Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0016180 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016180 | Msa0067900 | 0.883547 | 4.092075e-71 | -8.615850e-47 |
| Msa0016180 | Msa0159290 | 0.861710 | 8.474879e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016180 | MtrunA17_Chr1g0163201 | 71.123 | 374 | 57 | 5 | 38 | 360 | 11 | 384 | 5.88e-174 | 496 |
| Msa0016180 | MtrunA17_Chr1g0163201 | 65.054 | 186 | 45 | 5 | 367 | 537 | 62 | 242 | 8.35e-56 | 192 |
| Msa0016180 | MtrunA17_Chr1g0163181 | 60.448 | 402 | 69 | 7 | 45 | 358 | 20 | 419 | 1.35e-149 | 436 |
| Msa0016180 | MtrunA17_Chr1g0163181 | 65.445 | 191 | 42 | 6 | 367 | 537 | 64 | 250 | 1.04e-64 | 217 |
| Msa0016180 | MtrunA17_Chr1g0163151 | 73.488 | 215 | 47 | 3 | 154 | 360 | 1 | 213 | 1.75e-106 | 318 |
| Msa0016180 | MtrunA17_Chr1g0163151 | 77.465 | 71 | 16 | 0 | 467 | 537 | 1 | 71 | 4.48e-30 | 117 |
| Msa0016180 | MtrunA17_Chr1g0163111 | 66.234 | 231 | 43 | 5 | 154 | 360 | 1 | 220 | 7.94e-97 | 293 |
| Msa0016180 | MtrunA17_Chr1g0163111 | 81.690 | 71 | 10 | 1 | 467 | 537 | 1 | 68 | 3.67e-29 | 115 |
| Msa0016180 | MtrunA17_Chr1g0163251 | 43.403 | 288 | 86 | 7 | 45 | 272 | 20 | 290 | 1.98e-57 | 196 |
| Msa0016180 | MtrunA17_Chr1g0163251 | 35.938 | 192 | 78 | 4 | 367 | 534 | 64 | 234 | 1.91e-23 | 102 |
| Msa0016180 | MtrunA17_Chr1g0163231 | 38.321 | 274 | 103 | 7 | 42 | 263 | 21 | 280 | 2.47e-44 | 159 |
| Msa0016180 | MtrunA17_Chr1g0163231 | 34.921 | 189 | 87 | 7 | 362 | 534 | 63 | 231 | 1.09e-19 | 89.7 |
| Msa0016180 | MtrunA17_Chr1g0163261 | 35.088 | 285 | 121 | 5 | 41 | 272 | 20 | 293 | 2.00e-42 | 154 |
| Msa0016180 | MtrunA17_Chr1g0163261 | 37.500 | 160 | 77 | 3 | 385 | 535 | 93 | 238 | 1.73e-20 | 92.0 |
| Msa0016180 | MtrunA17_Chr1g0171611 | 37.638 | 271 | 99 | 8 | 41 | 263 | 20 | 268 | 7.61e-38 | 140 |
| Msa0016180 | MtrunA17_Chr1g0171611 | 32.105 | 190 | 78 | 6 | 362 | 534 | 64 | 219 | 8.55e-15 | 75.1 |
| Msa0016180 | MtrunA17_Chr6g0476171 | 40.385 | 208 | 97 | 8 | 170 | 357 | 34 | 234 | 1.11e-35 | 134 |
| Msa0016180 | MtrunA17_Chr1g0162151 | 36.866 | 217 | 109 | 5 | 154 | 360 | 1 | 199 | 2.85e-31 | 120 |
| Msa0016180 | MtrunA17_Chr1g0163191 | 55.319 | 141 | 25 | 2 | 45 | 148 | 20 | 159 | 2.26e-27 | 108 |
| Msa0016180 | MtrunA17_Chr1g0163191 | 49.020 | 102 | 38 | 3 | 367 | 461 | 64 | 158 | 3.75e-14 | 70.5 |
| Msa0016180 | MtrunA17_Chr1g0163091 | 39.161 | 143 | 76 | 3 | 154 | 286 | 1 | 142 | 2.71e-25 | 102 |
| Msa0016180 | MtrunA17_Chr1g0163091 | 43.421 | 76 | 37 | 2 | 467 | 536 | 1 | 76 | 1.59e-12 | 65.9 |
| Msa0016180 | MtrunA17_Chr1g0163241 | 47.482 | 139 | 23 | 4 | 45 | 145 | 22 | 148 | 3.57e-23 | 96.3 |
| Msa0016180 | MtrunA17_Chr1g0163221 | 25.137 | 366 | 185 | 13 | 46 | 362 | 27 | 352 | 5.37e-16 | 79.7 |
| Msa0016180 | MtrunA17_Chr7g0233561 | 25.333 | 300 | 132 | 7 | 40 | 262 | 28 | 312 | 5.74e-16 | 79.3 |
| Msa0016180 | MtrunA17_Chr1g0163131 | 53.623 | 69 | 28 | 2 | 294 | 360 | 232 | 298 | 4.31e-15 | 76.3 |
| Msa0016180 | MtrunA17_Chr7g0233521 | 25.926 | 270 | 139 | 7 | 46 | 262 | 2 | 263 | 6.20e-15 | 75.5 |
| Msa0016180 | MtrunA17_Chr1g0208771 | 25.887 | 282 | 144 | 9 | 45 | 263 | 12 | 291 | 1.28e-13 | 73.2 |
| Msa0016180 | MtrunA17_Chr8g0390841 | 23.711 | 291 | 146 | 9 | 42 | 264 | 51 | 333 | 6.27e-12 | 68.2 |
| Msa0016180 | MtrunA17_Chr3g0103171 | 24.046 | 262 | 151 | 7 | 45 | 260 | 5 | 264 | 3.84e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 106 sgRNAs with CRISPR-Local
Find 656 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACACCGTTTGGAAATTTA+AGG | 0.151014 | 1_1:+26925393 | None:intergenic |
| CAACACCGTTTGGAAATTTA+AGG | 0.151014 | 1_1:+26931327 | None:intergenic |
| CTTTCGGATTGGGTCGTTTC+CGG | 0.165945 | 1_1:+26930329 | None:intergenic |
| CAAGCTCAAAGGACAATAAA+AGG | 0.217300 | 1_1:-26931002 | Msa0016180:CDS |
| TATTTCTCCACATATTTCTT+AGG | 0.222742 | 1_1:+26925443 | None:intergenic |
| AAATATTGTGGAGTTGAAAA+TGG | 0.256652 | 1_1:-26929831 | Msa0016180:CDS |
| TTAATGGAACTGCAACAATA+AGG | 0.277244 | 1_1:-26924399 | Msa0016180:CDS |
| TATTTCTCCACATATATCTT+AGG | 0.281171 | 1_1:+26931377 | None:intergenic |
| AGAAATATGTGGAGAAATAT+TGG | 0.283749 | 1_1:-26925439 | Msa0016180:CDS |
| GAAGCATACATTCAAGGTTT+TGG | 0.302239 | 1_1:-26930001 | Msa0016180:CDS |
| TTTGGAAATTTAAGGAATAT+AGG | 0.302976 | 1_1:+26925401 | None:intergenic |
| TTTGGAAATTTAAGGAATAT+AGG | 0.302976 | 1_1:+26931335 | None:intergenic |
| TTCATCAACAGATTTGATAT+TGG | 0.305884 | 1_1:+26925202 | None:intergenic |
| TTACACCAATGGCTATTTCT+TGG | 0.306445 | 1_1:-26924538 | Msa0016180:intron |
| TTACACCAATGGCTATTTCT+TGG | 0.306445 | 1_1:-26930669 | Msa0016180:intron |
| TTAAAGGGACTGCAACAATA+AGG | 0.310666 | 1_1:-26930530 | Msa0016180:CDS |
| CATTAACAGCTTCAGATGTT+AGG | 0.318603 | 1_1:+26924595 | None:intergenic |
| AAGGAGTGTGGAGGTGAGTT+TGG | 0.320864 | 1_1:-26924365 | Msa0016180:CDS |
| AGATATATGTGGAGAAATAT+TGG | 0.326941 | 1_1:-26931373 | Msa0016180:CDS |
| CTAGTAATTTCTTTCGGATT+GGG | 0.342779 | 1_1:+26930319 | None:intergenic |
| TTGGAAATTTAAGGAATATA+GGG | 0.346499 | 1_1:+26925402 | None:intergenic |
| TTGGAAATTTAAGGAATATA+GGG | 0.346499 | 1_1:+26931336 | None:intergenic |
| GAGGTGGTTGGAAAATATTC+AGG | 0.364157 | 1_1:-26930440 | Msa0016180:CDS |
| TAAAACCTAGTAATTTCTTT+CGG | 0.364235 | 1_1:+26930313 | None:intergenic |
| CCTAGTAATTTCTTTCGGAT+TGG | 0.373001 | 1_1:+26930318 | None:intergenic |
| TAATGGAACTGCAACAATAA+GGG | 0.376410 | 1_1:-26924398 | Msa0016180:CDS |
| AAATGCCAAACCAAGCTAAA+AGG | 0.394610 | 1_1:-26925061 | Msa0016180:CDS |
| CCAATCCGAAAGAAATTACT+AGG | 0.396990 | 1_1:-26930318 | Msa0016180:intron |
| ATAATTTATTTCTAAAGTAT+TGG | 0.398912 | 1_1:+26925226 | None:intergenic |
| TACCGAATTGCCGCTGAGCT+TGG | 0.400116 | 1_1:+26932624 | None:intergenic |
| ATAGTTTATTTCTAAAGTAT+TGG | 0.406626 | 1_1:+26931160 | None:intergenic |
| TAAAGGGACTGCAACAATAA+GGG | 0.414381 | 1_1:-26930529 | Msa0016180:CDS |
| TTTGATGAAGCATACATTCA+AGG | 0.419004 | 1_1:-26930007 | Msa0016180:CDS |
| ACAGCTTCAGATTGTGCCAT+TGG | 0.421914 | 1_1:+26930731 | None:intergenic |
| CGCTGAAGATAGACTTCAAT+CGG | 0.432138 | 1_1:-26932725 | Msa0016180:CDS |
| GAGGTGAGTTTGGGATATTA+TGG | 0.442856 | 1_1:-26924355 | Msa0016180:CDS |
| CAAGCTAAAAGGACAAGAAA+TGG | 0.443867 | 1_1:-26925050 | Msa0016180:CDS |
| GAGCTTGGCTGAACTGCAAT+CGG | 0.449915 | 1_1:+26932639 | None:intergenic |
| AATATTGTGGAGTTGAAAAT+GGG | 0.451536 | 1_1:-26929830 | Msa0016180:CDS |
| CAAAGTAGCAATGGTGAAGA+AGG | 0.457353 | 1_1:-26924628 | Msa0016180:CDS |
| CAGCTTCAGATTGTGCCATT+GGG | 0.460205 | 1_1:+26930732 | None:intergenic |
| AAAGAATGCAATGTGGAGAT+TGG | 0.464528 | 1_1:-26929725 | Msa0016180:CDS |
| CAAAGTGGCCATGGTGAAGA+AGG | 0.465563 | 1_1:-26930765 | Msa0016180:CDS |
| TGTTCTCTTGAAAACTCAAA+TGG | 0.468009 | 1_1:+26930564 | None:intergenic |
| TGTCATTATAACTTCAAAAG+AGG | 0.475259 | 1_1:+26924566 | None:intergenic |
| TGTCATTATAACTTCAAAAG+AGG | 0.475259 | 1_1:+26930697 | None:intergenic |
| AGGAGTGTGGAGGTGAGTTT+GGG | 0.478218 | 1_1:-26924364 | Msa0016180:CDS |
| AGCCAAGCTCAGCGGCAATT+CGG | 0.488549 | 1_1:-26932626 | Msa0016180:intron |
| GGTGCTAAAGCCACTGAAGA+AGG | 0.489506 | 1_1:-26931113 | Msa0016180:CDS |
| GGAGTGTGGAAGTGAGTTTG+AGG | 0.490380 | 1_1:-26930494 | Msa0016180:intron |
| ATGAGAGTATTCGTGGCTGC+AGG | 0.493889 | 1_1:-26929775 | Msa0016180:CDS |
| CCAAAGGAGTTTATGAAAAG+AGG | 0.496159 | 1_1:-26929863 | Msa0016180:CDS |
| GTCATTATAACTTCAAAAGA+GGG | 0.507540 | 1_1:+26924567 | None:intergenic |
| GTCATTATAACTTCAAAAGA+GGG | 0.507540 | 1_1:+26930698 | None:intergenic |
| CGTGGCTGCAGGTTCAGTAA+AGG | 0.507598 | 1_1:-26929764 | Msa0016180:CDS |
| AATATCAAATCTGTTGATGA+AGG | 0.508408 | 1_1:-26925200 | Msa0016180:CDS |
| CAATAAGGGTTGGTAAAGAA+AGG | 0.509993 | 1_1:-26930515 | Msa0016180:CDS |
| AATTATTATGAGAGTATTCG+TGG | 0.512630 | 1_1:-26929782 | Msa0016180:CDS |
| ACTTTCTTTACCTTCTTCAG+TGG | 0.514754 | 1_1:+26931103 | None:intergenic |
| ATTGTCACTATTACTCGTGC+CGG | 0.525079 | 1_1:-26930348 | Msa0016180:CDS |
| AAGCTCAAAGGACAATAAAA+GGG | 0.530769 | 1_1:-26931001 | Msa0016180:CDS |
| AGGATGTCATGAAAATATTG+TGG | 0.531604 | 1_1:-26929843 | Msa0016180:CDS |
| ATAGTGACAATGAATGAAAA+CGG | 0.533216 | 1_1:+26930360 | None:intergenic |
| ATATTCCTTAAATTTCCAAA+CGG | 0.536219 | 1_1:-26925398 | Msa0016180:intron |
| ATATTCCTTAAATTTCCAAA+CGG | 0.536219 | 1_1:-26931332 | Msa0016180:CDS |
| AGCTGAAGACACAGAAGAAG+AGG | 0.546039 | 1_1:-26925177 | Msa0016180:CDS |
| CAATAAGGGTTGGTAATGAA+AGG | 0.551596 | 1_1:-26924384 | Msa0016180:CDS |
| GATCTTGTATGGGAGGTGGT+TGG | 0.551716 | 1_1:-26930452 | Msa0016180:CDS |
| AAAGTATAATTTGCAAGTTG+AGG | 0.553539 | 1_1:-26930415 | Msa0016180:CDS |
| TGTTCTCTTGAAAACTCACT+TGG | 0.555107 | 1_1:+26924433 | None:intergenic |
| AAAGGGAAGAGAAAATTCTC+AGG | 0.557828 | 1_1:-26930984 | Msa0016180:intron |
| TGAAAATGGGGAGGAAGTCA+TGG | 0.563749 | 1_1:-26929817 | Msa0016180:CDS |
| AAAAGATCTTGTATGGGAGG+TGG | 0.568049 | 1_1:-26930456 | Msa0016180:intron |
| TTTGGTGAAGAACACAGCCC+CGG | 0.573521 | 1_1:-26929983 | Msa0016180:intron |
| AACGACACTGCCATGTCTGT+TGG | 0.574077 | 1_1:+26932665 | None:intergenic |
| GCTGCAGGTTCAGTAAAGGT+TGG | 0.575963 | 1_1:-26929760 | Msa0016180:CDS |
| GGAACTGCAACAATAAGGGT+TGG | 0.581562 | 1_1:-26924394 | Msa0016180:CDS |
| AGGTAGTAACAAAGTGGCCA+TGG | 0.582904 | 1_1:-26930774 | Msa0016180:CDS |
| TGATGACAGTTCAGATGAGG+TGG | 0.583984 | 1_1:-26925084 | Msa0016180:CDS |
| GAGGGTTCCTAAGATATATG+TGG | 0.586451 | 1_1:-26931384 | Msa0016180:CDS |
| ACTTACCAAGAAATAGCCAT+TGG | 0.587587 | 1_1:+26924533 | None:intergenic |
| ACTTACCAAGAAATAGCCAT+TGG | 0.587587 | 1_1:+26930664 | None:intergenic |
| GTAAATTTGAGATGATTCAA+CGG | 0.588165 | 1_1:-26930386 | Msa0016180:CDS |
| GGGACTGCAACAATAAGGGT+TGG | 0.589089 | 1_1:-26930525 | Msa0016180:CDS |
| GTATTTGCAGAGTGCACCAA+AGG | 0.590998 | 1_1:-26929879 | Msa0016180:intron |
| GAGGGTTCCTAAGAAATATG+TGG | 0.594786 | 1_1:-26925450 | Msa0016180:CDS |
| GGTTGGTAAAGAAAGGAGTG+TGG | 0.602290 | 1_1:-26930508 | Msa0016180:CDS |
| AGGTAGTAACAAAGTAGCAA+TGG | 0.603454 | 1_1:-26924637 | Msa0016180:CDS |
| AGGTGGTTGGAAAATATTCA+GGG | 0.606836 | 1_1:-26930439 | Msa0016180:CDS |
| ATGACACAATCTTACACCAA+TGG | 0.609025 | 1_1:-26924549 | Msa0016180:CDS |
| ATGACACAATCTTACACCAA+TGG | 0.609025 | 1_1:-26930680 | Msa0016180:CDS |
| GGTTGGTAATGAAAGGAGTG+TGG | 0.615653 | 1_1:-26924377 | Msa0016180:CDS |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1_1:-26925434 | Msa0016180:CDS |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1_1:-26931368 | Msa0016180:CDS |
| AAATGTCAAAGCAAGCTCAA+AGG | 0.625671 | 1_1:-26931013 | Msa0016180:CDS |
| AAGTGATGAAGAGAGTGATG+AGG | 0.629681 | 1_1:-26931039 | Msa0016180:CDS |
| TTGTGGAGTTGAAAATGGGG+AGG | 0.632079 | 1_1:-26929826 | Msa0016180:CDS |
| GCTGAAGACACAGAAGAAGA+GGG | 0.643743 | 1_1:-26925176 | Msa0016180:CDS |
| CTTTACAGGTAGTAACAAAG+TGG | 0.648804 | 1_1:-26930780 | Msa0016180:intron |
| AAGTGATGACAGTTCAGATG+AGG | 0.649994 | 1_1:-26925087 | Msa0016180:CDS |
| TGGTAATGAAAGGAGTGTGG+AGG | 0.650568 | 1_1:-26924374 | Msa0016180:CDS |
| TCATCTTCATCCAACAGACA+TGG | 0.668320 | 1_1:-26932675 | Msa0016180:CDS |
| TGCAGTTCAGCCAAGCTCAG+CGG | 0.670925 | 1_1:-26932634 | Msa0016180:CDS |
| GAAGGCTAGAAAATACCCAA+TGG | 0.687317 | 1_1:-26930747 | Msa0016180:CDS |
| ATATTGTGGAGTTGAAAATG+GGG | 0.692849 | 1_1:-26929829 | Msa0016180:CDS |
| ATTCATGAAAGAATGCAATG+TGG | 0.699756 | 1_1:-26929732 | Msa0016180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTATATAAAAATA+TGG | - | chr1_1:26924594-26924613 | Msa0016180:CDS | 0.0% |
| !!! | TTTTATTTATATAAAAATAT+GGG | - | chr1_1:26924595-26924614 | Msa0016180:CDS | 0.0% |
| !!! | AAATAATTTAAAATTTTATT+AGG | - | chr1_1:26932331-26932350 | Msa0016180:intron | 0.0% |
| !!! | AGTGATTTATTTTTAAAAAA+TGG | + | chr1_1:26924452-26924471 | None:intergenic | 10.0% |
| !!! | TAAAATGTTGTATTTTTTTA+AGG | + | chr1_1:26925129-26925148 | None:intergenic | 10.0% |
| !! | TTCAACAATTATTAAAAAAA+GGG | - | chr1_1:26925771-26925790 | Msa0016180:intron | 10.0% |
| !!! | TAATGATTCAAAATTTTATA+GGG | + | chr1_1:26925874-26925893 | None:intergenic | 10.0% |
| !!! | ATGAATTTTTATATTTTTTG+CGG | - | chr1_1:26926029-26926048 | Msa0016180:intron | 10.0% |
| !! | ACAAAAAGTTATTTAAAAAT+AGG | - | chr1_1:26926151-26926170 | Msa0016180:intron | 10.0% |
| !! | CAAAAAGTTATTTAAAAATA+GGG | - | chr1_1:26926152-26926171 | Msa0016180:intron | 10.0% |
| !! | CAAAAAATTTCATATTTATA+AGG | - | chr1_1:26926242-26926261 | Msa0016180:intron | 10.0% |
| !!! | AACAAGATATATTTTATTTT+CGG | - | chr1_1:26926302-26926321 | Msa0016180:intron | 10.0% |
| !!! | ATAAAAATATGTGATTTTTT+TGG | - | chr1_1:26930022-26930041 | Msa0016180:intron | 10.0% |
| !!! | TGTATGTTATAATTTTTTTA+TGG | - | chr1_1:26930643-26930662 | Msa0016180:intron | 10.0% |
| !! | TAAACATATAATATATAGTT+AGG | + | chr1_1:26930753-26930772 | None:intergenic | 10.0% |
| !!! | ATCTATATTTTTTTTTTATC+TGG | + | chr1_1:26931735-26931754 | None:intergenic | 10.0% |
| !!! | ATTGTTTTTGAATTTATTTA+TGG | + | chr1_1:26932191-26932210 | None:intergenic | 10.0% |
| !!! | TTTTTTTATATAGTTTATGT+TGG | + | chr1_1:26934500-26934519 | None:intergenic | 10.0% |
| !!! | ATACTTCAATTATTTTTTAA+GGG | + | chr1_1:26934820-26934839 | None:intergenic | 10.0% |
| !!! | ATAATTTATTTCTAAAGTAT+TGG | + | chr1_1:26935681-26935700 | None:intergenic | 10.0% |
| !! | AAAAATACTAAATACTTAAT+TGG | - | chr1_1:26936174-26936193 | Msa0016180:intron | 10.0% |
| !! | ATTACTCATTTATTAGATTA+AGG | - | chr1_1:26924414-26924433 | Msa0016180:CDS | 15.0% |
| !!! | TTATATAAAAATATGGGTTA+TGG | - | chr1_1:26924601-26924620 | Msa0016180:CDS | 15.0% |
| !! | AAATCAACATAAGTATTAAA+GGG | + | chr1_1:26924873-26924892 | None:intergenic | 15.0% |
| !! | AAAATCAACATAAGTATTAA+AGG | + | chr1_1:26924874-26924893 | None:intergenic | 15.0% |
| !! | GTTCAACAATTATTAAAAAA+AGG | - | chr1_1:26925770-26925789 | Msa0016180:intron | 15.0% |
| !!! | GAAAAGTTGATATATTTATA+GGG | + | chr1_1:26925814-26925833 | None:intergenic | 15.0% |
| !!! | TGAAAAGTTGATATATTTAT+AGG | + | chr1_1:26925815-26925834 | None:intergenic | 15.0% |
| !!! | GTAATGATTCAAAATTTTAT+AGG | + | chr1_1:26925875-26925894 | None:intergenic | 15.0% |
| !! | GAAAAATGTGTAATATTATA+AGG | - | chr1_1:26925958-26925977 | Msa0016180:intron | 15.0% |
| !!! | TTCATATTTAATTCATGTTT+TGG | + | chr1_1:26926014-26926033 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr1_1:26926183-26926202 | Msa0016180:intron | 15.0% |
| !!! | ATATTTGGTTTATAAAACAT+TGG | - | chr1_1:26926340-26926359 | Msa0016180:intron | 15.0% |
| !!! | TATTTGGTTTATAAAACATT+GGG | - | chr1_1:26926341-26926360 | Msa0016180:intron | 15.0% |
| !! | TATTTCAAGGTTAAAATATT+TGG | - | chr1_1:26926426-26926445 | Msa0016180:intron | 15.0% |
| !! | AATAGTTTAATTCTAAATCT+TGG | + | chr1_1:26926454-26926473 | None:intergenic | 15.0% |
| !!! | TCCAATAATTTTATTTTGTT+GGG | + | chr1_1:26926893-26926912 | None:intergenic | 15.0% |
| !! | TGAAAATTATATACTATCTA+TGG | + | chr1_1:26927742-26927761 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTTGACAAAAT+AGG | - | chr1_1:26927798-26927817 | Msa0016180:intron | 15.0% |
| !!! | AATGTTTATATTTGTGATTT+TGG | - | chr1_1:26928719-26928738 | Msa0016180:intron | 15.0% |
| !!! | ATTTTCTATCTAATATTTTC+TGG | + | chr1_1:26929106-26929125 | None:intergenic | 15.0% |
| !!! | TGTTGAACAAAAAATATTTT+GGG | - | chr1_1:26929595-26929614 | Msa0016180:intron | 15.0% |
| !!! | TATTTTAAGGTTAAGATATA+TGG | - | chr1_1:26929719-26929738 | Msa0016180:CDS | 15.0% |
| !!! | ATAGTTTATTTCTAAAGTAT+TGG | + | chr1_1:26929747-26929766 | None:intergenic | 15.0% |
| !!! | TTATAATTTTTTTATGGACA+AGG | - | chr1_1:26930649-26930668 | Msa0016180:intron | 15.0% |
| !!! | TCAAATAACTCTAAAATTTT+TGG | - | chr1_1:26930807-26930826 | Msa0016180:intron | 15.0% |
| !!! | CAAATAACTCTAAAATTTTT+GGG | - | chr1_1:26930808-26930827 | Msa0016180:intron | 15.0% |
| !!! | AAAAATCTTACTTATTTTAC+TGG | + | chr1_1:26931564-26931583 | None:intergenic | 15.0% |
| !!! | ATTAAGTTCTGATTTAATTA+AGG | - | chr1_1:26931755-26931774 | Msa0016180:intron | 15.0% |
| !! | TACAAATATAAACTTCATTT+AGG | + | chr1_1:26931796-26931815 | None:intergenic | 15.0% |
| !! | TTTATGAAAAACAACTTATT+AGG | - | chr1_1:26932453-26932472 | Msa0016180:intron | 15.0% |
| !! | TTTATGAAAAACAACTTATT+AGG | - | chr1_1:26932453-26932472 | Msa0016180:intron | 15.0% |
| !!! | TGAATAAGTTATTTTGAAAA+AGG | + | chr1_1:26932666-26932685 | None:intergenic | 15.0% |
| !!! | TGAATAAGTTATTTTGAAAA+AGG | + | chr1_1:26932666-26932685 | None:intergenic | 15.0% |
| !!! | TGAAAAATTTGTTTTGAAAA+AGG | - | chr1_1:26933215-26933234 | Msa0016180:intron | 15.0% |
| !!! | TAAATAAGTTGTTTTGAAAA+AGG | - | chr1_1:26933201-26933220 | Msa0016180:intron | 15.0% |
| !!! | TGAATTATTTAATTTACTCT+AGG | - | chr1_1:26934608-26934627 | Msa0016180:intron | 15.0% |
| !!! | GATACTTCAATTATTTTTTA+AGG | + | chr1_1:26934821-26934840 | None:intergenic | 15.0% |
| !!! | TGTTGAACAAAAAATATTTT+GGG | - | chr1_1:26929595-26929614 | Msa0016180:intron | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1_1:26935567-26935586 | Msa0016180:intron | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1_1:26935568-26935587 | Msa0016180:intron | 15.0% |
| !!! | AAAATATGCGATTTTTTTTT+TGG | - | chr1_1:26936120-26936139 | Msa0016180:intron | 15.0% |
| !!! | ACTTTTTATGAGTTATTCAA+TGG | - | chr1_1:26924491-26924510 | Msa0016180:intron | 20.0% |
| !!! | AAATTGTTTGATTTTAGTCA+TGG | - | chr1_1:26924802-26924821 | Msa0016180:intron | 20.0% |
| !! | TTAAAAAAGTTCATCTATCA+TGG | + | chr1_1:26924928-26924947 | None:intergenic | 20.0% |
| !!! | TAAGTTTTATTATTGTTCCT+TGG | + | chr1_1:26925347-26925366 | None:intergenic | 20.0% |
| !! | TTATTGATCAAATTTGTACA+TGG | - | chr1_1:26925364-26925383 | Msa0016180:intron | 20.0% |
| !!! | TTACTTTTTGTATTCTAGTT+TGG | + | chr1_1:26925543-26925562 | None:intergenic | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | - | chr1_1:26925787-26925806 | Msa0016180:intron | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr1_1:26926179-26926198 | None:intergenic | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr1_1:26926182-26926201 | Msa0016180:intron | 20.0% |
| !! | ATAATTAACCCCAAAAAATA+TGG | - | chr1_1:26926274-26926293 | Msa0016180:intron | 20.0% |
| !!! | AAGATATATTTTATTTTCGG+TGG | - | chr1_1:26926305-26926324 | Msa0016180:intron | 20.0% |
| !!! | TTAACTTTTAAATACATACG+TGG | - | chr1_1:26926399-26926418 | Msa0016180:intron | 20.0% |
| !!! | TTCATCAACAGATTTTATAT+TGG | + | chr1_1:26926477-26926496 | None:intergenic | 20.0% |
| !! | TCCCAACAAAATAAAATTAT+TGG | - | chr1_1:26926889-26926908 | Msa0016180:intron | 20.0% |
| !!! | CTCCAATAATTTTATTTTGT+TGG | + | chr1_1:26926894-26926913 | None:intergenic | 20.0% |
| !! | CAACAAAATAAAATTATTGG+AGG | - | chr1_1:26926892-26926911 | Msa0016180:intron | 20.0% |
| !! | AAAAAAAAAACTAAGCTTGA+AGG | - | chr1_1:26927590-26927609 | Msa0016180:intron | 20.0% |
| !! | TGTATTGTAATTCTTCAATT+TGG | - | chr1_1:26928337-26928356 | Msa0016180:intron | 20.0% |
| !! | AATTCAAAAACTGAAAGAAT+AGG | - | chr1_1:26928470-26928489 | Msa0016180:intron | 20.0% |
| !!! | TAATCTGCCATTTTTATATA+AGG | + | chr1_1:26928914-26928933 | None:intergenic | 20.0% |
| !! | TATATAAAAATGGCAGATTA+AGG | - | chr1_1:26928914-26928933 | Msa0016180:intron | 20.0% |
| !! | ATATAAAAATGGCAGATTAA+GGG | - | chr1_1:26928915-26928934 | Msa0016180:intron | 20.0% |
| !! | TTGGTTATATTAGATTTACA+AGG | + | chr1_1:26929001-26929020 | None:intergenic | 20.0% |
| !!! | TAAAGACATTTTTTGTAGTA+TGG | + | chr1_1:26929185-26929204 | None:intergenic | 20.0% |
| !! | TTGGAAATTTAAGGAATATA+GGG | + | chr1_1:26929571-26929590 | None:intergenic | 20.0% |
| !! | TTTGGAAATTTAAGGAATAT+AGG | + | chr1_1:26929572-26929591 | None:intergenic | 20.0% |
| !! | ATATTCCTTAAATTTCCAAA+CGG | - | chr1_1:26929572-26929591 | Msa0016180:intron | 20.0% |
| !!! | GTGTTGAACAAAAAATATTT+TGG | - | chr1_1:26929594-26929613 | Msa0016180:intron | 20.0% |
| !!! | ATATTTGGTTTCAAAAAAAC+TGG | - | chr1_1:26929633-26929652 | Msa0016180:intron | 20.0% |
| !!! | TATTTGGTTTCAAAAAAACT+GGG | - | chr1_1:26929634-26929653 | Msa0016180:intron | 20.0% |
| !!! | TTCAAAAACTGATTTGATAT+TGG | + | chr1_1:26929771-26929790 | None:intergenic | 20.0% |
| !!! | AATATCAAATCAGTTTTTGA+AGG | - | chr1_1:26929770-26929789 | Msa0016180:CDS | 20.0% |
| !!! | AAATATGTGATTTTTTTGGA+AGG | - | chr1_1:26930026-26930045 | Msa0016180:intron | 20.0% |
| !! | AAATAATCTCTAAACTTTAC+AGG | - | chr1_1:26930110-26930129 | Msa0016180:intron | 20.0% |
| !!! | AACACTTGAAAGATTTTAAA+GGG | - | chr1_1:26930359-26930378 | Msa0016180:CDS | 20.0% |
| !! | TAACAAAAAAAGATCTTGTA+TGG | - | chr1_1:26930441-26930460 | Msa0016180:CDS | 20.0% |
| !! | AACAAAAAAAGATCTTGTAT+GGG | - | chr1_1:26930442-26930461 | Msa0016180:CDS | 20.0% |
| !! | TAAAACCTAGTAATTTCTTT+CGG | + | chr1_1:26930594-26930613 | None:intergenic | 20.0% |
| !!! | TTTTATGTAATTAATCCTAC+CGG | + | chr1_1:26930943-26930962 | None:intergenic | 20.0% |
| !! | TACAATGCTTAAAATTGAAA+GGG | + | chr1_1:26931328-26931347 | None:intergenic | 20.0% |
| !! | ATACAATGCTTAAAATTGAA+AGG | + | chr1_1:26931329-26931348 | None:intergenic | 20.0% |
| !! | ATCAATAGGTAAATTACATA+AGG | + | chr1_1:26931393-26931412 | None:intergenic | 20.0% |
| !! | ATTTATGAATTTCTTAACCA+TGG | - | chr1_1:26931652-26931671 | Msa0016180:intron | 20.0% |
| !! | TTCTGATTTAATTAAGGATT+AGG | - | chr1_1:26931761-26931780 | Msa0016180:intron | 20.0% |
| !! | AAGTTCATAAACCATTTAAA+TGG | + | chr1_1:26932166-26932185 | None:intergenic | 20.0% |
| !!! | GAAAGTGTACTAAAAAAATA+TGG | + | chr1_1:26932261-26932280 | None:intergenic | 20.0% |
| !!! | ATAAGCAGTTTTTGAAAAAA+AGG | + | chr1_1:26932358-26932377 | None:intergenic | 20.0% |
| !! | AAAACAACTTATTTATGCAA+AGG | + | chr1_1:26932380-26932399 | None:intergenic | 20.0% |
| !!! | TGAATAAGTTATTTCGAAAA+AGG | - | chr1_1:26933275-26933294 | Msa0016180:intron | 20.0% |
| !! | TTTACGTAAAACAACTTATT+AGG | + | chr1_1:26933305-26933324 | None:intergenic | 20.0% |
| !!! | GATTTTAGTCATTGTTTATT+AGG | + | chr1_1:26933351-26933370 | None:intergenic | 20.0% |
| !! | AATAAACAATGACTAAAATC+CGG | - | chr1_1:26933351-26933370 | Msa0016180:intron | 20.0% |
| !!! | TAAACCAGTTTTTTTTAAAG+TGG | - | chr1_1:26933511-26933530 | Msa0016180:intron | 20.0% |
| !!! | AAAACCACTTTAAAAAAAAC+TGG | + | chr1_1:26933518-26933537 | None:intergenic | 20.0% |
| !! | TACATAAATCATGAAAGAAA+TGG | + | chr1_1:26933819-26933838 | None:intergenic | 20.0% |
| !!! | GAAGAATAACTTTGTAATTT+TGG | - | chr1_1:26934368-26934387 | Msa0016180:intron | 20.0% |
| !!! | TCAATTATTTTTTAAGGGTA+AGG | + | chr1_1:26934815-26934834 | None:intergenic | 20.0% |
| !!! | TAAAGCAAAATTACTTTTGT+AGG | + | chr1_1:26934843-26934862 | None:intergenic | 20.0% |
| !! | AATTGATTGCATTTCAATAA+AGG | - | chr1_1:26934947-26934966 | Msa0016180:intron | 20.0% |
| !! | ACAATGATACATAAACAATA+GGG | + | chr1_1:26935392-26935411 | None:intergenic | 20.0% |
| !! | AACAATGATACATAAACAAT+AGG | + | chr1_1:26935393-26935412 | None:intergenic | 20.0% |
| !! | TTGGAAATTTAAGGAATATA+GGG | + | chr1_1:26929571-26929590 | None:intergenic | 20.0% |
| !! | TTTGGAAATTTAAGGAATAT+AGG | + | chr1_1:26929572-26929591 | None:intergenic | 20.0% |
| !! | ATATTCCTTAAATTTCCAAA+CGG | - | chr1_1:26929572-26929591 | Msa0016180:intron | 20.0% |
| !!! | GTGTTGAACAAAAAATATTT+TGG | - | chr1_1:26929594-26929613 | Msa0016180:intron | 20.0% |
| !! | TTAACTTTCAAATTCATTAG+TGG | - | chr1_1:26935626-26935645 | Msa0016180:intron | 20.0% |
| !!! | TATTTTAAGGTGAAGATATT+TGG | - | chr1_1:26935653-26935672 | Msa0016180:intron | 20.0% |
| ! | ATTATCCAACAAAAATTCTG+AGG | - | chr1_1:26924360-26924379 | Msa0016180:CDS | 25.0% |
| ! | ATCATAGAACAAAAATCCAA+AGG | + | chr1_1:26924678-26924697 | None:intergenic | 25.0% |
| !! | GATTTTTGTTCTATGATTGT+TGG | - | chr1_1:26924681-26924700 | Msa0016180:intron | 25.0% |
| !!! | AAACTTGATTTTTCGAAACA+AGG | - | chr1_1:26924724-26924743 | Msa0016180:intron | 25.0% |
| !!! | TGTAACTATTTTGACTAGTT+TGG | + | chr1_1:26925032-26925051 | None:intergenic | 25.0% |
| !! | GAAGTGTTCGATAAAATTAA+CGG | + | chr1_1:26925171-26925190 | None:intergenic | 25.0% |
| !!! | GTATTCTAGTTTGGATAATT+TGG | + | chr1_1:26925534-26925553 | None:intergenic | 25.0% |
| ! | AAAGGTAAAACTTGAGATAT+GGG | + | chr1_1:26925611-26925630 | None:intergenic | 25.0% |
| !!! | CTATATGATTTTTCGATGAA+AGG | + | chr1_1:26925629-26925648 | None:intergenic | 25.0% |
| ! | TCACTAATATGGAATCAATT+GGG | + | chr1_1:26925679-26925698 | None:intergenic | 25.0% |
| ! | TTAACACATTCTCACTAATA+TGG | + | chr1_1:26925690-26925709 | None:intergenic | 25.0% |
| ! | TTAGTGAGAATGTGTTAATT+TGG | - | chr1_1:26925692-26925711 | Msa0016180:intron | 25.0% |
| !! | TAATTTGGAGAGATTTTGTA+TGG | - | chr1_1:26925707-26925726 | Msa0016180:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+AGG | + | chr1_1:26926212-26926231 | None:intergenic | 25.0% |
| !! | TATGAGTTTACTTTAAAGGA+GGG | + | chr1_1:26925905-26925924 | None:intergenic | 25.0% |
| ! | TACCTATGAGTTTACTTTAA+AGG | + | chr1_1:26925909-26925928 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr1_1:26926211-26926230 | Msa0016180:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr1_1:26926212-26926231 | Msa0016180:intron | 25.0% |
| !!! | TTTGGGGTTAATTATGTTTT+TGG | + | chr1_1:26926269-26926288 | None:intergenic | 25.0% |
| !!! | TGTTGAACACCATATTTTTT+GGG | + | chr1_1:26926286-26926305 | None:intergenic | 25.0% |
| !!! | TTGTTGAACACCATATTTTT+TGG | + | chr1_1:26926287-26926306 | None:intergenic | 25.0% |
| ! | TTTGCAAAGTCTCTTATATA+TGG | - | chr1_1:26926369-26926388 | Msa0016180:intron | 25.0% |
| ! | GAATTACAACGATTCAAATT+TGG | + | chr1_1:26926847-26926866 | None:intergenic | 25.0% |
| !! | TAGTATATGAGTCAGTTTTA+GGG | + | chr1_1:26927125-26927144 | None:intergenic | 25.0% |
| !! | TTAGTATATGAGTCAGTTTT+AGG | + | chr1_1:26927126-26927145 | None:intergenic | 25.0% |
| ! | GCATGTTACATTGATAAAAT+AGG | - | chr1_1:26927763-26927782 | Msa0016180:intron | 25.0% |
| !!! | ACTGTTTTTGAACTGATTTT+TGG | - | chr1_1:26928370-26928389 | Msa0016180:intron | 25.0% |
| !!! | CTGTTTTTGAACTGATTTTT+GGG | - | chr1_1:26928371-26928390 | Msa0016180:intron | 25.0% |
| ! | GTTCAATGGATATTATAGTT+AGG | - | chr1_1:26928492-26928511 | Msa0016180:intron | 25.0% |
| ! | TTGTGATGATATACACAAAT+AGG | - | chr1_1:26928810-26928829 | Msa0016180:intron | 25.0% |
| ! | AAGATTATCCTATGAAAATC+TGG | + | chr1_1:26929366-26929385 | None:intergenic | 25.0% |
| ! | TATTTCTCCACATATATCTT+AGG | + | chr1_1:26929530-26929549 | None:intergenic | 25.0% |
| ! | AGATATATGTGGAGAAATAT+TGG | - | chr1_1:26929531-26929550 | Msa0016180:intron | 25.0% |
| !!! | TGAACAAAAAATATTTTGGG+TGG | - | chr1_1:26929598-26929617 | Msa0016180:intron | 25.0% |
| ! | AAGAGATATCCATATTTGAA+AGG | + | chr1_1:26929674-26929693 | None:intergenic | 25.0% |
| ! | CTCTTAACTTTCAAATTCAT+TGG | - | chr1_1:26929689-26929708 | Msa0016180:CDS | 25.0% |
| ! | TTAACTTTCAAATTCATTGG+TGG | - | chr1_1:26929692-26929711 | Msa0016180:CDS | 25.0% |
| ! | GTCATTATAACTTCAAAAGA+GGG | + | chr1_1:26930209-26930228 | None:intergenic | 25.0% |
| ! | TGTCATTATAACTTCAAAAG+AGG | + | chr1_1:26930210-26930229 | None:intergenic | 25.0% |
| ! | ATATCTACTAAACCATGATT+TGG | - | chr1_1:26930306-26930325 | Msa0016180:intron | 25.0% |
| !! | GAACACTTGAAAGATTTTAA+AGG | - | chr1_1:26930358-26930377 | Msa0016180:CDS | 25.0% |
| !! | AAAGTATAATTTGCAAGTTG+AGG | - | chr1_1:26930489-26930508 | Msa0016180:intron | 25.0% |
| !! | GTAAATTTGAGATGATTCAA+CGG | - | chr1_1:26930518-26930537 | Msa0016180:CDS | 25.0% |
| ! | ATAGTGACAATGAATGAAAA+CGG | + | chr1_1:26930547-26930566 | None:intergenic | 25.0% |
| ! | TAAAAAAAGAAACTGAATCC+TGG | + | chr1_1:26930722-26930741 | None:intergenic | 25.0% |
| ! | TTTATGTAATTAATCCTACC+GGG | + | chr1_1:26930942-26930961 | None:intergenic | 25.0% |
| ! | AAATATTGTGGAGTTGAAAA+TGG | - | chr1_1:26931073-26931092 | Msa0016180:CDS | 25.0% |
| ! | AATATTGTGGAGTTGAAAAT+GGG | - | chr1_1:26931074-26931093 | Msa0016180:CDS | 25.0% |
| !!! | AATTATTATGAGAGTATTCG+TGG | - | chr1_1:26931122-26931141 | Msa0016180:CDS | 25.0% |
| !!! | TTACCTATTGATTTACCTAT+TGG | - | chr1_1:26931401-26931420 | Msa0016180:intron | 25.0% |
| ! | AATCCAATAGGTAAATCAAT+AGG | + | chr1_1:26931407-26931426 | None:intergenic | 25.0% |
| ! | GCATTCAATTAAAATCCAAT+AGG | + | chr1_1:26931419-26931438 | None:intergenic | 25.0% |
| ! | TGCATGAAAACTATATATGT+TGG | + | chr1_1:26931456-26931475 | None:intergenic | 25.0% |
| !!! | TTAAATGGTGCAGTTTTTTT+TGG | + | chr1_1:26932151-26932170 | None:intergenic | 25.0% |
| ! | AAAAAACTGCACCATTTAAA+TGG | - | chr1_1:26932152-26932171 | Msa0016180:intron | 25.0% |
| !! | ATTCAGTTCAATTTTCAAAC+CGG | - | chr1_1:26932209-26932228 | Msa0016180:intron | 25.0% |
| ! | ATGGTTCGAATATATTAAAC+TGG | + | chr1_1:26932242-26932261 | None:intergenic | 25.0% |
| !! | AATAAGTTGTTTCGAATAAG+CGG | + | chr1_1:26932435-26932454 | None:intergenic | 25.0% |
| ! | TTTATGCAAAACAGCTTATT+AGG | - | chr1_1:26932391-26932410 | Msa0016180:intron | 25.0% |
| !! | AATAAGTTGTTTCGAATAAG+CGG | + | chr1_1:26932435-26932454 | None:intergenic | 25.0% |
| ! | TTTACGCAAAATAGCTTATT+AGG | - | chr1_1:26932635-26932654 | Msa0016180:CDS | 25.0% |
| ! | AACAGCTTATTTACGTAAAA+CGG | - | chr1_1:26932807-26932826 | Msa0016180:intron | 25.0% |
| ! | TTTACGCAAAATAGCTTATT+AGG | - | chr1_1:26932635-26932654 | Msa0016180:CDS | 25.0% |
| ! | TTTATGCAAAACGACTTATT+AGG | + | chr1_1:26933107-26933126 | None:intergenic | 25.0% |
| ! | TTTATGCAAAACAGCTTATT+AGG | + | chr1_1:26932391-26932410 | None:intergenic | 25.0% |
| ! | TTTACGTAAAACAGCTTATT+AGG | + | chr1_1:26933245-26933264 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGAACTGGATTT+TGG | - | chr1_1:26933893-26933912 | Msa0016180:intron | 25.0% |
| !!! | TTGTTTTTGAACTGGATTTT+GGG | - | chr1_1:26933894-26933913 | Msa0016180:intron | 25.0% |
| ! | AAATTGAAGAACTACAAATC+AGG | + | chr1_1:26933975-26933994 | None:intergenic | 25.0% |
| ! | TTGCTTACTAGTAAATGAAA+AGG | + | chr1_1:26934187-26934206 | None:intergenic | 25.0% |
| ! | TTTACTAGTAAGCAATTGTT+TGG | - | chr1_1:26934192-26934211 | Msa0016180:intron | 25.0% |
| ! | TTTATTGCCGAAGAAATAAT+AGG | - | chr1_1:26934217-26934236 | Msa0016180:intron | 25.0% |
| !! | CATTGAACCTATTATTTCTT+CGG | + | chr1_1:26934227-26934246 | None:intergenic | 25.0% |
| ! | GTTCAATGGATATTATAGTT+AGG | - | chr1_1:26928492-26928511 | Msa0016180:intron | 25.0% |
| !!! | ATTTAATTTACTCTAGGACT+AGG | - | chr1_1:26934614-26934633 | Msa0016180:intron | 25.0% |
| ! | GAAAGCTCATTATTATAAAG+TGG | - | chr1_1:26934638-26934657 | Msa0016180:intron | 25.0% |
| ! | TCATTGAAAGGGAAAAAATT+GGG | + | chr1_1:26934915-26934934 | None:intergenic | 25.0% |
| ! | TTCATTGAAAGGGAAAAAAT+TGG | + | chr1_1:26934916-26934935 | None:intergenic | 25.0% |
| ! | ATTGAAATGCAATCAATTTG+AGG | + | chr1_1:26934945-26934964 | None:intergenic | 25.0% |
| ! | TTTGAGTGTTATAAAGTTGA+TGG | + | chr1_1:26935204-26935223 | None:intergenic | 25.0% |
| !!! | ACATGATTTCAGAAAGTATT+GGG | + | chr1_1:26935256-26935275 | None:intergenic | 25.0% |
| !! | AACATGATTTCAGAAAGTAT+TGG | + | chr1_1:26935257-26935276 | None:intergenic | 25.0% |
| ! | AAGATTATCCTATGAAAATC+TGG | + | chr1_1:26929366-26929385 | None:intergenic | 25.0% |
| ! | TATTTCTCCACATATTTCTT+AGG | + | chr1_1:26935464-26935483 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1_1:26935465-26935484 | Msa0016180:intron | 25.0% |
| !!! | TGAACAAAAAATATTTTGGG+TGG | - | chr1_1:26929598-26929617 | Msa0016180:intron | 25.0% |
| ! | AAGAGATATCCATATTTGAA+AGG | + | chr1_1:26929674-26929693 | None:intergenic | 25.0% |
| !!! | CATTAGTGGATCATATTTTA+AGG | - | chr1_1:26935640-26935659 | Msa0016180:intron | 25.0% |
| ! | TTCATCAACAGATTTGATAT+TGG | + | chr1_1:26935705-26935724 | None:intergenic | 25.0% |
| !! | AATATCAAATCTGTTGATGA+AGG | - | chr1_1:26935704-26935723 | Msa0016180:intron | 25.0% |
| !! | GTGATTTTTCTCTCTTTTTT+TGG | - | chr1_1:26935927-26935946 | Msa0016180:intron | 25.0% |
| !!! | TCTCTTTTTTTGGTAGATTT+AGG | - | chr1_1:26935937-26935956 | Msa0016180:intron | 25.0% |
| !!! | TACTTTTAAGAGTTATGCAA+TGG | - | chr1_1:26936015-26936034 | Msa0016180:intron | 25.0% |
| !!! | TATGCGATTTTTTTTTTGGT+AGG | - | chr1_1:26936124-26936143 | Msa0016180:intron | 25.0% |
| ! | AAATAGTTAATGCCTAAACT+TGG | - | chr1_1:26936243-26936262 | Msa0016180:intron | 25.0% |
| ! | GTCATTATAACTTCAAAAGA+GGG | + | chr1_1:26930209-26930228 | None:intergenic | 25.0% |
| ! | TGTCATTATAACTTCAAAAG+AGG | + | chr1_1:26930210-26930229 | None:intergenic | 25.0% |
| !! | GAACACTTGAAAGATTTTAA+TGG | - | chr1_1:26930358-26930377 | Msa0016180:CDS | 25.0% |
| ! | TTCAACCTCAGAATTTTTGT+TGG | + | chr1_1:26924368-26924387 | None:intergenic | 30.0% |
| !!! | TGATTGTTGGTAATGTGTTT+TGG | - | chr1_1:26924694-26924713 | Msa0016180:intron | 30.0% |
| !! | TAAAGACAATATGACTTGCT+TGG | - | chr1_1:26924983-26925002 | Msa0016180:intron | 30.0% |
| AATGAAAATGCTAGCACTAA+AGG | + | chr1_1:26925296-26925315 | None:intergenic | 30.0% | |
| !!! | CTTTTGACTTGAAATGCAAA+TGG | - | chr1_1:26925406-26925425 | Msa0016180:CDS | 30.0% |
| GGAACTATATATGCTCTATT+TGG | + | chr1_1:26925483-26925502 | None:intergenic | 30.0% | |
| AAAAGTAAAATGCGTGACTT+TGG | - | chr1_1:26925555-26925574 | Msa0016180:intron | 30.0% | |
| GAAAGGTAAAACTTGAGATA+TGG | + | chr1_1:26925612-26925631 | None:intergenic | 30.0% | |
| CTCACTAATATGGAATCAAT+TGG | + | chr1_1:26925680-26925699 | None:intergenic | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | + | chr1_1:26926198-26926217 | None:intergenic | 30.0% | |
| ! | ATGAGTTTACTTTAAAGGAG+GGG | + | chr1_1:26925904-26925923 | None:intergenic | 30.0% |
| ! | CTATGAGTTTACTTTAAAGG+AGG | + | chr1_1:26925906-26925925 | None:intergenic | 30.0% |
| !! | CTCCTTTAAAGTAAACTCAT+AGG | - | chr1_1:26925904-26925923 | Msa0016180:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr1_1:26926198-26926217 | Msa0016180:intron | 30.0% | |
| !!! | GTTGAACACCATATTTTTTG+GGG | + | chr1_1:26926285-26926304 | None:intergenic | 30.0% |
| GTTGTAATTCTTTGATCCAA+TGG | - | chr1_1:26926857-26926876 | Msa0016180:intron | 30.0% | |
| ! | GTTCGTACATTTTATAACAC+CGG | + | chr1_1:26927010-26927029 | None:intergenic | 30.0% |
| !! | AGTATATGAGTCAGTTTTAG+GGG | + | chr1_1:26927124-26927143 | None:intergenic | 30.0% |
| !!! | TTTGGATGTCGTTTTTTCAA+TGG | + | chr1_1:26927153-26927172 | None:intergenic | 30.0% |
| !!! | GTTTGGTTTTGGACTTTTTT+TGG | + | chr1_1:26927319-26927338 | None:intergenic | 30.0% |
| AGTTTAGTGGCATTATTGTT+TGG | + | chr1_1:26927459-26927478 | None:intergenic | 30.0% | |
| TATGAACCCAAATAACATGA+CGG | - | chr1_1:26927664-26927683 | Msa0016180:intron | 30.0% | |
| ! | TGATAGTGTTTCTCTATTGA+TGG | - | chr1_1:26928413-26928432 | Msa0016180:intron | 30.0% |
| AACTGAAAGAATAGGTTCAA+TGG | - | chr1_1:26928478-26928497 | Msa0016180:intron | 30.0% | |
| AGTTGTGATGATTCACAAAT+AGG | - | chr1_1:26928625-26928644 | Msa0016180:intron | 30.0% | |
| !!! | CTTTTAATTTGCCACAAAAG+TGG | + | chr1_1:26928847-26928866 | None:intergenic | 30.0% |
| !! | TTCTAGCTTACATTGTAAGA+TGG | - | chr1_1:26928877-26928896 | Msa0016180:intron | 30.0% |
| !!! | TTTTTATATAAGGTGCTGTC+TGG | + | chr1_1:26928904-26928923 | None:intergenic | 30.0% |
| GACAGCACCTTATATAAAAA+TGG | - | chr1_1:26928904-26928923 | Msa0016180:intron | 30.0% | |
| TAGTACAATTCAGTGAAAGT+TGG | + | chr1_1:26929020-26929039 | None:intergenic | 30.0% | |
| !!! | ATTTTCTGGTGTTACTACTT+TGG | + | chr1_1:26929092-26929111 | None:intergenic | 30.0% |
| !!! | GACATTTTTTGTAGTATGGT+AGG | + | chr1_1:26929181-26929200 | None:intergenic | 30.0% |
| ! | AACATGTTCCAGATTTTCAT+AGG | - | chr1_1:26929355-26929374 | Msa0016180:intron | 30.0% |
| TCTGAATTTCTTTATTGCAG+AGG | - | chr1_1:26929501-26929520 | Msa0016180:intron | 30.0% | |
| CTGAATTTCTTTATTGCAGA+GGG | - | chr1_1:26929502-26929521 | Msa0016180:intron | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_1:26929536-26929555 | Msa0016180:intron | 30.0% | |
| !!! | ATTTTTTGTTCAACACCGTT+TGG | + | chr1_1:26929590-26929609 | None:intergenic | 30.0% |
| TTTGCAAAGCCTTTCAAATA+TGG | - | chr1_1:26929662-26929681 | Msa0016180:intron | 30.0% | |
| !! | CATTGGTGGATCATATTTTA+AGG | - | chr1_1:26929706-26929725 | Msa0016180:CDS | 30.0% |
| ! | CTTTCTTCATCTTCTTTTGT+GGG | + | chr1_1:26929848-26929867 | None:intergenic | 30.0% |
| ! | ACTTTCTTCATCTTCTTTTG+TGG | + | chr1_1:26929849-26929868 | None:intergenic | 30.0% |
| AAGCTCAAAGGACAATAAAA+GGG | - | chr1_1:26929903-26929922 | Msa0016180:intron | 30.0% | |
| AGTTTAGGCTTGTAAATCTA+AGG | - | chr1_1:26929945-26929964 | Msa0016180:intron | 30.0% | |
| TGTTCTCTTGAAAACTCAAA+TGG | + | chr1_1:26930343-26930362 | None:intergenic | 30.0% | |
| AAAAAAAGATCTTGTATGGG+AGG | - | chr1_1:26930445-26930464 | Msa0016180:CDS | 30.0% | |
| CTAGTAATTTCTTTCGGATT+GGG | + | chr1_1:26930588-26930607 | None:intergenic | 30.0% | |
| TATGGACAAGGTTATAAGAA+AGG | - | chr1_1:26930661-26930680 | Msa0016180:intron | 30.0% | |
| ATGGACAAGGTTATAAGAAA+GGG | - | chr1_1:26930662-26930681 | Msa0016180:intron | 30.0% | |
| TTTGATGAAGCATACATTCA+AGG | - | chr1_1:26930897-26930916 | Msa0016180:intron | 30.0% | |
| TTATGTAATTAATCCTACCG+GGG | + | chr1_1:26930941-26930960 | None:intergenic | 30.0% | |
| AGGATGTCATGAAAATATTG+TGG | - | chr1_1:26931061-26931080 | Msa0016180:CDS | 30.0% | |
| ATATTGTGGAGTTGAAAATG+GGG | - | chr1_1:26931075-26931094 | Msa0016180:CDS | 30.0% | |
| ATTCATGAAAGAATGCAATG+TGG | - | chr1_1:26931172-26931191 | Msa0016180:CDS | 30.0% | |
| GTGTTTGATGTTTCAATTGT+AGG | - | chr1_1:26931242-26931261 | Msa0016180:intron | 30.0% | |
| CTAGTTACTAGTACTTTCAT+GGG | + | chr1_1:26931274-26931293 | None:intergenic | 30.0% | |
| TCTAGTTACTAGTACTTTCA+TGG | + | chr1_1:26931275-26931294 | None:intergenic | 30.0% | |
| TATTGTGACCTCATATGAAA+TGG | - | chr1_1:26931356-26931375 | Msa0016180:CDS | 30.0% | |
| ATTGATGAGCTGATCATAAT+AGG | - | chr1_1:26931482-26931501 | Msa0016180:intron | 30.0% | |
| AAAAGAGGATGAAGAAACTA+CGG | + | chr1_1:26932052-26932071 | None:intergenic | 30.0% | |
| ! | ATATTAAACTGGTTCCAAAC+CGG | + | chr1_1:26932231-26932250 | None:intergenic | 30.0% |
| TTTACGTAAAACGGCTTATT+AGG | - | chr1_1:26932816-26932835 | Msa0016180:intron | 30.0% | |
| ! | GAATAATCTGGTTCAAAAAC+TGG | - | chr1_1:26933391-26933410 | Msa0016180:intron | 30.0% |
| ! | ACTGGTTTAAAACTGTAAAC+CGG | - | chr1_1:26933409-26933428 | Msa0016180:intron | 30.0% |
| ! | CTGGTTCGAAATAAATAAAC+CGG | - | chr1_1:26933439-26933458 | Msa0016180:intron | 30.0% |
| CTGAATTGTATCCATTAATG+TGG | - | chr1_1:26933543-26933562 | Msa0016180:intron | 30.0% | |
| TTTGAAAACGAGTGATCAAT+CGG | + | chr1_1:26933652-26933671 | None:intergenic | 30.0% | |
| TCAAATAAATAGAGCTGCAA+TGG | - | chr1_1:26933667-26933686 | Msa0016180:intron | 30.0% | |
| !!! | GATACTGTTTGTTTTTGAAC+TGG | - | chr1_1:26933886-26933905 | Msa0016180:intron | 30.0% |
| !!! | ATGTGATACTGTTTTTGAAC+TGG | - | chr1_1:26934000-26934019 | Msa0016180:intron | 30.0% |
| !!! | ACTGTTTTTGAACTGGATTT+TGG | - | chr1_1:26934007-26934026 | Msa0016180:intron | 30.0% |
| !!! | CTGTTTTTGAACTGGATTTT+GGG | - | chr1_1:26934008-26934027 | Msa0016180:intron | 30.0% |
| TAAAAGTTGTGCAATGAATC+AGG | + | chr1_1:26934069-26934088 | None:intergenic | 30.0% | |
| CGAAGAAATAATAGGTTCAA+TGG | - | chr1_1:26934225-26934244 | Msa0016180:intron | 30.0% | |
| AGTTGTGATGATTCACAAAT+AGG | - | chr1_1:26928625-26928644 | Msa0016180:intron | 30.0% | |
| AATAATATGCAGTTGTGCTA+AGG | - | chr1_1:26934519-26934538 | Msa0016180:intron | 30.0% | |
| ! | TGCTAAGGCTTTAATATATC+AGG | - | chr1_1:26934534-26934553 | Msa0016180:intron | 30.0% |
| CAAGCATCAAAGTAATTCAA+AGG | + | chr1_1:26934672-26934691 | None:intergenic | 30.0% | |
| CTTTGAATTACTTTGATGCT+TGG | - | chr1_1:26934670-26934689 | Msa0016180:intron | 30.0% | |
| AAAGGGAAAAAATTGGGATA+TGG | + | chr1_1:26934909-26934928 | None:intergenic | 30.0% | |
| GAGGTTTCATTTCATTGAAA+GGG | + | chr1_1:26934926-26934945 | None:intergenic | 30.0% | |
| TGAGGTTTCATTTCATTGAA+AGG | + | chr1_1:26934927-26934946 | None:intergenic | 30.0% | |
| GATTGCATTTCAATAAAGGT+TGG | - | chr1_1:26934951-26934970 | Msa0016180:intron | 30.0% | |
| ATAAACAAATGTGTGAGATG+AGG | + | chr1_1:26935016-26935035 | None:intergenic | 30.0% | |
| !! | GTGTTATAAAGTTGATGGAT+TGG | + | chr1_1:26935199-26935218 | None:intergenic | 30.0% |
| ! | AACATGTTCCAGATTTTCAT+AGG | - | chr1_1:26929355-26929374 | Msa0016180:intron | 30.0% |
| !!! | TCTGAATTTTTTTGTTGCAG+AGG | - | chr1_1:26935435-26935454 | Msa0016180:intron | 30.0% |
| !!! | CTGAATTTTTTTGTTGCAGA+GGG | - | chr1_1:26935436-26935455 | Msa0016180:intron | 30.0% |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_1:26929536-26929555 | Msa0016180:intron | 30.0% | |
| !!! | ATTTTTTGTTCAACACCGTT+TGG | + | chr1_1:26929590-26929609 | None:intergenic | 30.0% |
| TTTGCAAAGCCTTTCAAATA+TGG | - | chr1_1:26929662-26929681 | Msa0016180:intron | 30.0% | |
| ! | GAAAAATCACCTGAGAATTT+TGG | + | chr1_1:26935917-26935936 | None:intergenic | 30.0% |
| ! | GTTGCAATTTTATGTCTGAA+AGG | - | chr1_1:26936041-26936060 | Msa0016180:intron | 30.0% |
| ! | TAAACCATGATTTGAAACAG+TGG | - | chr1_1:26936445-26936464 | Msa0016180:intron | 30.0% |
| TTAATGGAACTGCAACAATA+AGG | - | chr1_1:26936505-26936524 | Msa0016180:intron | 30.0% | |
| TAATGGAACTGCAACAATAA+GGG | - | chr1_1:26936506-26936525 | Msa0016180:intron | 30.0% | |
| ! | TGAGATTTTCTCCCTTTAGT+TGG | - | chr1_1:26924840-26924859 | Msa0016180:intron | 35.0% |
| AGGGACTAAAACCAACTAAA+GGG | + | chr1_1:26924854-26924873 | None:intergenic | 35.0% | |
| AAGGGACTAAAACCAACTAA+AGG | + | chr1_1:26924855-26924874 | None:intergenic | 35.0% | |
| ! | AGTTTTTCTTCAATGCAGCA+TGG | - | chr1_1:26925052-26925071 | Msa0016180:CDS | 35.0% |
| ACAAATTAGCCGATAGTCTA+TGG | + | chr1_1:26925236-26925255 | None:intergenic | 35.0% | |
| ! | TAGACTATCGGCTAATTTGT+CGG | - | chr1_1:26925236-26925255 | Msa0016180:CDS | 35.0% |
| AAAATGCTAGCACTAAAGGT+AGG | + | chr1_1:26925292-26925311 | None:intergenic | 35.0% | |
| CACATTGAAATCAACTACCA+AGG | - | chr1_1:26925327-26925346 | Msa0016180:intron | 35.0% | |
| CATTGAAGATATGGTTGGAT+TGG | + | chr1_1:26925504-26925523 | None:intergenic | 35.0% | |
| ATCCAACCATATCTTCAATG+AGG | - | chr1_1:26925504-26925523 | Msa0016180:intron | 35.0% | |
| !! | TTGAGAGTCTAAGGAGTATT+GGG | + | chr1_1:26925742-26925761 | None:intergenic | 35.0% |
| ! | TTTGAGAGTCTAAGGAGTAT+TGG | + | chr1_1:26925743-26925762 | None:intergenic | 35.0% |
| ATACTCCTTAGACTCTCAAA+TGG | - | chr1_1:26925743-26925762 | Msa0016180:intron | 35.0% | |
| ! | TTATTTTCGGTGGAGAGTAA+TGG | - | chr1_1:26926315-26926334 | Msa0016180:intron | 35.0% |
| TGGAGAGTAATGGTGATATT+TGG | - | chr1_1:26926325-26926344 | Msa0016180:intron | 35.0% | |
| CATACGTGGATCATATTTCA+AGG | - | chr1_1:26926413-26926432 | Msa0016180:intron | 35.0% | |
| ATGTACCTAAGCAATCTCAA+AGG | - | chr1_1:26926548-26926567 | Msa0016180:intron | 35.0% | |
| CAATCTCAAAGGACAAGAAA+TGG | - | chr1_1:26926559-26926578 | Msa0016180:intron | 35.0% | |
| !! | CGAACTAAAGTGTCGTATAT+AGG | - | chr1_1:26927025-26927044 | Msa0016180:intron | 35.0% |
| !! | ACTAAAGTGTCGTATATAGG+CGG | - | chr1_1:26927028-26927047 | Msa0016180:intron | 35.0% |
| !!! | GGGGTGATGTTTATTTTGAT+GGG | + | chr1_1:26927104-26927123 | None:intergenic | 35.0% |
| !!! | GTATATGAGTCAGTTTTAGG+GGG | + | chr1_1:26927123-26927142 | None:intergenic | 35.0% |
| !!! | GATGTCGTTTTTTCAATGGT+TGG | + | chr1_1:26927149-26927168 | None:intergenic | 35.0% |
| !! | GTTCTCTTTTACAAGGTGTT+TGG | + | chr1_1:26927196-26927215 | None:intergenic | 35.0% |
| ! | CTGAATGATCTTTAGAGAAG+GGG | + | chr1_1:26927257-26927276 | None:intergenic | 35.0% |
| ! | GCTGAATGATCTTTAGAGAA+GGG | + | chr1_1:26927258-26927277 | None:intergenic | 35.0% |
| ! | AGCTGAATGATCTTTAGAGA+AGG | + | chr1_1:26927259-26927278 | None:intergenic | 35.0% |
| !!! | GACTTTTTTTGGTGTTCCTT+CGG | + | chr1_1:26927308-26927327 | None:intergenic | 35.0% |
| !! | CATTATTGTTTGGTTGGCTT+CGG | + | chr1_1:26927449-26927468 | None:intergenic | 35.0% |
| TAGTGGCATTATTGTTTGGT+TGG | + | chr1_1:26927455-26927474 | None:intergenic | 35.0% | |
| !! | TTCAGTTTAGGGTGTTTTGA+GGG | + | chr1_1:26927623-26927642 | None:intergenic | 35.0% |
| !! | TTTCAGTTTAGGGTGTTTTG+AGG | + | chr1_1:26927624-26927643 | None:intergenic | 35.0% |
| AAACACCCTAAACTGAAACA+AGG | - | chr1_1:26927626-26927645 | Msa0016180:intron | 35.0% | |
| AACACCCTAAACTGAAACAA+GGG | - | chr1_1:26927627-26927646 | Msa0016180:intron | 35.0% | |
| !!! | TTGTTGTGGGCCATTTTTAT+TGG | + | chr1_1:26927693-26927712 | None:intergenic | 35.0% |
| TTGGAAAACGAGAGATCAAT+CGG | + | chr1_1:26928144-26928163 | None:intergenic | 35.0% | |
| !! | ACAAAGCAAATCCACTTTTG+TGG | - | chr1_1:26928833-26928852 | Msa0016180:intron | 35.0% |
| GCATACACTCAAAAACACAT+TGG | + | chr1_1:26928975-26928994 | None:intergenic | 35.0% | |
| TCTCTACAAATGACCTGTAA+TGG | - | chr1_1:26929134-26929153 | Msa0016180:intron | 35.0% | |
| ACTTCATTACTGTCCATTAC+AGG | + | chr1_1:26929150-26929169 | None:intergenic | 35.0% | |
| AATGGACAGTAATGAAGTCT+TGG | - | chr1_1:26929152-26929171 | Msa0016180:intron | 35.0% | |
| TTTCACACTTTACACTTCAC+AGG | - | chr1_1:26929216-26929235 | Msa0016180:intron | 35.0% | |
| CAACACCGTTTGGAAATTTA+AGG | + | chr1_1:26929580-26929599 | None:intergenic | 35.0% | |
| !! | ATATTTTGGGTGGAGAGAAA+TGG | - | chr1_1:26929608-26929627 | Msa0016180:intron | 35.0% |
| TGGAGAGAAATGGTGATATT+TGG | - | chr1_1:26929618-26929637 | Msa0016180:intron | 35.0% | |
| ACTTTCTTTACCTTCTTCAG+TGG | + | chr1_1:26929804-26929823 | None:intergenic | 35.0% | |
| AAATGTCAAAGCAAGCTCAA+AGG | - | chr1_1:26929891-26929910 | Msa0016180:intron | 35.0% | |
| CAAGCTCAAAGGACAATAAA+AGG | - | chr1_1:26929902-26929921 | Msa0016180:intron | 35.0% | |
| AAAGGGAAGAGAAAATTCTC+AGG | - | chr1_1:26929920-26929939 | Msa0016180:intron | 35.0% | |
| GAAAATTCTCAGGTGAGTTT+AGG | - | chr1_1:26929930-26929949 | Msa0016180:intron | 35.0% | |
| CTTTACAGGTAGTAACAAAG+TGG | - | chr1_1:26930124-26930143 | Msa0016180:intron | 35.0% | |
| ATGACACAATCTTACACCAA+TGG | - | chr1_1:26930224-26930243 | Msa0016180:intron | 35.0% | |
| !! | TTACACCAATGGCTATTTCT+TGG | - | chr1_1:26930235-26930254 | Msa0016180:intron | 35.0% |
| ACTTACCAAGAAATAGCCAT+TGG | + | chr1_1:26930243-26930262 | None:intergenic | 35.0% | |
| ! | TAAACCATGATTTGGAACAG+TGG | - | chr1_1:26930314-26930333 | Msa0016180:intron | 35.0% |
| TTAAAGGGACTGCAACAATA+AGG | - | chr1_1:26930374-26930393 | Msa0016180:CDS | 35.0% | |
| TAAAGGGACTGCAACAATAA+GGG | - | chr1_1:26930375-26930394 | Msa0016180:CDS | 35.0% | |
| !! | CAATAAGGGTTGGTAAAGAA+AGG | - | chr1_1:26930389-26930408 | Msa0016180:CDS | 35.0% |
| ! | GAAGTGAGTTTGAGGTATTA+TGG | - | chr1_1:26930418-26930437 | Msa0016180:CDS | 35.0% |
| AGGTGGTTGGAAAATATTCA+GGG | - | chr1_1:26930465-26930484 | Msa0016180:intron | 35.0% | |
| CCTAGTAATTTCTTTCGGAT+TGG | + | chr1_1:26930589-26930608 | None:intergenic | 35.0% | |
| CCAATCCGAAAGAAATTACT+AGG | - | chr1_1:26930586-26930605 | Msa0016180:intron | 35.0% | |
| TGGACAAGGTTATAAGAAAG+GGG | - | chr1_1:26930663-26930682 | Msa0016180:intron | 35.0% | |
| AACTGAATCCTGGATAACTT+AGG | + | chr1_1:26930712-26930731 | None:intergenic | 35.0% | |
| TTATGCCTGTATTGTACAGA+AGG | - | chr1_1:26930868-26930887 | Msa0016180:intron | 35.0% | |
| ! | GAAGCATACATTCAAGGTTT+TGG | - | chr1_1:26930903-26930922 | Msa0016180:intron | 35.0% |
| ! | CCTCTTTTCATAAACTCCTT+TGG | + | chr1_1:26931044-26931063 | None:intergenic | 35.0% |
| CCAAAGGAGTTTATGAAAAG+AGG | - | chr1_1:26931041-26931060 | Msa0016180:CDS | 35.0% | |
| AAAGAATGCAATGTGGAGAT+TGG | - | chr1_1:26931179-26931198 | Msa0016180:CDS | 35.0% | |
| AAATTACATAAGGTCCCCTT+CGG | + | chr1_1:26931383-26931402 | None:intergenic | 35.0% | |
| TTAATCAATACCCGTAAGCA+CGG | + | chr1_1:26931540-26931559 | None:intergenic | 35.0% | |
| AATTTCTTAACCATGGTCTC+AGG | - | chr1_1:26931659-26931678 | Msa0016180:intron | 35.0% | |
| !! | TTTCTCCATCGATTCTCATT+AGG | - | chr1_1:26932070-26932089 | Msa0016180:intron | 35.0% |
| !! | TTCTCCATCGATTCTCATTA+GGG | - | chr1_1:26932071-26932090 | Msa0016180:intron | 35.0% |
| ATCCATAAACTGAACCAAAC+TGG | - | chr1_1:26932124-26932143 | Msa0016180:intron | 35.0% | |
| !!! | CAGTTTTTTTTGGTCCAGTT+TGG | + | chr1_1:26932141-26932160 | None:intergenic | 35.0% |
| ! | GTTCAATTTTCAAACCGGTT+TGG | - | chr1_1:26932214-26932233 | Msa0016180:intron | 35.0% |
| AAACCAGTTCGAGAATAATC+TGG | - | chr1_1:26933379-26933398 | Msa0016180:intron | 35.0% | |
| ! | TTTTCAAACCAGTTCCAGTT+CGG | + | chr1_1:26933490-26933509 | None:intergenic | 35.0% |
| TTGGAACTGAACCACATTAA+TGG | + | chr1_1:26933557-26933576 | None:intergenic | 35.0% | |
| !! | TTCATGGTTCTAAACTGCAT+TGG | + | chr1_1:26933576-26933595 | None:intergenic | 35.0% |
| ACGAAGGATGATGAGAATTA+GGG | + | chr1_1:26933602-26933621 | None:intergenic | 35.0% | |
| ! | TCGCTTCTTTCTTCTTGTTT+CGG | + | chr1_1:26933726-26933745 | None:intergenic | 35.0% |
| AATACATGCTTGAAGATCGA+TGG | + | chr1_1:26934573-26934592 | None:intergenic | 35.0% | |
| GAATTACTTTGATGCTTGGA+AGG | - | chr1_1:26934674-26934693 | Msa0016180:intron | 35.0% | |
| ATTGGGATATGGATTTGTCA+AGG | + | chr1_1:26934898-26934917 | None:intergenic | 35.0% | |
| !! | ATTTAAGAAGTGCTTGGGTT+GGG | + | chr1_1:26935137-26935156 | None:intergenic | 35.0% |
| !! | GAAGGATTTAAGAAGTGCTT+GGG | + | chr1_1:26935142-26935161 | None:intergenic | 35.0% |
| !! | TGAAGGATTTAAGAAGTGCT+TGG | + | chr1_1:26935143-26935162 | None:intergenic | 35.0% |
| !! | TTTCAGAAAGTATTGGGCTA+AGG | + | chr1_1:26935250-26935269 | None:intergenic | 35.0% |
| CAACACCGTTTGGAAATTTA+AGG | + | chr1_1:26929580-26929599 | None:intergenic | 35.0% | |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1_1:26935542-26935561 | Msa0016180:intron | 35.0% |
| TGGAGAGTAATGGTGATATT+TGG | - | chr1_1:26926325-26926344 | Msa0016180:intron | 35.0% | |
| ! | CTCTTCATGATTTTCTTCTG+TGG | + | chr1_1:26935786-26935805 | None:intergenic | 35.0% |
| AAATGCCAAACCAAGCTAAA+AGG | - | chr1_1:26935843-26935862 | Msa0016180:intron | 35.0% | |
| !! | CATTTCTTGTCCTTTTAGCT+TGG | + | chr1_1:26935856-26935875 | None:intergenic | 35.0% |
| CAAGCTAAAAGGACAAGAAA+TGG | - | chr1_1:26935854-26935873 | Msa0016180:intron | 35.0% | |
| !!! | ATCACCTGAGAATTTTGGTT+GGG | + | chr1_1:26935912-26935931 | None:intergenic | 35.0% |
| !! | AATCACCTGAGAATTTTGGT+TGG | + | chr1_1:26935913-26935932 | None:intergenic | 35.0% |
| AGGTAGTAACAAAGTAGCAA+TGG | - | chr1_1:26936267-26936286 | Msa0016180:intron | 35.0% | |
| CATTAACAGCTTCAGATGTT+AGG | + | chr1_1:26936312-26936331 | None:intergenic | 35.0% | |
| ATGACACAATCTTACACCAA+TGG | - | chr1_1:26930224-26930243 | Msa0016180:intron | 35.0% | |
| !! | TTACACCAATGGCTATTTCT+TGG | - | chr1_1:26930235-26930254 | Msa0016180:intron | 35.0% |
| ACTTACCAAGAAATAGCCAT+TGG | + | chr1_1:26930243-26930262 | None:intergenic | 35.0% | |
| GTAACCACTGTTTCAAATCA+TGG | + | chr1_1:26936452-26936471 | None:intergenic | 35.0% | |
| TGTTCTCTTGAAAACTCACT+TGG | + | chr1_1:26936474-26936493 | None:intergenic | 35.0% | |
| !! | CAATAAGGGTTGGTAATGAA+AGG | - | chr1_1:26936520-26936539 | Msa0016180:intron | 35.0% |
| AGGCTGACACAATACTTCTT+AGG | + | chr1_1:26924658-26924677 | None:intergenic | 40.0% | |
| !! | AGAAGTATTGTGTCAGCCTT+TGG | - | chr1_1:26924659-26924678 | Msa0016180:intron | 40.0% |
| AACCGTTAGCCATAGACTAT+CGG | - | chr1_1:26925224-26925243 | Msa0016180:CDS | 40.0% | |
| AAAGGTAGGCTAATGCACTA+TGG | + | chr1_1:26925278-26925297 | None:intergenic | 40.0% | |
| CAATATCCAGTGTTCAACCA+TGG | - | chr1_1:26925442-26925461 | Msa0016180:CDS | 40.0% | |
| GGTTTCAATGTGTTGTACCA+TGG | + | chr1_1:26925462-26925481 | None:intergenic | 40.0% | |
| TGCCTCATTGAAGATATGGT+TGG | + | chr1_1:26925509-26925528 | None:intergenic | 40.0% | |
| GGTTTGCCTCATTGAAGATA+TGG | + | chr1_1:26925513-26925532 | None:intergenic | 40.0% | |
| CAGTACCATTTGAGAGTCTA+AGG | + | chr1_1:26925751-26925770 | None:intergenic | 40.0% | |
| !! | CTTGTCCTTTGAGATTGCTT+AGG | + | chr1_1:26926556-26926575 | None:intergenic | 40.0% |
| TTGATGGGAGTTGTCCTTAT+GGG | + | chr1_1:26927089-26927108 | None:intergenic | 40.0% | |
| TTTGATGGGAGTTGTCCTTA+TGG | + | chr1_1:26927090-26927109 | None:intergenic | 40.0% | |
| !!! | GGGGGTGATGTTTATTTTGA+TGG | + | chr1_1:26927105-26927124 | None:intergenic | 40.0% |
| !!! | TTTTTTTGGTGTTCCTTCGG+TGG | + | chr1_1:26927305-26927324 | None:intergenic | 40.0% |
| !! | CTCTGGTTCAAGTTTGGTTT+TGG | + | chr1_1:26927330-26927349 | None:intergenic | 40.0% |
| ! | TCAGTTCTCTGGTTCAAGTT+TGG | + | chr1_1:26927336-26927355 | None:intergenic | 40.0% |
| !! | ATCGCTTTTGATTCGAGATC+GGG | + | chr1_1:26927361-26927380 | None:intergenic | 40.0% |
| !! | GATCGCTTTTGATTCGAGAT+CGG | + | chr1_1:26927362-26927381 | None:intergenic | 40.0% |
| GATCTCGAATCAAAAGCGAT+CGG | - | chr1_1:26927361-26927380 | Msa0016180:intron | 40.0% | |
| ACTTCAGCACCAAATCAGAA+GGG | - | chr1_1:26927392-26927411 | Msa0016180:intron | 40.0% | |
| ATAGTGTGCTGGATTCTGAT+GGG | + | chr1_1:26927513-26927532 | None:intergenic | 40.0% | |
| TATAGTGTGCTGGATTCTGA+TGG | + | chr1_1:26927514-26927533 | None:intergenic | 40.0% | |
| GGAGCAGACATCAATCAAAA+AGG | - | chr1_1:26927561-26927580 | Msa0016180:intron | 40.0% | |
| ! | CTAGCCCTTGTTTCAGTTTA+GGG | + | chr1_1:26927634-26927653 | None:intergenic | 40.0% |
| ATGACGGCCACCAATAAAAA+TGG | - | chr1_1:26927680-26927699 | Msa0016180:intron | 40.0% | |
| !!! | TTGTGGGCCATTTTTATTGG+TGG | + | chr1_1:26927690-26927709 | None:intergenic | 40.0% |
| ATCTATGGCAGTTAGCATAG+TGG | + | chr1_1:26927727-26927746 | None:intergenic | 40.0% | |
| ! | ATTCAATGCGCCACCTTTTA+GGG | - | chr1_1:26928010-26928029 | Msa0016180:intron | 40.0% |
| AGATGACGAGATCGATGATT+GGG | + | chr1_1:26928114-26928133 | None:intergenic | 40.0% | |
| TAGATGACGAGATCGATGAT+TGG | + | chr1_1:26928115-26928134 | None:intergenic | 40.0% | |
| AGCGTTGCATCTCTAATCAT+TGG | + | chr1_1:26928163-26928182 | None:intergenic | 40.0% | |
| CGCTGAAGATAGACTTCAAT+CGG | - | chr1_1:26928179-26928198 | Msa0016180:intron | 40.0% | |
| TCATCTTCATCCAACAGACA+TGG | - | chr1_1:26928229-26928248 | Msa0016180:intron | 40.0% | |
| ATGGCAGATTAAGGGATCAA+AGG | - | chr1_1:26928923-26928942 | Msa0016180:intron | 40.0% | |
| TGGCAGATTAAGGGATCAAA+GGG | - | chr1_1:26928924-26928943 | Msa0016180:intron | 40.0% | |
| !! | CTTTGGTGTTGGATTGAACT+TGG | + | chr1_1:26929075-26929094 | None:intergenic | 40.0% |
| !! | TGGTGTTACTACTTTGGTGT+TGG | + | chr1_1:26929086-26929105 | None:intergenic | 40.0% |
| !! | GTTCAGTCTGTTTTTCTCTC+AGG | + | chr1_1:26929258-26929277 | None:intergenic | 40.0% |
| GATGCTAGTGAGTGAGTATT+GGG | + | chr1_1:26929317-26929336 | None:intergenic | 40.0% | |
| TGATGCTAGTGAGTGAGTAT+TGG | + | chr1_1:26929318-26929337 | None:intergenic | 40.0% | |
| GAGGGTTCCTAAGATATATG+TGG | - | chr1_1:26929520-26929539 | Msa0016180:intron | 40.0% | |
| AAGTGATGAAGAGAGTGATG+AGG | - | chr1_1:26929865-26929884 | Msa0016180:CDS | 40.0% | |
| !! | TTTTCTAGCCTTCTTCACCA+TGG | + | chr1_1:26930150-26930169 | None:intergenic | 40.0% |
| GAAGGCTAGAAAATACCCAA+TGG | - | chr1_1:26930157-26930176 | Msa0016180:intron | 40.0% | |
| GTAACCACTGTTCCAAATCA+TGG | + | chr1_1:26930321-26930340 | None:intergenic | 40.0% | |
| AAAAGATCTTGTATGGGAGG+TGG | - | chr1_1:26930448-26930467 | Msa0016180:CDS | 40.0% | |
| GAGGTGGTTGGAAAATATTC+AGG | - | chr1_1:26930464-26930483 | Msa0016180:intron | 40.0% | |
| ATTGTCACTATTACTCGTGC+CGG | - | chr1_1:26930556-26930575 | Msa0016180:CDS | 40.0% | |
| GTTAGTAGCCTAAGTTATCC+AGG | - | chr1_1:26930701-26930720 | Msa0016180:CDS | 40.0% | |
| CTCATATGAAATGGACCGAA+GGG | - | chr1_1:26931365-26931384 | Msa0016180:CDS | 40.0% | |
| TCATATGAAATGGACCGAAG+GGG | - | chr1_1:26931366-26931385 | Msa0016180:CDS | 40.0% | |
| TAATCAATACCCGTAAGCAC+GGG | + | chr1_1:26931539-26931558 | None:intergenic | 40.0% | |
| GAGAATCGATGGAGAAAAAG+AGG | + | chr1_1:26932067-26932086 | None:intergenic | 40.0% | |
| !! | TCTCCATCGATTCTCATTAG+GGG | - | chr1_1:26932072-26932091 | Msa0016180:intron | 40.0% |
| ! | TTAGGGGTGTGCAAAAAATG+TGG | - | chr1_1:26932088-26932107 | Msa0016180:intron | 40.0% |
| ! | GTCCAGTTTGGTTCAGTTTA+TGG | + | chr1_1:26932129-26932148 | None:intergenic | 40.0% |
| !!! | TCTCGAACTGGTTTTCAAAC+CGG | + | chr1_1:26933373-26933392 | None:intergenic | 40.0% |
| GAACCAGATTATTCTCGAAC+TGG | + | chr1_1:26933385-26933404 | None:intergenic | 40.0% | |
| ATTTCGAACCAGTTTCGAAC+CGG | + | chr1_1:26933431-26933450 | None:intergenic | 40.0% | |
| ! | ACCGGTTCAAAACTGTAAAC+CGG | - | chr1_1:26933457-26933476 | Msa0016180:intron | 40.0% |
| !!! | ACCGGTTTACAGTTTTGAAC+CGG | + | chr1_1:26933461-26933480 | None:intergenic | 40.0% |
| !! | ATGAGAATTAGGGGTGTTCA+TGG | + | chr1_1:26933592-26933611 | None:intergenic | 40.0% |
| CGAAGGATGATGAGAATTAG+GGG | + | chr1_1:26933601-26933620 | None:intergenic | 40.0% | |
| GACGAAGGATGATGAGAATT+AGG | + | chr1_1:26933603-26933622 | None:intergenic | 40.0% | |
| AACGAGTGATCAATCGGAAA+CGG | + | chr1_1:26933646-26933665 | None:intergenic | 40.0% | |
| TGGTGAAGATAGACTTCGAT+CGG | - | chr1_1:26933687-26933706 | Msa0016180:intron | 40.0% | |
| TCATCTTCATCGAACAGACA+TGG | - | chr1_1:26933755-26933774 | Msa0016180:intron | 40.0% | |
| ATGGATCAGCAAAAGAAAGC+AGG | + | chr1_1:26934990-26935009 | None:intergenic | 40.0% | |
| AATGTGTGAGATGAGGTTGA+TGG | + | chr1_1:26935009-26935028 | None:intergenic | 40.0% | |
| !! | GATTTAAGAAGTGCTTGGGT+TGG | + | chr1_1:26935138-26935157 | None:intergenic | 40.0% |
| !! | GGCTAAGGCTTTAAGAAATG+AGG | + | chr1_1:26935235-26935254 | None:intergenic | 40.0% |
| GAGGGTTCCTAAGAAATATG+TGG | - | chr1_1:26935454-26935473 | Msa0016180:intron | 40.0% | |
| AAGTGATGACAGTTCAGATG+AGG | - | chr1_1:26935817-26935836 | Msa0016180:intron | 40.0% | |
| !!! | CTTGTCCTTTTAGCTTGGTT+TGG | + | chr1_1:26935851-26935870 | None:intergenic | 40.0% |
| TGGCAAAAGAAAAGCGAGTA+TGG | - | chr1_1:26935874-26935893 | Msa0016180:intron | 40.0% | |
| AGTTAATGCCTAAACTTGGC+AGG | - | chr1_1:26936247-26936266 | Msa0016180:intron | 40.0% | |
| TGTTACTACCTGCCAAGTTT+AGG | + | chr1_1:26936258-26936277 | None:intergenic | 40.0% | |
| CAAAGTAGCAATGGTGAAGA+AGG | - | chr1_1:26936276-26936295 | Msa0016180:intron | 40.0% | |
| ! | GAGGTGAGTTTGGGATATTA+TGG | - | chr1_1:26936549-26936568 | Msa0016180:intron | 40.0% |
| AGCCGATAGTCTATGGCTAA+CGG | + | chr1_1:26925229-26925248 | None:intergenic | 45.0% | |
| GTTGTACCATGGTTGAACAC+TGG | + | chr1_1:26925451-26925470 | None:intergenic | 45.0% | |
| AGGGAGAATCTGTTGACATC+AGG | - | chr1_1:26926801-26926820 | Msa0016180:intron | 45.0% | |
| GTTGGGAGAATAGAAGCCAT+TGG | + | chr1_1:26926876-26926895 | None:intergenic | 45.0% | |
| GTTCTTCTTGTGCAGAGAAC+TGG | + | chr1_1:26926982-26927001 | None:intergenic | 45.0% | |
| TGCACAAGAAGAACAGAGAC+CGG | - | chr1_1:26926988-26927007 | Msa0016180:intron | 45.0% | |
| ! | ACAAGGTGTTTGGTGAGTAG+TGG | + | chr1_1:26927186-26927205 | None:intergenic | 45.0% |
| ! | GGACTGGGTTCTCTTTTACA+AGG | + | chr1_1:26927203-26927222 | None:intergenic | 45.0% |
| !! | GTAACTCAGTGTTGGTGATG+AGG | + | chr1_1:26927224-26927243 | None:intergenic | 45.0% |
| ! | TCTTTAGAGAAGGGGTTCCT+CGG | + | chr1_1:26927249-26927268 | None:intergenic | 45.0% |
| !! | ATTTGGTGCTGAAGTCTGGT+GGG | + | chr1_1:26927387-26927406 | None:intergenic | 45.0% |
| !! | TCTGATTTGGTGCTGAAGTC+TGG | + | chr1_1:26927391-26927410 | None:intergenic | 45.0% |
| GACTTCAGCACCAAATCAGA+AGG | - | chr1_1:26927391-26927410 | Msa0016180:intron | 45.0% | |
| !! | GGTCATTTGGCTTTGAGATC+GGG | + | chr1_1:26927488-26927507 | None:intergenic | 45.0% |
| !! | CGGTCATTTGGCTTTGAGAT+CGG | + | chr1_1:26927489-26927508 | None:intergenic | 45.0% |
| CGATCTCAAAGCCAAATGAC+CGG | - | chr1_1:26927487-26927506 | Msa0016180:intron | 45.0% | |
| ! | GCTAGCCCTTGTTTCAGTTT+AGG | + | chr1_1:26927635-26927654 | None:intergenic | 45.0% |
| ! | TGGTGGCCGTCATGTTATTT+GGG | + | chr1_1:26927673-26927692 | None:intergenic | 45.0% |
| ! | TTGGTGGCCGTCATGTTATT+TGG | + | chr1_1:26927674-26927693 | None:intergenic | 45.0% |
| ! | ATGGCAGTTAGCATAGTGGA+GGG | + | chr1_1:26927723-26927742 | None:intergenic | 45.0% |
| TATGGCAGTTAGCATAGTGG+AGG | + | chr1_1:26927724-26927743 | None:intergenic | 45.0% | |
| GAATCAGAGAAGACTGAGTG+TGG | + | chr1_1:26927994-26928013 | None:intergenic | 45.0% | |
| ! | GATTCAATGCGCCACCTTTT+AGG | - | chr1_1:26928009-26928028 | Msa0016180:intron | 45.0% |
| CATGGAACAACGACCCTAAA+AGG | + | chr1_1:26928026-26928045 | None:intergenic | 45.0% | |
| !!! | CTTTTAGGGTCGTTGTTCCA+TGG | - | chr1_1:26928024-26928043 | Msa0016180:intron | 45.0% |
| GGATCAAAGGGAAAGACACA+CGG | - | chr1_1:26928936-26928955 | Msa0016180:intron | 45.0% | |
| !! | AGTGAGTGAGTATTGGGCTA+AGG | + | chr1_1:26929311-26929330 | None:intergenic | 45.0% |
| AGGTAGTAACAAAGTGGCCA+TGG | - | chr1_1:26930130-26930149 | Msa0016180:intron | 45.0% | |
| ! | CAGCTTCAGATTGTGCCATT+GGG | + | chr1_1:26930175-26930194 | None:intergenic | 45.0% |
| ACAGCTTCAGATTGTGCCAT+TGG | + | chr1_1:26930176-26930195 | None:intergenic | 45.0% | |
| !! | GGTTGGTAAAGAAAGGAGTG+TGG | - | chr1_1:26930396-26930415 | Msa0016180:CDS | 45.0% |
| CACGACCTTCTGTACAATAC+AGG | + | chr1_1:26930876-26930895 | None:intergenic | 45.0% | |
| GTATTTGCAGAGTGCACCAA+AGG | - | chr1_1:26931025-26931044 | Msa0016180:CDS | 45.0% | |
| TTGTGGAGTTGAAAATGGGG+AGG | - | chr1_1:26931078-26931097 | Msa0016180:CDS | 45.0% | |
| TGAAAATGGGGAGGAAGTCA+TGG | - | chr1_1:26931087-26931106 | Msa0016180:CDS | 45.0% | |
| CCTTCGGTCCATTTCATATG+AGG | + | chr1_1:26931367-26931386 | None:intergenic | 45.0% | |
| CCTCATATGAAATGGACCGA+AGG | - | chr1_1:26931364-26931383 | Msa0016180:CDS | 45.0% | |
| ACAATGCTAACCCGTGCTTA+CGG | - | chr1_1:26931526-26931545 | Msa0016180:intron | 45.0% | |
| TAACCATGGTCTCAGGACAT+CGG | - | chr1_1:26931666-26931685 | Msa0016180:intron | 45.0% | |
| AATGAGTACAGAGATCGCCA+TGG | + | chr1_1:26932028-26932047 | None:intergenic | 45.0% | |
| ACACCCCTAATGAGAATCGA+TGG | + | chr1_1:26932078-26932097 | None:intergenic | 45.0% | |
| !! | ACTGTAAACCGGTTCGAAAC+TGG | - | chr1_1:26933420-26933439 | Msa0016180:intron | 45.0% |
| GGTAGATGACGAGATCGATT+GGG | + | chr1_1:26933625-26933644 | None:intergenic | 45.0% | |
| TCTTCATCGAACAGACATGG+CGG | - | chr1_1:26933758-26933777 | Msa0016180:intron | 45.0% | |
| AATCCTTCACCAACCTACAG+AGG | - | chr1_1:26935154-26935173 | Msa0016180:intron | 45.0% | |
| AGCTGAAGACACAGAAGAAG+AGG | - | chr1_1:26935727-26935746 | Msa0016180:intron | 45.0% | |
| GCTGAAGACACAGAAGAAGA+GGG | - | chr1_1:26935728-26935747 | Msa0016180:intron | 45.0% | |
| TGATGACAGTTCAGATGAGG+TGG | - | chr1_1:26935820-26935839 | Msa0016180:intron | 45.0% | |
| ACCACCCAACCAAAATTCTC+AGG | - | chr1_1:26935905-26935924 | Msa0016180:intron | 45.0% | |
| !!! | ACCTGAGAATTTTGGTTGGG+TGG | + | chr1_1:26935909-26935928 | None:intergenic | 45.0% |
| GGAACTGCAACAATAAGGGT+TGG | - | chr1_1:26936510-26936529 | Msa0016180:intron | 45.0% | |
| !! | GGTTGGTAATGAAAGGAGTG+TGG | - | chr1_1:26936527-26936546 | Msa0016180:intron | 45.0% |
| ! | TGGTAATGAAAGGAGTGTGG+AGG | - | chr1_1:26936530-26936549 | Msa0016180:intron | 45.0% |
| !!! | TAAAAATTCTAAATTTTTTT+GGG | + | chr1_1:26925990-26926009 | None:intergenic | 5.0% |
| !!! | TTAAAAATTCTAAATTTTTT+TGG | + | chr1_1:26925991-26926010 | None:intergenic | 5.0% |
| !!! | AAAAAATTCTAAAATTTTTT+AGG | - | chr1_1:26926077-26926096 | Msa0016180:intron | 5.0% |
| !! | TATATATATATATATATATG+AGG | - | chr1_1:26926781-26926800 | Msa0016180:intron | 5.0% |
| !! | ATATATATATATATATATGA+GGG | - | chr1_1:26926782-26926801 | Msa0016180:intron | 5.0% |
| !! | ATATATATATATATATATGT+TGG | + | chr1_1:26926764-26926783 | None:intergenic | 5.0% |
| !! | AATATATGATAAAAAAAAAT+TGG | - | chr1_1:26930068-26930087 | Msa0016180:intron | 5.0% |
| !!! | GCAGGGGTGTCTTTGTTTTC+AGG | + | chr1_1:26927058-26927077 | None:intergenic | 50.0% |
| !! | CTTATGGGTGTTGATCGCAG+GGG | + | chr1_1:26927074-26927093 | None:intergenic | 50.0% |
| !! | CCTTATGGGTGTTGATCGCA+GGG | + | chr1_1:26927075-26927094 | None:intergenic | 50.0% |
| !! | TCCTTATGGGTGTTGATCGC+AGG | + | chr1_1:26927076-26927095 | None:intergenic | 50.0% |
| ! | AGTAGTGGCGACGAGTGTTT+TGG | + | chr1_1:26927171-26927190 | None:intergenic | 50.0% |
| !! | CAGTGTTGGTGATGAGGACT+GGG | + | chr1_1:26927218-26927237 | None:intergenic | 50.0% |
| !! | TCAGTGTTGGTGATGAGGAC+TGG | + | chr1_1:26927219-26927238 | None:intergenic | 50.0% |
| CCTCGGATGTAACTCAGTGT+TGG | + | chr1_1:26927232-26927251 | None:intergenic | 50.0% | |
| CCAACACTGAGTTACATCCG+AGG | - | chr1_1:26927229-26927248 | Msa0016180:intron | 50.0% | |
| !! | GATTTGGTGCTGAAGTCTGG+TGG | + | chr1_1:26927388-26927407 | None:intergenic | 50.0% |
| !! | TTAGGGGTGCCCTTCTGATT+TGG | + | chr1_1:26927404-26927423 | None:intergenic | 50.0% |
| TCTGGTAGACCAGTGGTTAG+GGG | + | chr1_1:26927420-26927439 | None:intergenic | 50.0% | |
| CTCTGGTAGACCAGTGGTTA+GGG | + | chr1_1:26927421-26927440 | None:intergenic | 50.0% | |
| TCTCTGGTAGACCAGTGGTT+AGG | + | chr1_1:26927422-26927441 | None:intergenic | 50.0% | |
| GTGTTTCTCTGGTAGACCAG+TGG | + | chr1_1:26927427-26927446 | None:intergenic | 50.0% | |
| GATCGGGAGTTGGAGTTTAG+TGG | + | chr1_1:26927472-26927491 | None:intergenic | 50.0% | |
| !! | TTGGCTTTGAGATCGGGAGT+TGG | + | chr1_1:26927482-26927501 | None:intergenic | 50.0% |
| ! | ATTCTGATGGGCCGGTCATT+TGG | + | chr1_1:26927501-26927520 | None:intergenic | 50.0% |
| CGGTCTTGCTTATAGTGTGC+TGG | + | chr1_1:26927524-26927543 | None:intergenic | 50.0% | |
| AAGACCGACAACGTGACTTG+CGG | - | chr1_1:26927537-26927556 | Msa0016180:intron | 50.0% | |
| ! | TTAGCATAGTGGAGGGTGGT+TGG | + | chr1_1:26927716-26927735 | None:intergenic | 50.0% |
| GGAACAACGACCCTAAAAGG+TGG | + | chr1_1:26928023-26928042 | None:intergenic | 50.0% | |
| CGAAGGAGGATGAGAATCGA+TGG | + | chr1_1:26928090-26928109 | None:intergenic | 50.0% | |
| ATCGATGATTGGGACGAAGG+AGG | + | chr1_1:26928104-26928123 | None:intergenic | 50.0% | |
| GAGATCGATGATTGGGACGA+AGG | + | chr1_1:26928107-26928126 | None:intergenic | 50.0% | |
| AACGACACTGCCATGTCTGT+TGG | + | chr1_1:26928242-26928261 | None:intergenic | 50.0% | |
| GAGCTTGGCTGAACTGCAAT+CGG | + | chr1_1:26928268-26928287 | None:intergenic | 50.0% | |
| GGCTAAGGCTTAGAGAAGTG+AGG | + | chr1_1:26929296-26929315 | None:intergenic | 50.0% | |
| GGTGCTAAAGCCACTGAAGA+AGG | - | chr1_1:26929791-26929810 | Msa0016180:CDS | 50.0% | |
| CAAAGTGGCCATGGTGAAGA+AGG | - | chr1_1:26930139-26930158 | Msa0016180:intron | 50.0% | |
| GGGACTGCAACAATAAGGGT+TGG | - | chr1_1:26930379-26930398 | Msa0016180:CDS | 50.0% | |
| GGAGTGTGGAAGTGAGTTTG+AGG | - | chr1_1:26930410-26930429 | Msa0016180:CDS | 50.0% | |
| GATCTTGTATGGGAGGTGGT+TGG | - | chr1_1:26930452-26930471 | Msa0016180:CDS | 50.0% | |
| ! | CTTTCGGATTGGGTCGTTTC+CGG | + | chr1_1:26930578-26930597 | None:intergenic | 50.0% |
| TTTGGTGAAGAACACAGCCC+CGG | - | chr1_1:26930921-26930940 | Msa0016180:intron | 50.0% | |
| !! | ATGAGAGTATTCGTGGCTGC+AGG | - | chr1_1:26931129-26931148 | Msa0016180:CDS | 50.0% |
| GCTGCAGGTTCAGTAAAGGT+TGG | - | chr1_1:26931144-26931163 | Msa0016180:CDS | 50.0% | |
| CAATGCTAACCCGTGCTTAC+GGG | - | chr1_1:26931527-26931546 | Msa0016180:intron | 50.0% | |
| TAACCGATGTCCTGAGACCA+TGG | + | chr1_1:26931672-26931691 | None:intergenic | 50.0% | |
| CATGGAACAATGACCCGAAC+CGG | + | chr1_1:26932010-26932029 | None:intergenic | 50.0% | |
| !! | AAACCGGTTCTGAACCGAAC+TGG | - | chr1_1:26933473-26933492 | Msa0016180:intron | 50.0% |
| GTTCCAGTTCGGTTCAGAAC+CGG | + | chr1_1:26933479-26933498 | None:intergenic | 50.0% | |
| ! | GTTCTGAACCGAACTGGAAC+TGG | - | chr1_1:26933479-26933498 | Msa0016180:intron | 50.0% |
| CGGTAGATGACGAGATCGAT+TGG | + | chr1_1:26933626-26933645 | None:intergenic | 50.0% | |
| GCGGTGTAGGCAATTCTGTA+AGG | - | chr1_1:26933777-26933796 | Msa0016180:intron | 50.0% | |
| GTGTTTGTGCCTCTGTAGGT+TGG | + | chr1_1:26935166-26935185 | None:intergenic | 50.0% | |
| GGTAGTGTTTGTGCCTCTGT+AGG | + | chr1_1:26935170-26935189 | None:intergenic | 50.0% | |
| GAGGCACAAACACTACCACA+CGG | - | chr1_1:26935173-26935192 | Msa0016180:intron | 50.0% | |
| !! | AAGTTGATGGATTGGCCGTG+TGG | + | chr1_1:26935191-26935210 | None:intergenic | 50.0% |
| ! | AAGGAGTGTGGAGGTGAGTT+TGG | - | chr1_1:26936539-26936558 | Msa0016180:intron | 50.0% |
| ! | AGGAGTGTGGAGGTGAGTTT+GGG | - | chr1_1:26936540-26936559 | Msa0016180:intron | 50.0% |
| CCCTGCGATCAACACCCATA+AGG | - | chr1_1:26927072-26927091 | Msa0016180:intron | 55.0% | |
| ! | TTGGTGTTCCTTCGGTGGAC+TGG | + | chr1_1:26927300-26927319 | None:intergenic | 55.0% |
| GAGATCGGGAGTCAGTTCTC+TGG | + | chr1_1:26927347-26927366 | None:intergenic | 55.0% | |
| !! | GGTTGGCTTCGGTGTTTCTC+TGG | + | chr1_1:26927438-26927457 | None:intergenic | 55.0% |
| ! | TGTGCTGGATTCTGATGGGC+CGG | + | chr1_1:26927509-26927528 | None:intergenic | 55.0% |
| TCCACCGCAAGTCACGTTGT+CGG | + | chr1_1:26927544-26927563 | None:intergenic | 55.0% | |
| ! | GGAGGGTGGTTGGTTGTTGT+GGG | + | chr1_1:26927706-26927725 | None:intergenic | 55.0% |
| ! | TGGAGGGTGGTTGGTTGTTG+TGG | + | chr1_1:26927707-26927726 | None:intergenic | 55.0% |
| ! | GCAGTTAGCATAGTGGAGGG+TGG | + | chr1_1:26927720-26927739 | None:intergenic | 55.0% |
| !! | AGAGAAACGAGAGAGCGCCA+TGG | + | chr1_1:26928044-26928063 | None:intergenic | 55.0% |
| TGCAGTTCAGCCAAGCTCAG+CGG | - | chr1_1:26928270-26928289 | Msa0016180:intron | 55.0% | |
| AGCCAAGCTCAGCGGCAATT+CGG | - | chr1_1:26928278-26928297 | Msa0016180:intron | 55.0% | |
| TACCGAATTGCCGCTGAGCT+TGG | + | chr1_1:26928283-26928302 | None:intergenic | 55.0% | |
| AGCTCAGCGGCAATTCGGTA+AGG | - | chr1_1:26928283-26928302 | Msa0016180:intron | 55.0% | |
| CGTGGCTGCAGGTTCAGTAA+AGG | - | chr1_1:26931140-26931159 | Msa0016180:CDS | 55.0% | |
| CAAACGGTGGCGCGTTGAAT+CGG | + | chr1_1:26931974-26931993 | None:intergenic | 55.0% | |
| ! | CGGTTCGGGTCATTGTTCCA+TGG | - | chr1_1:26932008-26932027 | Msa0016180:intron | 55.0% |
| GACGAGATCGATTGGGACGA+AGG | + | chr1_1:26933618-26933637 | None:intergenic | 55.0% | |
| TCGAACAGACATGGCGGTGT+AGG | - | chr1_1:26933764-26933783 | Msa0016180:intron | 55.0% | |
| !! | GTGCCTCTGTAGGTTGGTGA+AGG | + | chr1_1:26935160-26935179 | None:intergenic | 55.0% |
| ! | TGGACTGGAGGTTGCGTGGT+GGG | + | chr1_1:26927285-26927304 | None:intergenic | 60.0% |
| !! | GTGTTCCTTCGGTGGACTGG+AGG | + | chr1_1:26927297-26927316 | None:intergenic | 60.0% |
| !! | AGAAGGGCACCCCTAACCAC+TGG | - | chr1_1:26927408-26927427 | Msa0016180:intron | 60.0% |
| ! | ACCGACAACGTGACTTGCGG+TGG | - | chr1_1:26927540-26927559 | Msa0016180:intron | 60.0% |
| GTGAAGAACACAGCCCCGGT+AGG | - | chr1_1:26930925-26930944 | Msa0016180:intron | 60.0% | |
| !! | TGGCGCGTTGGTTCAAACGG+TGG | + | chr1_1:26931987-26932006 | None:intergenic | 60.0% |
| !! | CGGTGGCGCGTTGGTTCAAA+CGG | + | chr1_1:26931990-26932009 | None:intergenic | 60.0% |
| CGTTTGAACCAACGCGCCAC+CGG | - | chr1_1:26931988-26932007 | Msa0016180:intron | 60.0% | |
| GGAACAATGACCCGAACCGG+TGG | + | chr1_1:26932007-26932026 | None:intergenic | 60.0% | |
| GACTGGAGGTTGCGTGGTGG+GGG | + | chr1_1:26927283-26927302 | None:intergenic | 65.0% | |
| GGACTGGAGGTTGCGTGGTG+GGG | + | chr1_1:26927284-26927303 | None:intergenic | 65.0% | |
| !! | GTGGACTGGAGGTTGCGTGG+TGG | + | chr1_1:26927286-26927305 | None:intergenic | 65.0% |
| !! | TCGGTGGACTGGAGGTTGCG+TGG | + | chr1_1:26927289-26927308 | None:intergenic | 65.0% |
| CGCAACCTCCAGTCCACCGA+AGG | - | chr1_1:26927289-26927308 | Msa0016180:intron | 65.0% | |
| ! | GAACCAACGCGCCACCGGTT+CGG | - | chr1_1:26931993-26932012 | Msa0016180:intron | 65.0% |
| !! | AACCAACGCGCCACCGGTTC+GGG | - | chr1_1:26931994-26932013 | Msa0016180:intron | 65.0% |
| GACCCGAACCGGTGGCGCGT+TGG | + | chr1_1:26931999-26932018 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 26924348 | 26936578 | 26924348 | ID=Msa0016180;Name=Msa0016180 |
| chr1_1 | mRNA | 26924348 | 26936578 | 26924348 | ID=Msa0016180-mRNA-1;Parent=Msa0016180;Name=Msa0016180-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0.5|0.23|1|0.41|0.38|13|0|537 |
| chr1_1 | exon | 26936574 | 26936578 | 26936574 | ID=Msa0016180-mRNA-1:exon:9051;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26932627 | 26932753 | 26932627 | ID=Msa0016180-mRNA-1:exon:9050;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26931310 | 26931405 | 26931310 | ID=Msa0016180-mRNA-1:exon:9049;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26930985 | 26931198 | 26930985 | ID=Msa0016180-mRNA-1:exon:9048;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26930670 | 26930794 | 26930670 | ID=Msa0016180-mRNA-1:exon:9047;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26930495 | 26930592 | 26930495 | ID=Msa0016180-mRNA-1:exon:9046;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26930319 | 26930473 | 26930319 | ID=Msa0016180-mRNA-1:exon:9045;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26929984 | 26930039 | 26929984 | ID=Msa0016180-mRNA-1:exon:9044;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26929689 | 26929891 | 26929689 | ID=Msa0016180-mRNA-1:exon:9043;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26925399 | 26925471 | 26925399 | ID=Msa0016180-mRNA-1:exon:9042;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26925036 | 26925264 | 26925036 | ID=Msa0016180-mRNA-1:exon:9041;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26924539 | 26924657 | 26924539 | ID=Msa0016180-mRNA-1:exon:9040;Parent=Msa0016180-mRNA-1 |
| chr1_1 | exon | 26924348 | 26924461 | 26924348 | ID=Msa0016180-mRNA-1:exon:9039;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26936574 | 26936578 | 26936574 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26932627 | 26932753 | 26932627 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26931310 | 26931405 | 26931310 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26930985 | 26931198 | 26930985 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26930670 | 26930794 | 26930670 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26930495 | 26930592 | 26930495 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26930319 | 26930473 | 26930319 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26929984 | 26930039 | 26929984 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26929689 | 26929891 | 26929689 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26925399 | 26925471 | 26925399 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26925036 | 26925264 | 26925036 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26924539 | 26924657 | 26924539 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| chr1_1 | CDS | 26924348 | 26924461 | 26924348 | ID=Msa0016180-mRNA-1:cds;Parent=Msa0016180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
