Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0001750 | sp|F4HXV6|NU155_ARATH | 72.806 | 1504 | 361 | 11 | 1 | 1496 | 1 | 1464 | 0.0 | 2144 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001750 | Msa0930800 | 0.950735 | 8.898616e-109 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0001750 | MtrunA17_Chr8g0391741 | 98.200 | 1500 | 10 | 2 | 1 | 1499 | 1 | 1484 | 0.0 | 3009 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0001750 | AT1G14850.1 | 72.806 | 1504 | 361 | 11 | 1 | 1496 | 1 | 1464 | 0.0 | 2144 |
Find 411 sgRNAs with CRISPR-Local
Find 825 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATACCAAATGTATTCAATTT+TGG | 0.147828 | 1_1:-3465101 | Msa0001750:CDS |
GCGTGTTGCATTTGCAAAAT+TGG | 0.197733 | 1_1:+3460652 | None:intergenic |
CAGTTGCTAGCCAAGGAATT+AGG | 0.200530 | 1_1:-3459358 | Msa0001750:CDS |
TCACAAGCCTAGCTGTTTAA+AGG | 0.209434 | 1_1:-3464721 | Msa0001750:CDS |
CAAGATTACTCTTTCCTCTA+TGG | 0.211410 | 1_1:-3463846 | Msa0001750:CDS |
AAGCTTCAGGTTTATGTTCT+TGG | 0.213755 | 1_1:-3465005 | Msa0001750:CDS |
TCAGGCACTTCATTTGAAAA+TGG | 0.218295 | 1_1:-3463784 | Msa0001750:CDS |
CTTATAGATCAAGCTATTTC+AGG | 0.232315 | 1_1:-3459937 | Msa0001750:CDS |
AGTCAAGTACTTTGAACTTT+TGG | 0.241689 | 1_1:-3461821 | Msa0001750:CDS |
ACGTCCATGGAGACTAATTT+TGG | 0.259396 | 1_1:+3458740 | None:intergenic |
GGACACCCAGCTGAACAATT+TGG | 0.272008 | 1_1:+3462250 | None:intergenic |
GCCCATGCCCTACGTATTTC+AGG | 0.275775 | 1_1:+3468541 | None:intergenic |
ACATCCAATTCTGTTCAAAA+TGG | 0.277354 | 1_1:-3460707 | Msa0001750:CDS |
AGCATCCGTAATCTAAGATT+TGG | 0.283755 | 1_1:+3459494 | None:intergenic |
CTGTACTTTGCTAACTATTC+TGG | 0.285107 | 1_1:-3460000 | Msa0001750:CDS |
CAAATCTGATGATAGCTCTT+TGG | 0.287559 | 1_1:+3460622 | None:intergenic |
TTTCCATGAGTATCTTTATC+AGG | 0.289269 | 1_1:-3462211 | Msa0001750:CDS |
GAAGATTTCTACAATCGTTT+TGG | 0.289778 | 1_1:-3464126 | Msa0001750:CDS |
GACCCCTCACGGAAGGAATT+TGG | 0.296507 | 1_1:-3462336 | Msa0001750:CDS |
AAGTACCTCCCAGAGTTTAA+AGG | 0.300673 | 1_1:+3460562 | None:intergenic |
TGCTGGAACTCTTATCCTTT+CGG | 0.301665 | 1_1:-3464574 | Msa0001750:CDS |
AGTGCTTTGCGGTCTCTTAA+AGG | 0.313525 | 1_1:-3462360 | Msa0001750:CDS |
GAATCCACCGCCTATTATTA+TGG | 0.320721 | 1_1:+3459394 | None:intergenic |
TTAACGGCGATGTAGGGTTT+TGG | 0.322368 | 1_1:+3469514 | None:intergenic |
AGAGTGGCGGGCAAAATTTC+CGG | 0.323384 | 1_1:+3469556 | None:intergenic |
AACACGGCCTTCTCCTCCTT+GGG | 0.325527 | 1_1:-3464691 | Msa0001750:CDS |
AGCCCTTGTTTCTGCTTGTA+AGG | 0.325530 | 1_1:-3459582 | Msa0001750:CDS |
TAGCATGGGCCAGGTTGTTC+AGG | 0.325776 | 1_1:-3463920 | Msa0001750:CDS |
ACTGGTTCTTCCATAATAAT+AGG | 0.333058 | 1_1:-3459404 | Msa0001750:CDS |
GCATCCGTAATCTAAGATTT+GGG | 0.338076 | 1_1:+3459495 | None:intergenic |
AAAGGAAGTTTAAGTGCTTC+AGG | 0.340254 | 1_1:-3463802 | Msa0001750:CDS |
TATGAGCTTATTTATTCAAC+TGG | 0.342352 | 1_1:-3465398 | Msa0001750:CDS |
GAGAATGAATTGTTGGAGTA+TGG | 0.343375 | 1_1:-3462168 | Msa0001750:CDS |
GAGGAGTTCCCGGGCATTAC+GGG | 0.344091 | 1_1:-3464460 | Msa0001750:CDS |
CTACCTGTAATGGTTATAAA+AGG | 0.344326 | 1_1:-3463820 | Msa0001750:CDS |
AAGAGTTCCAGCAGAATAAT+AGG | 0.349609 | 1_1:+3464584 | None:intergenic |
GGAAAATTCTGTCGGGTGAT+TGG | 0.350381 | 1_1:+3462229 | None:intergenic |
TTTGGAACCATGGCTCTTGC+TGG | 0.350797 | 1_1:-3464648 | Msa0001750:CDS |
TAGATGGCCAATACCTCAAC+AGG | 0.354221 | 1_1:+3467726 | None:intergenic |
CGCGGTAAACCCCTTCTGTT+TGG | 0.356475 | 1_1:+3458946 | None:intergenic |
GCTCCAAAATTGAATACATT+TGG | 0.357663 | 1_1:+3465098 | None:intergenic |
CGAGGAGTTCCCGGGCATTA+CGG | 0.358254 | 1_1:-3464461 | Msa0001750:CDS |
TTCAAAGTACTTGACTTGAT+TGG | 0.358695 | 1_1:+3461828 | None:intergenic |
TAAAACTGATCTCGGAGAAT+TGG | 0.359130 | 1_1:+3464149 | None:intergenic |
TTGACAATTCTTTGTTCCTC+TGG | 0.359523 | 1_1:-3468513 | Msa0001750:CDS |
TCTCTAGGGTGAGTAGAATA+AGG | 0.360839 | 1_1:+3469218 | None:intergenic |
AAGATCGAAGTTTGTGTTCA+AGG | 0.362765 | 1_1:+3463722 | None:intergenic |
AGAGAGCTTCACCAGATCTA+AGG | 0.363992 | 1_1:+3463340 | None:intergenic |
TTTAAGAAGGGCAATAGGTC+AGG | 0.365266 | 1_1:+3462141 | None:intergenic |
CAGGCACTTCATTTGAAAAT+GGG | 0.366839 | 1_1:-3463783 | Msa0001750:CDS |
TATGGTTGTGTAGCAGGATT+AGG | 0.367725 | 1_1:-3463655 | Msa0001750:CDS |
TGTTCCTCGCCACTATATTC+AGG | 0.369116 | 1_1:+3467831 | None:intergenic |
CTTCTGTTTGGCTCTGTGGA+AGG | 0.372797 | 1_1:+3458958 | None:intergenic |
GGCTGGTGTTGAATCCATTC+AGG | 0.373807 | 1_1:+3464745 | None:intergenic |
AAGGAAAATGCGGCCCTTAT+CGG | 0.376997 | 1_1:+3465442 | None:intergenic |
TATGATCAATTGTTATCAAA+TGG | 0.378369 | 1_1:-3459533 | Msa0001750:CDS |
TTAGTTGGAGTGTGCTGCTC+TGG | 0.379312 | 1_1:-3465566 | Msa0001750:CDS |
TTTAAGAGTGAGAGAATTAA+CGG | 0.380728 | 1_1:+3469498 | None:intergenic |
GTTTATGTTCTTGGACCAAT+TGG | 0.382747 | 1_1:-3464996 | Msa0001750:CDS |
CAGTTCCATCACCAGGATAA+AGG | 0.382913 | 1_1:+3459866 | None:intergenic |
AACTTCTCCGATGGGCCAAT+CGG | 0.383511 | 1_1:-3461866 | Msa0001750:CDS |
CTATACTCAGAAATTGAGTT+TGG | 0.384122 | 1_1:-3464348 | Msa0001750:CDS |
GGTGGTTCTGCATTGGGTGC+TGG | 0.384567 | 1_1:-3463604 | Msa0001750:CDS |
TTGCTAAGATTAAAAGATAC+TGG | 0.386459 | 1_1:+3467751 | None:intergenic |
GTTAGTGGCGGTCTCACCTT+TGG | 0.394157 | 1_1:-3464666 | Msa0001750:CDS |
ATGATCAATTGTTATCAAAT+GGG | 0.395420 | 1_1:-3459532 | Msa0001750:CDS |
AAGGCTTATATCTGCTCTAA+TGG | 0.395958 | 1_1:-3463184 | Msa0001750:CDS |
TCTCCTCCTTGGGGTGTTAG+TGG | 0.397551 | 1_1:-3464681 | Msa0001750:CDS |
GCGGTGGAGCCGCAAATAAA+AGG | 0.397846 | 1_1:-3463522 | Msa0001750:CDS |
TCCTCCTTGGCAGTATATGT+TGG | 0.401657 | 1_1:+3464253 | None:intergenic |
GTATCTTCTTTACCAGTTGA+AGG | 0.401716 | 1_1:-3464432 | Msa0001750:CDS |
CAACACGGCCTTCTCCTCCT+TGG | 0.402833 | 1_1:-3464692 | Msa0001750:CDS |
AAGGGAAGCTTGCTGTTCTT+CGG | 0.404633 | 1_1:-3460793 | Msa0001750:CDS |
TGATCATATGCGTTCAATAC+AGG | 0.404637 | 1_1:+3459548 | None:intergenic |
AGCCGCCTTAAAATGTCTAA+TGG | 0.405006 | 1_1:+3464180 | None:intergenic |
GACTGAAGAGATGAAGCTTC+AGG | 0.405306 | 1_1:-3465018 | Msa0001750:CDS |
CCTCCTTGGCAGTATATGTT+GGG | 0.406408 | 1_1:+3464254 | None:intergenic |
CTTATTTATTCAACTGGCTC+AGG | 0.407126 | 1_1:-3465392 | Msa0001750:CDS |
AAGTTTCTAATGTTTCATAT+TGG | 0.408310 | 1_1:-3458800 | Msa0001750:three_prime_UTR |
GAACAGGTACGAGGAGTTCC+CGG | 0.409786 | 1_1:-3464470 | Msa0001750:CDS |
GTAAGTGGTTCCATTCTATA+TGG | 0.410972 | 1_1:-3463628 | Msa0001750:CDS |
AGTTGCTAGCCAAGGAATTA+GGG | 0.411342 | 1_1:-3459357 | Msa0001750:CDS |
CATGTCACTCGTCTGATTCA+AGG | 0.417185 | 1_1:-3463291 | Msa0001750:CDS |
TTTGAGGATCCAAGACTTGT+TGG | 0.417277 | 1_1:-3464003 | Msa0001750:CDS |
AGTACCTCCCAGAGTTTAAA+GGG | 0.418748 | 1_1:+3460563 | None:intergenic |
TGCTGTTCCCTTTAAACTCT+GGG | 0.419511 | 1_1:-3460570 | Msa0001750:CDS |
TGAACAGTAGCTGAAGTATC+TGG | 0.419603 | 1_1:+3464375 | None:intergenic |
GGACTCTATGGTTGTGTAGC+AGG | 0.419623 | 1_1:-3463661 | Msa0001750:CDS |
TGTTGACCCTGTTGTTGAAA+TGG | 0.420741 | 1_1:-3465075 | Msa0001750:CDS |
TGAGGGCAATGGAGTGCATT+AGG | 0.421519 | 1_1:-3463371 | Msa0001750:CDS |
CAAAGAGGAACTAGAGCATA+TGG | 0.422462 | 1_1:-3460756 | Msa0001750:CDS |
CATCCCCAAATCTTAGATTA+CGG | 0.423921 | 1_1:-3459499 | Msa0001750:CDS |
TCGGATGGTATTGTATAATC+TGG | 0.425433 | 1_1:+3465494 | None:intergenic |
TATGGTGGTGGTTCTGCATT+GGG | 0.426235 | 1_1:-3463610 | Msa0001750:CDS |
GGGTTGCCCGAGCTACTATA+AGG | 0.427377 | 1_1:-3462965 | Msa0001750:CDS |
TCCTCACCATCAGGTAATCT+AGG | 0.432690 | 1_1:-3464492 | Msa0001750:CDS |
GGTGAGATGCAAACAATAGA+TGG | 0.434239 | 1_1:+3464861 | None:intergenic |
TATAAGCCAAATTGTTCAGC+TGG | 0.434986 | 1_1:-3462256 | Msa0001750:CDS |
CCTTCTAGCGGAAGCCTGAA+TGG | 0.436243 | 1_1:-3464759 | Msa0001750:CDS |
AACCAGAGGAGAGGACTCTA+TGG | 0.437359 | 1_1:-3463673 | Msa0001750:CDS |
TCCGTCAGTAGAAGGCCTTC+CGG | 0.438022 | 1_1:+3461738 | None:intergenic |
ATATGGTGGTGGTTCTGCAT+TGG | 0.439770 | 1_1:-3463611 | Msa0001750:CDS |
GTAGGAACTCCGTCAGTAGA+AGG | 0.440301 | 1_1:+3461730 | None:intergenic |
CTTGGGCCCCGCCTTTATCC+TGG | 0.440689 | 1_1:-3459877 | Msa0001750:CDS |
TTCTGTTTGGCTCTGTGGAA+GGG | 0.440953 | 1_1:+3458959 | None:intergenic |
CCATTCAGGCTTCCGCTAGA+AGG | 0.441659 | 1_1:+3464759 | None:intergenic |
TAGTCACAGCAGCTCTCTCC+AGG | 0.443276 | 1_1:+3462908 | None:intergenic |
CCTGTAAAACTGCATTGCTT+AGG | 0.445981 | 1_1:+3460894 | None:intergenic |
TTGTATCTTTCAATAAGAAC+AGG | 0.454146 | 1_1:+3468604 | None:intergenic |
GGGTGCTGGTGACCGAAGTA+TGG | 0.455558 | 1_1:-3463590 | Msa0001750:CDS |
ATGCTGTTCCCTTTAAACTC+TGG | 0.456809 | 1_1:-3460571 | Msa0001750:CDS |
GACTATAGATGATGAGGAAA+AGG | 0.457447 | 1_1:-3462890 | Msa0001750:CDS |
TTTAATGGCCCATCACCAAT+TGG | 0.457665 | 1_1:+3464981 | None:intergenic |
AGAATGAAAGGTACCTCTCT+AGG | 0.458345 | 1_1:+3469203 | None:intergenic |
TTTCTAATGTTTCATATTGG+AGG | 0.458663 | 1_1:-3458797 | Msa0001750:three_prime_UTR |
TGCTGCTCTGGAGGAGCAGA+TGG | 0.459140 | 1_1:-3465554 | Msa0001750:CDS |
TGGTTGAGGTAGCGAATACA+TGG | 0.459389 | 1_1:-3468636 | Msa0001750:CDS |
AGGCAGTTGCTCCTTAGATC+TGG | 0.460170 | 1_1:-3463351 | Msa0001750:CDS |
CTCGTTGTCAGTGATCGAAT+TGG | 0.461037 | 1_1:-3469305 | Msa0001750:CDS |
ACCCCTTCTGTTTGGCTCTG+TGG | 0.461256 | 1_1:+3458954 | None:intergenic |
TCATTATAAGCATCACCTGC+AGG | 0.463829 | 1_1:+3462450 | None:intergenic |
TTTCGATTCAAGGGTAGATA+AGG | 0.464480 | 1_1:+3464839 | None:intergenic |
TACTCAGAAATTGAGTTTGG+TGG | 0.465253 | 1_1:-3464345 | Msa0001750:CDS |
GAAAGCATTCGTCCTTCAAC+TGG | 0.465686 | 1_1:+3464420 | None:intergenic |
TTCGATTCAAGGGTAGATAA+GGG | 0.467152 | 1_1:+3464840 | None:intergenic |
GAGAGAATTAACGGCGATGT+AGG | 0.467571 | 1_1:+3469507 | None:intergenic |
CCATCAGGTAATCTAGGAAC+AGG | 0.468552 | 1_1:-3464486 | Msa0001750:CDS |
ATAATAAGCGACCTCATGTA+TGG | 0.470198 | 1_1:+3462101 | None:intergenic |
ACAAGGAGTGAAGGCATAGT+TGG | 0.470366 | 1_1:+3464540 | None:intergenic |
GTATGCGTCACTGCTGGTCT+AGG | 0.472775 | 1_1:-3465347 | Msa0001750:CDS |
CTTCAGCACCATGGGCATGA+TGG | 0.474911 | 1_1:-3464220 | Msa0001750:CDS |
AAGATTACTCTTTCCTCTAT+GGG | 0.474913 | 1_1:-3463845 | Msa0001750:CDS |
CTTCTTAGCCGTGGAAGCCC+TGG | 0.475577 | 1_1:-3462926 | Msa0001750:CDS |
TGTGTTTAATGCTAGCTTCG+AGG | 0.475776 | 1_1:-3464083 | Msa0001750:CDS |
CACAGGATGGGTACAGCCAC+TGG | 0.475790 | 1_1:-3459422 | Msa0001750:CDS |
AGCACTCAGTCCTCACCATC+AGG | 0.477707 | 1_1:-3464501 | Msa0001750:CDS |
AGACTCTGGAACTTTGCTTA+AGG | 0.478360 | 1_1:+3462840 | None:intergenic |
TGCTGCTGGTGGATTTAGCA+TGG | 0.478956 | 1_1:-3463935 | Msa0001750:CDS |
AAGGAATTTGGCTCTCCCAT+TGG | 0.479497 | 1_1:-3462324 | Msa0001750:CDS |
AAGTGTGGCATGTACCGATA+AGG | 0.481528 | 1_1:-3465456 | Msa0001750:CDS |
GTCTAGGAAGTGTAATTTCA+AGG | 0.481768 | 1_1:-3465331 | Msa0001750:intron |
AAATCACAAGTGTAGCAAAC+AGG | 0.482274 | 1_1:-3459331 | Msa0001750:intron |
TGTGGCATGCCAACAAGTCT+TGG | 0.482330 | 1_1:+3463994 | None:intergenic |
ACACATCGCAGCCGCCTCGC+CGG | 0.482650 | 1_1:+3464101 | None:intergenic |
GTTGGCATGCCACAACTTGA+AGG | 0.483372 | 1_1:-3463985 | Msa0001750:CDS |
TAAAGAAAATTGCTGAAGAA+AGG | 0.483809 | 1_1:-3464962 | Msa0001750:CDS |
AGGTCTTGAGAATGAATTGT+TGG | 0.485566 | 1_1:-3462175 | Msa0001750:CDS |
GCAGTATATGTTGGGTTGAG+AGG | 0.486330 | 1_1:+3464262 | None:intergenic |
AAATAATCATCAGTGCTTTG+CGG | 0.486588 | 1_1:-3462371 | Msa0001750:CDS |
TGCTCTGTGCTAAAGAGACT+TGG | 0.487524 | 1_1:-3459895 | Msa0001750:CDS |
TTGTAGGAGAGATTAAATAC+AGG | 0.487762 | 1_1:-3459638 | Msa0001750:intron |
GCCCTTGTTTCTGCTTGTAA+GGG | 0.488966 | 1_1:-3459581 | Msa0001750:CDS |
AATAGGCGGTGGATTCTCAT+TGG | 0.489381 | 1_1:-3459387 | Msa0001750:CDS |
GAATCATGTGAAAGGGCGTC+TGG | 0.489834 | 1_1:-3464306 | Msa0001750:CDS |
ATCTAGTAATCCAGTGTCGC+TGG | 0.491871 | 1_1:+3460823 | None:intergenic |
TGCTCATGCATTGCTAAGAC+TGG | 0.492006 | 1_1:-3461761 | Msa0001750:CDS |
CTCTTAAAGGTGACCCCTCA+CGG | 0.493295 | 1_1:-3462347 | Msa0001750:CDS |
TATCAGGCTATGATAGACTT+AGG | 0.493691 | 1_1:-3462195 | Msa0001750:CDS |
GTAGAAAACTTCGGAGAACT+AGG | 0.495280 | 1_1:+3458691 | None:intergenic |
CAGCAATGTTATTGCAGAGA+AGG | 0.495495 | 1_1:-3464037 | Msa0001750:CDS |
GAGGCAGCCTATTATTCTGC+TGG | 0.495786 | 1_1:-3464591 | Msa0001750:CDS |
GGATTACTAGATATGCTTGA+AGG | 0.497013 | 1_1:-3460812 | Msa0001750:CDS |
ATACAGTTTCCCGTAATGCC+CGG | 0.497593 | 1_1:+3464451 | None:intergenic |
GCTGTGTAAAACCTCAGAAC+TGG | 0.497828 | 1_1:+3460730 | None:intergenic |
GTTCTTGGACCAATTGGTGA+TGG | 0.498305 | 1_1:-3464990 | Msa0001750:CDS |
ACTTCTCCGATGGGCCAATC+GGG | 0.498551 | 1_1:-3461865 | Msa0001750:CDS |
TTGTATGCAGACTATCCATC+GGG | 0.499733 | 1_1:-3463756 | Msa0001750:CDS |
TACAATGCGGCTGGTGGGGA+AGG | 0.500968 | 1_1:-3468586 | Msa0001750:CDS |
TTCGTAAATTTCAGAGTGGC+GGG | 0.501286 | 1_1:+3469544 | None:intergenic |
GTCTATATATTCACACAGGA+TGG | 0.502227 | 1_1:-3459435 | Msa0001750:CDS |
TCCTGCAGAATTAGCTGCCA+TGG | 0.502902 | 1_1:-3463482 | Msa0001750:CDS |
CCCCGCCTTTATCCTGGTGA+TGG | 0.503361 | 1_1:-3459871 | Msa0001750:CDS |
ACTGAACTAGGGCTTGTTGA+AGG | 0.503774 | 1_1:+3463256 | None:intergenic |
CAGACTCCTTATAGTAGCTC+GGG | 0.504829 | 1_1:+3462959 | None:intergenic |
TCTATGGGAACTACCTGTAA+TGG | 0.507594 | 1_1:-3463830 | Msa0001750:CDS |
CTCAATGGAATCATGTGAAA+GGG | 0.510286 | 1_1:-3464313 | Msa0001750:CDS |
GCAAAATTGGCATCAACAGT+TGG | 0.510359 | 1_1:+3460665 | None:intergenic |
TATTCGCTACCTCAACCAAA+GGG | 0.512128 | 1_1:+3468641 | None:intergenic |
GATGTAGCGATTTCGATTCA+AGG | 0.512965 | 1_1:+3464829 | None:intergenic |
TGGTGGATTTAGCATGGGCC+AGG | 0.513192 | 1_1:-3463929 | Msa0001750:CDS |
AGTGTGGCATGTACCGATAA+GGG | 0.514553 | 1_1:-3465455 | Msa0001750:CDS |
GCATTACTGCCTTCAAGTTG+TGG | 0.514636 | 1_1:+3463976 | None:intergenic |
CACCCTTACAAGCAGAAACA+AGG | 0.515133 | 1_1:+3459579 | None:intergenic |
AATAAATAAGCTCATATATG+TGG | 0.515246 | 1_1:+3465405 | None:intergenic |
GACTGCAACAACTTCTCCGA+TGG | 0.515482 | 1_1:-3461875 | Msa0001750:CDS |
GGTTCCATTCTATATGGTGG+TGG | 0.515640 | 1_1:-3463622 | Msa0001750:CDS |
AGCTCTCTCCAGGGCTTCCA+CGG | 0.518172 | 1_1:+3462918 | None:intergenic |
GTACGTAAGTCTGCAGACTC+TGG | 0.518327 | 1_1:+3462826 | None:intergenic |
TCAGACTCCTTATAGTAGCT+CGG | 0.518482 | 1_1:+3462958 | None:intergenic |
ACTCGGAGTTCCAGCGACAC+TGG | 0.519773 | 1_1:-3460833 | Msa0001750:CDS |
CATTAGTAAGAGATTAAGAG+AGG | 0.520434 | 1_1:-3462986 | Msa0001750:CDS |
TCCATCACCAGGATAAAGGC+GGG | 0.521274 | 1_1:+3459870 | None:intergenic |
ATGCAAACAATAGATGGCTT+TGG | 0.521780 | 1_1:+3464867 | None:intergenic |
GATCAAGCTATTTCAGGAGG+TGG | 0.524721 | 1_1:-3459931 | Msa0001750:CDS |
TACTCATGGAAAATTCTGTC+GGG | 0.525023 | 1_1:+3462222 | None:intergenic |
AACCATAGAGTCCTCTCCTC+TGG | 0.527672 | 1_1:+3463671 | None:intergenic |
ATTGTCATCTTCAGCACCAT+GGG | 0.527861 | 1_1:-3464228 | Msa0001750:CDS |
ACAGCTAGGCTTGTGATGGC+TGG | 0.528884 | 1_1:+3464728 | None:intergenic |
CGGTCTCACCTTTGGAACCA+TGG | 0.530959 | 1_1:-3464658 | Msa0001750:CDS |
CGCAACATCTTCATCTCCAA+CGG | 0.531854 | 1_1:+3459607 | None:intergenic |
TGTAACGAAACTTCTGCAAA+TGG | 0.532012 | 1_1:+3465524 | None:intergenic |
GCTAATTCTGCAGGACTGTA+CGG | 0.532984 | 1_1:+3463490 | None:intergenic |
CTTACCTCTTCAGAAGGCAC+AGG | 0.534688 | 1_1:-3462481 | Msa0001750:CDS |
AAAGATACAATGCGGCTGGT+GGG | 0.534865 | 1_1:-3468591 | Msa0001750:CDS |
TACAGTTTCCCGTAATGCCC+GGG | 0.534887 | 1_1:+3464452 | None:intergenic |
ACGACATAGGTGCTCCCGAT+TGG | 0.535145 | 1_1:+3461851 | None:intergenic |
AAATCTTCTAAAACTGATCT+CGG | 0.535522 | 1_1:+3464141 | None:intergenic |
AACAGGTACGAGGAGTTCCC+GGG | 0.536433 | 1_1:-3464469 | Msa0001750:CDS |
TCAACTAGTTTGTTCTGAAG+AGG | 0.536462 | 1_1:-3463223 | Msa0001750:CDS |
TTCCTGAAATACGTAGGGCA+TGG | 0.536753 | 1_1:-3468543 | Msa0001750:CDS |
TCATCGGTGGTGGAATGTCG+TGG | 0.537196 | 1_1:-3469367 | Msa0001750:exon |
TCCATGGCAGCTAATTCTGC+AGG | 0.537400 | 1_1:+3463481 | None:intergenic |
TTCTAGTGGTACTTCGTGAG+TGG | 0.538447 | 1_1:-3459463 | Msa0001750:CDS |
GATTGTGAAGCAGATCCAAT+GGG | 0.538651 | 1_1:+3462309 | None:intergenic |
TGCAACAAATAGCGATGGGT+TGG | 0.538910 | 1_1:-3460864 | Msa0001750:CDS |
GATTACTAGATATGCTTGAA+GGG | 0.540149 | 1_1:-3460811 | Msa0001750:CDS |
GAAAGATACAATGCGGCTGG+TGG | 0.543305 | 1_1:-3468592 | Msa0001750:CDS |
AGAGAATTAACGGCGATGTA+GGG | 0.543668 | 1_1:+3469508 | None:intergenic |
ATGAAATGTTAACTGAACTA+GGG | 0.544395 | 1_1:+3463245 | None:intergenic |
GATGAAATGTTAACTGAACT+AGG | 0.545744 | 1_1:+3463244 | None:intergenic |
GAATGAAAGGTACCTCTCTA+GGG | 0.546021 | 1_1:+3469204 | None:intergenic |
TCACCTTGAGAAAGCTGCAC+TGG | 0.546075 | 1_1:-3459818 | Msa0001750:intron |
TCAAGCACAAGAACTGCTGC+TGG | 0.546532 | 1_1:-3463949 | Msa0001750:CDS |
CAACTAGTTTGTTCTGAAGA+GGG | 0.546779 | 1_1:-3463222 | Msa0001750:CDS |
ATTGGCATCAACAGTTGGAC+TGG | 0.547726 | 1_1:+3460670 | None:intergenic |
TTACACTGGTACAGATGGTA+GGG | 0.547983 | 1_1:-3463022 | Msa0001750:CDS |
ATACTCATGGAAAATTCTGT+CGG | 0.548225 | 1_1:+3462221 | None:intergenic |
AAGATGACAATCCTCCTCCT+TGG | 0.550107 | 1_1:+3464240 | None:intergenic |
AAGTGCTTGTTCTCTGACTG+TGG | 0.550328 | 1_1:+3462416 | None:intergenic |
TCCTGAAATACGTAGGGCAT+GGG | 0.550636 | 1_1:-3468542 | Msa0001750:CDS |
CATGCATTGCTAAGACTGGC+CGG | 0.551545 | 1_1:-3461757 | Msa0001750:CDS |
TAGCCTGATAAAGATACTCA+TGG | 0.553452 | 1_1:+3462208 | None:intergenic |
TTCTTGGACCAATTGGTGAT+GGG | 0.554076 | 1_1:-3464989 | Msa0001750:CDS |
GCAATATAGGCCCACCTCCA+TGG | 0.555455 | 1_1:+3463465 | None:intergenic |
ATTGAAAGATACAATGCGGC+TGG | 0.555495 | 1_1:-3468595 | Msa0001750:CDS |
CATGGGCCAGGTTGTTCAGG+AGG | 0.555690 | 1_1:-3463917 | Msa0001750:CDS |
GAACAAGCTATTTGTGCTGT+TGG | 0.556209 | 1_1:-3467813 | Msa0001750:CDS |
GTTGGAGTGTGCTGCTCTGG+AGG | 0.556678 | 1_1:-3465563 | Msa0001750:CDS |
AACATATACTGCCAAGGAGG+AGG | 0.556709 | 1_1:-3464251 | Msa0001750:CDS |
TAGCAAAGTACAGCATCTCC+AGG | 0.557530 | 1_1:+3460010 | None:intergenic |
TTAAGAAGGGCAATAGGTCA+GGG | 0.557890 | 1_1:+3462142 | None:intergenic |
TGGTGGTTATGAGAGCTCAA+TGG | 0.557994 | 1_1:-3464328 | Msa0001750:CDS |
CAAAATCGATCAAATGAATG+AGG | 0.558020 | 1_1:+3458891 | None:intergenic |
GCATATGGCTTCCAGTTCTG+AGG | 0.558452 | 1_1:-3460741 | Msa0001750:CDS |
GGTGCTCCCGATTGGCCCAT+CGG | 0.559421 | 1_1:+3461859 | None:intergenic |
GCTCTGTGCTAAAGAGACTT+GGG | 0.559721 | 1_1:-3459894 | Msa0001750:CDS |
TGTAGGAGAGATTAAATACA+GGG | 0.559992 | 1_1:-3459637 | Msa0001750:intron |
TCTTCCATAATAATAGGCGG+TGG | 0.560252 | 1_1:-3459398 | Msa0001750:CDS |
CGCTAGAAGGAGAGGTGGAT+AGG | 0.560743 | 1_1:+3464772 | None:intergenic |
CGAGCTGAGAAGAAACTTCA+CGG | 0.561694 | 1_1:+3469282 | None:intergenic |
AAGCTTCTAGAGATTCTTCG+AGG | 0.561996 | 1_1:+3469258 | None:intergenic |
ATTACACTGGTACAGATGGT+AGG | 0.562022 | 1_1:-3463023 | Msa0001750:CDS |
AAAGGAGACTCTCGCGCGGG+AGG | 0.562901 | 1_1:-3462872 | Msa0001750:CDS |
AACAATTTCCATCATGCCCA+TGG | 0.563013 | 1_1:+3464212 | None:intergenic |
GCTCAATGGAATCATGTGAA+AGG | 0.563015 | 1_1:-3464314 | Msa0001750:CDS |
GTAGCTGAAGTATCTGGTAG+AGG | 0.563574 | 1_1:+3464381 | None:intergenic |
ATAGCCTGTGCCTTCTGAAG+AGG | 0.563702 | 1_1:+3462477 | None:intergenic |
CTAACACCCCAAGGAGGAGA+AGG | 0.564873 | 1_1:+3464684 | None:intergenic |
GCCGGAAGGCCTTCTACTGA+CGG | 0.568282 | 1_1:-3461739 | Msa0001750:CDS |
AGAAAAGTATGCGTCACTGC+TGG | 0.568708 | 1_1:-3465353 | Msa0001750:CDS |
AGTATGGTAAGAACCTTGTT+CGG | 0.568865 | 1_1:-3463574 | Msa0001750:CDS |
AATCACAAAGATGCACATCA+TGG | 0.569157 | 1_1:-3464930 | Msa0001750:CDS |
AGGGTGACCGTCTTGCTACA+AGG | 0.569436 | 1_1:-3463203 | Msa0001750:CDS |
AAGAATGCAACAAATAGCGA+TGG | 0.570412 | 1_1:-3460869 | Msa0001750:CDS |
GGTCAGTGTCCTGAATATAG+TGG | 0.570424 | 1_1:-3467840 | Msa0001750:CDS |
TTTGGAATATGCACCGAACA+AGG | 0.571990 | 1_1:+3463561 | None:intergenic |
AATCTTAGCAACCCCTGTTG+AGG | 0.572946 | 1_1:-3467739 | Msa0001750:intron |
AGCACAAGAACTGCTGCTGG+TGG | 0.573089 | 1_1:-3463946 | Msa0001750:CDS |
AACTAGGCTCGAATGACGGC+CGG | 0.573397 | 1_1:+3458707 | None:intergenic |
TTGACTTGATTGGACGACAT+AGG | 0.573427 | 1_1:+3461838 | None:intergenic |
CTGCACTTGATCCAGCCTCT+CGG | 0.573634 | 1_1:-3462287 | Msa0001750:CDS |
AGCAAGAGCCATGGTTCCAA+AGG | 0.575322 | 1_1:+3464650 | None:intergenic |
ATTATACAATACCATCCGAT+GGG | 0.575885 | 1_1:-3465490 | Msa0001750:CDS |
GTGACAACCTTTAAACAGCT+AGG | 0.576071 | 1_1:+3464714 | None:intergenic |
AATACAGGGATTGAATCCGT+TGG | 0.576107 | 1_1:-3459623 | Msa0001750:CDS |
GTAACGGTACTTCCCTTGCA+TGG | 0.576252 | 1_1:+3465616 | None:intergenic |
CATCGGTGGTGGAATGTCGT+GGG | 0.576519 | 1_1:-3469366 | Msa0001750:exon |
ATGTAGCGATTTCGATTCAA+GGG | 0.576698 | 1_1:+3464830 | None:intergenic |
CAGTATTACACTGGTACAGA+TGG | 0.577792 | 1_1:-3463027 | Msa0001750:CDS |
AGGAGTGAAGGCATAGTTGG+AGG | 0.578653 | 1_1:+3464543 | None:intergenic |
CTTCAAGTTCTTTAAAGCCG+CGG | 0.578805 | 1_1:+3458928 | None:intergenic |
GCACAGGCTATCGACCCTGC+AGG | 0.579756 | 1_1:-3462465 | Msa0001750:CDS |
TCTGGCAAACTGTGGGCAAG+AGG | 0.580519 | 1_1:-3464288 | Msa0001750:CDS |
TTTCGTAAATTTCAGAGTGG+CGG | 0.581396 | 1_1:+3469543 | None:intergenic |
TTAAACAGCTAGGCTTGTGA+TGG | 0.581424 | 1_1:+3464724 | None:intergenic |
ATGGGTTGGTTAGTTCTACT+CGG | 0.582163 | 1_1:-3460850 | Msa0001750:CDS |
AAGGACTTGCATAGCCCCGA+TGG | 0.584420 | 1_1:+3463741 | None:intergenic |
CATGGACGTGTCATCTATGC+CGG | 0.585820 | 1_1:-3458726 | Msa0001750:three_prime_UTR |
GATTATACAATACCATCCGA+TGG | 0.585823 | 1_1:-3465491 | Msa0001750:CDS |
ACAAGGTTCTTACCATACTT+CGG | 0.586235 | 1_1:+3463578 | None:intergenic |
ATTAGTAAGAGATTAAGAGA+GGG | 0.587750 | 1_1:-3462985 | Msa0001750:CDS |
CAAGGTATTACGTGTTGAAG+CGG | 0.587807 | 1_1:-3461798 | Msa0001750:CDS |
GTTGTATGCAGACTATCCAT+CGG | 0.588221 | 1_1:-3463757 | Msa0001750:CDS |
TGCTGGTAGACCTCAAAATG+AGG | 0.588234 | 1_1:-3464631 | Msa0001750:CDS |
GTATTCGCTACCTCAACCAA+AGG | 0.588301 | 1_1:+3468640 | None:intergenic |
TGCTGTGACTATAGATGATG+AGG | 0.588314 | 1_1:-3462896 | Msa0001750:CDS |
CACGACCAGCAAGGAAAATG+CGG | 0.589351 | 1_1:+3465432 | None:intergenic |
AGAACCACCACCATATAGAA+TGG | 0.589649 | 1_1:+3463618 | None:intergenic |
AGGCACTTCATTTGAAAATG+GGG | 0.592406 | 1_1:-3463782 | Msa0001750:CDS |
CTTCCACAGAGCCAAACAGA+AGG | 0.592958 | 1_1:-3458957 | Msa0001750:CDS |
TGATCAATTGTTATCAAATG+GGG | 0.593219 | 1_1:-3459531 | Msa0001750:CDS |
GCTCAGCCTCCTGAACAACC+TGG | 0.595457 | 1_1:+3463911 | None:intergenic |
TTTATTCAACTGGCTCAGGA+TGG | 0.595573 | 1_1:-3465388 | Msa0001750:CDS |
TTACAAATTCTTCTTAGCCG+TGG | 0.596969 | 1_1:-3462935 | Msa0001750:CDS |
ATACCAGTGCAGCTTTCTCA+AGG | 0.598542 | 1_1:+3459815 | None:intergenic |
CTGTTTAAAACAAGGAGTGA+AGG | 0.598709 | 1_1:+3464531 | None:intergenic |
AATATGGAGTCTAATGGCGG+TGG | 0.599519 | 1_1:-3463538 | Msa0001750:CDS |
CCTCCTTGGGGTGTTAGTGG+CGG | 0.600152 | 1_1:-3464678 | Msa0001750:CDS |
TGTGTCACAGGTGAGGGCAA+TGG | 0.601138 | 1_1:-3463382 | Msa0001750:intron |
GCTGCTGGTGGATTTAGCAT+GGG | 0.601558 | 1_1:-3463934 | Msa0001750:CDS |
AAGATACAATGCGGCTGGTG+GGG | 0.602762 | 1_1:-3468590 | Msa0001750:CDS |
TATCTTTCAATAAGAACAGG+AGG | 0.602805 | 1_1:+3468607 | None:intergenic |
TAATAAGCGACCTCATGTAT+GGG | 0.605151 | 1_1:+3462102 | None:intergenic |
AGATTGTGAAGCAGATCCAA+TGG | 0.606543 | 1_1:+3462308 | None:intergenic |
GAATATTTCCTGAAATACGT+AGG | 0.606570 | 1_1:-3468549 | Msa0001750:CDS |
CATTATAAGCATCACCTGCA+GGG | 0.606825 | 1_1:+3462451 | None:intergenic |
TCCACAGAGCCAAACAGAAG+GGG | 0.607197 | 1_1:-3458955 | Msa0001750:CDS |
GAGCCAAATTCCTTCCGTGA+GGG | 0.608008 | 1_1:+3462333 | None:intergenic |
ATTGACCTCTGCTCAAGAGT+AGG | 0.608819 | 1_1:+3461712 | None:intergenic |
AATATTTCCTGAAATACGTA+GGG | 0.609500 | 1_1:-3468548 | Msa0001750:CDS |
AGCCAAATTCCTTCCGTGAG+GGG | 0.610828 | 1_1:+3462334 | None:intergenic |
TTCCACAGAGCCAAACAGAA+GGG | 0.611280 | 1_1:-3458956 | Msa0001750:CDS |
TAAAGGTGACCCCTCACGGA+AGG | 0.611952 | 1_1:-3462343 | Msa0001750:CDS |
AGGTCTACCAGCAAGAGCCA+TGG | 0.612188 | 1_1:+3464641 | None:intergenic |
AGTTTGCTTACCTCTTCAGA+AGG | 0.615018 | 1_1:-3462487 | Msa0001750:CDS |
CATTGCTAAGACTGGCCGGA+AGG | 0.617769 | 1_1:-3461753 | Msa0001750:CDS |
TCTAGTGGTACTTCGTGAGT+GGG | 0.617984 | 1_1:-3459462 | Msa0001750:CDS |
TCCTAGATTACCTGATGGTG+AGG | 0.620705 | 1_1:+3464491 | None:intergenic |
ACAGGTATATGACTGAAGTA+CGG | 0.621524 | 1_1:-3458989 | Msa0001750:intron |
CAGGCTTCCGCTAGAAGGAG+AGG | 0.622102 | 1_1:+3464764 | None:intergenic |
ATTCGTGACGTCACCAACGC+TGG | 0.622785 | 1_1:-3469329 | Msa0001750:CDS |
ACTTGTCATCGTAACCCCAT+CGG | 0.622842 | 1_1:+3465475 | None:intergenic |
CAACCCAACATATACTGCCA+AGG | 0.623440 | 1_1:-3464257 | Msa0001750:CDS |
ACTGCAACAACTTCTCCGAT+GGG | 0.623712 | 1_1:-3461874 | Msa0001750:CDS |
ATTACAGGTAGTTCCCATAG+AGG | 0.624222 | 1_1:+3463832 | None:intergenic |
TCGAATCCCTGTTTAAAACA+AGG | 0.626469 | 1_1:+3464523 | None:intergenic |
TCTATATATTCACACAGGAT+GGG | 0.626575 | 1_1:-3459434 | Msa0001750:CDS |
ACATTGCTCCAGTATTACAC+TGG | 0.627645 | 1_1:-3463036 | Msa0001750:intron |
CGGCATAGATGACACGTCCA+TGG | 0.628874 | 1_1:+3458727 | None:intergenic |
AGAATGCAACAAATAGCGAT+GGG | 0.629921 | 1_1:-3460868 | Msa0001750:CDS |
GTTTAAAGGTTGTCACAACA+CGG | 0.631503 | 1_1:-3464707 | Msa0001750:CDS |
TTCCATCACCAGGATAAAGG+CGG | 0.632649 | 1_1:+3459869 | None:intergenic |
TTCGCTACCTCAACCAAAGG+GGG | 0.634180 | 1_1:+3468643 | None:intergenic |
AGAGACAGATACTGTATGCA+CGG | 0.635091 | 1_1:-3465040 | Msa0001750:CDS |
ATAGATCAAGCTATTTCAGG+AGG | 0.638506 | 1_1:-3459934 | Msa0001750:CDS |
GATTGTCATCTTCAGCACCA+TGG | 0.639774 | 1_1:-3464229 | Msa0001750:CDS |
TAGCATTGTCAGAGAGACAT+GGG | 0.640474 | 1_1:-3459965 | Msa0001750:CDS |
AGTGGTTCCATTCTATATGG+TGG | 0.641876 | 1_1:-3463625 | Msa0001750:CDS |
GCAGGATTAGGAGATGTAAG+TGG | 0.642995 | 1_1:-3463643 | Msa0001750:CDS |
GCTTCCGCTAGAAGGAGAGG+TGG | 0.643058 | 1_1:+3464767 | None:intergenic |
GAGCCGCAAATAAAAGGCAA+AGG | 0.643744 | 1_1:-3463516 | Msa0001750:CDS |
AAAGGGCGTCTGGCAAACTG+TGG | 0.645972 | 1_1:-3464296 | Msa0001750:CDS |
ATAAGCCAAATTGTTCAGCT+GGG | 0.646096 | 1_1:-3462255 | Msa0001750:CDS |
CCATCACCAGGATAAAGGCG+GGG | 0.648462 | 1_1:+3459871 | None:intergenic |
ACTGACAACGAGACCAGCGT+TGG | 0.648890 | 1_1:+3469316 | None:intergenic |
GTCATCGTAACCCCATCGGA+TGG | 0.648967 | 1_1:+3465479 | None:intergenic |
CGTAATCTAAGATTTGGGGA+TGG | 0.649285 | 1_1:+3459500 | None:intergenic |
GTAGCATTGTCAGAGAGACA+TGG | 0.650313 | 1_1:-3459966 | Msa0001750:CDS |
TTGGAGGTGATGCATCCGAA+AGG | 0.650794 | 1_1:+3464559 | None:intergenic |
TATTATTATGGAAGAACCAG+TGG | 0.650914 | 1_1:+3459406 | None:intergenic |
CATGGAGGTAGACAATCAAG+TGG | 0.653447 | 1_1:-3464912 | Msa0001750:CDS |
GCTTATATCTGCTCTAATGG+AGG | 0.653828 | 1_1:-3463181 | Msa0001750:intron |
TTATTCTACTCACCCTAGAG+AGG | 0.654466 | 1_1:-3469216 | Msa0001750:intron |
TGTGGCCATCACGACCAGCA+AGG | 0.655087 | 1_1:+3465423 | None:intergenic |
GGTCTTGCAAAATCAAAGCA+CGG | 0.657151 | 1_1:-3467792 | Msa0001750:CDS |
GGTATTGTATAATCTGGCAA+CGG | 0.658098 | 1_1:+3465500 | None:intergenic |
TGCAGAATTAGCTGCCATGG+AGG | 0.658293 | 1_1:-3463479 | Msa0001750:intron |
GATGCTGAGATCTGTTCTAG+TGG | 0.658820 | 1_1:-3459477 | Msa0001750:CDS |
ACACGGCCTTCTCCTCCTTG+GGG | 0.659201 | 1_1:-3464690 | Msa0001750:CDS |
AAGGGCGTCTGGCAAACTGT+GGG | 0.660618 | 1_1:-3464295 | Msa0001750:CDS |
AGGAAAAGGAGACTCTCGCG+CGG | 0.660690 | 1_1:-3462876 | Msa0001750:CDS |
GGAAAAGGAGACTCTCGCGC+GGG | 0.661993 | 1_1:-3462875 | Msa0001750:CDS |
GAACGTACAGTTGCTAGCCA+AGG | 0.663076 | 1_1:-3459365 | Msa0001750:CDS |
GTGTCCTGAATATAGTGGCG+AGG | 0.666227 | 1_1:-3467835 | Msa0001750:CDS |
TACACTGGTACAGATGGTAG+GGG | 0.666518 | 1_1:-3463021 | Msa0001750:CDS |
AGTCACAGCAGCTCTCTCCA+GGG | 0.666999 | 1_1:+3462909 | None:intergenic |
AGACCGCCACTAACACCCCA+AGG | 0.667315 | 1_1:+3464675 | None:intergenic |
ATCTGGTAGAGGTAAAACAT+CGG | 0.667887 | 1_1:+3464392 | None:intergenic |
TGGGGTTACGATGACAAGTG+TGG | 0.668689 | 1_1:-3465471 | Msa0001750:CDS |
GGGTTTCGTAAATTTCAGAG+TGG | 0.669536 | 1_1:+3469540 | None:intergenic |
GGATCTCTCATTGAAAGTCG+AGG | 0.671076 | 1_1:-3464610 | Msa0001750:CDS |
TAAGATCTAGAAGGAACCAG+AGG | 0.671121 | 1_1:-3463687 | Msa0001750:CDS |
CCTGTTCCTAGATTACCTGA+TGG | 0.672525 | 1_1:+3464486 | None:intergenic |
ACCCTTACAAGCAGAAACAA+GGG | 0.674854 | 1_1:+3459580 | None:intergenic |
CTATCCACCTCTCCTTCTAG+CGG | 0.675230 | 1_1:-3464771 | Msa0001750:CDS |
CCCAACATATACTGCCAAGG+AGG | 0.676631 | 1_1:-3464254 | Msa0001750:CDS |
ATATAAGCCTTGTAGCAAGA+CGG | 0.677301 | 1_1:+3463196 | None:intergenic |
TGTTCCCTTTAAACTCTGGG+AGG | 0.678115 | 1_1:-3460567 | Msa0001750:intron |
TCTAGAAGGAACCAGAGGAG+AGG | 0.679190 | 1_1:-3463682 | Msa0001750:CDS |
CAAACAGAAGGGGTTTACCG+CGG | 0.679346 | 1_1:-3458945 | Msa0001750:CDS |
GAGTTCCTACTCTTGAGCAG+AGG | 0.686075 | 1_1:-3461717 | Msa0001750:intron |
CTATGTCTATATATTCACAC+AGG | 0.687534 | 1_1:-3459439 | Msa0001750:CDS |
GGAGAACTAGGCTCGAATGA+CGG | 0.689124 | 1_1:+3458703 | None:intergenic |
GGTTGAGGTAGCGAATACAT+GGG | 0.689973 | 1_1:-3468635 | Msa0001750:CDS |
AATGAATTGTTGGAGTATGG+AGG | 0.690712 | 1_1:-3462165 | Msa0001750:CDS |
GTAATCTAGGAACAGGTACG+AGG | 0.690748 | 1_1:-3464479 | Msa0001750:CDS |
ACCACTTATCAAAACGCCAG+AGG | 0.691648 | 1_1:+3468497 | None:intergenic |
TGGTCGTACACCCATACATG+AGG | 0.697547 | 1_1:-3462112 | Msa0001750:intron |
CATCCGTAATCTAAGATTTG+GGG | 0.697597 | 1_1:+3459496 | None:intergenic |
AGAGCCAAATTCCTTCCGTG+AGG | 0.698450 | 1_1:+3462332 | None:intergenic |
TCTTATTGAAAGATACAATG+CGG | 0.704503 | 1_1:-3468599 | Msa0001750:CDS |
GGTTCTTCCATAATAATAGG+CGG | 0.706852 | 1_1:-3459401 | Msa0001750:CDS |
ATTCGCTACCTCAACCAAAG+GGG | 0.712229 | 1_1:+3468642 | None:intergenic |
CACAAAGATGCACATCATGG+AGG | 0.714834 | 1_1:-3464927 | Msa0001750:CDS |
ACGGTACTTCCCTTGCATGG+AGG | 0.725360 | 1_1:+3465619 | None:intergenic |
AGATGGCCAATACCTCAACA+GGG | 0.726892 | 1_1:+3467727 | None:intergenic |
GGTATATGACTGAAGTACGG+AGG | 0.731109 | 1_1:-3458986 | Msa0001750:CDS |
TTATACAATACCATCCGATG+GGG | 0.731321 | 1_1:-3465489 | Msa0001750:CDS |
GATGGCCAATACCTCAACAG+GGG | 0.742049 | 1_1:+3467728 | None:intergenic |
CCGCCACTAACACCCCAAGG+AGG | 0.760733 | 1_1:+3464678 | None:intergenic |
TGTATGCAGACTATCCATCG+GGG | 0.803566 | 1_1:-3463755 | Msa0001750:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATTGAATCTAAAAAA+CGG | + | chr1_1:3459160-3459179 | None:intergenic | 10.0% |
!! | AATAATATTATTAGGTTATA+GGG | - | chr1_1:3459317-3459336 | Msa0001750:intron | 10.0% |
!!! | TTTTATCTAGAAATTTTTAT+GGG | + | chr1_1:3460229-3460248 | None:intergenic | 10.0% |
!!! | ATTTTATCTAGAAATTTTTA+TGG | + | chr1_1:3460230-3460249 | None:intergenic | 10.0% |
!! | GATCATTAATTTAAATAATT+AGG | - | chr1_1:3460327-3460346 | Msa0001750:intron | 10.0% |
!! | AATAAATTTATGAAAAAATC+AGG | - | chr1_1:3462341-3462360 | Msa0001750:CDS | 10.0% |
!! | ATAAATTTATGAAAAAATCA+GGG | - | chr1_1:3462342-3462361 | Msa0001750:CDS | 10.0% |
!!! | GATGTTATTTTTAAAATTAT+TGG | - | chr1_1:3464894-3464913 | Msa0001750:CDS | 10.0% |
!!! | TATTATTAGTAATTTGTAAT+TGG | + | chr1_1:3465686-3465705 | None:intergenic | 10.0% |
!!! | ATTAATTTTCATGTTTTATA+TGG | + | chr1_1:3467135-3467154 | None:intergenic | 10.0% |
!! | TATTCATATTGTTAATTATT+AGG | - | chr1_1:3469036-3469055 | Msa0001750:intron | 10.0% |
!! | ATTCATATTGTTAATTATTA+GGG | - | chr1_1:3469037-3469056 | Msa0001750:intron | 10.0% |
!! | TTCATATTGTTAATTATTAA+TGG | - | chr1_1:3469110-3469129 | Msa0001750:intron | 10.0% |
!! | AGTGATACAATAATATTATT+AGG | - | chr1_1:3459309-3459328 | Msa0001750:intron | 15.0% |
!! | CAATAATATTATTAGGTTAT+AGG | - | chr1_1:3459316-3459335 | Msa0001750:intron | 15.0% |
!!! | TTTATCTAGAAATTTTTATG+GGG | + | chr1_1:3460228-3460247 | None:intergenic | 15.0% |
!! | TAATTTAAATAATTAGGTGA+AGG | - | chr1_1:3460333-3460352 | Msa0001750:intron | 15.0% |
!!! | TATTTGTTAAAAAAAGTGTT+TGG | + | chr1_1:3460969-3460988 | None:intergenic | 15.0% |
!!! | TAATTCTATTAACTTGTAAA+AGG | + | chr1_1:3462188-3462207 | None:intergenic | 15.0% |
!! | GTTAATAGAATTAATAGTAT+AGG | - | chr1_1:3462195-3462214 | Msa0001750:CDS | 15.0% |
!! | AATTAACTGATAAAAAGAAT+GGG | + | chr1_1:3462736-3462755 | None:intergenic | 15.0% |
!! | AAATTAACTGATAAAAAGAA+TGG | + | chr1_1:3462737-3462756 | None:intergenic | 15.0% |
!!! | TTTTATCAGTTAATTTTAGT+TGG | - | chr1_1:3462741-3462760 | Msa0001750:intron | 15.0% |
!! | TGAAGATAAAAATTATTTCA+TGG | + | chr1_1:3465187-3465206 | None:intergenic | 15.0% |
!!! | GTTTTTTGTTTTGTAAAATT+AGG | - | chr1_1:3467397-3467416 | Msa0001750:intron | 15.0% |
!!! | GTTTTTTAAGATAGAAAAAT+AGG | - | chr1_1:3468007-3468026 | Msa0001750:intron | 15.0% |
!! | ATTTAATATAATGGTGTATT+GGG | + | chr1_1:3469227-3469246 | None:intergenic | 15.0% |
!! | AATTTAATATAATGGTGTAT+TGG | + | chr1_1:3469228-3469247 | None:intergenic | 15.0% |
!! | AATCAGCAAATTTAATATAA+TGG | + | chr1_1:3469236-3469255 | None:intergenic | 15.0% |
!!! | TTAGTTTTTATTTTCATGAC+CGG | - | chr1_1:3458747-3458766 | Msa0001750:three_prime_UTR | 20.0% |
!! | AAATCAAAAGTAAAATCACA+TGG | + | chr1_1:3459186-3459205 | None:intergenic | 20.0% |
!! | TCTAACTTCATTAAGTTTAA+AGG | - | chr1_1:3459869-3459888 | Msa0001750:CDS | 20.0% |
!! | TGTTTCATAAATTCTTACTT+GGG | - | chr1_1:3460082-3460101 | Msa0001750:intron | 20.0% |
!!! | TTATCTAGAAATTTTTATGG+GGG | + | chr1_1:3460227-3460246 | None:intergenic | 20.0% |
!! | GAAGTGAATTAAAAAATAGA+TGG | + | chr1_1:3460615-3460634 | None:intergenic | 20.0% |
!!! | AATTTTCATCTTTTCAATTC+CGG | - | chr1_1:3461000-3461019 | Msa0001750:intron | 20.0% |
!! | CTCAATATAGAAATCTAATA+TGG | - | chr1_1:3461165-3461184 | Msa0001750:intron | 20.0% |
!! | AACTTGATATTAGGATAATA+TGG | + | chr1_1:3461223-3461242 | None:intergenic | 20.0% |
!!! | TAAAGGTAATTAGTCTTTTT+TGG | - | chr1_1:3461834-3461853 | Msa0001750:CDS | 20.0% |
!! | TGATAAAGATCATAAGTAAT+TGG | - | chr1_1:3462062-3462081 | Msa0001750:intron | 20.0% |
!! | GTAAATAGAAGGAAATAATT+AGG | - | chr1_1:3462364-3462383 | Msa0001750:CDS | 20.0% |
!! | CTAATATTGTCAAATTAACA+AGG | - | chr1_1:3462427-3462446 | Msa0001750:CDS | 20.0% |
!! | ACACAAGTATTAAAAATCTT+GGG | + | chr1_1:3462549-3462568 | None:intergenic | 20.0% |
!! | ATTAACTGATAAAAAGAATG+GGG | + | chr1_1:3462735-3462754 | None:intergenic | 20.0% |
!! | AATAAATAAGCTCATATATG+TGG | + | chr1_1:3462920-3462939 | None:intergenic | 20.0% |
!!! | ATACCAAATGTATTCAATTT+TGG | - | chr1_1:3463221-3463240 | Msa0001750:CDS | 20.0% |
!! | AAAAATTCTTAAGATCTAGA+AGG | - | chr1_1:3464626-3464645 | Msa0001750:CDS | 20.0% |
!!! | TGTATCATCATTAGTTTTTA+TGG | - | chr1_1:3465744-3465763 | Msa0001750:intron | 20.0% |
!! | TAACAAATTATTAGAGAGAA+AGG | + | chr1_1:3466248-3466267 | None:intergenic | 20.0% |
!!! | TCTCTCTAATAATTTGTTAA+TGG | - | chr1_1:3466249-3466268 | Msa0001750:intron | 20.0% |
!! | TAATTGTATATTAACACACT+GGG | + | chr1_1:3466947-3466966 | None:intergenic | 20.0% |
!! | ATAATTGTATATTAACACAC+TGG | + | chr1_1:3466948-3466967 | None:intergenic | 20.0% |
!! | TATGATCAATTGTTATCAAA+TGG | - | chr1_1:3468789-3468808 | Msa0001750:intron | 20.0% |
!! | ATGATCAATTGTTATCAAAT+GGG | - | chr1_1:3468790-3468809 | Msa0001750:intron | 20.0% |
!! | AAGTTTCTAATGTTTCATAT+TGG | - | chr1_1:3469522-3469541 | Msa0001750:five_prime_UTR | 20.0% |
! | TTTAAGAGTGAGAGAATTAA+CGG | + | chr1_1:3458827-3458846 | None:intergenic | 25.0% |
! | TGAAATTGCTATATGTAATC+TGG | - | chr1_1:3459258-3459277 | Msa0001750:intron | 25.0% |
! | GAAATTGCTATATGTAATCT+GGG | - | chr1_1:3459259-3459278 | Msa0001750:intron | 25.0% |
! | GAAAACAGCTTATACAAAAA+CGG | + | chr1_1:3459457-3459476 | None:intergenic | 25.0% |
! | GCTTATGAAAATAAGCTAAA+AGG | - | chr1_1:3459494-3459513 | Msa0001750:CDS | 25.0% |
! | TTGTATCTTTCAATAAGAAC+AGG | + | chr1_1:3459721-3459740 | None:intergenic | 25.0% |
! | TCTTATTGAAAGATACAATG+CGG | - | chr1_1:3459723-3459742 | Msa0001750:intron | 25.0% |
! | AATATTTCCTGAAATACGTA+GGG | - | chr1_1:3459774-3459793 | Msa0001750:intron | 25.0% |
! | AATTTATGAAACAGTCTATG+GGG | + | chr1_1:3460075-3460094 | None:intergenic | 25.0% |
! | GAATTTATGAAACAGTCTAT+GGG | + | chr1_1:3460076-3460095 | None:intergenic | 25.0% |
! | AGAATTTATGAAACAGTCTA+TGG | + | chr1_1:3460077-3460096 | None:intergenic | 25.0% |
! | CTGTTTCATAAATTCTTACT+TGG | - | chr1_1:3460081-3460100 | Msa0001750:intron | 25.0% |
!! | TATCTAGAAATTTTTATGGG+GGG | + | chr1_1:3460226-3460245 | None:intergenic | 25.0% |
! | TTTCTGTTATATAATTGCTC+TGG | - | chr1_1:3460298-3460317 | Msa0001750:intron | 25.0% |
!! | CATTAGCACGTTTAAAATAT+TGG | + | chr1_1:3460427-3460446 | None:intergenic | 25.0% |
! | TTGCTAAGATTAAAAGATAC+TGG | + | chr1_1:3460574-3460593 | None:intergenic | 25.0% |
!! | CATTTGTGTTAGTTTGAATT+AGG | - | chr1_1:3460724-3460743 | Msa0001750:CDS | 25.0% |
! | GTTGAGAAAAAAATATTCCT+GGG | - | chr1_1:3460791-3460810 | Msa0001750:CDS | 25.0% |
! | AAAAATATTCCTGGGTATAA+AGG | - | chr1_1:3460799-3460818 | Msa0001750:CDS | 25.0% |
! | AAATCTATGCAGAATATCAT+GGG | + | chr1_1:3460892-3460911 | None:intergenic | 25.0% |
! | AAAATCTATGCAGAATATCA+TGG | + | chr1_1:3460893-3460912 | None:intergenic | 25.0% |
!!! | ACTTTTTTTAACAAATACCC+AGG | - | chr1_1:3460972-3460991 | Msa0001750:intron | 25.0% |
! | AAGATGAAAATTTGATTCCT+GGG | + | chr1_1:3460992-3461011 | None:intergenic | 25.0% |
! | AAAGATGAAAATTTGATTCC+TGG | + | chr1_1:3460993-3461012 | None:intergenic | 25.0% |
!! | ATTTTCATCTTTTCAATTCC+GGG | - | chr1_1:3461001-3461020 | Msa0001750:intron | 25.0% |
!!! | TTTTTCAATGTGAGACTTTA+GGG | + | chr1_1:3461072-3461091 | None:intergenic | 25.0% |
!!! | TTTTTTCAATGTGAGACTTT+AGG | + | chr1_1:3461073-3461092 | None:intergenic | 25.0% |
! | TCTGAAGAGTTTATAAAAAG+TGG | - | chr1_1:3461100-3461119 | Msa0001750:intron | 25.0% |
! | ATAAATTGTCCTTACAAAAC+CGG | + | chr1_1:3461144-3461163 | None:intergenic | 25.0% |
! | ATTAGATCATCATAATGATC+AGG | - | chr1_1:3461189-3461208 | Msa0001750:intron | 25.0% |
! | TTAGATCATCATAATGATCA+GGG | - | chr1_1:3461190-3461209 | Msa0001750:intron | 25.0% |
! | TTGATATTAGGATAATATGG+TGG | + | chr1_1:3461220-3461239 | None:intergenic | 25.0% |
! | ACACTATTGAACTTGATATT+AGG | + | chr1_1:3461232-3461251 | None:intergenic | 25.0% |
! | AATATCAAGTTCAATAGTGT+TGG | - | chr1_1:3461232-3461251 | Msa0001750:intron | 25.0% |
! | ATATCAAGTTCAATAGTGTT+GGG | - | chr1_1:3461233-3461252 | Msa0001750:intron | 25.0% |
! | ACTCAATATAGAAACCTAAT+AGG | - | chr1_1:3461374-3461393 | Msa0001750:intron | 25.0% |
! | CTATCATTGTTTAGTAGAAA+TGG | + | chr1_1:3461403-3461422 | None:intergenic | 25.0% |
! | TCTTATAATTGAATGCTATC+TGG | - | chr1_1:3461486-3461505 | Msa0001750:intron | 25.0% |
! | AAAATGTTACAATGGATAAG+TGG | - | chr1_1:3461575-3461594 | Msa0001750:intron | 25.0% |
! | TAGAATAGTCCAATAATTAG+AGG | - | chr1_1:3461764-3461783 | Msa0001750:CDS | 25.0% |
! | TTATAACTCTCTTACTAGAT+TGG | + | chr1_1:3461817-3461836 | None:intergenic | 25.0% |
! | ATCTAGTAAGAGAGTTATAA+AGG | - | chr1_1:3461817-3461836 | Msa0001750:CDS | 25.0% |
!! | ATATATCAACCTGTTTTATG+TGG | - | chr1_1:3461959-3461978 | Msa0001750:intron | 25.0% |
! | ATGATCTTTATCAATGCTAT+TGG | + | chr1_1:3462055-3462074 | None:intergenic | 25.0% |
! | AAAAAATCAGGGTAAATAGA+AGG | - | chr1_1:3462353-3462372 | Msa0001750:CDS | 25.0% |
! | CACACAAGTATTAAAAATCT+TGG | + | chr1_1:3462550-3462569 | None:intergenic | 25.0% |
!! | CAAGATTTTTAATACTTGTG+TGG | - | chr1_1:3462548-3462567 | Msa0001750:intron | 25.0% |
! | TATGAGCTTATTTATTCAAC+TGG | - | chr1_1:3462924-3462943 | Msa0001750:CDS | 25.0% |
! | AAGACAAATTACTAAGGAAT+TGG | + | chr1_1:3463179-3463198 | None:intergenic | 25.0% |
!! | TCTTCAGCAATTTTCTTTAA+TGG | + | chr1_1:3463359-3463378 | None:intergenic | 25.0% |
! | TAAAGAAAATTGCTGAAGAA+AGG | - | chr1_1:3463360-3463379 | Msa0001750:CDS | 25.0% |
!!! | TGATGGAAATTGTTTTTAAC+AGG | - | chr1_1:3464119-3464138 | Msa0001750:CDS | 25.0% |
!!! | AAATCTTCTAAAACTGATCT+CGG | + | chr1_1:3464184-3464203 | None:intergenic | 25.0% |
! | ATGAAATGTTAACTGAACTA+GGG | + | chr1_1:3465080-3465099 | None:intergenic | 25.0% |
! | ATTAGTAAGAGATTAAGAGA+GGG | - | chr1_1:3465337-3465356 | Msa0001750:CDS | 25.0% |
!!! | AGGTATATATTTTTGTTACC+TGG | - | chr1_1:3465544-3465563 | Msa0001750:CDS | 25.0% |
!! | ATATTCAGTTTTCACAGAAA+TGG | + | chr1_1:3465577-3465596 | None:intergenic | 25.0% |
! | AACCACTAATGTGTTTATAT+AGG | - | chr1_1:3465622-3465641 | Msa0001750:CDS | 25.0% |
!! | TCATTTCTTTTGTATCTCTT+TGG | - | chr1_1:3466652-3466671 | Msa0001750:intron | 25.0% |
!! | AAACCCATCTAAAATATAAG+TGG | + | chr1_1:3467056-3467075 | None:intergenic | 25.0% |
! | TTGAAAACTAAACGTACATA+AGG | + | chr1_1:3467173-3467192 | None:intergenic | 25.0% |
! | GTTTCAGATAAAAATCAAAG+AGG | - | chr1_1:3467551-3467570 | Msa0001750:intron | 25.0% |
!! | TAAACCATTTTGAACAGAAT+TGG | + | chr1_1:3467622-3467641 | None:intergenic | 25.0% |
!!! | TGATAATGAACAACTTTTAG+AGG | - | chr1_1:3467870-3467889 | Msa0001750:intron | 25.0% |
!!! | TTTCTAAGACATGTATTGTT+TGG | - | chr1_1:3467951-3467970 | Msa0001750:intron | 25.0% |
! | GATAGAAAAATAGGAATTTG+AGG | - | chr1_1:3468016-3468035 | Msa0001750:intron | 25.0% |
! | TGTCACAAAAAAGAAAGAAA+TGG | + | chr1_1:3468097-3468116 | None:intergenic | 25.0% |
! | CAAACTTATCGAACTAATAA+CGG | - | chr1_1:3468258-3468277 | Msa0001750:intron | 25.0% |
!! | ATGAATTCATGTCTTTTTGT+AGG | - | chr1_1:3468668-3468687 | Msa0001750:intron | 25.0% |
! | TGATCAATTGTTATCAAATG+GGG | - | chr1_1:3468791-3468810 | Msa0001750:intron | 25.0% |
!!! | ATGGTTGACATTGTTTTTTT+TGG | - | chr1_1:3469129-3469148 | Msa0001750:intron | 25.0% |
!!! | CCACAACTAAAATTTTTTGT+TGG | + | chr1_1:3469192-3469211 | None:intergenic | 25.0% |
!!! | CCAACAAAAAATTTTAGTTG+TGG | - | chr1_1:3469189-3469208 | Msa0001750:intron | 25.0% |
! | TCTGAATAACATTTACTTAC+AGG | - | chr1_1:3469315-3469334 | Msa0001750:CDS | 25.0% |
! | TTTCTAATGTTTCATATTGG+AGG | - | chr1_1:3469525-3469544 | Msa0001750:five_prime_UTR | 25.0% |
TATCTTTCAATAAGAACAGG+AGG | + | chr1_1:3459718-3459737 | None:intergenic | 30.0% | |
GAATATTTCCTGAAATACGT+AGG | - | chr1_1:3459773-3459792 | Msa0001750:intron | 30.0% | |
AGGCAACTTAAACAAAACAT+AGG | + | chr1_1:3459911-3459930 | None:intergenic | 30.0% | |
ACTGCCTAACAAGAAAATAT+AGG | + | chr1_1:3459934-3459953 | None:intergenic | 30.0% | |
! | AATGGGGTATTAATAAAGAG+GGG | + | chr1_1:3459990-3460009 | None:intergenic | 30.0% |
! | CAATGGGGTATTAATAAAGA+GGG | + | chr1_1:3459991-3460010 | None:intergenic | 30.0% |
ATACAGAATCTTAACCAATG+GGG | + | chr1_1:3460006-3460025 | None:intergenic | 30.0% | |
CATACAGAATCTTAACCAAT+GGG | + | chr1_1:3460007-3460026 | None:intergenic | 30.0% | |
ACATACAGAATCTTAACCAA+TGG | + | chr1_1:3460008-3460027 | None:intergenic | 30.0% | |
CAGAACATTGAAAACGTAAA+AGG | + | chr1_1:3460033-3460052 | None:intergenic | 30.0% | |
AATAGCTTAAACTGTTACAG+AGG | + | chr1_1:3460122-3460141 | None:intergenic | 30.0% | |
ATTGTTGTATCATTGTTGCA+AGG | - | chr1_1:3460152-3460171 | Msa0001750:intron | 30.0% | |
TTGTTGTATCATTGTTGCAA+GGG | - | chr1_1:3460153-3460172 | Msa0001750:intron | 30.0% | |
TGACTAAGCATTTAAGCATT+TGG | - | chr1_1:3460182-3460201 | Msa0001750:intron | 30.0% | |
! | AGGTGAAGGAATAATGTTTT+AGG | - | chr1_1:3460347-3460366 | Msa0001750:intron | 30.0% |
!!! | CATTTTAGAACACAATTCGT+TGG | + | chr1_1:3460637-3460656 | None:intergenic | 30.0% |
GTTTGAATTAGGAACTAACA+TGG | - | chr1_1:3460735-3460754 | Msa0001750:CDS | 30.0% | |
AATTAGGAACTAACATGGTT+AGG | - | chr1_1:3460740-3460759 | Msa0001750:CDS | 30.0% | |
ATTAGGAACTAACATGGTTA+GGG | - | chr1_1:3460741-3460760 | Msa0001750:CDS | 30.0% | |
!! | TTATACCCATGTTTGTTATG+AGG | - | chr1_1:3460769-3460788 | Msa0001750:CDS | 30.0% |
GGTTGAGAAAAAAATATTCC+TGG | - | chr1_1:3460790-3460809 | Msa0001750:CDS | 30.0% | |
! | ATGGGAATAATGGAAGTTAT+GGG | + | chr1_1:3460846-3460865 | None:intergenic | 30.0% |
! | TTTTCAATGTGAGACTTTAG+GGG | + | chr1_1:3461071-3461090 | None:intergenic | 30.0% |
! | CTATTTTCAATGTGAGACTT+AGG | + | chr1_1:3461282-3461301 | None:intergenic | 30.0% |
AAAATCAGCTTGTAATGTGA+GGG | + | chr1_1:3461339-3461358 | None:intergenic | 30.0% | |
!! | CATTACAAGCTGATTTTGTA+AGG | - | chr1_1:3461342-3461361 | Msa0001750:intron | 30.0% |
GTATGAAATTGAATTGTGAG+TGG | - | chr1_1:3461515-3461534 | Msa0001750:intron | 30.0% | |
TGTCACAGAAAATGTTACAA+TGG | - | chr1_1:3461567-3461586 | Msa0001750:intron | 30.0% | |
ACAACCATCAGTGAATAATT+TGG | - | chr1_1:3461633-3461652 | Msa0001750:intron | 30.0% | |
TACACCAAATTATTCACTGA+TGG | + | chr1_1:3461640-3461659 | None:intergenic | 30.0% | |
GAAAGAAAACCACATAAAAC+AGG | + | chr1_1:3461971-3461990 | None:intergenic | 30.0% | |
! | TTTATGTGGTTTTCTTTCTG+TGG | - | chr1_1:3461973-3461992 | Msa0001750:intron | 30.0% |
! | TACCAAGTACACTTTAGAAA+GGG | - | chr1_1:3462218-3462237 | Msa0001750:CDS | 30.0% |
! | TAAGGCTACTATTTTCTCTT+TGG | - | chr1_1:3462260-3462279 | Msa0001750:CDS | 30.0% |
! | AAGGCTACTATTTTCTCTTT+GGG | - | chr1_1:3462261-3462280 | Msa0001750:CDS | 30.0% |
TCTCTACTCTATTTATCTTC+TGG | + | chr1_1:3462405-3462424 | None:intergenic | 30.0% | |
! | TCCTTTTATCCACCAATTAA+AGG | - | chr1_1:3462630-3462649 | Msa0001750:intron | 30.0% |
! | CCTTTTATCCACCAATTAAA+GGG | - | chr1_1:3462631-3462650 | Msa0001750:intron | 30.0% |
AAAAAGAATGGGGTAAGTAA+CGG | + | chr1_1:3462725-3462744 | None:intergenic | 30.0% | |
ATTATACAATACCATCCGAT+GGG | - | chr1_1:3462832-3462851 | Msa0001750:CDS | 30.0% | |
TAGCACAAGATTAAAAAAGC+AGG | + | chr1_1:3463022-3463041 | None:intergenic | 30.0% | |
AACATTTACCTGCAAAAATG+AGG | + | chr1_1:3463150-3463169 | None:intergenic | 30.0% | |
ACAGCTAAGACAAATTACTA+AGG | + | chr1_1:3463185-3463204 | None:intergenic | 30.0% | |
GCTCCAAAATTGAATACATT+TGG | + | chr1_1:3463227-3463246 | None:intergenic | 30.0% | |
CAAAAACCATTTCAACAACA+GGG | + | chr1_1:3463256-3463275 | None:intergenic | 30.0% | |
TCAAAAACCATTTCAACAAC+AGG | + | chr1_1:3463257-3463276 | None:intergenic | 30.0% | |
!!! | TTCACTCCTTGTTTTAAACA+GGG | - | chr1_1:3463793-3463812 | Msa0001750:CDS | 30.0% |
CTATACTCAGAAATTGAGTT+TGG | - | chr1_1:3463974-3463993 | Msa0001750:CDS | 30.0% | |
! | GAAGATTTCTACAATCGTTT+TGG | - | chr1_1:3464196-3464215 | Msa0001750:CDS | 30.0% |
AAGATTACTCTTTCCTCTAT+GGG | - | chr1_1:3464477-3464496 | Msa0001750:CDS | 30.0% | |
CTACCTGTAATGGTTATAAA+AGG | - | chr1_1:3464502-3464521 | Msa0001750:CDS | 30.0% | |
! | CTTCCTTTTATAACCATTAC+AGG | + | chr1_1:3464508-3464527 | None:intergenic | 30.0% |
TCCAAAAATATGGAGTCTAA+TGG | - | chr1_1:3464778-3464797 | Msa0001750:CDS | 30.0% | |
AAAAATATGGAGTCTAATGG+CGG | - | chr1_1:3464781-3464800 | Msa0001750:CDS | 30.0% | |
GATGAAATGTTAACTGAACT+AGG | + | chr1_1:3465081-3465100 | None:intergenic | 30.0% | |
TTCAAAAGTTTACACGTCAA+TGG | - | chr1_1:3465203-3465222 | Msa0001750:intron | 30.0% | |
CATTAGTAAGAGATTAAGAG+AGG | - | chr1_1:3465336-3465355 | Msa0001750:CDS | 30.0% | |
AGCCTATATAAACACATTAG+TGG | + | chr1_1:3465627-3465646 | None:intergenic | 30.0% | |
TATAGGCTATTCTAACCTTA+TGG | - | chr1_1:3465639-3465658 | Msa0001750:intron | 30.0% | |
ACTAATGATGATACATGACA+TGG | + | chr1_1:3465739-3465758 | None:intergenic | 30.0% | |
AAATAATCATCAGTGCTTTG+CGG | - | chr1_1:3465951-3465970 | Msa0001750:intron | 30.0% | |
ATACTCATGGAAAATTCTGT+CGG | + | chr1_1:3466104-3466123 | None:intergenic | 30.0% | |
TTTCCATGAGTATCTTTATC+AGG | - | chr1_1:3466111-3466130 | Msa0001750:intron | 30.0% | |
! | TTCAAAGTACTTGACTTGAT+TGG | + | chr1_1:3466497-3466516 | None:intergenic | 30.0% |
! | AGTCAAGTACTTTGAACTTT+TGG | - | chr1_1:3466501-3466520 | Msa0001750:intron | 30.0% |
GAGATACAAAAGAAATGACA+AGG | + | chr1_1:3466650-3466669 | None:intergenic | 30.0% | |
TAATTGCTTCAAATCTCATC+AGG | - | chr1_1:3466706-3466725 | Msa0001750:intron | 30.0% | |
GTGAATATTGTCATCATAGT+TGG | - | chr1_1:3466742-3466761 | Msa0001750:intron | 30.0% | |
ATCCACTAAAGCTAATTCAA+CGG | + | chr1_1:3466917-3466936 | None:intergenic | 30.0% | |
TCTTGAAATAACAGACTTCA+AGG | + | chr1_1:3466994-3467013 | None:intergenic | 30.0% | |
!! | TTCGCCACTTATATTTTAGA+TGG | - | chr1_1:3467049-3467068 | Msa0001750:intron | 30.0% |
!! | TCGCCACTTATATTTTAGAT+GGG | - | chr1_1:3467050-3467069 | Msa0001750:intron | 30.0% |
GATTACTAGATATGCTTGAA+GGG | - | chr1_1:3467511-3467530 | Msa0001750:intron | 30.0% | |
ACATCCAATTCTGTTCAAAA+TGG | - | chr1_1:3467615-3467634 | Msa0001750:intron | 30.0% | |
AACTCAAGATATTTCTCATC+TGG | - | chr1_1:3467833-3467852 | Msa0001750:CDS | 30.0% | |
AATACATGTCTTAGAAATCG+TGG | + | chr1_1:3467948-3467967 | None:intergenic | 30.0% | |
AGAAAGAAATGGCAAATAGT+TGG | + | chr1_1:3468086-3468105 | None:intergenic | 30.0% | |
! | CTTATAGATCAAGCTATTTC+AGG | - | chr1_1:3468385-3468404 | Msa0001750:intron | 30.0% |
! | TCTAGAGTATCTTTCAGTTT+GGG | - | chr1_1:3468604-3468623 | Msa0001750:CDS | 30.0% |
CTATGTCTATATATTCACAC+AGG | - | chr1_1:3468883-3468902 | Msa0001750:intron | 30.0% | |
TCTATATATTCACACAGGAT+GGG | - | chr1_1:3468888-3468907 | Msa0001750:intron | 30.0% | |
TATTATTATGGAAGAACCAG+TGG | + | chr1_1:3468919-3468938 | None:intergenic | 30.0% | |
! | ACTGGTTCTTCCATAATAAT+AGG | - | chr1_1:3468918-3468937 | Msa0001750:intron | 30.0% |
CAAAATCGATCAAATGAATG+AGG | + | chr1_1:3469434-3469453 | None:intergenic | 30.0% | |
!! | TTTTGGAAAAAGGGGTAAAA+AGG | + | chr1_1:3469568-3469587 | None:intergenic | 30.0% |
!! | GAGACTAATTTTGGAAAAAG+GGG | + | chr1_1:3469576-3469595 | None:intergenic | 30.0% |
!! | GGAGACTAATTTTGGAAAAA+GGG | + | chr1_1:3469577-3469596 | None:intergenic | 30.0% |
!! | TGGAGACTAATTTTGGAAAA+AGG | + | chr1_1:3469578-3469597 | None:intergenic | 30.0% |
!! | TTTTCCAAAATTAGTCTCCA+TGG | - | chr1_1:3469578-3469597 | Msa0001750:five_prime_UTR | 30.0% |
TTTCGTAAATTTCAGAGTGG+CGG | + | chr1_1:3458782-3458801 | None:intergenic | 35.0% | |
TAGAGAGAGTGAAGAATGAA+AGG | + | chr1_1:3459134-3459153 | None:intergenic | 35.0% | |
ATGTAATCTGGGTACATTAC+AGG | - | chr1_1:3459270-3459289 | Msa0001750:intron | 35.0% | |
TGGGTACATTACAGGTTATA+GGG | - | chr1_1:3459278-3459297 | Msa0001750:intron | 35.0% | |
GCAATCAATCAGAAAAAACG+TGG | + | chr1_1:3459638-3459657 | None:intergenic | 35.0% | |
TTGACAATTCTTTGTTCCTC+TGG | - | chr1_1:3459809-3459828 | Msa0001750:intron | 35.0% | |
TTAAGTTTAAAGGCTGAGAC+TGG | - | chr1_1:3459879-3459898 | Msa0001750:CDS | 35.0% | |
! | GCCTCCTATATTTTCTTGTT+AGG | - | chr1_1:3459927-3459946 | Msa0001750:CDS | 35.0% |
GCCTAACAAGAAAATATAGG+AGG | + | chr1_1:3459931-3459950 | None:intergenic | 35.0% | |
! | ATGGGGTATTAATAAAGAGG+GGG | + | chr1_1:3459989-3460008 | None:intergenic | 35.0% |
! | CCAATGGGGTATTAATAAAG+AGG | + | chr1_1:3459992-3460011 | None:intergenic | 35.0% |
CCTCTTTATTAATACCCCAT+TGG | - | chr1_1:3459989-3460008 | Msa0001750:CDS | 35.0% | |
!! | TCTAACATTGCTGTTTCCTT+AGG | - | chr1_1:3460456-3460475 | Msa0001750:intron | 35.0% |
!! | CTAACATTGCTGTTTCCTTA+GGG | - | chr1_1:3460457-3460476 | Msa0001750:intron | 35.0% |
TAACACAAATGATGTTGCTC+GGG | + | chr1_1:3460715-3460734 | None:intergenic | 35.0% | |
CTAACACAAATGATGTTGCT+CGG | + | chr1_1:3460716-3460735 | None:intergenic | 35.0% | |
CTCAACCTCATAACAAACAT+GGG | + | chr1_1:3460777-3460796 | None:intergenic | 35.0% | |
TCTCAACCTCATAACAAACA+TGG | + | chr1_1:3460778-3460797 | None:intergenic | 35.0% | |
! | CATGGGAATAATGGAAGTTA+TGG | + | chr1_1:3460847-3460866 | None:intergenic | 35.0% |
CATAACTTCCATTATTCCCA+TGG | - | chr1_1:3460845-3460864 | Msa0001750:CDS | 35.0% | |
ATCTCTTTCCATGGGAATAA+TGG | + | chr1_1:3460856-3460875 | None:intergenic | 35.0% | |
ATTATTCCCATGGAAAGAGA+TGG | - | chr1_1:3460855-3460874 | Msa0001750:CDS | 35.0% | |
TTATTCCCATGGAAAGAGAT+GGG | - | chr1_1:3460856-3460875 | Msa0001750:CDS | 35.0% | |
! | TTGTAACTTCCAATTTTCCC+AGG | - | chr1_1:3460927-3460946 | Msa0001750:intron | 35.0% |
GCAAATAACTTGACATTCCT+GGG | + | chr1_1:3460947-3460966 | None:intergenic | 35.0% | |
TTTCAATGTGAGACTTTAGG+GGG | + | chr1_1:3461070-3461089 | None:intergenic | 35.0% | |
CAAAATCAGCTTGTAATGTG+AGG | + | chr1_1:3461340-3461359 | None:intergenic | 35.0% | |
AGTAGAAATGGCAACCTATT+AGG | + | chr1_1:3461391-3461410 | None:intergenic | 35.0% | |
ATAGCACTTCAACCAATGAA+AGG | + | chr1_1:3461448-3461467 | None:intergenic | 35.0% | |
GAAATGTAGAAGTTCGTCTT+AGG | - | chr1_1:3461682-3461701 | Msa0001750:intron | 35.0% | |
CTCTCTCTACCTCTAATTAT+TGG | + | chr1_1:3461776-3461795 | None:intergenic | 35.0% | |
! | TTTTGGACAAAATGCATCGT+AGG | - | chr1_1:3461851-3461870 | Msa0001750:CDS | 35.0% |
! | ATGCATCGTAGGATTTTATG+AGG | - | chr1_1:3461862-3461881 | Msa0001750:CDS | 35.0% |
TCTGTGGTTGAATATTACCT+TGG | - | chr1_1:3461989-3462008 | Msa0001750:intron | 35.0% | |
TGGTTGAATATTACCTTGGT+TGG | - | chr1_1:3461993-3462012 | Msa0001750:intron | 35.0% | |
CAATGCTATTGGAGAACTTT+AGG | + | chr1_1:3462044-3462063 | None:intergenic | 35.0% | |
! | GTACCAAGTACACTTTAGAA+AGG | - | chr1_1:3462217-3462236 | Msa0001750:CDS | 35.0% |
! | AAGTACACTTTAGAAAGGGA+GGG | - | chr1_1:3462222-3462241 | Msa0001750:CDS | 35.0% |
GGGTGATTTAGCTAATGTTA+AGG | - | chr1_1:3462242-3462261 | Msa0001750:CDS | 35.0% | |
CTACTCTATTTATCTTCTGG+AGG | + | chr1_1:3462402-3462421 | None:intergenic | 35.0% | |
TAGAAAATCCAGCAGCATAT+TGG | - | chr1_1:3462493-3462512 | Msa0001750:CDS | 35.0% | |
GATCTTGTAAGATGTTCTCA+TGG | + | chr1_1:3462612-3462631 | None:intergenic | 35.0% | |
! | CCCTTTAATTGGTGGATAAA+AGG | + | chr1_1:3462634-3462653 | None:intergenic | 35.0% |
! | TCCACCAATTAAAGGGTTTT+AGG | - | chr1_1:3462638-3462657 | Msa0001750:intron | 35.0% |
ACCTAAAACCCTTTAATTGG+TGG | + | chr1_1:3462642-3462661 | None:intergenic | 35.0% | |
GCTACCTAAAACCCTTTAAT+TGG | + | chr1_1:3462645-3462664 | None:intergenic | 35.0% | |
TGTAACGAAACTTCTGCAAA+TGG | + | chr1_1:3462801-3462820 | None:intergenic | 35.0% | |
GGTATTGTATAATCTGGCAA+CGG | + | chr1_1:3462825-3462844 | None:intergenic | 35.0% | |
TCGGATGGTATTGTATAATC+TGG | + | chr1_1:3462831-3462850 | None:intergenic | 35.0% | |
GATTATACAATACCATCCGA+TGG | - | chr1_1:3462831-3462850 | Msa0001750:CDS | 35.0% | |
TTATACAATACCATCCGATG+GGG | - | chr1_1:3462833-3462852 | Msa0001750:CDS | 35.0% | |
! | CTTATTTATTCAACTGGCTC+AGG | - | chr1_1:3462930-3462949 | Msa0001750:CDS | 35.0% |
! | GTCTAGGAAGTGTAATTTCA+AGG | - | chr1_1:3462991-3463010 | Msa0001750:CDS | 35.0% |
! | TCTTAGCTGTTATTTGCAGA+TGG | - | chr1_1:3463195-3463214 | Msa0001750:CDS | 35.0% |
! | CTTAGCTGTTATTTGCAGAT+GGG | - | chr1_1:3463196-3463215 | Msa0001750:CDS | 35.0% |
! | AAGCTTCAGGTTTATGTTCT+TGG | - | chr1_1:3463317-3463336 | Msa0001750:CDS | 35.0% |
GTTTATGTTCTTGGACCAAT+TGG | - | chr1_1:3463326-3463345 | Msa0001750:CDS | 35.0% | |
AATCACAAAGATGCACATCA+TGG | - | chr1_1:3463392-3463411 | Msa0001750:intron | 35.0% | |
ATGCAAACAATAGATGGCTT+TGG | + | chr1_1:3463458-3463477 | None:intergenic | 35.0% | |
TTCGATTCAAGGGTAGATAA+GGG | + | chr1_1:3463485-3463504 | None:intergenic | 35.0% | |
TTTCGATTCAAGGGTAGATA+AGG | + | chr1_1:3463486-3463505 | None:intergenic | 35.0% | |
ATGTAGCGATTTCGATTCAA+GGG | + | chr1_1:3463495-3463514 | None:intergenic | 35.0% | |
!!! | CTTGTTGCTGTTTTATCAGA+TGG | - | chr1_1:3463515-3463534 | Msa0001750:CDS | 35.0% |
GTTTAAAGGTTGTCACAACA+CGG | - | chr1_1:3463615-3463634 | Msa0001750:CDS | 35.0% | |
AAGAGTTCCAGCAGAATAAT+AGG | + | chr1_1:3463741-3463760 | None:intergenic | 35.0% | |
! | CTGTTTAAAACAAGGAGTGA+AGG | + | chr1_1:3463794-3463813 | None:intergenic | 35.0% |
!!! | CTTCACTCCTTGTTTTAAAC+AGG | - | chr1_1:3463792-3463811 | Msa0001750:CDS | 35.0% |
! | TCGAATCCCTGTTTAAAACA+AGG | + | chr1_1:3463802-3463821 | None:intergenic | 35.0% |
GTATCTTCTTTACCAGTTGA+AGG | - | chr1_1:3463890-3463909 | Msa0001750:CDS | 35.0% | |
ATCTGGTAGAGGTAAAACAT+CGG | + | chr1_1:3463933-3463952 | None:intergenic | 35.0% | |
TACTCAGAAATTGAGTTTGG+TGG | - | chr1_1:3463977-3463996 | Msa0001750:CDS | 35.0% | |
CTCAATGGAATCATGTGAAA+GGG | - | chr1_1:3464009-3464028 | Msa0001750:CDS | 35.0% | |
! | ACAGGCCATTAGACATTTTA+AGG | - | chr1_1:3464137-3464156 | Msa0001750:CDS | 35.0% |
TAAAACTGATCTCGGAGAAT+TGG | + | chr1_1:3464176-3464195 | None:intergenic | 35.0% | |
!!! | TTTTTTCAGGTGCACATGAA+GGG | - | chr1_1:3464437-3464456 | Msa0001750:CDS | 35.0% |
CAAGATTACTCTTTCCTCTA+TGG | - | chr1_1:3464476-3464495 | Msa0001750:CDS | 35.0% | |
AAAGGAAGTTTAAGTGCTTC+AGG | - | chr1_1:3464520-3464539 | Msa0001750:CDS | 35.0% | |
TCAGGCACTTCATTTGAAAA+TGG | - | chr1_1:3464538-3464557 | Msa0001750:CDS | 35.0% | |
CAGGCACTTCATTTGAAAAT+GGG | - | chr1_1:3464539-3464558 | Msa0001750:CDS | 35.0% | |
AGGCACTTCATTTGAAAATG+GGG | - | chr1_1:3464540-3464559 | Msa0001750:CDS | 35.0% | |
AAGATCGAAGTTTGTGTTCA+AGG | + | chr1_1:3464603-3464622 | None:intergenic | 35.0% | |
GTAAGTGGTTCCATTCTATA+TGG | - | chr1_1:3464694-3464713 | Msa0001750:CDS | 35.0% | |
ACAAGGTTCTTACCATACTT+CGG | + | chr1_1:3464747-3464766 | None:intergenic | 35.0% | |
AGTATGGTAAGAACCTTGTT+CGG | - | chr1_1:3464748-3464767 | Msa0001750:CDS | 35.0% | |
CGGTGCATATTCCAAAAATA+TGG | - | chr1_1:3464768-3464787 | Msa0001750:CDS | 35.0% | |
! | GCCATTAGACTCCATATTTT+TGG | + | chr1_1:3464782-3464801 | None:intergenic | 35.0% |
!! | CAACCTTTGCCTTTTATTTG+CGG | + | chr1_1:3464812-3464831 | None:intergenic | 35.0% |
GTGCAACCATTTAGCAATAT+AGG | + | chr1_1:3464873-3464892 | None:intergenic | 35.0% | |
!! | TCAACTAGTTTGTTCTGAAG+AGG | - | chr1_1:3465099-3465118 | Msa0001750:CDS | 35.0% |
!! | CAACTAGTTTGTTCTGAAGA+GGG | - | chr1_1:3465100-3465119 | Msa0001750:CDS | 35.0% |
! | ATATAAGCCTTGTAGCAAGA+CGG | + | chr1_1:3465129-3465148 | None:intergenic | 35.0% |
AAGGCTTATATCTGCTCTAA+TGG | - | chr1_1:3465138-3465157 | Msa0001750:intron | 35.0% | |
ATGGAGGTAGAACATTGTTT+AGG | - | chr1_1:3465157-3465176 | Msa0001750:intron | 35.0% | |
TTACAAATTCTTCTTAGCCG+TGG | - | chr1_1:3465387-3465406 | Msa0001750:CDS | 35.0% | |
GACTATAGATGATGAGGAAA+AGG | - | chr1_1:3465432-3465451 | Msa0001750:CDS | 35.0% | |
! | TACTGTTTGCAAACGTTTTG+AGG | - | chr1_1:3465516-3465535 | Msa0001750:CDS | 35.0% |
!!! | GCAAACGTTTTGAGGATTTA+AGG | - | chr1_1:3465524-3465543 | Msa0001750:CDS | 35.0% |
! | GTTTTCACAGAAATGGAGAA+GGG | + | chr1_1:3465570-3465589 | None:intergenic | 35.0% |
! | AGTTTTCACAGAAATGGAGA+AGG | + | chr1_1:3465571-3465590 | None:intergenic | 35.0% |
! | ATTGATGGCATGCTAATCAT+AGG | + | chr1_1:3465770-3465789 | None:intergenic | 35.0% |
GTGTTTGACATTCAGATTGA+TGG | + | chr1_1:3465785-3465804 | None:intergenic | 35.0% | |
AGCTTCATAAAACCTGCAAT+AGG | + | chr1_1:3465813-3465832 | None:intergenic | 35.0% | |
!!! | GCTTATATACTTTTTCCGAG+AGG | + | chr1_1:3466053-3466072 | None:intergenic | 35.0% |
TATAAGCCAAATTGTTCAGC+TGG | - | chr1_1:3466066-3466085 | Msa0001750:intron | 35.0% | |
ATAAGCCAAATTGTTCAGCT+GGG | - | chr1_1:3466067-3466086 | Msa0001750:intron | 35.0% | |
TACTCATGGAAAATTCTGTC+GGG | + | chr1_1:3466103-3466122 | None:intergenic | 35.0% | |
TAGCCTGATAAAGATACTCA+TGG | + | chr1_1:3466117-3466136 | None:intergenic | 35.0% | |
TATCAGGCTATGATAGACTT+AGG | - | chr1_1:3466127-3466146 | Msa0001750:intron | 35.0% | |
AGGTCTTGAGAATGAATTGT+TGG | - | chr1_1:3466147-3466166 | Msa0001750:intron | 35.0% | |
GAGAATGAATTGTTGGAGTA+TGG | - | chr1_1:3466154-3466173 | Msa0001750:intron | 35.0% | |
AATGAATTGTTGGAGTATGG+AGG | - | chr1_1:3466157-3466176 | Msa0001750:intron | 35.0% | |
!! | CACTTTTTAAGAAGGGCAAT+AGG | + | chr1_1:3466189-3466208 | None:intergenic | 35.0% |
TAATAAGCGACCTCATGTAT+GGG | + | chr1_1:3466223-3466242 | None:intergenic | 35.0% | |
ATAATAAGCGACCTCATGTA+TGG | + | chr1_1:3466224-3466243 | None:intergenic | 35.0% | |
TTAATGGCCTAATGTTCACT+TGG | - | chr1_1:3466265-3466284 | Msa0001750:intron | 35.0% | |
! | CTTTTGACCAAGTGAACATT+AGG | + | chr1_1:3466275-3466294 | None:intergenic | 35.0% |
!!! | TTTTGTTTTCCCTATCTGCT+AGG | - | chr1_1:3466414-3466433 | Msa0001750:intron | 35.0% |
! | AGTACTTTGAACTTTTGGCA+AGG | - | chr1_1:3466506-3466525 | Msa0001750:intron | 35.0% |
AAACTGTTAAGATCCCACAT+TGG | - | chr1_1:3466843-3466862 | Msa0001750:intron | 35.0% | |
!! | AACCATTACAAGGAGTACTT+TGG | + | chr1_1:3466880-3466899 | None:intergenic | 35.0% |
AAGTACTCCTTGTAATGGTT+AGG | - | chr1_1:3466880-3466899 | Msa0001750:intron | 35.0% | |
TCCACTAAAGCTAATTCAAC+GGG | + | chr1_1:3466916-3466935 | None:intergenic | 35.0% | |
ATGTCAATCAGAGTTGAAGT+TGG | - | chr1_1:3467020-3467039 | Msa0001750:intron | 35.0% | |
CAGATTACAGAATCATGTAG+AGG | + | chr1_1:3467321-3467340 | None:intergenic | 35.0% | |
TCAGATCACCTGAATAGTTT+CGG | - | chr1_1:3467348-3467367 | Msa0001750:intron | 35.0% | |
AAGAATGCAACAAATAGCGA+TGG | - | chr1_1:3467453-3467472 | Msa0001750:intron | 35.0% | |
AGAATGCAACAAATAGCGAT+GGG | - | chr1_1:3467454-3467473 | Msa0001750:intron | 35.0% | |
GGATTACTAGATATGCTTGA+AGG | - | chr1_1:3467510-3467529 | Msa0001750:intron | 35.0% | |
CAAATCTGATGATAGCTCTT+TGG | + | chr1_1:3467703-3467722 | None:intergenic | 35.0% | |
AATCGTGGAAGTAAATAGCT+CGG | + | chr1_1:3467933-3467952 | None:intergenic | 35.0% | |
AGACATGTATTGTTTGGTTG+AGG | - | chr1_1:3467957-3467976 | Msa0001750:intron | 35.0% | |
GACATGTATTGTTTGGTTGA+GGG | - | chr1_1:3467958-3467977 | Msa0001750:intron | 35.0% | |
! | TTGGTTTGACAAGACAGAAA+AGG | + | chr1_1:3468127-3468146 | None:intergenic | 35.0% |
! | TCAAACCAAATGAAGCATCA+CGG | - | chr1_1:3468138-3468157 | Msa0001750:intron | 35.0% |
GAATAATACACAACCAAGAC+CGG | + | chr1_1:3468203-3468222 | None:intergenic | 35.0% | |
! | AATTTTCTTTCAGACATGCC+TGG | - | chr1_1:3468294-3468313 | Msa0001750:intron | 35.0% |
CTGTACTTTGCTAACTATTC+TGG | - | chr1_1:3468322-3468341 | Msa0001750:intron | 35.0% | |
! | ATAGATCAAGCTATTTCAGG+AGG | - | chr1_1:3468388-3468407 | Msa0001750:intron | 35.0% |
! | AGATACTCTAGAGAGTACAA+GGG | + | chr1_1:3468596-3468615 | None:intergenic | 35.0% |
! | AAGATACTCTAGAGAGTACA+AGG | + | chr1_1:3468597-3468616 | None:intergenic | 35.0% |
!! | CTCTAGAGTATCTTTCAGTT+TGG | - | chr1_1:3468603-3468622 | Msa0001750:CDS | 35.0% |
TGATCATATGCGTTCAATAC+AGG | + | chr1_1:3468777-3468796 | None:intergenic | 35.0% | |
CATCCCCAAATCTTAGATTA+CGG | - | chr1_1:3468823-3468842 | Msa0001750:intron | 35.0% | |
! | CATCCGTAATCTAAGATTTG+GGG | + | chr1_1:3468829-3468848 | None:intergenic | 35.0% |
! | GCATCCGTAATCTAAGATTT+GGG | + | chr1_1:3468830-3468849 | None:intergenic | 35.0% |
! | AGCATCCGTAATCTAAGATT+TGG | + | chr1_1:3468831-3468850 | None:intergenic | 35.0% |
GTCTATATATTCACACAGGA+TGG | - | chr1_1:3468887-3468906 | Msa0001750:intron | 35.0% | |
GGTTCTTCCATAATAATAGG+CGG | - | chr1_1:3468921-3468940 | Msa0001750:intron | 35.0% | |
! | TGATTTTGTCCCTAATTCCT+TGG | + | chr1_1:3468977-3468996 | None:intergenic | 35.0% |
AAATCACAAGTGTAGCAAAC+AGG | - | chr1_1:3468991-3469010 | Msa0001750:intron | 35.0% | |
AAATCACAAGTGTAGCAAAC+AGG | - | chr1_1:3468991-3469010 | Msa0001750:intron | 35.0% | |
ACAGGTATATGACTGAAGTA+CGG | - | chr1_1:3469333-3469352 | Msa0001750:CDS | 35.0% | |
TTCGTAAATTTCAGAGTGGC+GGG | + | chr1_1:3458781-3458800 | None:intergenic | 40.0% | |
GGGTTTCGTAAATTTCAGAG+TGG | + | chr1_1:3458785-3458804 | None:intergenic | 40.0% | |
AGAGAATTAACGGCGATGTA+GGG | + | chr1_1:3458817-3458836 | None:intergenic | 40.0% | |
! | AAGCTTCTAGAGATTCTTCG+AGG | + | chr1_1:3459067-3459086 | None:intergenic | 40.0% |
!! | TCTCTAGGGTGAGTAGAATA+AGG | + | chr1_1:3459107-3459126 | None:intergenic | 40.0% |
TTATTCTACTCACCCTAGAG+AGG | - | chr1_1:3459106-3459125 | Msa0001750:intron | 40.0% | |
!! | GAATGAAAGGTACCTCTCTA+GGG | + | chr1_1:3459121-3459140 | None:intergenic | 40.0% |
!! | AGAATGAAAGGTACCTCTCT+AGG | + | chr1_1:3459122-3459141 | None:intergenic | 40.0% |
CTGGGTACATTACAGGTTAT+AGG | - | chr1_1:3459277-3459296 | Msa0001750:intron | 40.0% | |
GGTGTGTGTTGAGCATAATT+AGG | - | chr1_1:3459338-3459357 | Msa0001750:CDS | 40.0% | |
!! | GCTGTTTTCATAAGCTATCG+TGG | - | chr1_1:3459468-3459487 | Msa0001750:CDS | 40.0% |
CACTAAGGAGCTGTTTGAAT+TGG | + | chr1_1:3459597-3459616 | None:intergenic | 40.0% | |
!!! | GCCTTTTGTTGTTGTTTCAG+TGG | - | chr1_1:3459656-3459675 | Msa0001750:intron | 40.0% |
GCCACTGAAACAACAACAAA+AGG | + | chr1_1:3459660-3459679 | None:intergenic | 40.0% | |
TATTCGCTACCTCAACCAAA+GGG | + | chr1_1:3459684-3459703 | None:intergenic | 40.0% | |
ATTGAAAGATACAATGCGGC+TGG | - | chr1_1:3459727-3459746 | Msa0001750:intron | 40.0% | |
CTTAAACTGTTACAGAGGAC+CGG | + | chr1_1:3460117-3460136 | None:intergenic | 40.0% | |
GAACAAGCTATTTGTGCTGT+TGG | - | chr1_1:3460509-3460528 | Msa0001750:intron | 40.0% | |
GGTCTTGCAAAATCAAAGCA+CGG | - | chr1_1:3460530-3460549 | Msa0001750:intron | 40.0% | |
ACATTCCCATCTCTTTCCAT+GGG | + | chr1_1:3460864-3460883 | None:intergenic | 40.0% | |
CTTGACATTCCTGGGAAAAT+TGG | + | chr1_1:3460939-3460958 | None:intergenic | 40.0% | |
GGCAAATAACTTGACATTCC+TGG | + | chr1_1:3460948-3460967 | None:intergenic | 40.0% | |
! | AATTCCGGGTATGTTTTTCC+TGG | - | chr1_1:3461015-3461034 | Msa0001750:intron | 40.0% |
! | ATTCCGGGTATGTTTTTCCT+GGG | - | chr1_1:3461016-3461035 | Msa0001750:intron | 40.0% |
ATTCCCAGGAAAAACATACC+CGG | + | chr1_1:3461022-3461041 | None:intergenic | 40.0% | |
GGGAAACACAAATTATTCCC+AGG | + | chr1_1:3461036-3461055 | None:intergenic | 40.0% | |
TTGATCGCTGTTCCTTTCAT+TGG | - | chr1_1:3461433-3461452 | Msa0001750:intron | 40.0% | |
TACAATGGATAAGTGGACAG+TGG | - | chr1_1:3461582-3461601 | Msa0001750:intron | 40.0% | |
ATGTAGAAGTTCGTCTTAGG+TGG | - | chr1_1:3461685-3461704 | Msa0001750:intron | 40.0% | |
GAGTTCAGACAATAACAACC+AGG | + | chr1_1:3461929-3461948 | None:intergenic | 40.0% | |
! | CTTTTGCTCAATTCCAACCA+AGG | + | chr1_1:3462009-3462028 | None:intergenic | 40.0% |
!! | GTGGACTGGTACAAAAATGA+GGG | + | chr1_1:3462114-3462133 | None:intergenic | 40.0% |
!! | CTCATTTTTGTACCAGTCCA+CGG | - | chr1_1:3462113-3462132 | Msa0001750:CDS | 40.0% |
GAGTACAGGAGACTGATATT+TGG | - | chr1_1:3462160-3462179 | Msa0001750:CDS | 40.0% | |
!! | CTCCCTTTCTAAAGTGTACT+TGG | + | chr1_1:3462223-3462242 | None:intergenic | 40.0% |
! | CAAGTACACTTTAGAAAGGG+AGG | - | chr1_1:3462221-3462240 | Msa0001750:CDS | 40.0% |
TCTTTGGGCTTATTCAAGCT+TGG | - | chr1_1:3462276-3462295 | Msa0001750:CDS | 40.0% | |
! | TTTCAGGTGATTCTCTCTTG+AGG | + | chr1_1:3462473-3462492 | None:intergenic | 40.0% |
! | GCTGCTGGATTTTCTATTTC+AGG | + | chr1_1:3462489-3462508 | None:intergenic | 40.0% |
GAAGAATACCAATATGCTGC+TGG | + | chr1_1:3462504-3462523 | None:intergenic | 40.0% | |
CTGAAAAGAACATACTGCAC+TGG | + | chr1_1:3462682-3462701 | None:intergenic | 40.0% | |
! | TTTATTCAACTGGCTCAGGA+TGG | - | chr1_1:3462934-3462953 | Msa0001750:CDS | 40.0% |
TGTTGACCCTGTTGTTGAAA+TGG | - | chr1_1:3463247-3463266 | Msa0001750:CDS | 40.0% | |
AGAGACAGATACTGTATGCA+CGG | - | chr1_1:3463282-3463301 | Msa0001750:CDS | 40.0% | |
! | TTCTTGGACCAATTGGTGAT+GGG | - | chr1_1:3463333-3463352 | Msa0001750:CDS | 40.0% |
TTTAATGGCCCATCACCAAT+TGG | + | chr1_1:3463344-3463363 | None:intergenic | 40.0% | |
GGTGAGATGCAAACAATAGA+TGG | + | chr1_1:3463464-3463483 | None:intergenic | 40.0% | |
GATGTAGCGATTTCGATTCA+AGG | + | chr1_1:3463496-3463515 | None:intergenic | 40.0% | |
! | CTGTTTTATCAGATGGCAGA+AGG | - | chr1_1:3463522-3463541 | Msa0001750:CDS | 40.0% |
TTAAACAGCTAGGCTTGTGA+TGG | + | chr1_1:3463601-3463620 | None:intergenic | 40.0% | |
TCACAAGCCTAGCTGTTTAA+AGG | - | chr1_1:3463601-3463620 | Msa0001750:CDS | 40.0% | |
GTGACAACCTTTAAACAGCT+AGG | + | chr1_1:3463611-3463630 | None:intergenic | 40.0% | |
TGCTGGAACTCTTATCCTTT+CGG | - | chr1_1:3463748-3463767 | Msa0001750:CDS | 40.0% | |
! | TGAACAGTAGCTGAAGTATC+TGG | + | chr1_1:3463950-3463969 | None:intergenic | 40.0% |
GCTCAATGGAATCATGTGAA+AGG | - | chr1_1:3464008-3464027 | Msa0001750:CDS | 40.0% | |
ATTGTCATCTTCAGCACCAT+GGG | - | chr1_1:3464094-3464113 | Msa0001750:CDS | 40.0% | |
AACAATTTCCATCATGCCCA+TGG | + | chr1_1:3464113-3464132 | None:intergenic | 40.0% | |
!! | GGCCATTAGACATTTTAAGG+CGG | - | chr1_1:3464140-3464159 | Msa0001750:CDS | 40.0% |
AGCCGCCTTAAAATGTCTAA+TGG | + | chr1_1:3464145-3464164 | None:intergenic | 40.0% | |
!!! | TTCTACAATCGTTTTGGAGC+CGG | - | chr1_1:3464202-3464221 | Msa0001750:CDS | 40.0% |
! | TGTGTTTAATGCTAGCTTCG+AGG | - | chr1_1:3464239-3464258 | Msa0001750:CDS | 40.0% |
CAGCAATGTTATTGCAGAGA+AGG | - | chr1_1:3464285-3464304 | Msa0001750:CDS | 40.0% | |
TTTGAGGATCCAAGACTTGT+TGG | - | chr1_1:3464319-3464338 | Msa0001750:CDS | 40.0% | |
TCATGTGCACCTGAAAAAAC+AGG | + | chr1_1:3464436-3464455 | None:intergenic | 40.0% | |
!!! | GTTTTTTCAGGTGCACATGA+AGG | - | chr1_1:3464436-3464455 | Msa0001750:CDS | 40.0% |
ATTACAGGTAGTTCCCATAG+AGG | + | chr1_1:3464493-3464512 | None:intergenic | 40.0% | |
TCTATGGGAACTACCTGTAA+TGG | - | chr1_1:3464492-3464511 | Msa0001750:CDS | 40.0% | |
GTTGTATGCAGACTATCCAT+CGG | - | chr1_1:3464565-3464584 | Msa0001750:CDS | 40.0% | |
TTGTATGCAGACTATCCATC+GGG | - | chr1_1:3464566-3464585 | Msa0001750:CDS | 40.0% | |
TAAGATCTAGAAGGAACCAG+AGG | - | chr1_1:3464635-3464654 | Msa0001750:CDS | 40.0% | |
TATGGTTGTGTAGCAGGATT+AGG | - | chr1_1:3464667-3464686 | Msa0001750:CDS | 40.0% | |
AGTGGTTCCATTCTATATGG+TGG | - | chr1_1:3464697-3464716 | Msa0001750:CDS | 40.0% | |
AGAACCACCACCATATAGAA+TGG | + | chr1_1:3464707-3464726 | None:intergenic | 40.0% | |
! | TTTGGAATATGCACCGAACA+AGG | + | chr1_1:3464764-3464783 | None:intergenic | 40.0% |
!! | ACTTCTGTTTGTTGTGTCAC+AGG | - | chr1_1:3464928-3464947 | Msa0001750:CDS | 40.0% |
GCTTATATCTGCTCTAATGG+AGG | - | chr1_1:3465141-3465160 | Msa0001750:intron | 40.0% | |
ACATTGCTCCAGTATTACAC+TGG | - | chr1_1:3465286-3465305 | Msa0001750:intron | 40.0% | |
CATCTGTACCAGTGTAATAC+TGG | + | chr1_1:3465297-3465316 | None:intergenic | 40.0% | |
CAGTATTACACTGGTACAGA+TGG | - | chr1_1:3465295-3465314 | Msa0001750:intron | 40.0% | |
ATTACACTGGTACAGATGGT+AGG | - | chr1_1:3465299-3465318 | Msa0001750:intron | 40.0% | |
TTACACTGGTACAGATGGTA+GGG | - | chr1_1:3465300-3465319 | Msa0001750:intron | 40.0% | |
TCAGACTCCTTATAGTAGCT+CGG | + | chr1_1:3465367-3465386 | None:intergenic | 40.0% | |
TGCTGTGACTATAGATGATG+AGG | - | chr1_1:3465426-3465445 | Msa0001750:CDS | 40.0% | |
!! | AGACTCTGGAACTTTGCTTA+AGG | + | chr1_1:3465485-3465504 | None:intergenic | 40.0% |
GTAATTGGCCCATTAGTCAT+TGG | + | chr1_1:3465671-3465690 | None:intergenic | 40.0% | |
! | AGTTTGCTTACCTCTTCAGA+AGG | - | chr1_1:3465835-3465854 | Msa0001750:intron | 40.0% |
CATTATAAGCATCACCTGCA+GGG | + | chr1_1:3465874-3465893 | None:intergenic | 40.0% | |
TCATTATAAGCATCACCTGC+AGG | + | chr1_1:3465875-3465894 | None:intergenic | 40.0% | |
GATTGTGAAGCAGATCCAAT+GGG | + | chr1_1:3466016-3466035 | None:intergenic | 40.0% | |
AGATTGTGAAGCAGATCCAA+TGG | + | chr1_1:3466017-3466036 | None:intergenic | 40.0% | |
!!! | ATATACTTTTTCCGAGAGGC+TGG | + | chr1_1:3466049-3466068 | None:intergenic | 40.0% |
TTAAGAAGGGCAATAGGTCA+GGG | + | chr1_1:3466183-3466202 | None:intergenic | 40.0% | |
TTTAAGAAGGGCAATAGGTC+AGG | + | chr1_1:3466184-3466203 | None:intergenic | 40.0% | |
! | TTGCCCTTCTTAAAAAGTGC+TGG | - | chr1_1:3466190-3466209 | Msa0001750:intron | 40.0% |
!! | CGACCAGCACTTTTTAAGAA+GGG | + | chr1_1:3466196-3466215 | None:intergenic | 40.0% |
!! | ACGACCAGCACTTTTTAAGA+AGG | + | chr1_1:3466197-3466216 | None:intergenic | 40.0% |
! | TTGACTTGATTGGACGACAT+AGG | + | chr1_1:3466487-3466506 | None:intergenic | 40.0% |
! | CAAGGTATTACGTGTTGAAG+CGG | - | chr1_1:3466524-3466543 | Msa0001750:intron | 40.0% |
! | TGTATCTCTTTGGAAGCTTC+TGG | - | chr1_1:3466662-3466681 | Msa0001750:intron | 40.0% |
GCATGATGTCGTTCGTTATT+TGG | + | chr1_1:3466820-3466839 | None:intergenic | 40.0% | |
GGATTGTCCTAACCATTACA+AGG | + | chr1_1:3466890-3466909 | None:intergenic | 40.0% | |
TAAAGCTAATTCAACGGGGT+AGG | + | chr1_1:3466911-3466930 | None:intergenic | 40.0% | |
CCACTAAAGCTAATTCAACG+GGG | + | chr1_1:3466915-3466934 | None:intergenic | 40.0% | |
TACATAAGGATTCGCGATTC+GGG | + | chr1_1:3467159-3467178 | None:intergenic | 40.0% | |
GTACATAAGGATTCGCGATT+CGG | + | chr1_1:3467160-3467179 | None:intergenic | 40.0% | |
TAGAGGTCTGATGTGGAAAA+GGG | + | chr1_1:3467304-3467323 | None:intergenic | 40.0% | |
AATCATGTAGAGGTCTGATG+TGG | + | chr1_1:3467311-3467330 | None:intergenic | 40.0% | |
CCTGTAAAACTGCATTGCTT+AGG | + | chr1_1:3467431-3467450 | None:intergenic | 40.0% | |
! | CCTAAGCAATGCAGTTTTAC+AGG | - | chr1_1:3467428-3467447 | Msa0001750:intron | 40.0% |
!! | ATGGGTTGGTTAGTTCTACT+CGG | - | chr1_1:3467472-3467491 | Msa0001750:intron | 40.0% |
CAAAGAGGAACTAGAGCATA+TGG | - | chr1_1:3467566-3467585 | Msa0001750:intron | 40.0% | |
GCAAAATTGGCATCAACAGT+TGG | + | chr1_1:3467660-3467679 | None:intergenic | 40.0% | |
GCGTGTTGCATTTGCAAAAT+TGG | + | chr1_1:3467673-3467692 | None:intergenic | 40.0% | |
ATGCTGTTCCCTTTAAACTC+TGG | - | chr1_1:3467751-3467770 | Msa0001750:CDS | 40.0% | |
TGCTGTTCCCTTTAAACTCT+GGG | - | chr1_1:3467752-3467771 | Msa0001750:CDS | 40.0% | |
AGTACCTCCCAGAGTTTAAA+GGG | + | chr1_1:3467762-3467781 | None:intergenic | 40.0% | |
AAGTACCTCCCAGAGTTTAA+AGG | + | chr1_1:3467763-3467782 | None:intergenic | 40.0% | |
! | GAGGTACTTCTTTCTCTTTC+TGG | - | chr1_1:3467774-3467793 | Msa0001750:CDS | 40.0% |
GCTAAAGCTCAAAAGACTGA+AGG | + | chr1_1:3467897-3467916 | None:intergenic | 40.0% | |
GTATTGTTTGGTTGAGGGAA+AGG | - | chr1_1:3467963-3467982 | Msa0001750:intron | 40.0% | |
TTTGGTTGAGGGAAAGGATA+GGG | - | chr1_1:3467969-3467988 | Msa0001750:intron | 40.0% | |
TAGCATTGTCAGAGAGACAT+GGG | - | chr1_1:3468357-3468376 | Msa0001750:intron | 40.0% | |
TGAAAAACAGTTCCATCACC+AGG | + | chr1_1:3468466-3468485 | None:intergenic | 40.0% | |
ACCCTTACAAGCAGAAACAA+GGG | + | chr1_1:3468745-3468764 | None:intergenic | 40.0% | |
! | CGTAATCTAAGATTTGGGGA+TGG | + | chr1_1:3468825-3468844 | None:intergenic | 40.0% |
TCTTCCATAATAATAGGCGG+TGG | - | chr1_1:3468924-3468943 | Msa0001750:intron | 40.0% | |
GAATCCACCGCCTATTATTA+TGG | + | chr1_1:3468931-3468950 | None:intergenic | 40.0% | |
AGTTGCTAGCCAAGGAATTA+GGG | - | chr1_1:3468965-3468984 | Msa0001750:intron | 40.0% | |
ATAATGGTGTATTGGGATCG+AGG | + | chr1_1:3469220-3469239 | None:intergenic | 40.0% | |
GACAATGATTCACACACTTG+AGG | + | chr1_1:3469266-3469285 | None:intergenic | 40.0% | |
!! | CTTCAAGTTCTTTAAAGCCG+CGG | + | chr1_1:3469397-3469416 | None:intergenic | 40.0% |
! | ACGTCCATGGAGACTAATTT+TGG | + | chr1_1:3469585-3469604 | None:intergenic | 40.0% |
! | TAACGGCGATGTAGGGTTTT+GGG | + | chr1_1:3458810-3458829 | None:intergenic | 45.0% |
! | TTAACGGCGATGTAGGGTTT+TGG | + | chr1_1:3458811-3458830 | None:intergenic | 45.0% |
GAGAGAATTAACGGCGATGT+AGG | + | chr1_1:3458818-3458837 | None:intergenic | 45.0% | |
TCTCTCTCTCTCTCTCTCAT+CGG | - | chr1_1:3458939-3458958 | Msa0001750:CDS | 45.0% | |
CTCGTTGTCAGTGATCGAAT+TGG | - | chr1_1:3459017-3459036 | Msa0001750:intron | 45.0% | |
CGAGCTGAGAAGAAACTTCA+CGG | + | chr1_1:3459043-3459062 | None:intergenic | 45.0% | |
ACTGAAGCACAAGCTCACTA+AGG | + | chr1_1:3459612-3459631 | None:intergenic | 45.0% | |
ATTCGCTACCTCAACCAAAG+GGG | + | chr1_1:3459683-3459702 | None:intergenic | 45.0% | |
GTATTCGCTACCTCAACCAA+AGG | + | chr1_1:3459685-3459704 | None:intergenic | 45.0% | |
TGGTTGAGGTAGCGAATACA+TGG | - | chr1_1:3459686-3459705 | Msa0001750:intron | 45.0% | |
GGTTGAGGTAGCGAATACAT+GGG | - | chr1_1:3459687-3459706 | Msa0001750:intron | 45.0% | |
AAAGATACAATGCGGCTGGT+GGG | - | chr1_1:3459731-3459750 | Msa0001750:intron | 45.0% | |
TTCCTGAAATACGTAGGGCA+TGG | - | chr1_1:3459779-3459798 | Msa0001750:intron | 45.0% | |
TCCTGAAATACGTAGGGCAT+GGG | - | chr1_1:3459780-3459799 | Msa0001750:intron | 45.0% | |
!! | TCCTCTGGCGTTTTGATAAG+TGG | - | chr1_1:3459824-3459843 | Msa0001750:CDS | 45.0% |
ACCACTTATCAAAACGCCAG+AGG | + | chr1_1:3459828-3459847 | None:intergenic | 45.0% | |
!! | CTTACTTGGGTGTTTCTAGC+CGG | - | chr1_1:3460095-3460114 | Msa0001750:intron | 45.0% |
!! | CATTGCTGTTTCCTTAGGGA+TGG | - | chr1_1:3460461-3460480 | Msa0001750:intron | 45.0% |
GGTCAGTGTCCTGAATATAG+TGG | - | chr1_1:3460482-3460501 | Msa0001750:intron | 45.0% | |
TGTTCCTCGCCACTATATTC+AGG | + | chr1_1:3460494-3460513 | None:intergenic | 45.0% | |
AATCTTAGCAACCCCTGTTG+AGG | - | chr1_1:3460583-3460602 | Msa0001750:CDS | 45.0% | |
AGATGGCCAATACCTCAACA+GGG | + | chr1_1:3460598-3460617 | None:intergenic | 45.0% | |
TAGATGGCCAATACCTCAAC+AGG | + | chr1_1:3460599-3460618 | None:intergenic | 45.0% | |
TTCCTGGGTATAAAGGTTCC+TGG | - | chr1_1:3460806-3460825 | Msa0001750:CDS | 45.0% | |
TCCTGGGTATAAAGGTTCCT+GGG | - | chr1_1:3460807-3460826 | Msa0001750:CDS | 45.0% | |
TGGGAAGTTACTTCATTCCC+AGG | + | chr1_1:3460827-3460846 | None:intergenic | 45.0% | |
CACATTCCCATCTCTTTCCA+TGG | + | chr1_1:3460865-3460884 | None:intergenic | 45.0% | |
!!! | TTTAGGGGGCGTTTGTTTTG+GGG | + | chr1_1:3461056-3461075 | None:intergenic | 45.0% |
!!! | CTTTAGGGGGCGTTTGTTTT+GGG | + | chr1_1:3461057-3461076 | None:intergenic | 45.0% |
!!! | ACTTTAGGGGGCGTTTGTTT+TGG | + | chr1_1:3461058-3461077 | None:intergenic | 45.0% |
!! | AAAACCGGCTTGTGAGGTAA+GGG | + | chr1_1:3461129-3461148 | None:intergenic | 45.0% |
TTGGGCATGAGACATGCATT+GGG | - | chr1_1:3461251-3461270 | Msa0001750:intron | 45.0% | |
CTGACTCCCTCTAGTGATAA+AGG | - | chr1_1:3461902-3461921 | Msa0001750:intron | 45.0% | |
CCAGGTCCTTTATCACTAGA+GGG | + | chr1_1:3461911-3461930 | None:intergenic | 45.0% | |
ACCAGGTCCTTTATCACTAG+AGG | + | chr1_1:3461912-3461931 | None:intergenic | 45.0% | |
!! | CGTGGACTGGTACAAAAATG+AGG | + | chr1_1:3462115-3462134 | None:intergenic | 45.0% |
AAGGGTTAGACTTCGAGTAC+AGG | - | chr1_1:3462146-3462165 | Msa0001750:CDS | 45.0% | |
TTGGGCTTATTCAAGCTTGG+CGG | - | chr1_1:3462279-3462298 | Msa0001750:CDS | 45.0% | |
! | TCTTTTCAGACCTCCATGCA+AGG | - | chr1_1:3462693-3462712 | Msa0001750:intron | 45.0% |
! | CTTTTCAGACCTCCATGCAA+GGG | - | chr1_1:3462694-3462713 | Msa0001750:intron | 45.0% |
ACTTGTCATCGTAACCCCAT+CGG | + | chr1_1:3462850-3462869 | None:intergenic | 45.0% | |
! | AAGTGTGGCATGTACCGATA+AGG | - | chr1_1:3462866-3462885 | Msa0001750:CDS | 45.0% |
! | AGTGTGGCATGTACCGATAA+GGG | - | chr1_1:3462867-3462886 | Msa0001750:CDS | 45.0% |
AAGGAAAATGCGGCCCTTAT+CGG | + | chr1_1:3462883-3462902 | None:intergenic | 45.0% | |
! | ATTTTCCTTGCTGGTCGTGA+TGG | - | chr1_1:3462894-3462913 | Msa0001750:CDS | 45.0% |
! | AGAAAAGTATGCGTCACTGC+TGG | - | chr1_1:3462969-3462988 | Msa0001750:CDS | 45.0% |
!! | TGCAGTCACCTCATTTTTGC+AGG | - | chr1_1:3463139-3463158 | Msa0001750:intron | 45.0% |
GACTGAAGAGATGAAGCTTC+AGG | - | chr1_1:3463304-3463323 | Msa0001750:CDS | 45.0% | |
GTTCTTGGACCAATTGGTGA+TGG | - | chr1_1:3463332-3463351 | Msa0001750:CDS | 45.0% | |
CACAAAGATGCACATCATGG+AGG | - | chr1_1:3463395-3463414 | Msa0001750:intron | 45.0% | |
CATGGAGGTAGACAATCAAG+TGG | - | chr1_1:3463410-3463429 | Msa0001750:intron | 45.0% | |
GGATCTCTCATTGAAAGTCG+AGG | - | chr1_1:3463712-3463731 | Msa0001750:CDS | 45.0% | |
! | ACAAGGAGTGAAGGCATAGT+TGG | + | chr1_1:3463785-3463804 | None:intergenic | 45.0% |
TCCTCACCATCAGGTAATCT+AGG | - | chr1_1:3463830-3463849 | Msa0001750:CDS | 45.0% | |
! | TCCTAGATTACCTGATGGTG+AGG | + | chr1_1:3463834-3463853 | None:intergenic | 45.0% |
CCTGTTCCTAGATTACCTGA+TGG | + | chr1_1:3463839-3463858 | None:intergenic | 45.0% | |
CCATCAGGTAATCTAGGAAC+AGG | - | chr1_1:3463836-3463855 | Msa0001750:CDS | 45.0% | |
GTAATCTAGGAACAGGTACG+AGG | - | chr1_1:3463843-3463862 | Msa0001750:CDS | 45.0% | |
ATACAGTTTCCCGTAATGCC+CGG | + | chr1_1:3463874-3463893 | None:intergenic | 45.0% | |
!! | GAAAGCATTCGTCCTTCAAC+TGG | + | chr1_1:3463905-3463924 | None:intergenic | 45.0% |
! | GTAGCTGAAGTATCTGGTAG+AGG | + | chr1_1:3463944-3463963 | None:intergenic | 45.0% |
TGGTGGTTATGAGAGCTCAA+TGG | - | chr1_1:3463994-3464013 | Msa0001750:CDS | 45.0% | |
!! | GCAGTATATGTTGGGTTGAG+AGG | + | chr1_1:3464063-3464082 | None:intergenic | 45.0% |
CAACCCAACATATACTGCCA+AGG | - | chr1_1:3464065-3464084 | Msa0001750:CDS | 45.0% | |
CCTCCTTGGCAGTATATGTT+GGG | + | chr1_1:3464071-3464090 | None:intergenic | 45.0% | |
TCCTCCTTGGCAGTATATGT+TGG | + | chr1_1:3464072-3464091 | None:intergenic | 45.0% | |
AACATATACTGCCAAGGAGG+AGG | - | chr1_1:3464071-3464090 | Msa0001750:CDS | 45.0% | |
AAGATGACAATCCTCCTCCT+TGG | + | chr1_1:3464085-3464104 | None:intergenic | 45.0% | |
GATTGTCATCTTCAGCACCA+TGG | - | chr1_1:3464093-3464112 | Msa0001750:CDS | 45.0% | |
!! | GCATTACTGCCTTCAAGTTG+TGG | + | chr1_1:3464349-3464368 | None:intergenic | 45.0% |
TGTATGCAGACTATCCATCG+GGG | - | chr1_1:3464567-3464586 | Msa0001750:CDS | 45.0% | |
GCAGGATTAGGAGATGTAAG+TGG | - | chr1_1:3464679-3464698 | Msa0001750:CDS | 45.0% | |
GGTTCCATTCTATATGGTGG+TGG | - | chr1_1:3464700-3464719 | Msa0001750:CDS | 45.0% | |
!! | ATATGGTGGTGGTTCTGCAT+TGG | - | chr1_1:3464711-3464730 | Msa0001750:CDS | 45.0% |
!! | TATGGTGGTGGTTCTGCATT+GGG | - | chr1_1:3464712-3464731 | Msa0001750:CDS | 45.0% |
AATATGGAGTCTAATGGCGG+TGG | - | chr1_1:3464784-3464803 | Msa0001750:CDS | 45.0% | |
GAGCCGCAAATAAAAGGCAA+AGG | - | chr1_1:3464806-3464825 | Msa0001750:CDS | 45.0% | |
GCTAATTCTGCAGGACTGTA+CGG | + | chr1_1:3464835-3464854 | None:intergenic | 45.0% | |
GGTGGGCCTATATTGCTAAA+TGG | - | chr1_1:3464864-3464883 | Msa0001750:CDS | 45.0% | |
!! | TGTTTGTTGTGTCACAGGTG+AGG | - | chr1_1:3464933-3464952 | Msa0001750:CDS | 45.0% |
!! | GTTTGTTGTGTCACAGGTGA+GGG | - | chr1_1:3464934-3464953 | Msa0001750:CDS | 45.0% |
AGAGAGCTTCACCAGATCTA+AGG | + | chr1_1:3464985-3465004 | None:intergenic | 45.0% | |
CATGTCACTCGTCTGATTCA+AGG | - | chr1_1:3465031-3465050 | Msa0001750:CDS | 45.0% | |
!! | ACTGAACTAGGGCTTGTTGA+AGG | + | chr1_1:3465069-3465088 | None:intergenic | 45.0% |
TACACTGGTACAGATGGTAG+GGG | - | chr1_1:3465301-3465320 | Msa0001750:intron | 45.0% | |
CAGACTCCTTATAGTAGCTC+GGG | + | chr1_1:3465366-3465385 | None:intergenic | 45.0% | |
AGTCATTGGTCAGGACCATA+AGG | + | chr1_1:3465657-3465676 | None:intergenic | 45.0% | |
TGGTCCTGACCAATGACTAA+TGG | - | chr1_1:3465659-3465678 | Msa0001750:intron | 45.0% | |
GGTCCTGACCAATGACTAAT+GGG | - | chr1_1:3465660-3465679 | Msa0001750:intron | 45.0% | |
CAAACACACTCTCCTATTGC+AGG | - | chr1_1:3465798-3465817 | Msa0001750:intron | 45.0% | |
AAGTGCTTGTTCTCTGACTG+TGG | + | chr1_1:3465909-3465928 | None:intergenic | 45.0% | |
AGTGCTTTGCGGTCTCTTAA+AGG | - | chr1_1:3465962-3465981 | Msa0001750:intron | 45.0% | |
!! | AAGGAATTTGGCTCTCCCAT+TGG | - | chr1_1:3465998-3466017 | Msa0001750:intron | 45.0% |
GGAAAATTCTGTCGGGTGAT+TGG | + | chr1_1:3466096-3466115 | None:intergenic | 45.0% | |
ACTGCAACAACTTCTCCGAT+GGG | - | chr1_1:3466448-3466467 | Msa0001750:intron | 45.0% | |
TGCTCATGCATTGCTAAGAC+TGG | - | chr1_1:3466561-3466580 | Msa0001750:intron | 45.0% | |
ATTGACCTCTGCTCAAGAGT+AGG | + | chr1_1:3466613-3466632 | None:intergenic | 45.0% | |
CTGTTAAGATCCCACATTGG+CGG | - | chr1_1:3466846-3466865 | Msa0001750:intron | 45.0% | |
TGTTAAGATCCCACATTGGC+GGG | - | chr1_1:3466847-3466866 | Msa0001750:intron | 45.0% | |
! | GGCCAAAGTACTCCTTGTAA+TGG | - | chr1_1:3466875-3466894 | Msa0001750:intron | 45.0% |
!! | CCCCGTTGAATTAGCTTTAG+TGG | - | chr1_1:3466912-3466931 | Msa0001750:intron | 45.0% |
ACATAAGGATTCGCGATTCG+GGG | + | chr1_1:3467158-3467177 | None:intergenic | 45.0% | |
AGAGGTCTGATGTGGAAAAG+GGG | + | chr1_1:3467303-3467322 | None:intergenic | 45.0% | |
GTAGAGGTCTGATGTGGAAA+AGG | + | chr1_1:3467305-3467324 | None:intergenic | 45.0% | |
CAAGCAAGCCGAAACTATTC+AGG | + | chr1_1:3467359-3467378 | None:intergenic | 45.0% | |
! | ATAGTTTCGGCTTGCTTGCA+TGG | - | chr1_1:3467361-3467380 | Msa0001750:intron | 45.0% |
TGCAACAAATAGCGATGGGT+TGG | - | chr1_1:3467458-3467477 | Msa0001750:intron | 45.0% | |
ATCTAGTAATCCAGTGTCGC+TGG | + | chr1_1:3467502-3467521 | None:intergenic | 45.0% | |
!! | AAGGGAAGCTTGCTGTTCTT+CGG | - | chr1_1:3467529-3467548 | Msa0001750:intron | 45.0% |
GCTGTGTAAAACCTCAGAAC+TGG | + | chr1_1:3467595-3467614 | None:intergenic | 45.0% | |
ATTGGCATCAACAGTTGGAC+TGG | + | chr1_1:3467655-3467674 | None:intergenic | 45.0% | |
TGTTCCCTTTAAACTCTGGG+AGG | - | chr1_1:3467755-3467774 | Msa0001750:CDS | 45.0% | |
!! | TCTCTTTCTGGCTGTATGTG+TGG | - | chr1_1:3467786-3467805 | Msa0001750:CDS | 45.0% |
!! | CTCTTTCTGGCTGTATGTGT+GGG | - | chr1_1:3467787-3467806 | Msa0001750:CDS | 45.0% |
GTTTGGTTGAGGGAAAGGAT+AGG | - | chr1_1:3467968-3467987 | Msa0001750:intron | 45.0% | |
TAGCAAAGTACAGCATCTCC+AGG | + | chr1_1:3468315-3468334 | None:intergenic | 45.0% | |
GTAGCATTGTCAGAGAGACA+TGG | - | chr1_1:3468356-3468375 | Msa0001750:intron | 45.0% | |
! | GATCAAGCTATTTCAGGAGG+TGG | - | chr1_1:3468391-3468410 | Msa0001750:intron | 45.0% |
TGCTCTGTGCTAAAGAGACT+TGG | - | chr1_1:3468427-3468446 | Msa0001750:intron | 45.0% | |
GCTCTGTGCTAAAGAGACTT+GGG | - | chr1_1:3468428-3468447 | Msa0001750:intron | 45.0% | |
TTCCATCACCAGGATAAAGG+CGG | + | chr1_1:3468456-3468475 | None:intergenic | 45.0% | |
CAGTTCCATCACCAGGATAA+AGG | + | chr1_1:3468459-3468478 | None:intergenic | 45.0% | |
ATACCAGTGCAGCTTTCTCA+AGG | + | chr1_1:3468510-3468529 | None:intergenic | 45.0% | |
GAGTATCTTTCAGTTTGGGC+AGG | - | chr1_1:3468608-3468627 | Msa0001750:CDS | 45.0% | |
TATCTTTCAGTTTGGGCAGG+CGG | - | chr1_1:3468611-3468630 | Msa0001750:CDS | 45.0% | |
CGCAACATCTTCATCTCCAA+CGG | + | chr1_1:3468718-3468737 | None:intergenic | 45.0% | |
!! | AGCCCTTGTTTCTGCTTGTA+AGG | - | chr1_1:3468740-3468759 | Msa0001750:intron | 45.0% |
!! | GCCCTTGTTTCTGCTTGTAA+GGG | - | chr1_1:3468741-3468760 | Msa0001750:intron | 45.0% |
CACCCTTACAAGCAGAAACA+AGG | + | chr1_1:3468746-3468765 | None:intergenic | 45.0% | |
GATGCTGAGATCTGTTCTAG+TGG | - | chr1_1:3468845-3468864 | Msa0001750:intron | 45.0% | |
TTCTAGTGGTACTTCGTGAG+TGG | - | chr1_1:3468859-3468878 | Msa0001750:intron | 45.0% | |
TCTAGTGGTACTTCGTGAGT+GGG | - | chr1_1:3468860-3468879 | Msa0001750:intron | 45.0% | |
! | AATAGGCGGTGGATTCTCAT+TGG | - | chr1_1:3468935-3468954 | Msa0001750:intron | 45.0% |
CAGTTGCTAGCCAAGGAATT+AGG | - | chr1_1:3468964-3468983 | Msa0001750:intron | 45.0% | |
GGTATATGACTGAAGTACGG+AGG | - | chr1_1:3469336-3469355 | Msa0001750:CDS | 45.0% | |
!! | TTCTGTTTGGCTCTGTGGAA+GGG | + | chr1_1:3469366-3469385 | None:intergenic | 45.0% |
TTCCACAGAGCCAAACAGAA+GGG | - | chr1_1:3469366-3469385 | Msa0001750:exon | 45.0% | |
!! | ATAAATTTATTCATTTATAA+AGG | + | chr1_1:3462332-3462351 | None:intergenic | 5.0% |
!! | AGAGTGGCGGGCAAAATTTC+CGG | + | chr1_1:3458769-3458788 | None:intergenic | 50.0% |
! | AACGGCGATGTAGGGTTTTG+GGG | + | chr1_1:3458809-3458828 | None:intergenic | 50.0% |
AGAGAGAGAGAGAGAGAGAG+CGG | + | chr1_1:3458916-3458935 | None:intergenic | 50.0% | |
TTCGCTACCTCAACCAAAGG+GGG | + | chr1_1:3459682-3459701 | None:intergenic | 50.0% | |
GAAAGATACAATGCGGCTGG+TGG | - | chr1_1:3459730-3459749 | Msa0001750:intron | 50.0% | |
AAGATACAATGCGGCTGGTG+GGG | - | chr1_1:3459732-3459751 | Msa0001750:intron | 50.0% | |
!!! | GGGGAAGGAACTGCTTTTTG+TGG | - | chr1_1:3459751-3459770 | Msa0001750:intron | 50.0% |
GTGTCCTGAATATAGTGGCG+AGG | - | chr1_1:3460487-3460506 | Msa0001750:intron | 50.0% | |
AGCAACCCCTGTTGAGGTAT+TGG | - | chr1_1:3460589-3460608 | Msa0001750:CDS | 50.0% | |
GATGGCCAATACCTCAACAG+GGG | + | chr1_1:3460597-3460616 | None:intergenic | 50.0% | |
TCCCAGGAACCTTTATACCC+AGG | + | chr1_1:3460811-3460830 | None:intergenic | 50.0% | |
!! | AAACCGGCTTGTGAGGTAAG+GGG | + | chr1_1:3461128-3461147 | None:intergenic | 50.0% |
!! | CAAAACCGGCTTGTGAGGTA+AGG | + | chr1_1:3461130-3461149 | None:intergenic | 50.0% |
!! | CCTTACAAAACCGGCTTGTG+AGG | + | chr1_1:3461135-3461154 | None:intergenic | 50.0% |
!! | CCTCACAAGCCGGTTTTGTA+AGG | - | chr1_1:3461132-3461151 | Msa0001750:intron | 50.0% |
GTTGGGCATGAGACATGCAT+TGG | - | chr1_1:3461250-3461269 | Msa0001750:intron | 50.0% | |
GAAGTTCGTCTTAGGTGGCT+TGG | - | chr1_1:3461690-3461709 | Msa0001750:intron | 50.0% | |
CCCTCTAGTGATAAAGGACC+TGG | - | chr1_1:3461908-3461927 | Msa0001750:intron | 50.0% | |
TTTAACGCAACACCGTGGAC+TGG | + | chr1_1:3462128-3462147 | None:intergenic | 50.0% | |
!! | AGTCCACGGTGTTGCGTTAA+AGG | - | chr1_1:3462127-3462146 | Msa0001750:CDS | 50.0% |
!! | GTCCACGGTGTTGCGTTAAA+GGG | - | chr1_1:3462128-3462147 | Msa0001750:CDS | 50.0% |
AACCCTTTAACGCAACACCG+TGG | + | chr1_1:3462133-3462152 | None:intergenic | 50.0% | |
GCTTGGCGGCAGCATTTAAA+TGG | - | chr1_1:3462293-3462312 | Msa0001750:CDS | 50.0% | |
GTAACGGTACTTCCCTTGCA+TGG | + | chr1_1:3462709-3462728 | None:intergenic | 50.0% | |
! | TTAGTTGGAGTGTGCTGCTC+TGG | - | chr1_1:3462756-3462775 | Msa0001750:intron | 50.0% |
TGGGGTTACGATGACAAGTG+TGG | - | chr1_1:3462851-3462870 | Msa0001750:CDS | 50.0% | |
CACGACCAGCAAGGAAAATG+CGG | + | chr1_1:3462893-3462912 | None:intergenic | 50.0% | |
CTATCCACCTCTCCTTCTAG+CGG | - | chr1_1:3463551-3463570 | Msa0001750:CDS | 50.0% | |
! | GGCTGGTGTTGAATCCATTC+AGG | + | chr1_1:3463580-3463599 | None:intergenic | 50.0% |
AGCAAGAGCCATGGTTCCAA+AGG | + | chr1_1:3463675-3463694 | None:intergenic | 50.0% | |
! | TTTGGAACCATGGCTCTTGC+TGG | - | chr1_1:3463674-3463693 | Msa0001750:CDS | 50.0% |
GAGGCAGCCTATTATTCTGC+TGG | - | chr1_1:3463731-3463750 | Msa0001750:CDS | 50.0% | |
TTGGAGGTGATGCATCCGAA+AGG | + | chr1_1:3463766-3463785 | None:intergenic | 50.0% | |
! | AGGAGTGAAGGCATAGTTGG+AGG | + | chr1_1:3463782-3463801 | None:intergenic | 50.0% |
TACAGTTTCCCGTAATGCCC+GGG | + | chr1_1:3463873-3463892 | None:intergenic | 50.0% | |
!! | GAATCATGTGAAAGGGCGTC+TGG | - | chr1_1:3464016-3464035 | Msa0001750:CDS | 50.0% |
CCCAACATATACTGCCAAGG+AGG | - | chr1_1:3464068-3464087 | Msa0001750:CDS | 50.0% | |
! | GAAGGCAGCTGAAGCTTTTG+AGG | - | chr1_1:3464303-3464322 | Msa0001750:CDS | 50.0% |
TGTGGCATGCCAACAAGTCT+TGG | + | chr1_1:3464331-3464350 | None:intergenic | 50.0% | |
GTTGGCATGCCACAACTTGA+AGG | - | chr1_1:3464337-3464356 | Msa0001750:CDS | 50.0% | |
TCAAGCACAAGAACTGCTGC+TGG | - | chr1_1:3464373-3464392 | Msa0001750:CDS | 50.0% | |
!! | TGCTGCTGGTGGATTTAGCA+TGG | - | chr1_1:3464387-3464406 | Msa0001750:CDS | 50.0% |
!! | GCTGCTGGTGGATTTAGCAT+GGG | - | chr1_1:3464388-3464407 | Msa0001750:CDS | 50.0% |
!!! | GAGGCTGAGCCTGTTTTTTC+AGG | - | chr1_1:3464424-3464443 | Msa0001750:CDS | 50.0% |
TCTAGAAGGAACCAGAGGAG+AGG | - | chr1_1:3464640-3464659 | Msa0001750:CDS | 50.0% | |
AACCAGAGGAGAGGACTCTA+TGG | - | chr1_1:3464649-3464668 | Msa0001750:CDS | 50.0% | |
AACCATAGAGTCCTCTCCTC+TGG | + | chr1_1:3464654-3464673 | None:intergenic | 50.0% | |
GGACTCTATGGTTGTGTAGC+AGG | - | chr1_1:3464661-3464680 | Msa0001750:CDS | 50.0% | |
TCCTGCAGAATTAGCTGCCA+TGG | - | chr1_1:3464840-3464859 | Msa0001750:CDS | 50.0% | |
TCCATGGCAGCTAATTCTGC+AGG | + | chr1_1:3464844-3464863 | None:intergenic | 50.0% | |
TGCAGAATTAGCTGCCATGG+AGG | - | chr1_1:3464843-3464862 | Msa0001750:CDS | 50.0% | |
AGAATTAGCTGCCATGGAGG+TGG | - | chr1_1:3464846-3464865 | Msa0001750:CDS | 50.0% | |
GAATTAGCTGCCATGGAGGT+GGG | - | chr1_1:3464847-3464866 | Msa0001750:CDS | 50.0% | |
TGAGGGCAATGGAGTGCATT+AGG | - | chr1_1:3464951-3464970 | Msa0001750:CDS | 50.0% | |
AGGCAGTTGCTCCTTAGATC+TGG | - | chr1_1:3464971-3464990 | Msa0001750:CDS | 50.0% | |
GTACGTAAGTCTGCAGACTC+TGG | + | chr1_1:3465499-3465518 | None:intergenic | 50.0% | |
TGGCCCATTAGTCATTGGTC+AGG | + | chr1_1:3465666-3465685 | None:intergenic | 50.0% | |
! | CTTACCTCTTCAGAAGGCAC+AGG | - | chr1_1:3465841-3465860 | Msa0001750:intron | 50.0% |
! | ATAGCCTGTGCCTTCTGAAG+AGG | + | chr1_1:3465848-3465867 | None:intergenic | 50.0% |
CTCTTAAAGGTGACCCCTCA+CGG | - | chr1_1:3465975-3465994 | Msa0001750:intron | 50.0% | |
AGCCAAATTCCTTCCGTGAG+GGG | + | chr1_1:3465991-3466010 | None:intergenic | 50.0% | |
GAGCCAAATTCCTTCCGTGA+GGG | + | chr1_1:3465992-3466011 | None:intergenic | 50.0% | |
AGAGCCAAATTCCTTCCGTG+AGG | + | chr1_1:3465993-3466012 | None:intergenic | 50.0% | |
GGACACCCAGCTGAACAATT+TGG | + | chr1_1:3466075-3466094 | None:intergenic | 50.0% | |
TGGTCGTACACCCATACATG+AGG | - | chr1_1:3466210-3466229 | Msa0001750:intron | 50.0% | |
CAGCACGAACCTAGCAGATA+GGG | + | chr1_1:3466426-3466445 | None:intergenic | 50.0% | |
ACAGCACGAACCTAGCAGAT+AGG | + | chr1_1:3466427-3466446 | None:intergenic | 50.0% | |
GACTGCAACAACTTCTCCGA+TGG | - | chr1_1:3466447-3466466 | Msa0001750:intron | 50.0% | |
AACTTCTCCGATGGGCCAAT+CGG | - | chr1_1:3466456-3466475 | Msa0001750:intron | 50.0% | |
CATGCATTGCTAAGACTGGC+CGG | - | chr1_1:3466565-3466584 | Msa0001750:intron | 50.0% | |
GTAGGAACTCCGTCAGTAGA+AGG | + | chr1_1:3466595-3466614 | None:intergenic | 50.0% | |
GAGTTCCTACTCTTGAGCAG+AGG | - | chr1_1:3466605-3466624 | Msa0001750:intron | 50.0% | |
! | ATCCCACATTGGCGGGTATT+TGG | - | chr1_1:3466854-3466873 | Msa0001750:intron | 50.0% |
GCATATGGCTTCCAGTTCTG+AGG | - | chr1_1:3467581-3467600 | Msa0001750:intron | 50.0% | |
GAGGGAAAGGATAGGGTACA+TGG | - | chr1_1:3467976-3467995 | Msa0001750:intron | 50.0% | |
CGAGACCGTGATGCTTCATT+TGG | + | chr1_1:3468146-3468165 | None:intergenic | 50.0% | |
GTATCTGCCACTGTTCTGCT+TGG | - | chr1_1:3468177-3468196 | Msa0001750:intron | 50.0% | |
TCCATCACCAGGATAAAGGC+GGG | + | chr1_1:3468455-3468474 | None:intergenic | 50.0% | |
TCACCTTGAGAAAGCTGCAC+TGG | - | chr1_1:3468504-3468523 | Msa0001750:CDS | 50.0% | |
ATCTTTCAGTTTGGGCAGGC+GGG | - | chr1_1:3468612-3468631 | Msa0001750:CDS | 50.0% | |
GAACGTACAGTTGCTAGCCA+AGG | - | chr1_1:3468957-3468976 | Msa0001750:intron | 50.0% | |
!! | CTTCTGTTTGGCTCTGTGGA+AGG | + | chr1_1:3469367-3469386 | None:intergenic | 50.0% |
CTTCCACAGAGCCAAACAGA+AGG | - | chr1_1:3469365-3469384 | Msa0001750:exon | 50.0% | |
TCCACAGAGCCAAACAGAAG+GGG | - | chr1_1:3469367-3469386 | Msa0001750:exon | 50.0% | |
CAAACAGAAGGGGTTTACCG+CGG | - | chr1_1:3469377-3469396 | Msa0001750:five_prime_UTR | 50.0% | |
CATGGACGTGTCATCTATGC+CGG | - | chr1_1:3469596-3469615 | Msa0001750:five_prime_UTR | 50.0% | |
GGAGAACTAGGCTCGAATGA+CGG | + | chr1_1:3469622-3469641 | None:intergenic | 50.0% | |
!!! | GCGATGTAGGGTTTTGGGGT+GGG | + | chr1_1:3458805-3458824 | None:intergenic | 55.0% |
CTCTCTCTCTCTCTCATCGG+TGG | - | chr1_1:3458942-3458961 | Msa0001750:CDS | 55.0% | |
TCTCTCTCTCTCATCGGTGG+TGG | - | chr1_1:3458945-3458964 | Msa0001750:CDS | 55.0% | |
!! | TCATCGGTGGTGGAATGTCG+TGG | - | chr1_1:3458955-3458974 | Msa0001750:CDS | 55.0% |
!! | CATCGGTGGTGGAATGTCGT+GGG | - | chr1_1:3458956-3458975 | Msa0001750:CDS | 55.0% |
ATTCGTGACGTCACCAACGC+TGG | - | chr1_1:3458993-3459012 | Msa0001750:intron | 55.0% | |
ACTGACAACGAGACCAGCGT+TGG | + | chr1_1:3459009-3459028 | None:intergenic | 55.0% | |
! | GTTGTTTCAGTGGCCCCCTT+TGG | - | chr1_1:3459666-3459685 | Msa0001750:intron | 55.0% |
GCCCATGCCCTACGTATTTC+AGG | + | chr1_1:3459784-3459803 | None:intergenic | 55.0% | |
CAGGACACTGACCATCCCTA+AGG | + | chr1_1:3460475-3460494 | None:intergenic | 55.0% | |
ACGGTACTTCCCTTGCATGG+AGG | + | chr1_1:3462706-3462725 | None:intergenic | 55.0% | |
GTCATCGTAACCCCATCGGA+TGG | + | chr1_1:3462846-3462865 | None:intergenic | 55.0% | |
! | AAGGGCCGCATTTTCCTTGC+TGG | - | chr1_1:3462885-3462904 | Msa0001750:CDS | 55.0% |
! | GTATGCGTCACTGCTGGTCT+AGG | - | chr1_1:3462975-3462994 | Msa0001750:CDS | 55.0% |
CGCTAGAAGGAGAGGTGGAT+AGG | + | chr1_1:3463553-3463572 | None:intergenic | 55.0% | |
CCATTCAGGCTTCCGCTAGA+AGG | + | chr1_1:3463566-3463585 | None:intergenic | 55.0% | |
CCTTCTAGCGGAAGCCTGAA+TGG | - | chr1_1:3463563-3463582 | Msa0001750:CDS | 55.0% | |
ACAGCTAGGCTTGTGATGGC+TGG | + | chr1_1:3463597-3463616 | None:intergenic | 55.0% | |
AACACGGCCTTCTCCTCCTT+GGG | - | chr1_1:3463631-3463650 | Msa0001750:CDS | 55.0% | |
CTAACACCCCAAGGAGGAGA+AGG | + | chr1_1:3463641-3463660 | None:intergenic | 55.0% | |
! | TCTCCTCCTTGGGGTGTTAG+TGG | - | chr1_1:3463641-3463660 | Msa0001750:CDS | 55.0% |
GTTAGTGGCGGTCTCACCTT+TGG | - | chr1_1:3463656-3463675 | Msa0001750:CDS | 55.0% | |
!! | CGGTCTCACCTTTGGAACCA+TGG | - | chr1_1:3463664-3463683 | Msa0001750:CDS | 55.0% |
AGCACTCAGTCCTCACCATC+AGG | - | chr1_1:3463821-3463840 | Msa0001750:CDS | 55.0% | |
GAACAGGTACGAGGAGTTCC+CGG | - | chr1_1:3463852-3463871 | Msa0001750:CDS | 55.0% | |
AACAGGTACGAGGAGTTCCC+GGG | - | chr1_1:3463853-3463872 | Msa0001750:CDS | 55.0% | |
!! | AAAGGGCGTCTGGCAAACTG+TGG | - | chr1_1:3464026-3464045 | Msa0001750:CDS | 55.0% |
!! | AAGGGCGTCTGGCAAACTGT+GGG | - | chr1_1:3464027-3464046 | Msa0001750:CDS | 55.0% |
TCTGGCAAACTGTGGGCAAG+AGG | - | chr1_1:3464034-3464053 | Msa0001750:CDS | 55.0% | |
CTTCAGCACCATGGGCATGA+TGG | - | chr1_1:3464102-3464121 | Msa0001750:CDS | 55.0% | |
AGCACAAGAACTGCTGCTGG+TGG | - | chr1_1:3464376-3464395 | Msa0001750:CDS | 55.0% | |
!! | TGGTGGATTTAGCATGGGCC+AGG | - | chr1_1:3464393-3464412 | Msa0001750:CDS | 55.0% |
TAGCATGGGCCAGGTTGTTC+AGG | - | chr1_1:3464402-3464421 | Msa0001750:CDS | 55.0% | |
AAGGACTTGCATAGCCCCGA+TGG | + | chr1_1:3464584-3464603 | None:intergenic | 55.0% | |
GCGGTGGAGCCGCAAATAAA+AGG | - | chr1_1:3464800-3464819 | Msa0001750:CDS | 55.0% | |
GCAATATAGGCCCACCTCCA+TGG | + | chr1_1:3464860-3464879 | None:intergenic | 55.0% | |
TGTGTCACAGGTGAGGGCAA+TGG | - | chr1_1:3464940-3464959 | Msa0001750:CDS | 55.0% | |
AGGGTGACCGTCTTGCTACA+AGG | - | chr1_1:3465119-3465138 | Msa0001750:intron | 55.0% | |
GGGTTGCCCGAGCTACTATA+AGG | - | chr1_1:3465357-3465376 | Msa0001750:CDS | 55.0% | |
AGTCACAGCAGCTCTCTCCA+GGG | + | chr1_1:3465416-3465435 | None:intergenic | 55.0% | |
TAGTCACAGCAGCTCTCTCC+AGG | + | chr1_1:3465417-3465436 | None:intergenic | 55.0% | |
AGGAAAAGGAGACTCTCGCG+CGG | - | chr1_1:3465446-3465465 | Msa0001750:CDS | 55.0% | |
CACAGAAATGGAGAAGGGCC+AGG | + | chr1_1:3465565-3465584 | None:intergenic | 55.0% | |
TAAAGGTGACCCCTCACGGA+AGG | - | chr1_1:3465979-3465998 | Msa0001750:intron | 55.0% | |
GACCCCTCACGGAAGGAATT+TGG | - | chr1_1:3465986-3466005 | Msa0001750:intron | 55.0% | |
CTGCACTTGATCCAGCCTCT+CGG | - | chr1_1:3466035-3466054 | Msa0001750:intron | 55.0% | |
ACTTCTCCGATGGGCCAATC+GGG | - | chr1_1:3466457-3466476 | Msa0001750:intron | 55.0% | |
ACGACATAGGTGCTCCCGAT+TGG | + | chr1_1:3466474-3466493 | None:intergenic | 55.0% | |
! | CATTGCTAAGACTGGCCGGA+AGG | - | chr1_1:3466569-3466588 | Msa0001750:intron | 55.0% |
TCCGTCAGTAGAAGGCCTTC+CGG | + | chr1_1:3466587-3466606 | None:intergenic | 55.0% | |
GGCCAAATACCCGCCAATGT+GGG | + | chr1_1:3466859-3466878 | None:intergenic | 55.0% | |
TGGCCAAATACCCGCCAATG+TGG | + | chr1_1:3466860-3466879 | None:intergenic | 55.0% | |
CCATCACCAGGATAAAGGCG+GGG | + | chr1_1:3468454-3468473 | None:intergenic | 55.0% | |
TCTTTCAGTTTGGGCAGGCG+GGG | - | chr1_1:3468613-3468632 | Msa0001750:CDS | 55.0% | |
!! | ACCCCTTCTGTTTGGCTCTG+TGG | + | chr1_1:3469371-3469390 | None:intergenic | 55.0% |
CGCGGTAAACCCCTTCTGTT+TGG | + | chr1_1:3469379-3469398 | None:intergenic | 55.0% | |
CGGCATAGATGACACGTCCA+TGG | + | chr1_1:3469598-3469617 | None:intergenic | 55.0% | |
AACTAGGCTCGAATGACGGC+CGG | + | chr1_1:3469618-3469637 | None:intergenic | 55.0% | |
!!! | GGCGATGTAGGGTTTTGGGG+TGG | + | chr1_1:3458806-3458825 | None:intergenic | 60.0% |
GAGAGAGAGAGAGAGAGCGG+TGG | + | chr1_1:3458913-3458932 | None:intergenic | 60.0% | |
TCAGTGGCCCCCTTTGGTTG+AGG | - | chr1_1:3459672-3459691 | Msa0001750:intron | 60.0% | |
TACAATGCGGCTGGTGGGGA+AGG | - | chr1_1:3459736-3459755 | Msa0001750:intron | 60.0% | |
GCACCCCTTACCTCACAAGC+CGG | - | chr1_1:3461122-3461141 | Msa0001750:intron | 60.0% | |
! | GTTGGAGTGTGCTGCTCTGG+AGG | - | chr1_1:3462759-3462778 | Msa0001750:intron | 60.0% |
!! | TGCTGCTCTGGAGGAGCAGA+TGG | - | chr1_1:3462768-3462787 | Msa0001750:intron | 60.0% |
TGTGGCCATCACGACCAGCA+AGG | + | chr1_1:3462902-3462921 | None:intergenic | 60.0% | |
GCTTCCGCTAGAAGGAGAGG+TGG | + | chr1_1:3463558-3463577 | None:intergenic | 60.0% | |
CAGGCTTCCGCTAGAAGGAG+AGG | + | chr1_1:3463561-3463580 | None:intergenic | 60.0% | |
CAACACGGCCTTCTCCTCCT+TGG | - | chr1_1:3463630-3463649 | Msa0001750:CDS | 60.0% | |
ACACGGCCTTCTCCTCCTTG+GGG | - | chr1_1:3463632-3463651 | Msa0001750:CDS | 60.0% | |
! | CCTCCTTGGGGTGTTAGTGG+CGG | - | chr1_1:3463644-3463663 | Msa0001750:CDS | 60.0% |
AGACCGCCACTAACACCCCA+AGG | + | chr1_1:3463650-3463669 | None:intergenic | 60.0% | |
CGAGGAGTTCCCGGGCATTA+CGG | - | chr1_1:3463861-3463880 | Msa0001750:CDS | 60.0% | |
GAGGAGTTCCCGGGCATTAC+GGG | - | chr1_1:3463862-3463881 | Msa0001750:CDS | 60.0% | |
!!! | CAATCGTTTTGGAGCCGGCG+AGG | - | chr1_1:3464207-3464226 | Msa0001750:CDS | 60.0% |
CATGGGCCAGGTTGTTCAGG+AGG | - | chr1_1:3464405-3464424 | Msa0001750:CDS | 60.0% | |
GCTCAGCCTCCTGAACAACC+TGG | + | chr1_1:3464414-3464433 | None:intergenic | 60.0% | |
! | GGTGGTTCTGCATTGGGTGC+TGG | - | chr1_1:3464718-3464737 | Msa0001750:CDS | 60.0% |
!! | GGGTGCTGGTGACCGAAGTA+TGG | - | chr1_1:3464732-3464751 | Msa0001750:CDS | 60.0% |
CTTCTTAGCCGTGGAAGCCC+TGG | - | chr1_1:3465396-3465415 | Msa0001750:CDS | 60.0% | |
AGCTCTCTCCAGGGCTTCCA+CGG | + | chr1_1:3465407-3465426 | None:intergenic | 60.0% | |
GGAAAAGGAGACTCTCGCGC+GGG | - | chr1_1:3465447-3465466 | Msa0001750:CDS | 60.0% | |
GCCGGAAGGCCTTCTACTGA+CGG | - | chr1_1:3466583-3466602 | Msa0001750:intron | 60.0% | |
ACTCGGAGTTCCAGCGACAC+TGG | - | chr1_1:3467489-3467508 | Msa0001750:intron | 60.0% | |
CTGCCACTGTTCTGCTTGGC+CGG | - | chr1_1:3468181-3468200 | Msa0001750:intron | 60.0% | |
AGACCGGCCAAGCAGAACAG+TGG | + | chr1_1:3468187-3468206 | None:intergenic | 60.0% | |
CTGTTCTGCTTGGCCGGTCT+TGG | - | chr1_1:3468187-3468206 | Msa0001750:intron | 60.0% | |
CCCCGCCTTTATCCTGGTGA+TGG | - | chr1_1:3468451-3468470 | Msa0001750:intron | 60.0% | |
CACAGGATGGGTACAGCCAC+TGG | - | chr1_1:3468900-3468919 | Msa0001750:intron | 60.0% | |
CCGCCACTAACACCCCAAGG+AGG | + | chr1_1:3463647-3463666 | None:intergenic | 65.0% | |
!!! | TCGTTTTGGAGCCGGCGAGG+CGG | - | chr1_1:3464210-3464229 | Msa0001750:CDS | 65.0% |
AAAGGAGACTCTCGCGCGGG+AGG | - | chr1_1:3465450-3465469 | Msa0001750:CDS | 65.0% | |
GCACAGGCTATCGACCCTGC+AGG | - | chr1_1:3465857-3465876 | Msa0001750:intron | 65.0% | |
! | GGTGCTCCCGATTGGCCCAT+CGG | + | chr1_1:3466466-3466485 | None:intergenic | 65.0% |
CTTGGGCCCCGCCTTTATCC+TGG | - | chr1_1:3468445-3468464 | Msa0001750:intron | 65.0% | |
CAGTTTGGGCAGGCGGGGTT+TGG | - | chr1_1:3468618-3468637 | Msa0001750:CDS | 65.0% | |
ACACATCGCAGCCGCCTCGC+CGG | + | chr1_1:3464224-3464243 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_1 | gene | 3458702 | 3469642 | 3458702 | ID=Msa0001750;Name=Msa0001750 |
chr1_1 | mRNA | 3458702 | 3469642 | 3458702 | ID=Msa0001750-mRNA-1;Parent=Msa0001750;Name=Msa0001750-mRNA-1;_AED=0.05;_eAED=0.05;_QI=237|0.92|0.92|1|0.92|0.85|14|188|1499 |
chr1_1 | exon | 3458702 | 3459007 | 3458702 | ID=Msa0001750-mRNA-1:exon:979;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3459332 | 3459654 | 3459332 | ID=Msa0001750-mRNA-1:exon:978;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3459819 | 3460037 | 3459819 | ID=Msa0001750-mRNA-1:exon:977;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3460568 | 3460925 | 3460568 | ID=Msa0001750-mRNA-1:exon:976;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3461718 | 3461908 | 3461718 | ID=Msa0001750-mRNA-1:exon:975;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3462113 | 3462524 | 3462113 | ID=Msa0001750-mRNA-1:exon:974;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3462799 | 3463046 | 3462799 | ID=Msa0001750-mRNA-1:exon:973;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3463182 | 3463394 | 3463182 | ID=Msa0001750-mRNA-1:exon:972;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3463480 | 3465130 | 3463480 | ID=Msa0001750-mRNA-1:exon:971;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3465332 | 3465642 | 3465332 | ID=Msa0001750-mRNA-1:exon:970;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3467740 | 3467866 | 3467740 | ID=Msa0001750-mRNA-1:exon:969;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3468499 | 3468668 | 3468499 | ID=Msa0001750-mRNA-1:exon:968;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3469217 | 3469398 | 3469217 | ID=Msa0001750-mRNA-1:exon:967;Parent=Msa0001750-mRNA-1 |
chr1_1 | exon | 3469429 | 3469642 | 3469429 | ID=Msa0001750-mRNA-1:exon:966;Parent=Msa0001750-mRNA-1 |
chr1_1 | five_prime_UTR | 3469429 | 3469642 | 3469429 | ID=Msa0001750-mRNA-1:five_prime_utr;Parent=Msa0001750-mRNA-1 |
chr1_1 | five_prime_UTR | 3469376 | 3469398 | 3469376 | ID=Msa0001750-mRNA-1:five_prime_utr;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3469217 | 3469375 | 3469217 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3468499 | 3468668 | 3468499 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3467740 | 3467866 | 3467740 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3465332 | 3465642 | 3465332 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3463480 | 3465130 | 3463480 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3463182 | 3463394 | 3463182 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3462799 | 3463046 | 3462799 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3462113 | 3462524 | 3462113 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3461718 | 3461908 | 3461718 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3460568 | 3460925 | 3460568 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3459819 | 3460037 | 3459819 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3459332 | 3459654 | 3459332 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | CDS | 3458890 | 3459007 | 3458890 | ID=Msa0001750-mRNA-1:cds;Parent=Msa0001750-mRNA-1 |
chr1_1 | three_prime_UTR | 3458702 | 3458889 | 3458702 | ID=Msa0001750-mRNA-1:three_prime_utr;Parent=Msa0001750-mRNA-1 |
Gene Sequence |
Protein sequence |