron 45.0%
ACGGTTTCAAGCTTGAGCAA+AGG + chr1_1:721744-721763 None:intergenic 45.0%
CGAGCTTGATATGTCTAGCA+CGG + chr1_1:721763-721782 None:intergenic 45.0%
!! GAAGAGGAATCCTCTGAAAC+AGG + chr1_1:721792-721811 None:intergenic 45.0%
TTACACCAGTCTGAACAAGG+AGG + chr1_1:722139-722158 None:intergenic 45.0%
!!! AAATTTAAAACAAAAAATAA+AGG - chr1_1:714483-714502 Msa0000060:intron 5.0%
!!! AATTTAAAACAAAAAATAAA+GGG - chr1_1:714484-714503 Msa0000060:intron 5.0%
!!! TAGTAATTTTTTAATATATA+TGG - chr1_1:718821-718840 Msa0000060:CDS 5.0%
!!! AGTAATTTTTTAATATATAT+GGG - chr1_1:718822-718841 Msa0000060:CDS 5.0%
AGAGAGAGAGAGAGAGAGTG+GGG + chr1_1:710148-710167 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGT+GGG + chr1_1:710149-710168 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+TGG + chr1_1:710150-710169 None:intergenic 50.0%
CAAGGAAGAGAGAGAGCTTG+AGG - chr1_1:710943-710962 Msa0000060:CDS 50.0%
AACTCATACACACAGCTGCG+GGG + chr1_1:711458-711477 None:intergenic 50.0%
! TTGAGTTTCCCTGCTGCTTG+TGG - chr1_1:711626-711645 Msa0000060:CDS 50.0%
!! TGAGGCACTGAGATCAATCG+CGG - chr1_1:711805-711824 Msa0000060:intron 50.0%
ACTGAGATCAATCGCGGAGT+TGG - chr1_1:711811-711830 Msa0000060:intron 50.0%
GTAGAGTTTGAATCTGGGCC+TGG + chr1_1:713485-713504 None:intergenic 50.0%
CTATCCTCAGGGAAGGAAGA+AGG + chr1_1:713634-713653 None:intergenic 50.0%
TCTTCCTTCCCTGAGGATAG+TGG - chr1_1:713634-713653 Msa0000060:intron 50.0%
!! TGTTCTGGGGGTCAAGTCAA+TGG - chr1_1:713882-713901 Msa0000060:intron 50.0%
GGGTTAAAATAGCGTGGGAG+TGG - chr1_1:714505-714524 Msa0000060:intron 50.0%
CAGAGGCTAAACCAGAAGCT+AGG + chr1_1:714704-714723 None:intergenic 50.0%
TTGGTTGGACTACCAATCGC+CGG + chr1_1:714795-714814 None:intergenic 50.0%
CTTTGACGACAACGCTTGGT+TGG + chr1_1:714810-714829 None:intergenic 50.0%
! CAACCAAGCGTTGTCGTCAA+AGG - chr1_1:714808-714827 Msa0000060:intron 50.0%
CATCCTTTGACGACAACGCT+TGG + chr1_1:714814-714833 None:intergenic 50.0%
GGCGAAACGAACTGAAAAGG+TGG + chr1_1:714920-714939 None:intergenic 50.0%
!!! TTCGTTTCGCCGGCTCATTT+TGG - chr1_1:714929-714948 Msa0000060:intron 50.0%
AAAGTGGGACCCACAAGATG+GGG + chr1_1:715100-715119 None:intergenic 50.0%
CAAAGTGGGACCCACAAGAT+GGG + chr1_1:715101-715120 None:intergenic 50.0%
TCAAAGTGGGACCCACAAGA+TGG + chr1_1:715102-715121 None:intergenic 50.0%
ATCTTGTGGGTCCCACTTTG+AGG - chr1_1:715101-715120 Msa0000060:intron 50.0%
TCTTGTGGGTCCCACTTTGA+GGG - chr1_1:715102-715121 Msa0000060:intron 50.0%
CAGCGGAAAACCCTCAAAGT+GGG + chr1_1:715115-715134 None:intergenic 50.0%
CTGTTGGACTGCCATCAAAC+TGG + chr1_1:715252-715271 None:intergenic 50.0%
! CAGTTTGATGGCAGTCCAAC+AGG - chr1_1:715250-715269 Msa0000060:intron 50.0%
TGGCCAACAAAGAAGCCTGT+TGG + chr1_1:715268-715287 None:intergenic 50.0%
GGCAAACCTTGACCATTGCA+AGG + chr1_1:715416-715435 None:intergenic 50.0%
AACGGGTCAAGAGACAGAGA+TGG + chr1_1:715443-715462 None:intergenic 50.0%
TGAAGCATGGGACACACGAT+TGG - chr1_1:715535-715554 Msa0000060:intron 50.0%
CAGTGGGTGAATGAGGTTGA+AGG + chr1_1:715591-715610 None:intergenic 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG + chr1_1:715763-715782 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG + chr1_1:715764-715783 None:intergenic 50.0%
GAGAGAGAGAGAGAGTGAGA+GGG + chr1_1:715933-715952 None:intergenic 50.0%
AGAGAGAGAGAGAGAGTGAG+AGG + chr1_1:715934-715953 None:intergenic 50.0%
CCTACAAAAAGACCGTGTCC+TGG + chr1_1:716140-716159 None:intergenic 50.0%
! CCAGGACACGGTCTTTTTGT+AGG - chr1_1:716137-716156 Msa0000060:intron 50.0%
GCTCGAATATGTAACTGGCG+GGG - chr1_1:716280-716299 Msa0000060:intron 50.0%
! CGGGGCTGATGTACAAGTTT+TGG - chr1_1:716298-716317 Msa0000060:intron 50.0%
GCCACTCTGCTGCAAACTAA+AGG - chr1_1:716338-716357 Msa0000060:intron 50.0%
GGTGAGGAAGACTCCATTCA+AGG - chr1_1:716919-716938 Msa0000060:intron 50.0%
GTGGCAAGAAAGCTGTCTTG+CGG - chr1_1:716952-716971 Msa0000060:intron 50.0%
GGGCTTGATACCACGTTTGA+AGG + chr1_1:717779-717798 None:intergenic 50.0%
CCCTCGTGTACGTAGATTTC+AGG - chr1_1:717796-717815 Msa0000060:intron 50.0%
GTCCCTAACTGCTTATGGGT+AGG - chr1_1:717887-717906 Msa0000060:intron 50.0%
TCAGCTGTTACTGGAGGAAC+AGG + chr1_1:718336-718355 None:intergenic 50.0%
TAAAGTTAGCGACACCAGGC+AGG + chr1_1:718632-718651 None:intergenic 50.0%
! AGACACTATGGGATGGTGGT+TGG - chr1_1:718907-718926 Msa0000060:intron 50.0%
AGAATTCAACAACCACCGCC+TGG - chr1_1:718962-718981 Msa0000060:intron 50.0%
!! GATCGGGACTTGGTGTTATG+GGG - chr1_1:719219-719238 Msa0000060:intron 50.0%
! TTGATAGCTGGCTGTCAAGG+GGG + chr1_1:719286-719305 None:intergenic 50.0%
! CTTGATAGCTGGCTGTCAAG+GGG + chr1_1:719287-719306 None:intergenic 50.0%
! CCTTGATAGCTGGCTGTCAA+GGG + chr1_1:719288-719307 None:intergenic 50.0%
CCTTGACAGCCAGCTATCAA+GGG - chr1_1:719286-719305 Msa0000060:intron 50.0%
!! TGGTTCTTTTGGAGGGGATG+AGG + chr1_1:719989-720008 None:intergenic 50.0%
TTGGTTCCCCTCTCTCTTGT+AGG - chr1_1:720400-720419 Msa0000060:intron 50.0%
AATTCTCGAGCCCAGACTTC+TGG - chr1_1:720515-720534 Msa0000060:intron 50.0%
!! CCAGGCACTGAAATGAACCT+CGG - chr1_1:720557-720576 Msa0000060:intron 50.0%
CAAGGCACAGCATTAACTGC+AGG + chr1_1:721135-721154 None:intergenic 50.0%
GCAGTCTCTGTAGGAACTTC+TGG - chr1_1:721201-721220 Msa0000060:intron 50.0%
GAAGCCGTATGGAGTTGTTC+GGG - chr1_1:721257-721276 Msa0000060:intron 50.0%
GCAACCCGAACAACTCCATA+CGG + chr1_1:721264-721283 None:intergenic 50.0%
CATACATTGCACCCAGCCAA+AGG + chr1_1:721291-721310 None:intergenic 50.0%
!! GGGAGGTGTTGTATGTGAAG+AGG + chr1_1:721808-721827 None:intergenic 50.0%
TGAGATAGGCCTTGCGGACA+AGG + chr1_1:711379-711398 None:intergenic 55.0%
TCCGCAAGGCCTATCTCATC+TGG - chr1_1:711381-711400 Msa0000060:intron 55.0%
GCCAGATGAGATAGGCCTTG+CGG + chr1_1:711385-711404 None:intergenic 55.0%
CCTAAGCACCACAAGCAGCA+GGG + chr1_1:711637-711656 None:intergenic 55.0%
ACCTAAGCACCACAAGCAGC+AGG + chr1_1:711638-711657 None:intergenic 55.0%
AAGGGTCACAGCACGTACAG+CGG + chr1_1:713121-713140 None:intergenic 55.0%
CTCAGGGAAGGAAGAAGGAC+TGG + chr1_1:713629-713648 None:intergenic 55.0%
CAGTCCTTCTTCCTTCCCTG+AGG - chr1_1:713627-713646 Msa0000060:intron 55.0%
TCAGCCACTATCCTCAGGGA+AGG + chr1_1:713641-713660 None:intergenic 55.0%
ATAGCGTGGGAGTGGGAAGT+TGG - chr1_1:714513-714532 Msa0000060:intron 55.0%
TAGCGTGGGAGTGGGAAGTT+GGG - chr1_1:714514-714533 Msa0000060:intron 55.0%
ACAGGGTAGCCCTTTGACAG+AGG + chr1_1:714721-714740 None:intergenic 55.0%
! GCCGGCCTCTAGTTCAAACA+AGG + chr1_1:714777-714796 None:intergenic 55.0%
TTGAACTAGAGGCCGGCGAT+TGG - chr1_1:714780-714799 Msa0000060:intron 55.0%
GCCGGCGAAACGAACTGAAA+AGG + chr1_1:714923-714942 None:intergenic 55.0%
GCAGCGGAAAACCCTCAAAG+TGG + chr1_1:715116-715135 None:intergenic 55.0%
TCTGTCGTGTCATCAGTGCC+TGG - chr1_1:715654-715673 Msa0000060:CDS 55.0%
TGACCCCACTTAGTGGGACA+AGG - chr1_1:715757-715776 Msa0000060:intron 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG + chr1_1:715765-715784 None:intergenic 55.0%
CCACTTAGTGGGACAAGGCT+TGG - chr1_1:715762-715781 Msa0000060:intron 55.0%
CAGAGTGGCAAGCACACTCA+AGG + chr1_1:716327-716346 None:intergenic 55.0%
! GAGTCAATGCTGGATGGGCT+TGG - chr1_1:716441-716460 Msa0000060:intron 55.0%
CTCCATTCAAGGCTGTGCGT+TGG - chr1_1:716930-716949 Msa0000060:intron 55.0%
CACCAACGCACAGCCTTGAA+TGG + chr1_1:716935-716954 None:intergenic 55.0%
CATTCAAGGCTGTGCGTTGG+TGG - chr1_1:716933-716952 Msa0000060:intron 55.0%
TCGGCAGAGACACTATGGGA+TGG - chr1_1:718900-718919 Msa0000060:intron 55.0%
GCAGAGACACTATGGGATGG+TGG - chr1_1:718903-718922 Msa0000060:intron 55.0%
CTTTCAACGATTCCAGGCGG+TGG + chr1_1:718977-718996 None:intergenic 55.0%
!! AAGCAATTTTCAGGCGGGGC+TGG - chr1_1:719107-719126 Msa0000060:intron 55.0%
GGGTGCCTAAGTCCCACATT+GGG - chr1_1:719239-719258 Msa0000060:intron 55.0%
CCCTTGACAGCCAGCTATCA+AGG - chr1_1:719285-719304 Msa0000060:intron 55.0%
! CCCTTGATAGCTGGCTGTCA+AGG + chr1_1:719289-719308 None:intergenic 55.0%
GATGAGGACTCCATTGCTGG+AGG + chr1_1:719973-719992 None:intergenic 55.0%
AGCCCAGACTTCTGGACTTG+CGG - chr1_1:720523-720542 Msa0000060:intron 55.0%
TGCCGCAAGTCCAGAAGTCT+GGG + chr1_1:720528-720547 None:intergenic 55.0%
CCGAGGTTCATTTCAGTGCC+TGG + chr1_1:720560-720579 None:intergenic 55.0%
GTGGGATAGAGCGAGCATAG+CGG - chr1_1:720794-720813 Msa0000060:intron 55.0%
GGCACAGCATTAACTGCAGG+TGG + chr1_1:721132-721151 None:intergenic 55.0%
!! TGTTCGGGTTGCTGCACCTT+TGG - chr1_1:721272-721291 Msa0000060:intron 55.0%
GATATTGGCGTTCAGGGACG+AGG - chr1_1:721641-721660 Msa0000060:intron 55.0%
CTCGTCTGCTCCTGTTTCAG+AGG - chr1_1:721779-721798 Msa0000060:intron 55.0%
TAGGCTGTTTACTCCAGGGG+TGG - chr1_1:721863-721882 Msa0000060:five_prime_UTR 55.0%
AGGCTGTTTACTCCAGGGGT+GGG - chr1_1:721864-721883 Msa0000060:five_prime_UTR 55.0%
CACGAGGGAGCAGCTTCACA+GGG + chr1_1:710193-710212 None:intergenic 60.0%
ACACGAGGGAGCAGCTTCAC+AGG + chr1_1:710194-710213 None:intergenic 60.0%
TGTGAAGCTGCTCCCTCGTG+TGG - chr1_1:710193-710212 Msa0000060:three_prime_UTR 60.0%
CTGCTCGATCCTCCACACGA+GGG + chr1_1:710208-710227 None:intergenic 60.0%
ACTGCTCGATCCTCCACACG+AGG + chr1_1:710209-710228 None:intergenic 60.0%
GGGGATTCTCCTTGTCCGCA+AGG - chr1_1:711367-711386 Msa0000060:intron 60.0%
CTTCGCCGGGGTTTGAACCT+GGG - chr1_1:711431-711450 Msa0000060:intron 60.0%
! CCCTGCTGCTTGTGGTGCTT+AGG - chr1_1:711634-711653 Msa0000060:CDS 60.0%
! AATAGCGGGAAGGTGGCGTG+TGG + chr1_1:714886-714905 None:intergenic 60.0%
! GCAGCAAGCTTTGGTTGGCG+AGG - chr1_1:717391-717410 Msa0000060:intron 60.0%
GCTTTGGTTGGCGAGGCTTC+AGG - chr1_1:717398-717417 Msa0000060:intron 60.0%
! GGGGTGCCTAAGTCCCACAT+TGG - chr1_1:719238-719257 Msa0000060:intron 60.0%
GGGGATGAGGACTCCATTGC+TGG + chr1_1:719976-719995 None:intergenic 60.0%
CTGCCGCAAGTCCAGAAGTC+TGG + chr1_1:720529-720548 None:intergenic 60.0%
GGGTTGCTGCACCTTTGGCT+GGG - chr1_1:721277-721296 Msa0000060:intron 60.0%
ACACCTGCGGATCCGACCTT+CGG - chr1_1:721542-721561 Msa0000060:intron 60.0%
GAAGCTGCTCCCTCGTGTGG+AGG - chr1_1:710196-710215 Msa0000060:three_prime_UTR 65.0%
GCTAGGCTGGACACCTTCGC+CGG - chr1_1:711417-711436 Msa0000060:intron 65.0%
CTAGGCTGGACACCTTCGCC+GGG - chr1_1:711418-711437 Msa0000060:intron 65.0%
TAGGCTGGACACCTTCGCCG+GGG - chr1_1:711419-711438 Msa0000060:intron 65.0%
CCAGGTTCAAACCCCGGCGA+AGG + chr1_1:711433-711452 None:intergenic 65.0%
CCTTCGCCGGGGTTTGAACC+TGG - chr1_1:711430-711449 Msa0000060:intron 65.0%
GGGGTCCCAGGTTCAAACCC+CGG + chr1_1:711439-711458 None:intergenic 65.0%
TCACAGCACGTACAGCGGCG+CGG + chr1_1:713116-713135 None:intergenic 65.0%
CAGCGGGACCCACTTGGAAG+TGG + chr1_1:714965-714984 None:intergenic 65.0%
CCAGAACAGCGGGACCCACT+TGG + chr1_1:714971-714990 None:intergenic 65.0%
CCAAGTGGGTCCCGCTGTTC+TGG - chr1_1:714968-714987 Msa0000060:intron 65.0%
!! TTCAGGCGGGGCTGGCTTTG+TGG - chr1_1:719115-719134 Msa0000060:intron 65.0%
CTTGCGGCAGTCCCAAAGCC+AGG - chr1_1:720539-720558 Msa0000060:intron 65.0%
CGGGTTGCTGCACCTTTGGC+TGG - chr1_1:721276-721295 Msa0000060:intron 65.0%
AAGCCGAAGGTCGGATCCGC+AGG + chr1_1:721548-721567 None:intergenic 65.0%
ACACACAGCTGCGGGGTCCC+AGG + chr1_1:711451-711470 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 709917 722207 709917 ID=Msa0000060;Name=Msa0000060
chr1_1 mRNA 709917 722207 709917 ID=Msa0000060-mRNA-1;Parent=Msa0000060;Name=Msa0000060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=357|0.95|0.95|1|1|1|21|368|874
chr1_1 exon 709917 710614 709917 ID=Msa0000060-mRNA-1:exon:53;Parent=Msa0000060-mRNA-1
chr1_1 exon 710819 711027 710819 ID=Msa0000060-mRNA-1:exon:52;Parent=Msa0000060-mRNA-1
chr1_1 exon 711546 711702 711546 ID=Msa0000060-mRNA-1:exon:51;Parent=Msa0000060-mRNA-1
chr1_1 exon 711860 711918 711860 ID=Msa0000060-mRNA-1:exon:50;Parent=Msa0000060-mRNA-1
chr1_1 exon 712076 712147 712076 ID=Msa0000060-mRNA-1:exon:49;Parent=Msa0000060-mRNA-1
chr1_1 exon 712238 712343 712238 ID=Msa0000060-mRNA-1:exon:48;Parent=Msa0000060-mRNA-1
chr1_1 exon 713129 713266 713129 ID=Msa0000060-mRNA-1:exon:47;Parent=Msa0000060-mRNA-1
chr1_1 exon 714307 714372 714307 ID=Msa0000060-mRNA-1:exon:46;Parent=Msa0000060-mRNA-1
chr1_1 exon 714619 714729 714619 ID=Msa0000060-mRNA-1:exon:45;Parent=Msa0000060-mRNA-1
chr1_1 exon 715621 715691 715621 ID=Msa0000060-mRNA-1:exon:44;Parent=Msa0000060-mRNA-1
chr1_1 exon 715765 715853 715765 ID=Msa0000060-mRNA-1:exon:43;Parent=Msa0000060-mRNA-1
chr1_1 exon 718043 718368 718043 ID=Msa0000060-mRNA-1:exon:42;Parent=Msa0000060-mRNA-1
chr1_1 exon 718460 718646 718460 ID=Msa0000060-mRNA-1:exon:41;Parent=Msa0000060-mRNA-1
chr1_1 exon 718730 718853 718730 ID=Msa0000060-mRNA-1:exon:40;Parent=Msa0000060-mRNA-1
chr1_1 exon 718971 719079 718971 ID=Msa0000060-mRNA-1:exon:39;Parent=Msa0000060-mRNA-1
chr1_1 exon 719656 719713 719656 ID=Msa0000060-mRNA-1:exon:38;Parent=Msa0000060-mRNA-1
chr1_1 exon 719837 719933 719837 ID=Msa0000060-mRNA-1:exon:37;Parent=Msa0000060-mRNA-1
chr1_1 exon 720043 720176 720043 ID=Msa0000060-mRNA-1:exon:36;Parent=Msa0000060-mRNA-1
chr1_1 exon 720254 720330 720254 ID=Msa0000060-mRNA-1:exon:35;Parent=Msa0000060-mRNA-1
chr1_1 exon 720417 720468 720417 ID=Msa0000060-mRNA-1:exon:34;Parent=Msa0000060-mRNA-1
chr1_1 exon 721798 722207 721798 ID=Msa0000060-mRNA-1:exon:33;Parent=Msa0000060-mRNA-1
chr1_1 five_prime_UTR 721851 722207 721851 ID=Msa0000060-mRNA-1:five_prime_utr;Parent=Msa0000060-mRNA-1
chr1_1 CDS 721798 721850 721798 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 720417 720468 720417 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 720254 720330 720254 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 720043 720176 720043 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 719837 719933 719837 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 719656 719713 719656 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 718971 719079 718971 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 718730 718853 718730 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 718460 718646 718460 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 718043 718368 718043 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 715765 715853 715765 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 715621 715691 715621 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 714619 714729 714619 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 714307 714372 714307 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 713129 713266 713129 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 712238 712343 712238 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 712076 712147 712076 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 711860 711918 711860 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 711546 711702 711546 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 710819 711027 710819 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 CDS 710285 710614 710285 ID=Msa0000060-mRNA-1:cds;Parent=Msa0000060-mRNA-1
chr1_1 three_prime_UTR 709917 710284 709917 ID=Msa0000060-mRNA-1:three_prime_utr;Parent=Msa0000060-mRNA-1
Gene Sequence

>Msa0000060

ATGTGGTTTTCCTTCTGGAGATCCAAAGATCGTTTTTCATTGGATCAACTCAGGTACTTAGCTGATCAGTTGACAAAAGTTCAAATAGTTAATGAGGTTAACAAGGATTTTGTTATTGAGGCACTGAGATCAATCGCGGAGTTGGTAACATATGGCGACCAACATGACCCAACCTTTTTCGAATTTTTCATGGAAAAGCAAGTTGTGGGGGATTTTGTACGTATTCTAAAACTTAGCAGGACTATTAGCATTCCACTTCAGTTGCTACAAACTGTTAGCATTATGATCCAAAACCTACAGAGTGAACATGCTATATACTATATGTTCAGTAATGAACATATGAACTACCTAATTACGTATTCATTTGATTTCCGCAATGAAGAGCTGTTGTCATACTACATATCTTTTTTAAGAGCAATTGGTGGGAAATTAAACAAGAATACTATTTCTCTGCTTGTGAAGACTCACAATGACGAAGTAGTTTCATTTCCATTATATGTCGAGGCGATACGCTTTGCCTTTCATGAGGAGAGCATGATCCGCGCCGCTGTACGTGCTGTGACCCTTAATGTTTATCATGTTGGAGATGACTCTGTTAATAGATATATAACTAGCGCACCTCACACAGATTACTTCTCAAATCTGGTTTCCTTTTTTAGGAAGCAGTGTATGGATTTAAACAGATTGATCTCTGAGACGCTGAAAAATCCAGGCCCAGATTCAAACTCTACCGTTACTACTGCTGTAGATGAAATTGAGGATAATCTATATTACTTTAGTGATGTAATCTCTGCTGGAATTCCTGATGTTGAAAGGTTAATAACAGACAGCATTCTAACACTTCTGATTTTTCCAGTCCTTCTTCCTTCCCTGAGGATAGTGGCTGATAATGATATGCAAAGTGGTGTTGTGACTTCTCTTTACTTGCTTTGTTGCATCTTGAGGATAGTCAAGATCAAAGATTTGGCAAATACAATAGTTGCTGCTCTTTATTACCCCTTAGAGTCCTTTACAAAATGTTCTGGGGGTCAAGTCAATGGCTATATACCTGACCATGGTTTTACATCTGAAAGCAACGGGATAGATAATGATAACCTTGCTGAGAATAGTACAAAATGTTTGGTGGTCAATGTGCCATGCTCATCTAGTTCTTCAGATTGTCATCCACAAAGTATCACCATGCTAAATAATGGTAGCAGTTCAAATGTGGCTTTGAGGGAAGTTTTGCTCGAATATGTAACTGGCGGGGCTGATGTACAAGTTTTGGGTTCCTTGAGTGTGCTTGCCACTCTGCTGCAAACTAAAGAACTTGATGAGTCAATGCTGGATGGGCTTGGAATTCTTCCACAACGCAAACAGCAAAAAAAGCTCTTACTGCAAGCTTTGGTTGGCGAGGCTTCAGGAGAAGAACAACTTTTTTCTTCTGAAAGTAGCTCAACAAGAGATGGTATTGCATGTGGGCTTGATGTTTATCTTAATAAGATTAAGGAGCAGTATAGTGTATTTTTTCAGCCTTCAAACGTGGTATCAAGCCCTCGTGTACGTAGATTTCAGGTGCTCGATGCATTAGTGAGCCTCTTTTGCCGTTCTAATATATCGGCAGAGACACTATGGGATGGTGGTTGGCTTTTACGCCAGTTGCTTCCTTATAGTGAGTCAGAATTCAACAACCACCGCCTGGAATCGTTGAAAATTTCTTACGAGAATTCGGCTTGTGCTCTTGAAAAGGAAGTTAAAGGTTTTTGGCCTGACCTTCTTATTACTGTTCTTTGTGATGAGTGGAGAAAGTGCAAAAGAGCAATGGAGTCCTCATCCCCTCCAAAAGAACCAAAGTGCATGCTTTTTCCACCTCGGATGTTCTTTTCTGAAGAAGATATACCTGAGGGATCATCATTTACTGCTGGAGAAAGAATGCACGAGTTGGTGAAGGTATTTGTACTTCTGCACCAACTTCAAATATTCACTCACGGTAGAGCTTTGCCTGATCAACCTCTTATTTATCATCCTTGTGATCATCGTACGAATTCTCGAGCCCAGACTTCTGGACTTGCGGCAGTCCCAAAGCCAGGCACTGAAATGAACCTCGGACAAAAAAATAACCTATCTGTCTCTTATTTACCACCTGCAGTTAATGCTGTGCCTTGTAGAATTGCTTTCGAGAGGGGCAAAGAGCGCCATTTTTGCTTTCTAGCAGTCTCTGTAGGAACTTCTGGTTGGCTCGTGCTTGCAGAAGAATTGCCTTTGAAGAAGCCGTATGGAGTTGTTCGGGTTGCTGCACCTTTGGCTGGGTGCAATCCCAGGGTTGACGATAAGCATTCAAAATGGTTACACCTGCGGATCCGACCTTCGGCTTTACCTTTTCTGGATCCTGTCAAGTTCAATCGACATGGGAAGTTAAAGACAAAAGCTTTTGTTGATGGAAGATGGATATTGGCGTTCAGGGACGAGGAGTCTTGCAAAAATGCTTTTCTCATGATCCGTGAAGAGATTAATTATCTATGCGATGAGGTTCATAGAAGAATAAAACCTTTGCTCAAGCTTGAAACCGTGCTAGACATATCAAGCTCGTCTGCTCCTGTTTCAGAGGATTCCTCTTCACATACAACACCTCCCGATTCATTGTAA
Protein sequence

>Msa0000060

MWFSFWRSKDRFSLDQLRYLADQLTKVQIVNEVNKDFVIEALRSIAELVTYGDQHDPTFFEFFMEKQVVGDFVRILKLSRTISIPLQLLQTVSIMIQNLQSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAIGGKLNKNTISLLVKTHNDEVVSFPLYVEAIRFAFHEESMIRAAVRAVTLNVYHVGDDSVNRYITSAPHTDYFSNLVSFFRKQCMDLNRLISETLKNPGPDSNSTVTTAVDEIEDNLYYFSDVISAGIPDVERLITDSILTLLIFPVLLPSLRIVADNDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALYYPLESFTKCSGGQVNGYIPDHGFTSESNGIDNDNLAENSTKCLVVNVPCSSSSSDCHPQSITMLNNGSSSNVALREVLLEYVTGGADVQVLGSLSVLATLLQTKELDESMLDGLGILPQRKQQKKLLLQALVGEASGEEQLFSSESSSTRDGIACGLDVYLNKIKEQYSVFFQPSNVVSSPRVRRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSESEFNNHRLESLKISYENSACALEKEVKGFWPDLLITVLCDEWRKCKRAMESSSPPKEPKCMLFPPRMFFSEEDIPEGSSFTAGERMHELVKVFVLLHQLQIFTHGRALPDQPLIYHPCDHRTNSRAQTSGLAAVPKPGTEMNLGQKNNLSVSYLPPAVNAVPCRIAFERGKERHFCFLAVSVGTSGWLVLAEELPLKKPYGVVRVAAPLAGCNPRVDDKHSKWLHLRIRPSALPFLDPVKFNRHGKLKTKAFVDGRWILAFRDEESCKNAFLMIREEINYLCDEVHRRIKPLLKLETVLDISSSSAPVSEDSSSHTTPPDSL*