AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0021550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021550 MtrunA17_Chr5g0422511 93.057 821 52 4 1 816 1 821 0.0 1582
Msa0021550 MtrunA17_Chr1g0173701 95.904 293 12 0 485 777 111 403 0.0 593
Msa0021550 MtrunA17_Chr1g0173701 100.000 32 0 0 1 32 1 32 2.35e-12 69.7
Msa0021550 MtrunA17_Chr8g0343741 44.371 302 166 2 444 744 964 1264 5.63e-72 258
Msa0021550 MtrunA17_Chr2g0334291 39.216 357 188 5 426 754 1725 2080 3.65e-71 256
Msa0021550 MtrunA17_Chr2g0334291 27.833 406 256 12 17 403 1231 1618 2.79e-31 132
Msa0021550 MtrunA17_Chr5g0433321 37.908 306 183 7 445 746 552 854 1.08e-49 189
Msa0021550 MtrunA17_Chr5g0433371 36.424 302 187 5 445 743 576 875 2.27e-47 182
Msa0021550 MtrunA17_Chr5g0433471 34.967 306 193 6 445 746 574 877 4.10e-46 178
Msa0021550 MtrunA17_Chr3g0109551 37.500 312 180 8 444 746 608 913 1.14e-45 177
Msa0021550 MtrunA17_Chr5g0400101 30.679 427 255 12 344 746 500 909 1.56e-45 177
Msa0021550 MtrunA17_Chr5g0433421 34.754 305 189 8 450 748 664 964 4.15e-44 172
Msa0021550 MtrunA17_Chr8g0375181 33.429 350 210 8 442 783 623 957 1.38e-43 171
Msa0021550 MtrunA17_Chr3g0109541 33.987 306 196 6 445 746 575 878 1.40e-43 170
Msa0021550 MtrunA17_Chr3g0094211 31.006 358 233 6 440 793 537 884 5.55e-43 169
Msa0021550 MtrunA17_Chr8g0375151 32.958 355 208 10 441 785 517 851 3.43e-42 167
Msa0021550 MtrunA17_Chr8g0375191 35.161 310 182 8 443 744 552 850 2.75e-41 164
Msa0021550 MtrunA17_Chr5g0433361 34.768 302 174 8 450 743 559 845 2.09e-40 160
Msa0021550 MtrunA17_Chr5g0433511 33.444 302 174 8 450 746 598 877 1.61e-37 151
Msa0021550 MtrunA17_Chr1g0165651 29.075 454 255 12 326 734 490 921 2.15e-35 144
Msa0021550 MtrunA17_Chr7g0257921 33.962 318 172 10 449 748 344 641 8.96e-33 135
Msa0021550 MtrunA17_Chr2g0304151 29.087 416 227 16 364 749 445 822 1.56e-29 126
Msa0021550 MtrunA17_Chr5g0394941 29.017 417 226 16 364 749 445 822 2.02e-29 125
Msa0021550 MtrunA17_Chr5g0433341 37.647 170 103 3 450 617 10 178 6.59e-24 100
Msa0021550 MtrunA17_Chr5g0433331 35.714 112 70 2 637 746 9 120 1.36e-18 84.0
Msa0021550 MtrunA17_Chr1g0165031 23.885 381 241 16 440 796 1090 1445 1.51e-13 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0021550 AT4G15570.3 56.620 793 302 12 1 767 1 777 0.0 896
Msa0021550 AT4G15570.1 56.620 793 302 12 1 767 1 777 0.0 896
Msa0021550 AT4G15570.2 58.576 688 255 8 103 767 8 688 0.0 824
Msa0021550 AT4G15570.4 58.576 688 255 8 103 767 8 688 0.0 824
Msa0021550 AT2G19120.1 44.224 303 167 2 444 745 744 1045 1.66e-72 258
Msa0021550 AT1G16800.1 40.118 339 177 5 445 759 1560 1896 4.47e-71 256
Msa0021550 AT1G16800.1 28.414 454 264 16 17 438 1044 1468 5.80e-34 141
Msa0021550 AT1G16800.3 40.118 339 177 5 445 759 1602 1938 6.13e-71 255
Msa0021550 AT1G16800.3 28.637 433 253 15 17 422 1086 1489 7.26e-34 141
Msa0021550 AT1G16800.2 40.118 339 177 5 445 759 1672 2008 7.08e-71 255
Msa0021550 AT1G16800.2 28.414 454 264 16 17 438 1156 1580 6.56e-34 141
Msa0021550 AT4G30100.2 44.224 303 167 2 444 745 907 1208 9.80e-71 254
Msa0021550 AT4G30100.1 44.224 303 167 2 444 745 907 1208 9.80e-71 254
Msa0021550 AT1G65810.2 36.275 306 186 6 445 746 526 826 3.00e-48 185
Msa0021550 AT1G65810.1 36.275 306 186 6 445 746 526 826 3.25e-48 185
Msa0021550 AT1G65810.3 36.275 306 186 6 445 746 526 826 3.98e-48 185
Msa0021550 AT5G37030.1 31.750 400 232 12 362 746 250 623 1.15e-46 177
Msa0021550 AT5G47010.1 30.070 429 255 12 344 746 512 921 9.91e-46 178
Msa0021550 AT5G37165.1 34.286 315 195 9 440 746 79 389 8.57e-45 167
Msa0021550 AT4G05540.1 35.439 285 176 6 445 724 402 683 2.10e-42 165
Msa0021550 AT5G37150.1 32.907 313 200 9 441 747 495 803 1.67e-41 164
Msa0021550 AT5G52090.1 31.731 312 204 8 442 747 332 640 1.36e-40 159
Msa0021550 AT5G37140.1 33.013 312 196 10 441 747 353 656 2.02e-39 156
Msa0021550 AT5G35970.1 29.736 454 252 14 326 734 498 929 4.59e-38 153
Msa0021550 AT1G65780.1 34.688 320 194 8 438 748 530 843 3.45e-37 151
Msa0021550 AT2G03270.1 30.822 438 236 16 353 748 224 636 1.06e-30 129
Msa0021550 AT1G05460.2 27.316 421 242 15 344 734 423 809 2.19e-28 123
Msa0021550 AT1G05460.1 26.205 477 285 17 344 787 423 865 2.69e-28 122
Msa0021550 AT2G38770.1 23.762 404 252 16 440 815 1080 1455 5.38e-12 70.5

Find 200 sgRNAs with CRISPR-Local

Find 1195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTATCCGAGCTGCAATTT+TGG 0.127352 1_1:-38815204 Msa0021550:CDS
TGTATATCAAAGAAGGAAAA+TGG 0.214241 1_1:+38812436 None:intergenic
AATGCTGTTGGAGAGGATTT+TGG 0.237829 1_1:-38822841 Msa0021550:CDS
CCTTGATGAGATTGCGTTGC+GGG 0.253684 1_1:-38817669 Msa0021550:CDS
GACACATTACTATCATTAAT+TGG 0.257895 1_1:+38809901 None:intergenic
AGTCTAACTCGAAGAACTTT+TGG 0.280001 1_1:+38825978 None:intergenic
CGAGTTGAAGTTACAGCTTC+AGG 0.281533 1_1:+38817737 None:intergenic
GCCACGAATGATTTGTGATT+TGG 0.282072 1_1:+38827914 None:intergenic
GGGTTTAAGTTACCTGAAAA+TGG 0.287532 1_1:+38828559 None:intergenic
CAAGCTGATGACAACGATTA+TGG 0.301388 1_1:-38810087 Msa0021550:CDS
AACCCTTCCGGTGGCAGTTT+CGG 0.304417 1_1:-38828665 Msa0021550:five_prime_UTR
GTTATGGCCTCACGTTGATA+TGG 0.307471 1_1:+38822760 None:intergenic
CGTATTTATCCAAAGGTAAT+GGG 0.310679 1_1:+38822800 None:intergenic
ACTAATTCATTTCCAGTAGT+TGG 0.317580 1_1:+38817836 None:intergenic
ATTCTTGACGTTGACGAGTT+TGG 0.329524 1_1:+38827995 None:intergenic
TCACTTAAGAATGAGGGATA+TGG 0.329994 1_1:+38810228 None:intergenic
AAACCATCATCGCCATCTTT+TGG 0.332548 1_1:+38817863 None:intergenic
TTTAGCAATGTCCGAAATTA+CGG 0.337175 1_1:+38813949 None:intergenic
GCAAGTAAAGAAGGAGGTAT+AGG 0.337274 1_1:-38810981 Msa0021550:CDS
TTTGTCATAAATTCAATTGT+TGG 0.337719 1_1:+38809793 None:intergenic
AAAACTTACTTCTCCTCAAT+TGG 0.338467 1_1:+38819682 None:intergenic
GGCTTGTTGTGACTCTGTTC+AGG 0.345067 1_1:+38826263 None:intergenic
ACTTCCAGCAACCGTAATTT+CGG 0.348308 1_1:-38813960 Msa0021550:CDS
GGAAAAGAAACTAAGCCATT+TGG 0.360816 1_1:-38812409 Msa0021550:CDS
TATTAGGGGCCTCCGGGTAC+TGG 0.361153 1_1:-38820052 Msa0021550:intron
CTACAAGATTATTCTTGCTT+GGG 0.362323 1_1:-38828196 Msa0021550:CDS
TTTAATATTAAATCCTTGAA+TGG 0.362438 1_1:+38822862 None:intergenic
ACGTATTTATCCAAAGGTAA+TGG 0.373440 1_1:+38822799 None:intergenic
GGGGATGCTGACATGGGTTA+TGG 0.385427 1_1:-38810060 Msa0021550:CDS
CTAATTCATTTCCAGTAGTT+GGG 0.387171 1_1:+38817837 None:intergenic
GAAAAGAAACTAAGCCATTT+GGG 0.387483 1_1:-38812408 Msa0021550:CDS
GCCAAGGGAACAAGAGTTGC+TGG 0.388466 1_1:+38814433 None:intergenic
CAAGTAAAGAAGGAGGTATA+GGG 0.388484 1_1:-38810980 Msa0021550:CDS
GCAGGGGCTGAATGGAAGTT+AGG 0.388571 1_1:-38826311 Msa0021550:intron
ATGGAAAATCCCATTACCTT+TGG 0.389403 1_1:-38822809 Msa0021550:CDS
TTATGGAGGTGATGATGATT+AGG 0.389914 1_1:-38810043 Msa0021550:exon
TACTTTGACTGTACTCTCAT+TGG 0.390762 1_1:+38819980 None:intergenic
TCTACAAGATTATTCTTGCT+TGG 0.394427 1_1:-38828197 Msa0021550:CDS
GACTAAGGTAAATTGTAAAC+TGG 0.394628 1_1:-38809952 Msa0021550:three_prime_UTR
TACGCATGCATTTGCTTTGG+TGG 0.401294 1_1:-38826024 Msa0021550:CDS
TGGCATAGGTACCGCTGCTT+TGG 0.403022 1_1:-38812460 Msa0021550:CDS
GTCAGACTACCACAGCAAAA+TGG 0.403233 1_1:+38828631 None:intergenic
TCAGGCTTGTTGTCGCGATT+CGG 0.409727 1_1:+38826281 None:intergenic
TGTTGTAATGGCGTTGGATA+AGG 0.411327 1_1:-38828253 Msa0021550:exon
TATAACAATTCCTTGGAAGA+TGG 0.411888 1_1:-38812514 Msa0021550:CDS
TACTACGCATGCATTTGCTT+TGG 0.415462 1_1:-38826027 Msa0021550:CDS
ACCAGCAACTCTTGTTCCCT+TGG 0.421417 1_1:-38814434 Msa0021550:CDS
AGAAGGAGGTATAGGGTTTG+TGG 0.421995 1_1:-38810973 Msa0021550:CDS
GGGAAGACTCAGACCATACT+TGG 0.427450 1_1:-38820031 Msa0021550:CDS
ATGTCCGAAATTACGGTTGC+TGG 0.427872 1_1:+38813956 None:intergenic
TTGTGTTTCTGTAGGTGGTT+GGG 0.428362 1_1:-38810827 Msa0021550:intron
AGACGACACGAGACGGATAG+AGG 0.434745 1_1:+38828601 None:intergenic
TTCGTTATACTCTGTTGTAA+TGG 0.440835 1_1:-38828265 Msa0021550:exon
AGTACTCAGAATCCCAAGTA+TGG 0.447921 1_1:+38820018 None:intergenic
TCTAGAAAATGAAAGTCATC+TGG 0.447956 1_1:+38826242 None:intergenic
TTAATATTAAATCCTTGAAT+GGG 0.453919 1_1:+38822863 None:intergenic
GATTTAATATTAAATGCTGT+TGG 0.457174 1_1:-38822853 Msa0021550:CDS
ATAACAATTCCTTGGAAGAT+GGG 0.466888 1_1:-38812513 Msa0021550:CDS
GTTGTGTTTCTGTAGGTGGT+TGG 0.468114 1_1:-38810828 Msa0021550:intron
AAATACAGACAGAACGTGAT+TGG 0.471495 1_1:-38812480 Msa0021550:CDS
GGGTAACAGCCTTGATAGAA+TGG 0.471628 1_1:+38816721 None:intergenic
CTTCAAAACGTTGTTTGAAG+AGG 0.472157 1_1:+38812254 None:intergenic
TTGTGGAAAGTGCTGAGAAA+AGG 0.473365 1_1:-38810764 Msa0021550:CDS
TGGTGATTGCAGGGGCTGAA+TGG 0.481202 1_1:-38826319 Msa0021550:intron
AGCCATTTGGGAGTGGTTCG+TGG 0.481925 1_1:-38812396 Msa0021550:CDS
GTGGATATATGTACCATTGA+TGG 0.485147 1_1:-38812202 Msa0021550:CDS
TTTGGCATCAGACTATCCCT+TGG 0.486992 1_1:+38817881 None:intergenic
ACGGTTGCTGGAAGTTGAGC+TGG 0.489120 1_1:+38813968 None:intergenic
CAACTCATATTAGGGGCCTC+CGG 0.493142 1_1:-38820059 Msa0021550:intron
TCCCTCGTGTATATCAAAGA+AGG 0.493198 1_1:+38812429 None:intergenic
TTTACAATTTACCTTAGTCC+TGG 0.494278 1_1:+38809956 None:intergenic
TCAGCACTTTCTGTCTCCTC+AGG 0.494968 1_1:+38810165 None:intergenic
TGTGGAAAGTGCTGAGAAAA+GGG 0.495177 1_1:-38810763 Msa0021550:CDS
GAGTGGTTCGTGGGTAAATG+TGG 0.496919 1_1:-38812386 Msa0021550:CDS
CAGGGGCTGAATGGAAGTTA+GGG 0.498189 1_1:-38826310 Msa0021550:CDS
TGCCCGAAAATTGTGAGGGT+TGG 0.499605 1_1:-38816756 Msa0021550:CDS
TTCATAAAGAACACTTAAGT+AGG 0.501027 1_1:+38809832 None:intergenic
ACATTCGACGAATGAACGTT+GGG 0.502885 1_1:-38810947 Msa0021550:CDS
GTATATCAAAGAAGGAAAAT+GGG 0.504159 1_1:+38812437 None:intergenic
ATGTACCATTGATGGTTGCC+AGG 0.505319 1_1:-38812194 Msa0021550:intron
TTGGTTTCCTGACTTGAGTG+TGG 0.505908 1_1:+38812312 None:intergenic
CGTTATCCCACACTCAAGTC+AGG 0.506855 1_1:-38812319 Msa0021550:CDS
GTCTGAGTCTTCCCAGTACC+CGG 0.509954 1_1:+38820040 None:intergenic
AACTCATATTAGGGGCCTCC+GGG 0.510729 1_1:-38820058 Msa0021550:intron
TTCAAGAATGAGAGGCTCAT+AGG 0.510740 1_1:+38827941 None:intergenic
GATAAGAAGCTTTCCCTCGA+TGG 0.510778 1_1:-38812542 Msa0021550:CDS
GTTTACCTGGCAACCATCAA+TGG 0.511885 1_1:+38812189 None:intergenic
ATTAGGGGCCTCCGGGTACT+GGG 0.513464 1_1:-38820051 Msa0021550:intron
CGGCACACTCTAAACCCTTC+CGG 0.515979 1_1:-38828677 Msa0021550:five_prime_UTR
TGTGCCGGCGACTTAGCAAA+AGG 0.516626 1_1:+38828693 None:intergenic
TCATCAAGGGCAGAATTTGA+AGG 0.517544 1_1:+38817683 None:intergenic
ATACTCTGTTGTAATGGCGT+TGG 0.518305 1_1:-38828259 Msa0021550:exon
TCAACATACAAGTTCGTCTA+GGG 0.518452 1_1:+38816701 None:intergenic
ACCCACGAACCACTCCCAAA+TGG 0.518670 1_1:+38812394 None:intergenic
GATAAGCAATCTCCCATTCA+AGG 0.520613 1_1:-38822875 Msa0021550:CDS
CGTGTCAGCAGAGAAATTAG+TGG 0.521131 1_1:-38812221 Msa0021550:CDS
CCCGCAACGCAATCTCATCA+AGG 0.521246 1_1:+38817669 None:intergenic
CAAAGCACACCATTCTATCA+AGG 0.522470 1_1:-38816730 Msa0021550:CDS
TGGAGACGGGGATGCTGACA+TGG 0.522700 1_1:-38810067 Msa0021550:CDS
TTTGAAAGACTGAAGCAAGC+TGG 0.525419 1_1:-38813800 Msa0021550:CDS
TACCATTGCTCGTGAGTATG+TGG 0.525419 1_1:-38822908 Msa0021550:CDS
TGTGTCAGAGCAAGTAAAGA+AGG 0.527547 1_1:-38810990 Msa0021550:CDS
CGATCTCATATAAGCGTGGA+AGG 0.527916 1_1:-38825912 Msa0021550:CDS
TCGAGTTAGACTCTATCTAC+CGG 0.530219 1_1:-38825967 Msa0021550:CDS
AAGCAGAATAATGCTTCTGC+AGG 0.530730 1_1:-38815239 Msa0021550:CDS
AGAATAAGAGAAGAAACAAT+GGG 0.531123 1_1:-38828031 Msa0021550:CDS
GCCAAATCACAAATCATTCG+TGG 0.533111 1_1:-38827915 Msa0021550:CDS
CAGAGCAAAGTCTGCAGTGT+TGG 0.535018 1_1:-38810919 Msa0021550:intron
GAAACTAAGCCATTTGGGAG+TGG 0.535054 1_1:-38812403 Msa0021550:CDS
ATGACAACGATTATGGAGAC+GGG 0.535741 1_1:-38810080 Msa0021550:CDS
GACGCCCTCCCCATCTTCCA+AGG 0.536450 1_1:+38812504 None:intergenic
GCACTTTCTGTCTCCTCAGG+TGG 0.537816 1_1:+38810168 None:intergenic
AATATTAAATGCTGTTGGAG+AGG 0.537878 1_1:-38822848 Msa0021550:CDS
AATTCTGATTTCAAATGAAG+AGG 0.540245 1_1:-38826171 Msa0021550:intron
ATGCCAAAAGATGGCGATGA+TGG 0.542283 1_1:-38817866 Msa0021550:CDS
TTGGCTTCTTCAAGAATGAG+AGG 0.548551 1_1:+38827933 None:intergenic
CTTACCAGTAGATGATATGT+TGG 0.549866 1_1:+38815259 None:intergenic
CGGGAGATAATGTGAAATCA+AGG 0.550772 1_1:-38825947 Msa0021550:CDS
CATCAAGGGCAGAATTTGAA+GGG 0.551014 1_1:+38817684 None:intergenic
CAACACTGCAGACTTTGCTC+TGG 0.551458 1_1:+38810920 None:intergenic
TTAGCATCTCCATGGTTACA+TGG 0.551718 1_1:-38817911 Msa0021550:CDS
GATAGTCTGATGCCAAAAGA+TGG 0.556168 1_1:-38817875 Msa0021550:CDS
TAACAATTCCTTGGAAGATG+GGG 0.556955 1_1:-38812512 Msa0021550:CDS
CTTGATTTCACATTATCTCC+CGG 0.557039 1_1:+38825948 None:intergenic
GGTTACATGGCATCAATCCA+AGG 0.557352 1_1:-38817898 Msa0021550:CDS
CGGGACCTTCGAGCTAAAGC+AGG 0.558038 1_1:-38819716 Msa0021550:CDS
AGTGCCAACATATCATCTAC+TGG 0.559414 1_1:-38815263 Msa0021550:CDS
GACATTCGACGAATGAACGT+TGG 0.561066 1_1:-38810948 Msa0021550:CDS
AGGTTGACTTGTCCACTGTA+GGG 0.562505 1_1:+38812274 None:intergenic
GCCATTTGGGAGTGGTTCGT+GGG 0.565810 1_1:-38812395 Msa0021550:CDS
CAGAATAAGAGAAGAAACAA+TGG 0.570369 1_1:-38828032 Msa0021550:CDS
CCTTGAAATACATACAATTG+TGG 0.570703 1_1:+38815175 None:intergenic
GGTGCCACAGTTACCAATTG+AGG 0.570850 1_1:-38819695 Msa0021550:CDS
ATTCGTGGCGATAAAGATGA+AGG 0.573233 1_1:-38827900 Msa0021550:intron
TAAAGAACACTTAAGTAGGA+AGG 0.574222 1_1:+38809836 None:intergenic
AGTAAACAATGATGCGCGAA+TGG 0.575591 1_1:-38810139 Msa0021550:CDS
ATGGAGTGTGCGCGGTGTGA+AGG 0.576859 1_1:+38828578 None:intergenic
TGGCACCTGCTTTAGCTCGA+AGG 0.577708 1_1:+38819711 None:intergenic
GACGACACGAGACGGATAGA+GGG 0.579726 1_1:+38828602 None:intergenic
CGGAAGGGTTTAGAGTGTGC+CGG 0.579826 1_1:+38828678 None:intergenic
CAATTCCTTGGAAGATGGGG+AGG 0.580496 1_1:-38812509 Msa0021550:CDS
TTCTCCTCAATTGGTAACTG+TGG 0.582302 1_1:+38819691 None:intergenic
TGGTTTCCTGACTTGAGTGT+GGG 0.582456 1_1:+38812313 None:intergenic
AGACAGAACGTGATTGGCAT+AGG 0.583872 1_1:-38812474 Msa0021550:CDS
CGAGTTAGACTCTATCTACC+GGG 0.585187 1_1:-38825966 Msa0021550:CDS
GTGCCGGCGACTTAGCAAAA+GGG 0.588662 1_1:+38828694 None:intergenic
AACCGAAACTGCCACCGGAA+GGG 0.589884 1_1:+38828663 None:intergenic
CCCTTGATGAGATTGCGTTG+CGG 0.590434 1_1:-38817670 Msa0021550:CDS
TTTCACTCTTACAGCTTGTG+CGG 0.591093 1_1:+38815000 None:intergenic
TCATTAACGTATTTATCCAA+AGG 0.591924 1_1:+38822793 None:intergenic
TTGGGTCTGCCTCAACATTG+AGG 0.592122 1_1:-38810809 Msa0021550:CDS
ATTGGAGATTAGCATCTCCA+TGG 0.592971 1_1:-38817919 Msa0021550:CDS
CTTATTGCCCGAAAATTGTG+AGG 0.593352 1_1:-38816761 Msa0021550:CDS
GATGACAACGATTATGGAGA+CGG 0.593565 1_1:-38810081 Msa0021550:CDS
CATTGAGGAGGAACGTACAA+TGG 0.594093 1_1:-38810794 Msa0021550:CDS
ATCAACATACAAGTTCGTCT+AGG 0.594679 1_1:+38816700 None:intergenic
CTTGTAGAAACGATGAATTG+TGG 0.595441 1_1:+38828212 None:intergenic
TGGTTCGTGGGTAAATGTGG+AGG 0.598793 1_1:-38812383 Msa0021550:CDS
AGGAAAATGGGCCAAAGCAG+CGG 0.598942 1_1:+38812449 None:intergenic
ATTTGTATAGATGAGCAGAA+AGG 0.600858 1_1:-38809997 Msa0021550:three_prime_UTR
AGGGTGTTATAATTGCAACT+TGG 0.604636 1_1:+38812293 None:intergenic
TAACCGAAACTGCCACCGGA+AGG 0.608266 1_1:+38828662 None:intergenic
AGCCACATACTCACGAGCAA+TGG 0.612987 1_1:+38822906 None:intergenic
GATGCTGACATGGGTTATGG+AGG 0.614808 1_1:-38810057 Msa0021550:CDS
CCGCAACGCAATCTCATCAA+GGG 0.617896 1_1:+38817670 None:intergenic
TACGTTCCTCCTCAATGTTG+AGG 0.620686 1_1:+38810800 None:intergenic
TCCTTCTTTGATATACACGA+GGG 0.626412 1_1:-38812430 Msa0021550:CDS
GAGGTTGACTTGTCCACTGT+AGG 0.627968 1_1:+38812273 None:intergenic
GACTTAACCGAAACTGCCAC+CGG 0.628065 1_1:+38828658 None:intergenic
CATTTGAAGCACTAAAGCTG+AGG 0.630181 1_1:+38815071 None:intergenic
TTGTTATAAAACTCCATCGA+GGG 0.630228 1_1:+38812529 None:intergenic
CGTACAATGGAACAAGCTTG+TGG 0.630942 1_1:-38810781 Msa0021550:CDS
CCTCATCCAAAATTGCAGCT+CGG 0.631412 1_1:+38815198 None:intergenic
TTCCTTCTTTGATATACACG+AGG 0.631750 1_1:-38812431 Msa0021550:CDS
GGAAGACTCAGACCATACTT+GGG 0.638948 1_1:-38820030 Msa0021550:CDS
TTATTGCCCGAAAATTGTGA+GGG 0.639374 1_1:-38816760 Msa0021550:CDS
AATTCCTTGGAAGATGGGGA+GGG 0.640231 1_1:-38812508 Msa0021550:CDS
ATTTGAAGCACTAAAGCTGA+GGG 0.645414 1_1:+38815072 None:intergenic
AGGGGCTGAATGGAAGTTAG+GGG 0.646588 1_1:-38826309 Msa0021550:CDS
GTTACATGGCATCAATCCAA+GGG 0.646769 1_1:-38817897 Msa0021550:CDS
GTCAGAGCAAGTAAAGAAGG+AGG 0.652708 1_1:-38810987 Msa0021550:CDS
TTACGTTACTCTAGAAGCCG+AGG 0.656203 1_1:-38828172 Msa0021550:intron
ACAAACCTGTATCAGAACAA+AGG 0.657049 1_1:+38820696 None:intergenic
AATGCGATCTCATATAAGCG+TGG 0.659078 1_1:-38825916 Msa0021550:CDS
ATCAAGGGCAGAATTTGAAG+GGG 0.661980 1_1:+38817685 None:intergenic
GGAGACGGGGATGCTGACAT+GGG 0.669073 1_1:-38810066 Msa0021550:CDS
TGAAGCACTAAAGCTGAGGG+TGG 0.669609 1_1:+38815075 None:intergenic
GTGAAGGAGACGACACGAGA+CGG 0.669761 1_1:+38828594 None:intergenic
TTTCAATCCATATCAACGTG+AGG 0.678135 1_1:-38822767 Msa0021550:CDS
GGCTGAATGGAAGTTAGGGG+CGG 0.682780 1_1:-38826306 Msa0021550:CDS
CACACTCTAAACCCTTCCGG+TGG 0.682866 1_1:-38828674 Msa0021550:five_prime_UTR
GGATTGATGCCATGTAACCA+TGG 0.688224 1_1:+38817902 None:intergenic
GGTCTGCCTCAACATTGAGG+AGG 0.690370 1_1:-38810806 Msa0021550:CDS
ACCTGAAAATGGAGTGTGCG+CGG 0.695325 1_1:+38828570 None:intergenic
TGAGTCTTCCCAGTACCCGG+AGG 0.696404 1_1:+38820043 None:intergenic
GATCTCATATAAGCGTGGAA+GGG 0.703735 1_1:-38825911 Msa0021550:CDS
GCAATTATAACACCCTACAG+TGG 0.704540 1_1:-38812286 Msa0021550:CDS
ATTGTTATAAAACTCCATCG+AGG 0.705551 1_1:+38812528 None:intergenic
TGACAACGATTATGGAGACG+GGG 0.712984 1_1:-38810079 Msa0021550:CDS
ACAATATCGAATGCATCCTG+AGG 0.724850 1_1:-38813753 Msa0021550:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAAAATAGAAAAAAAA+TGG + chr1_1:38809962-38809981 None:intergenic 10.0%
!!! TTCCAATAAAATATAATTTT+GGG + chr1_1:38811334-38811353 None:intergenic 10.0%
!!! TTTCCAATAAAATATAATTT+TGG + chr1_1:38811335-38811354 None:intergenic 10.0%
!! TTAATAGAAATAAAATTTGT+GGG + chr1_1:38812758-38812777 None:intergenic 10.0%
!! TTTAATAGAAATAAAATTTG+TGG + chr1_1:38812759-38812778 None:intergenic 10.0%
!!! ATAAAGATATTGATAATTTT+AGG - chr1_1:38812844-38812863 Msa0021550:intron 10.0%
!!! TAAAGATATTGATAATTTTA+GGG - chr1_1:38812845-38812864 Msa0021550:intron 10.0%
!!! TGTTCTTTTTTTTTTTTTTT+GGG + chr1_1:38813581-38813600 None:intergenic 10.0%
!! TTAAAAAGCTAAAAAAAATT+TGG - chr1_1:38816435-38816454 Msa0021550:intron 10.0%
!! AAATATACTAGAAAAATTAT+AGG + chr1_1:38816899-38816918 None:intergenic 10.0%
!! AAAATACAAAATAAAAACAA+AGG + chr1_1:38817033-38817052 None:intergenic 10.0%
!! AAAAAAAACTAATACAAATT+AGG - chr1_1:38822346-38822365 Msa0021550:intron 10.0%
!! AAAAAAACTAATACAAATTA+GGG - chr1_1:38822347-38822366 Msa0021550:intron 10.0%
!!! TTTTTTATTTTTTTTTGTGA+AGG - chr1_1:38823670-38823689 Msa0021550:intron 10.0%
!!! TTTTTATTTTTTTTTGTGAA+GGG - chr1_1:38823671-38823690 Msa0021550:intron 10.0%
!! TTAATTCATAATAATTGTTA+AGG + chr1_1:38823733-38823752 None:intergenic 10.0%
!! TAAATGTTAAAATTATCTAA+AGG + chr1_1:38823911-38823930 None:intergenic 10.0%
!!! TAGATAATTTTAACATTTAA+TGG - chr1_1:38823912-38823931 Msa0021550:intron 10.0%
!!! AATTTTGATGTATTTTTATT+TGG - chr1_1:38824891-38824910 Msa0021550:intron 10.0%
!!! TATTTTTTTTTTTTTAAGTC+TGG - chr1_1:38825341-38825360 Msa0021550:intron 10.0%
!!! CTCATTTTTAATAGAAAATT+CGG - chr1_1:38810037-38810056 Msa0021550:exon 15.0%
!!! TCATTTTCACAAATTATTAT+TGG + chr1_1:38810680-38810699 None:intergenic 15.0%
!!! TAATTTTAGTTTATATGTGT+CGG - chr1_1:38810712-38810731 Msa0021550:intron 15.0%
!! TTTGTTAATATTCTTTGTAT+TGG - chr1_1:38811969-38811988 Msa0021550:intron 15.0%
!!! TGTTTGTTAAAGTTAAAAAA+TGG - chr1_1:38812052-38812071 Msa0021550:intron 15.0%
!!! GTTTGTTAAAGTTAAAAAAT+GGG - chr1_1:38812053-38812072 Msa0021550:intron 15.0%
!!! TTTTTTTTTTTTTTGGGTTT+TGG + chr1_1:38813575-38813594 None:intergenic 15.0%
!!! CTGTTCTTTTTTTTTTTTTT+TGG + chr1_1:38813582-38813601 None:intergenic 15.0%
!! AATTTATGAAAGCTATAAAA+CGG - chr1_1:38813629-38813648 Msa0021550:intron 15.0%
!! AAAAAAAAGTGAAAATATCT+TGG + chr1_1:38814487-38814506 None:intergenic 15.0%
!!! TAATTTGAATCTTTCATTTT+GGG + chr1_1:38814967-38814986 None:intergenic 15.0%
!!! ATAATTTGAATCTTTCATTT+TGG + chr1_1:38814968-38814987 None:intergenic 15.0%
!!! TTGTGTGTTATTTTATATTT+AGG - chr1_1:38815446-38815465 Msa0021550:intron 15.0%
!!! TGTGTGTTATTTTATATTTA+GGG - chr1_1:38815447-38815466 Msa0021550:intron 15.0%
!! TTAATATTAAATCCTTGAAT+GGG + chr1_1:38815631-38815650 None:intergenic 15.0%
!! TTTAATATTAAATCCTTGAA+TGG + chr1_1:38815632-38815651 None:intergenic 15.0%
!! NNNNNNATAAAGCTAAAAAC+AGG + chr1_1:38815809-38815828 None:intergenic 15.0%
!!! AAAAATTATAGGAATTTTCT+TGG + chr1_1:38816888-38816907 None:intergenic 15.0%
!!! TTTTAAGGTTTAAAGAAAAA+GGG - chr1_1:38818023-38818042 Msa0021550:intron 15.0%
!! TGTATTATAAGAAATACTAA+AGG + chr1_1:38818200-38818219 None:intergenic 15.0%
!!! CAATTATTAGTTTTTTGAAA+AGG + chr1_1:38818404-38818423 None:intergenic 15.0%
!!! TTTTATTTACTTTTTAGGAA+CGG - chr1_1:38818755-38818774 Msa0021550:intron 15.0%
!!! ATTTTAAAAATGTCTCAATA+TGG + chr1_1:38818940-38818959 None:intergenic 15.0%
!! CTTATATTTACAATAAATAC+TGG + chr1_1:38819127-38819146 None:intergenic 15.0%
!! CATATAAGTTTGAAAATTAT+AGG + chr1_1:38820017-38820036 None:intergenic 15.0%
!!! TTTGTATTAGTTTTTTTTCA+TGG + chr1_1:38822344-38822363 None:intergenic 15.0%
!!! AAAGATTAAATTTGTTTTCT+GGG + chr1_1:38822398-38822417 None:intergenic 15.0%
!!! TAAAGATTAAATTTGTTTTC+TGG + chr1_1:38822399-38822418 None:intergenic 15.0%
!! AATTTATATTCTTGAAGAAA+AGG + chr1_1:38822901-38822920 None:intergenic 15.0%
!!! AAAAACTTTTTTGCATTTAT+TGG + chr1_1:38824083-38824102 None:intergenic 15.0%
!! GAAAAAAAAATCAAAATTCT+TGG - chr1_1:38824337-38824356 Msa0021550:intron 15.0%
!! CCTAATTTATTTATAATCAA+AGG + chr1_1:38825250-38825269 None:intergenic 15.0%
!! CCTTTGATTATAAATAAATT+AGG - chr1_1:38825247-38825266 Msa0021550:intron 15.0%
!! AAAAAAAAAAATAATAGCGA+GGG + chr1_1:38825334-38825353 None:intergenic 15.0%
!! AAAAAAAAAAAATAATAGCG+AGG + chr1_1:38825335-38825354 None:intergenic 15.0%
!!! GTAAAATTGAATTATTGTTT+TGG - chr1_1:38825493-38825512 Msa0021550:intron 15.0%
!!! CCTTATTTACATTATTATAT+AGG + chr1_1:38827149-38827168 None:intergenic 15.0%
!! CCTATATAATAATGTAAATA+AGG - chr1_1:38827146-38827165 Msa0021550:intron 15.0%
!!! AGTTTTATAAATTCAATCTT+GGG + chr1_1:38827269-38827288 None:intergenic 15.0%
!!! AAGTTTTATAAATTCAATCT+TGG + chr1_1:38827270-38827289 None:intergenic 15.0%
!! ATTTATAAAACTTAGAAAGT+TGG - chr1_1:38827277-38827296 Msa0021550:intron 15.0%
!!! TTTTTTAATAAGCTTTCATT+TGG - chr1_1:38827892-38827911 Msa0021550:intron 15.0%
!! AATAGAAAAAAAATGGTGAT+GGG + chr1_1:38809955-38809974 None:intergenic 20.0%
!! AAATAGAAAAAAAATGGTGA+TGG + chr1_1:38809956-38809975 None:intergenic 20.0%
!!! TTTGGTTCAATGATTATTAT+TGG - chr1_1:38810155-38810174 Msa0021550:CDS 20.0%
!! CATATCTTATTAAGAAAAGT+TGG - chr1_1:38810189-38810208 Msa0021550:CDS 20.0%
!! TGAACAAAAGATATGAATAT+GGG + chr1_1:38810401-38810420 None:intergenic 20.0%
!! ACAAATTATTATTGGTGTAA+GGG + chr1_1:38810672-38810691 None:intergenic 20.0%
!! AACTATTAAGAAATATTCAG+AGG + chr1_1:38811016-38811035 None:intergenic 20.0%
!! TTGTTAAATATCCAGTATAT+CGG - chr1_1:38811150-38811169 Msa0021550:intron 20.0%
!!! AGCCCAAAATTATATTTTAT+TGG - chr1_1:38811329-38811348 Msa0021550:intron 20.0%
!!! TATATTTTATTGGAAACTGA+TGG - chr1_1:38811339-38811358 Msa0021550:intron 20.0%
!!! TATTTGTCATATCGAATTTT+TGG - chr1_1:38811823-38811842 Msa0021550:intron 20.0%
!! TGAAATTTGAAAAATGTAGT+CGG - chr1_1:38812105-38812124 Msa0021550:intron 20.0%
!!! AATGCTGTTTTTTGTTTTAT+AGG - chr1_1:38812912-38812931 Msa0021550:intron 20.0%
!!! GTTTAGTTTATAACTTATTG+TGG + chr1_1:38813040-38813059 None:intergenic 20.0%
!! AATCTACTCAAATAAGATTT+CGG + chr1_1:38813303-38813322 None:intergenic 20.0%
!!! GCTAGATTTGTTAAATAAAA+AGG + chr1_1:38813380-38813399 None:intergenic 20.0%
!! AATTCGTCAAAAAAATACAT+TGG + chr1_1:38813421-38813440 None:intergenic 20.0%
!!! AATGTATTTTTTTGACGAAT+TGG - chr1_1:38813420-38813439 Msa0021550:intron 20.0%
!!! ATGTATTTTTTTGACGAATT+GGG - chr1_1:38813421-38813440 Msa0021550:intron 20.0%
!!! TCATAAATTTTCATTTGTCT+GGG + chr1_1:38813618-38813637 None:intergenic 20.0%
!!! TTCATAAATTTTCATTTGTC+TGG + chr1_1:38813619-38813638 None:intergenic 20.0%
!!! TTCAATGTTTTCACATTTAT+AGG + chr1_1:38813775-38813794 None:intergenic 20.0%
!!! ACTTTTTTTTTTGTATAGCT+TGG - chr1_1:38814497-38814516 Msa0021550:intron 20.0%
!!! TTGTTGTTGTTATTAGATTA+TGG - chr1_1:38814520-38814539 Msa0021550:intron 20.0%
!!! AATTTGAATCTTTCATTTTG+GGG + chr1_1:38814966-38814985 None:intergenic 20.0%
!!! ATTACTTTGCATTTTTTAGT+AGG - chr1_1:38815091-38815110 Msa0021550:intron 20.0%
!! ACTTCAAGAATATATAATTC+TGG + chr1_1:38815322-38815341 None:intergenic 20.0%
!! AATATAAAATAACACACAAG+TGG + chr1_1:38815445-38815464 None:intergenic 20.0%
!! ATAACACAAATTATTACTCA+AGG + chr1_1:38815482-38815501 None:intergenic 20.0%
!!! ATTTGTGTTATTAGTTTGTA+AGG - chr1_1:38815491-38815510 Msa0021550:intron 20.0%
!! ATATTTATAAGAATCTTCAC+TGG + chr1_1:38815545-38815564 None:intergenic 20.0%
!! GATTTAATATTAAATGCTGT+TGG - chr1_1:38815638-38815657 Msa0021550:intron 20.0%
!!! TAGTTTTTCAAGAAAATCAA+CGG + chr1_1:38816381-38816400 None:intergenic 20.0%
!! AAGCTAAAAAAAATTTGGAT+CGG - chr1_1:38816440-38816459 Msa0021550:intron 20.0%
!!! GAATTTTTCAAAGAGATTTT+AGG + chr1_1:38816866-38816885 None:intergenic 20.0%
!! GTTAGTAACTTTATATTGTT+TGG - chr1_1:38817086-38817105 Msa0021550:intron 20.0%
!! TCAATATAAGAGTGAATATA+TGG + chr1_1:38817522-38817541 None:intergenic 20.0%
!! TCAATATAAGAGTGAATATA+TGG + chr1_1:38817522-38817541 None:intergenic 20.0%
!! AGGAAAATAAAAAAATTCTC+TGG + chr1_1:38817749-38817768 None:intergenic 20.0%
!! ACGTATTACATAAAACAAAA+GGG + chr1_1:38817870-38817889 None:intergenic 20.0%
!! AACGTATTACATAAAACAAA+AGG + chr1_1:38817871-38817890 None:intergenic 20.0%
!!! GTTTTAAGGTTTAAAGAAAA+AGG - chr1_1:38818022-38818041 Msa0021550:intron 20.0%
!! AGAAAATTTGAACTAATTTC+AGG + chr1_1:38818045-38818064 None:intergenic 20.0%
!! TTATATAGCTAACATACTTA+AGG + chr1_1:38818690-38818709 None:intergenic 20.0%
!!! ATATATAACAGAGAAGTATA+AGG + chr1_1:38818726-38818745 None:intergenic 20.0%
!!! TTTATTTACTTTTTAGGAAC+GGG - chr1_1:38818756-38818775 Msa0021550:intron 20.0%
!!! GTTTTCATGAGTAAATTAAA+GGG + chr1_1:38818851-38818870 None:intergenic 20.0%
!!! AGTTTTCATGAGTAAATTAA+AGG + chr1_1:38818852-38818871 None:intergenic 20.0%
!!! ACTTTTATTCCAATACAAAT+AGG - chr1_1:38819657-38819676 Msa0021550:intron 20.0%
!! AATCAAAAGAGAACTAAAAA+TGG - chr1_1:38820425-38820444 Msa0021550:intron 20.0%
!! AAAACAATGTCTAATAATCA+TGG - chr1_1:38820718-38820737 Msa0021550:CDS 20.0%
!! AAACAATGTCTAATAATCAT+GGG - chr1_1:38820719-38820738 Msa0021550:intron 20.0%
!! ATATAAAAAGACAACAAGAA+AGG + chr1_1:38820877-38820896 None:intergenic 20.0%
!! TTGTTTAAATGCCTTTATTA+AGG - chr1_1:38820951-38820970 Msa0021550:intron 20.0%
!! TGTTTAAATGCCTTTATTAA+GGG - chr1_1:38820952-38820971 Msa0021550:intron 20.0%
!! TTCATATTATGATTGAATAG+AGG + chr1_1:38821101-38821120 None:intergenic 20.0%
!! ATACAGCATAATTAATTACA+AGG + chr1_1:38821566-38821585 None:intergenic 20.0%
!! TATTATTTATAAGCTTGTGA+AGG - chr1_1:38822051-38822070 Msa0021550:intron 20.0%
!! AAAAAATAAGCCAATTCAAA+CGG - chr1_1:38822181-38822200 Msa0021550:intron 20.0%
!!! TGAGTTGAATAAAAATTGAA+GGG + chr1_1:38822300-38822319 None:intergenic 20.0%
!!! TTGAGTTGAATAAAAATTGA+AGG + chr1_1:38822301-38822320 None:intergenic 20.0%
!!! ATTTTTCTCATGTTAAATCA+AGG - chr1_1:38822544-38822563 Msa0021550:intron 20.0%
!! AAGTAGTTTGAATATTGAAT+TGG - chr1_1:38822965-38822984 Msa0021550:intron 20.0%
!! AATATGTCAATGTCAATATA+TGG + chr1_1:38823117-38823136 None:intergenic 20.0%
!!! TATTTTCTCATTATCTTCTT+TGG - chr1_1:38823377-38823396 Msa0021550:intron 20.0%
!!! GATTGTTTTCAATATAAACT+TGG - chr1_1:38823547-38823566 Msa0021550:intron 20.0%
!! TTCATAATAATTGTTAAGGT+GGG + chr1_1:38823729-38823748 None:intergenic 20.0%
!! ATTCATAATAATTGTTAAGG+TGG + chr1_1:38823730-38823749 None:intergenic 20.0%
!! AATAAGTTAACAAAATAGTC+AGG + chr1_1:38823945-38823964 None:intergenic 20.0%
!! ATGAAGTAAATCAATAACAT+AGG + chr1_1:38824002-38824021 None:intergenic 20.0%
!!! TAAATGCAAAAAAGTTTTTC+TGG - chr1_1:38824084-38824103 Msa0021550:intron 20.0%
!!! CAATAATATTTTCTTTTGGT+AGG + chr1_1:38824383-38824402 None:intergenic 20.0%
!!! TGCACAATAATATTTTCTTT+TGG + chr1_1:38824387-38824406 None:intergenic 20.0%
!!! TAAACACTTTGAAAATCATT+TGG - chr1_1:38824444-38824463 Msa0021550:intron 20.0%
!!! AAACACTTTGAAAATCATTT+GGG - chr1_1:38824445-38824464 Msa0021550:intron 20.0%
!! TCATAAAATACACAAAAATC+AGG + chr1_1:38824641-38824660 None:intergenic 20.0%
!!! TGATTTTTGAACTTAAGATA+TGG - chr1_1:38824658-38824677 Msa0021550:intron 20.0%
!!! CATATTGAACAAAACAATTT+TGG + chr1_1:38824790-38824809 None:intergenic 20.0%
!! GTGATTAAATGAATATCAAA+AGG - chr1_1:38824822-38824841 Msa0021550:intron 20.0%
!! ATTATAAATAAATTAGGCTG+AGG - chr1_1:38825253-38825272 Msa0021550:intron 20.0%
!! TTATAAATAAATTAGGCTGA+GGG - chr1_1:38825254-38825273 Msa0021550:intron 20.0%
!!! AAATTGAATTATTGTTTTGG+AGG - chr1_1:38825496-38825515 Msa0021550:intron 20.0%
!!! CTAGCTTTATGATAATTATA+TGG - chr1_1:38826324-38826343 Msa0021550:intron 20.0%
!! AAAAGCAAATATGAAAAAGA+AGG + chr1_1:38826353-38826372 None:intergenic 20.0%
!!! TTCTTTTTCATATTTGCTTT+TGG - chr1_1:38826352-38826371 Msa0021550:intron 20.0%
!!! GGTTCTAAATTTTAATCATT+TGG - chr1_1:38826632-38826651 Msa0021550:intron 20.0%
!! TAAAAAATGCTTCAAATGAA+TGG + chr1_1:38827210-38827229 None:intergenic 20.0%
!!! AAATTTTAATTGAGACTATC+TGG - chr1_1:38827828-38827847 Msa0021550:intron 20.0%
!!! ATGTTTAGATATCAAGTTTT+AGG - chr1_1:38827916-38827935 Msa0021550:CDS 20.0%
!! ATATAAAACTGAGTTTGATA+TGG - chr1_1:38828059-38828078 Msa0021550:intron 20.0%
!! AGATTAAAATTTATTGGTAG+AGG + chr1_1:38828159-38828178 None:intergenic 20.0%
!! TGGATCTTCAAAAAAAAAAT+TGG + chr1_1:38828573-38828592 None:intergenic 20.0%
!! TTTGTCATAAATTCAATTGT+TGG + chr1_1:38828701-38828720 None:intergenic 20.0%
! AGAAACAACGAAAGTAAAAT+AGG + chr1_1:38810019-38810038 None:intergenic 25.0%
! ATCATTGAACCAAAACAATT+TGG + chr1_1:38810149-38810168 None:intergenic 25.0%
! AAAAGATATGAATATGGGAA+TGG + chr1_1:38810396-38810415 None:intergenic 25.0%
! GTGAACAAAAGATATGAATA+TGG + chr1_1:38810402-38810421 None:intergenic 25.0%
! AGAATAAGAGAAGAAACAAT+GGG - chr1_1:38810460-38810479 Msa0021550:intron 25.0%
! CACAAATTATTATTGGTGTA+AGG + chr1_1:38810673-38810692 None:intergenic 25.0%
! ACACAATACATATCCTATAT+CGG - chr1_1:38810746-38810765 Msa0021550:intron 25.0%
! TTATGCAAGCTAATACATAA+GGG + chr1_1:38810809-38810828 None:intergenic 25.0%
! TTGTAGCAAAAGATAAACTA+AGG - chr1_1:38810836-38810855 Msa0021550:intron 25.0%
! TAAGGTTTATGATATAACTC+TGG + chr1_1:38810974-38810993 None:intergenic 25.0%
!!! TAGTTTTTTACAAGCTATGT+TGG - chr1_1:38811043-38811062 Msa0021550:intron 25.0%
! AATGAGGATAATGATTATGT+TGG - chr1_1:38811484-38811503 Msa0021550:intron 25.0%
! ATGAGGATAATGATTATGTT+GGG - chr1_1:38811485-38811504 Msa0021550:intron 25.0%
!! CTACCAATTATTAGTTGTTT+TGG - chr1_1:38811554-38811573 Msa0021550:intron 25.0%
! ACACCAAAACAACTAATAAT+TGG + chr1_1:38811560-38811579 None:intergenic 25.0%
! AAATTCGATATGACAAATAG+CGG + chr1_1:38811822-38811841 None:intergenic 25.0%
!!! TTTTTTATATTGGTGATTGC+AGG - chr1_1:38812162-38812181 Msa0021550:intron 25.0%
!!! TTTTTATATTGGTGATTGCA+GGG - chr1_1:38812163-38812182 Msa0021550:intron 25.0%
!!! TCTAGAGTTTCTTTTTGATA+TGG - chr1_1:38812266-38812285 Msa0021550:CDS 25.0%
!! TTTCTTTTTGATATGGAAGA+GGG - chr1_1:38812273-38812292 Msa0021550:CDS 25.0%
! AATTCTGATTTCAAATGAAG+AGG - chr1_1:38812320-38812339 Msa0021550:CDS 25.0%
!! GAATCAATTGCATTTTATGA+GGG - chr1_1:38812602-38812621 Msa0021550:intron 25.0%
!! CTTTTATATACAAAGATGCT+CGG - chr1_1:38812992-38813011 Msa0021550:intron 25.0%
! ATCTACTCAAATAAGATTTC+GGG + chr1_1:38813302-38813321 None:intergenic 25.0%
! AAAAAAAAAGAACAGAGACT+TGG - chr1_1:38813587-38813606 Msa0021550:intron 25.0%
!!! TATCCTTGCTTTTATTAGTT+CGG + chr1_1:38813681-38813700 None:intergenic 25.0%
!! TTAGTTCTCGATGTTATTAT+TGG + chr1_1:38813712-38813731 None:intergenic 25.0%
!! TGTTTTCACATTTATAGGAA+AGG + chr1_1:38813770-38813789 None:intergenic 25.0%
!!! GTTATTTTTCGTGATCATAA+TGG + chr1_1:38813900-38813919 None:intergenic 25.0%
! TACATTACCAAATAAACTAG+AGG - chr1_1:38814192-38814211 Msa0021550:intron 25.0%
!! TCAATATCCTCTAGTTTATT+TGG + chr1_1:38814202-38814221 None:intergenic 25.0%
! TGCTTATCTCGAAATAAATT+TGG + chr1_1:38814565-38814584 None:intergenic 25.0%
! TCAGTGTACTTAAAAGAAAA+GGG + chr1_1:38814663-38814682 None:intergenic 25.0%
! TTCAGTGTACTTAAAAGAAA+AGG + chr1_1:38814664-38814683 None:intergenic 25.0%
!!! TTTCTTTTAAGTACACTGAA+TGG - chr1_1:38814664-38814683 Msa0021550:intron 25.0%
! GAAAGATTCAAATTATGTTG+TGG - chr1_1:38814972-38814991 Msa0021550:intron 25.0%
! TCATTAACGTATTTATCCAA+AGG + chr1_1:38815701-38815720 None:intergenic 25.0%
! AGAGTAAAAACTTACTGTTA+TGG + chr1_1:38815750-38815769 None:intergenic 25.0%
! NNATAAAGCTAAAAACAGGT+TGG + chr1_1:38815805-38815824 None:intergenic 25.0%
!!! TGTTGATTTGATGATTTTTG+TGG + chr1_1:38816014-38816033 None:intergenic 25.0%
! TACCGAAAATTGCTATATAT+GGG + chr1_1:38816065-38816084 None:intergenic 25.0%
! AGAAAAAGTGACAAAAAAGA+TGG + chr1_1:38816318-38816337 None:intergenic 25.0%
! ATTCATGATTAGAACGAAAA+AGG - chr1_1:38816408-38816427 Msa0021550:intron 25.0%
! AGCTAAAAAAAATTTGGATC+GGG - chr1_1:38816441-38816460 Msa0021550:intron 25.0%
!!! TACAAATTTTTAGTGAGAGA+AGG + chr1_1:38816569-38816588 None:intergenic 25.0%
! GAATTATGAAGGAAATAAAC+CGG - chr1_1:38816606-38816625 Msa0021550:intron 25.0%
! TAAAGTTACTAACAATGACA+CGG + chr1_1:38817079-38817098 None:intergenic 25.0%
! ATATAAGAGTGAATATATGG+AGG + chr1_1:38817519-38817538 None:intergenic 25.0%
! TTATGCGTCAAATAAAAAAG+AGG + chr1_1:38817669-38817688 None:intergenic 25.0%
!! TAATTCATCAAGGCATTTAT+TGG - chr1_1:38817686-38817705 Msa0021550:CDS 25.0%
!!! TTTTTTTATTTTCCTGTTGC+AGG - chr1_1:38817754-38817773 Msa0021550:intron 25.0%
!!! TAAGACTGGTTTGTTATTAT+TGG - chr1_1:38817914-38817933 Msa0021550:CDS 25.0%
!!! AAGACTGGTTTGTTATTATT+GGG - chr1_1:38817915-38817934 Msa0021550:CDS 25.0%
!!! GTTTGTTATTATTGGGAATT+GGG - chr1_1:38817922-38817941 Msa0021550:CDS 25.0%
!!! TTTGTTATTATTGGGAATTG+GGG - chr1_1:38817923-38817942 Msa0021550:CDS 25.0%
! TTCATCTATAGTATATTGAG+AGG - chr1_1:38818286-38818305 Msa0021550:intron 25.0%
! CAAGTACATTATCAAGAAAT+AGG + chr1_1:38818313-38818332 None:intergenic 25.0%
!!! CTATTTCTTGATAATGTACT+TGG - chr1_1:38818311-38818330 Msa0021550:intron 25.0%
! AAGCATAAAAATATCAAGCA+GGG + chr1_1:38818351-38818370 None:intergenic 25.0%
! AATCTAACCAACTCATATTA+GGG - chr1_1:38818424-38818443 Msa0021550:intron 25.0%
! AAGTAGTAGTCATAAAAGAA+TGG + chr1_1:38818561-38818580 None:intergenic 25.0%
! CCATTTCAAATATGAATTAC+TGG + chr1_1:38819068-38819087 None:intergenic 25.0%
! CCAGTAATTCATATTTGAAA+TGG - chr1_1:38819065-38819084 Msa0021550:intron 25.0%
!!! GAAATGGTTTTGAATCAAAT+TGG - chr1_1:38819081-38819100 Msa0021550:intron 25.0%
!!! TAACTAAGTGCATTTTTTCT+TGG - chr1_1:38819164-38819183 Msa0021550:intron 25.0%
! AGACATGCTTAAATTTAAGT+AGG - chr1_1:38819337-38819356 Msa0021550:intron 25.0%
! CATTATTGGATACTTGTTTA+AGG - chr1_1:38819406-38819425 Msa0021550:intron 25.0%
! TTGTATTGGAATAAAAGTTC+AGG + chr1_1:38819655-38819674 None:intergenic 25.0%
! CATGAATTATCTAATTATCG+CGG + chr1_1:38819693-38819712 None:intergenic 25.0%
! TCACAAAAATTGTCATCAAA+TGG + chr1_1:38819826-38819845 None:intergenic 25.0%
! AATAAGAAGAGAGAAAAAGA+AGG + chr1_1:38819852-38819871 None:intergenic 25.0%
!! TTCTTTTTCTCTCTTCTTAT+TGG - chr1_1:38819851-38819870 Msa0021550:intron 25.0%
!!! TTTTCTCTCTCTTTTGTTTT+TGG + chr1_1:38819877-38819896 None:intergenic 25.0%
! AAAACAAAAGAGAGAGAAAA+AGG - chr1_1:38819877-38819896 Msa0021550:intron 25.0%
! GTTAGTTAGAACATAAAACA+TGG + chr1_1:38820059-38820078 None:intergenic 25.0%
! ACTAACAAGTCAACATTATT+TGG - chr1_1:38820073-38820092 Msa0021550:intron 25.0%
! TGAATGATGACATATTCTTA+TGG - chr1_1:38820113-38820132 Msa0021550:intron 25.0%
! AGGAATACTAACTAATAAGA+AGG + chr1_1:38820173-38820192 None:intergenic 25.0%
! TTAGTATTCCTTATGCAAAA+TGG - chr1_1:38820182-38820201 Msa0021550:intron 25.0%
! AAAAATACCAAGATGAAAGA+GGG + chr1_1:38820210-38820229 None:intergenic 25.0%
! AAAAAATACCAAGATGAAAG+AGG + chr1_1:38820211-38820230 None:intergenic 25.0%
!!! TTTTGATTAGTATGGTCTAA+TGG + chr1_1:38820413-38820432 None:intergenic 25.0%
!!! TAGTTCTCTTTTGATTAGTA+TGG + chr1_1:38820421-38820440 None:intergenic 25.0%
!! TAAACGTTTTCCCTTAATAA+AGG + chr1_1:38820965-38820984 None:intergenic 25.0%
! ACAAATAGAGACCTAAAATT+GGG + chr1_1:38821449-38821468 None:intergenic 25.0%
! AACAAATAGAGACCTAAAAT+TGG + chr1_1:38821450-38821469 None:intergenic 25.0%
! TATTGTTCATGAATGTTCTT+AGG - chr1_1:38821684-38821703 Msa0021550:intron 25.0%
!!! GAACTTGTATGTTGATTTAT+CGG - chr1_1:38821798-38821817 Msa0021550:intron 25.0%
!! TAGCTAGTTTAAAAGACATT+TGG + chr1_1:38821830-38821849 None:intergenic 25.0%
! TGTGGAAGATCAAATAATAA+TGG + chr1_1:38821864-38821883 None:intergenic 25.0%
! TGAAAAAAAAATGCTTGTGA+AGG - chr1_1:38822081-38822100 Msa0021550:intron 25.0%
! AAAAATAAGCCAATTCAAAC+GGG - chr1_1:38822182-38822201 Msa0021550:intron 25.0%
! AAATCAAGGAATCTACAATT+TGG - chr1_1:38822558-38822577 Msa0021550:intron 25.0%
! AATCAAGGAATCTACAATTT+GGG - chr1_1:38822559-38822578 Msa0021550:intron 25.0%
! TAAGAAAAAGGTTTCCTAAT+TGG - chr1_1:38822678-38822697 Msa0021550:intron 25.0%
! TAGAAAAAACCTATCCAATT+AGG + chr1_1:38822695-38822714 None:intergenic 25.0%
! TATTATTAATCCTATCCTGA+CGG + chr1_1:38822753-38822772 None:intergenic 25.0%
! ATTAATGTATCATGTCCAAT+TGG - chr1_1:38822775-38822794 Msa0021550:CDS 25.0%
!!! CTTTTGTTTGATAAACCAAT+TGG + chr1_1:38822793-38822812 None:intergenic 25.0%
! ATCAAACAAAAGATAAGAGT+AGG - chr1_1:38822801-38822820 Msa0021550:CDS 25.0%
!!! GTGATACATATTTTCTAGAA+CGG - chr1_1:38822925-38822944 Msa0021550:CDS 25.0%
!!! TGATACATATTTTCTAGAAC+GGG - chr1_1:38822926-38822945 Msa0021550:intron 25.0%
! TTGACATATTGCAATTTGAA+TGG - chr1_1:38823127-38823146 Msa0021550:intron 25.0%
!!! GCAATATTTCTAGAATATGA+AGG + chr1_1:38823595-38823614 None:intergenic 25.0%
! TCATAATAATTGTTAAGGTG+GGG + chr1_1:38823728-38823747 None:intergenic 25.0%
! TAGCAGAGTAATATAATGAA+AGG + chr1_1:38824126-38824145 None:intergenic 25.0%
! GATAGTTAACATGTAAAACT+AGG + chr1_1:38824194-38824213 None:intergenic 25.0%
!!! TTCACACCTTTTAAGTTTAA+AGG + chr1_1:38824301-38824320 None:intergenic 25.0%
!! TAAACTTAAAAGGTGTGAAA+TGG - chr1_1:38824302-38824321 Msa0021550:intron 25.0%
! ATTCCAGCAACATTTATAAA+AGG + chr1_1:38824425-38824444 None:intergenic 25.0%
!!! TGTGTCTTCAACATTTTAAT+GGG + chr1_1:38824721-38824740 None:intergenic 25.0%
!! TTGTGTCTTCAACATTTTAA+TGG + chr1_1:38824722-38824741 None:intergenic 25.0%
!! ATTGAACAAAACAATTTTGG+AGG + chr1_1:38824787-38824806 None:intergenic 25.0%
! AAATGAATATCAAAAGGTTG+AGG - chr1_1:38824828-38824847 Msa0021550:intron 25.0%
! TGTATTTATTCCAGTATCAA+GGG + chr1_1:38824953-38824972 None:intergenic 25.0%
! TTGTATTTATTCCAGTATCA+AGG + chr1_1:38824954-38824973 None:intergenic 25.0%
! GAATAAAGAAAACCAAATCA+GGG + chr1_1:38825145-38825164 None:intergenic 25.0%
! AGAATAAAGAAAACCAAATC+AGG + chr1_1:38825146-38825165 None:intergenic 25.0%
! TTCTTATCCCTATAATTTAG+CGG - chr1_1:38825211-38825230 Msa0021550:intron 25.0%
! TTCAATCAATTCATTCAAGA+TGG - chr1_1:38825292-38825311 Msa0021550:intron 25.0%
! AAAACGTAGCAAAATATTCA+AGG - chr1_1:38825617-38825636 Msa0021550:intron 25.0%
! ATGTATCAACTGATAAACTA+AGG - chr1_1:38825733-38825752 Msa0021550:intron 25.0%
! GTATATCAAAGAAGGAAAAT+GGG + chr1_1:38826057-38826076 None:intergenic 25.0%
! TGTATATCAAAGAAGGAAAA+TGG + chr1_1:38826058-38826077 None:intergenic 25.0%
!! CCAATTTTTGATACAATAAC+AGG + chr1_1:38826147-38826166 None:intergenic 25.0%
! CCTGTTATTGTATCAAAAAT+TGG - chr1_1:38826144-38826163 Msa0021550:intron 25.0%
! TTTACAGTAATACTAGATGT+CGG + chr1_1:38826670-38826689 None:intergenic 25.0%
! ACATCTAGTATTACTGTAAA+GGG - chr1_1:38826670-38826689 Msa0021550:intron 25.0%
! TGTTGTATATGTCAATGTAT+AGG + chr1_1:38826797-38826816 None:intergenic 25.0%
! TTTACAGTAATACTAGATGT+CGG + chr1_1:38826670-38826689 None:intergenic 25.0%
! ACATCTAGTATTACTGTAAA+GGG - chr1_1:38826670-38826689 Msa0021550:intron 25.0%
! TGTTGTATATGTCAATGTAT+AGG + chr1_1:38826797-38826816 None:intergenic 25.0%
!! AAGTAGTATATTAGTTTGAG+TGG + chr1_1:38827061-38827080 None:intergenic 25.0%
!!! ATTTTTTACATTGTTCCAGT+GGG - chr1_1:38827222-38827241 Msa0021550:intron 25.0%
! TATAAAACTTAGAAAGTTGG+AGG - chr1_1:38827280-38827299 Msa0021550:intron 25.0%
! TTAAAGGATTGCAATAACTT+GGG - chr1_1:38827365-38827384 Msa0021550:intron 25.0%
! ATGGTAATCACATTGAATTT+GGG - chr1_1:38827416-38827435 Msa0021550:intron 25.0%
! TACGACTTGCAAAAATATTT+GGG + chr1_1:38827974-38827993 None:intergenic 25.0%
! CAAGTTAGAATCTATTATAG+AGG + chr1_1:38828114-38828133 None:intergenic 25.0%
!! TTTTCATCACTTAAGAATGA+GGG + chr1_1:38828272-38828291 None:intergenic 25.0%
!! ATTTTCATCACTTAAGAATG+AGG + chr1_1:38828273-38828292 None:intergenic 25.0%
!!! TTCATCTGTTTTTTTCTTCA+TGG + chr1_1:38828303-38828322 None:intergenic 25.0%
!! TTCTGTTTATGAATTTTACC+AGG - chr1_1:38828517-38828536 Msa0021550:intron 25.0%
! GACACATTACTATCATTAAT+TGG + chr1_1:38828593-38828612 None:intergenic 25.0%
! TTCATAAAGAACACTTAAGT+AGG + chr1_1:38828662-38828681 None:intergenic 25.0%
AACAACAACAACAACAACAA+CGG + chr1_1:38810104-38810123 None:intergenic 30.0%
! CAAAACAATTTGGCTCATTT+GGG + chr1_1:38810139-38810158 None:intergenic 30.0%
TTCGTTATACTCTGTTGTAA+TGG - chr1_1:38810226-38810245 Msa0021550:CDS 30.0%
TCTACAAGATTATTCTTGCT+TGG - chr1_1:38810294-38810313 Msa0021550:intron 30.0%
CTACAAGATTATTCTTGCTT+GGG - chr1_1:38810295-38810314 Msa0021550:intron 30.0%
CAGAATAAGAGAAGAAACAA+TGG - chr1_1:38810459-38810478 Msa0021550:intron 30.0%
CACAATACATATCCTATATC+GGG - chr1_1:38810747-38810766 Msa0021550:intron 30.0%
CTTATGCAAGCTAATACATA+AGG + chr1_1:38810810-38810829 None:intergenic 30.0%
!! TAATGAGTTGGGTTGAAATA+AGG + chr1_1:38810992-38811011 None:intergenic 30.0%
TATTCAGAGGTTAATGAGTT+GGG + chr1_1:38811003-38811022 None:intergenic 30.0%
ATATTCAGAGGTTAATGAGT+TGG + chr1_1:38811004-38811023 None:intergenic 30.0%
TACTGGATATTTAACAACAC+TGG + chr1_1:38811147-38811166 None:intergenic 30.0%
CAAAGTTGCTTAATCGTATT+GGG + chr1_1:38811211-38811230 None:intergenic 30.0%
TCAAAGTTGCTTAATCGTAT+TGG + chr1_1:38811212-38811231 None:intergenic 30.0%
CTTTGATGTTTCCGAAATAT+CGG - chr1_1:38811226-38811245 Msa0021550:intron 30.0%
TAAGACAGGATCATCATATT+GGG + chr1_1:38811383-38811402 None:intergenic 30.0%
GATTCAATAGAAGAAGTTGA+AGG - chr1_1:38811442-38811461 Msa0021550:intron 30.0%
TGAGGATAATGATTATGTTG+GGG - chr1_1:38811486-38811505 Msa0021550:intron 30.0%
TATCTCTTCACGGAAAATAT+CGG + chr1_1:38811853-38811872 None:intergenic 30.0%
GTGTTAGAAATATCTCTTCA+CGG + chr1_1:38811863-38811882 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr1_1:38811916-38811935 Msa0021550:intron 30.0%
!! ATTCTTTGTATTGGTTCTGA+TGG - chr1_1:38811978-38811997 Msa0021550:intron 30.0%
AGCTATCTGTTTGATAAACT+TGG + chr1_1:38812004-38812023 None:intergenic 30.0%
ATAAAAACTCTTCAGCATCA+AGG + chr1_1:38812140-38812159 None:intergenic 30.0%
!! TTTTATATTGGTGATTGCAG+GGG - chr1_1:38812164-38812183 Msa0021550:intron 30.0%
TCTAGAAAATGAAAGTCATC+TGG + chr1_1:38812252-38812271 None:intergenic 30.0%
! GTTTCTTTTTGATATGGAAG+AGG - chr1_1:38812272-38812291 Msa0021550:CDS 30.0%
! TTTCAAATGAAGAGGTACAA+AGG - chr1_1:38812328-38812347 Msa0021550:CDS 30.0%
! TTCAAATGAAGAGGTACAAA+GGG - chr1_1:38812329-38812348 Msa0021550:CDS 30.0%
!! GGGTTTAAGATTTGTGTTTT+TGG - chr1_1:38812349-38812368 Msa0021550:CDS 30.0%
!! TTGAGTATTGACAGGTAAAA+AGG + chr1_1:38812420-38812439 None:intergenic 30.0%
! GGAATCAATTGCATTTTATG+AGG - chr1_1:38812601-38812620 Msa0021550:intron 30.0%
!! TTGTTTTATAGGCACTATGT+AGG - chr1_1:38812923-38812942 Msa0021550:intron 30.0%
CGAGCATCTTTGTATATAAA+AGG + chr1_1:38812994-38813013 None:intergenic 30.0%
ATGCATTTGATGCAAATATG+TGG - chr1_1:38813208-38813227 Msa0021550:intron 30.0%
TAAGATTTCGGGGAAAATAA+AGG + chr1_1:38813291-38813310 None:intergenic 30.0%
TCTACTCAAATAAGATTTCG+GGG + chr1_1:38813301-38813320 None:intergenic 30.0%
AATGAAAAGAGAAACAAACC+TGG - chr1_1:38813533-38813552 Msa0021550:intron 30.0%
ATGAAAAGAGAAACAAACCT+GGG - chr1_1:38813534-38813553 Msa0021550:intron 30.0%
GACTTATTTCGTTAGAAGTT+TGG + chr1_1:38813659-38813678 None:intergenic 30.0%
GAAAACATTGAACTACATTG+AGG - chr1_1:38813783-38813802 Msa0021550:CDS 30.0%
!! CTGAAGATAGTTTTACCATT+TGG - chr1_1:38813813-38813832 Msa0021550:CDS 30.0%
TGGATCAAAGTTAAAACTGA+TGG + chr1_1:38813960-38813979 None:intergenic 30.0%
TTAACTTTGATCCAATGACA+AGG - chr1_1:38813966-38813985 Msa0021550:CDS 30.0%
! CTTTTTGTCCAATTTCCAAT+AGG - chr1_1:38814095-38814114 Msa0021550:intron 30.0%
TTTAACTCTACATCTCCTAT+TGG + chr1_1:38814113-38814132 None:intergenic 30.0%
ACCAAAATATCATGAACATG+AGG - chr1_1:38814233-38814252 Msa0021550:intron 30.0%
CCAAAATATCATGAACATGA+GGG - chr1_1:38814234-38814253 Msa0021550:intron 30.0%
!! TTTTAAGTACACTGAATGGA+AGG - chr1_1:38814668-38814687 Msa0021550:intron 30.0%
CACATTGTAACACCAATTAA+TGG - chr1_1:38814780-38814799 Msa0021550:intron 30.0%
AGTTCTACACTTCCATTAAT+TGG + chr1_1:38814795-38814814 None:intergenic 30.0%
! ATATCAAAGTGTTCAAGGTT+GGG - chr1_1:38814818-38814837 Msa0021550:intron 30.0%
!!! ACTTTGCATTTTTTAGTAGG+TGG - chr1_1:38815094-38815113 Msa0021550:intron 30.0%
!! ACATCGAGTTGGATAATATT+TGG + chr1_1:38815129-38815148 None:intergenic 30.0%
ATGAAGTCTTCAACATAATG+AGG + chr1_1:38815379-38815398 None:intergenic 30.0%
!! TATTAGTTTGTAAGGCTTAC+AGG - chr1_1:38815499-38815518 Msa0021550:intron 30.0%
AATATTAAATGCTGTTGGAG+AGG - chr1_1:38815643-38815662 Msa0021550:intron 30.0%
CGTATTTATCCAAAGGTAAT+GGG + chr1_1:38815694-38815713 None:intergenic 30.0%
ACGTATTTATCCAAAGGTAA+TGG + chr1_1:38815695-38815714 None:intergenic 30.0%
AATTGCTATATATGGGTCTT+AGG + chr1_1:38816058-38816077 None:intergenic 30.0%
! GACCCATATATAGCAATTTT+CGG - chr1_1:38816060-38816079 Msa0021550:intron 30.0%
GTACCGAAAATTGCTATATA+TGG + chr1_1:38816066-38816085 None:intergenic 30.0%
! TTTTCTTGAAAAACTAAGCC+CGG - chr1_1:38816385-38816404 Msa0021550:intron 30.0%
TTTCGTTCTAATCATGAATC+CGG + chr1_1:38816407-38816426 None:intergenic 30.0%
CAAAAAAAAAAATTCCGACG+CGG - chr1_1:38816464-38816483 Msa0021550:intron 30.0%
CACTAAAAATTTGTAGAGAG+AGG - chr1_1:38816574-38816593 Msa0021550:intron 30.0%
GGAAGAAGAAAGAATTATGA+AGG - chr1_1:38816595-38816614 Msa0021550:intron 30.0%
! TTTTATAGGTGTAAACGAAC+CGG - chr1_1:38816636-38816655 Msa0021550:intron 30.0%
! TTGTATTTTCAAAGCAATGC+AGG - chr1_1:38817044-38817063 Msa0021550:intron 30.0%
! TGTATTTTCAAAGCAATGCA+GGG - chr1_1:38817045-38817064 Msa0021550:intron 30.0%
!! AAACAATAAACAAGAGTGTC+TGG - chr1_1:38817109-38817128 Msa0021550:intron 30.0%
TGTCTGGAAATTAGTTAAGA+TGG - chr1_1:38817125-38817144 Msa0021550:intron 30.0%
TGGAGTTTGGCATTTAATTA+AGG - chr1_1:38817161-38817180 Msa0021550:intron 30.0%
! AAGAAACATGTTGAGAGTAT+AGG + chr1_1:38817287-38817306 None:intergenic 30.0%
TGGATGAGCATCAAAATAAA+AGG + chr1_1:38817502-38817521 None:intergenic 30.0%
ATTTGACGCATAATTCATCA+AGG - chr1_1:38817676-38817695 Msa0021550:CDS 30.0%
!! AATTCTCTGGAATTAACAGA+TGG + chr1_1:38817736-38817755 None:intergenic 30.0%
AAAAACCTTTGTTCTGATAC+AGG - chr1_1:38817790-38817809 Msa0021550:intron 30.0%
TTGAATTCTTGTCTTAAGAC+TGG - chr1_1:38817900-38817919 Msa0021550:CDS 30.0%
!! GGTTTGTTATTATTGGGAAT+TGG - chr1_1:38817921-38817940 Msa0021550:CDS 30.0%
!! TGTTATTTCCCCCAAAAAAA+CGG + chr1_1:38817999-38818018 None:intergenic 30.0%
! GGGAAATAACATGAGTTTTA+AGG - chr1_1:38818008-38818027 Msa0021550:intron 30.0%
AGCATAAAAATATCAAGCAG+GGG + chr1_1:38818350-38818369 None:intergenic 30.0%
GAAGCATAAAAATATCAAGC+AGG + chr1_1:38818352-38818371 None:intergenic 30.0%
GAATCTAACCAACTCATATT+AGG - chr1_1:38818423-38818442 Msa0021550:intron 30.0%
ATCTAACCAACTCATATTAG+GGG - chr1_1:38818425-38818444 Msa0021550:intron 30.0%
ATGACTACTACTTCTATTTC+TGG - chr1_1:38818568-38818587 Msa0021550:intron 30.0%
!!! CTTAAGAGCATTTTTAGTAG+AGG - chr1_1:38818627-38818646 Msa0021550:intron 30.0%
AAAACTTACTTCTCCTCAAT+TGG + chr1_1:38818812-38818831 None:intergenic 30.0%
! TCATGAAAACTTAGCTTTCA+TGG - chr1_1:38818861-38818880 Msa0021550:intron 30.0%
!! AACTTAGCTTTCATGGATTT+TGG - chr1_1:38818868-38818887 Msa0021550:intron 30.0%
! TTTTCATTCTTGGTTTCTTC+TGG - chr1_1:38818999-38819018 Msa0021550:intron 30.0%
! TGGAAGATTATTTAAAGCTG+AGG - chr1_1:38819236-38819255 Msa0021550:intron 30.0%
! GGAAGATTATTTAAAGCTGA+GGG - chr1_1:38819237-38819256 Msa0021550:intron 30.0%
AACACTTTGCTTAAAGTAGA+AGG - chr1_1:38819374-38819393 Msa0021550:intron 30.0%
GAAGGCTAAATGATCATTAT+TGG - chr1_1:38819392-38819411 Msa0021550:intron 30.0%
TATTGGATACTTGTTTAAGG+AGG - chr1_1:38819409-38819428 Msa0021550:intron 30.0%
! TTCCTGAACTTTTATTCCAT+TGG - chr1_1:38819521-38819540 Msa0021550:intron 30.0%
ATCCAATGGAATAAAAGTTC+AGG + chr1_1:38819526-38819545 None:intergenic 30.0%
TTCCATTGGATACTTGTTTA+AGG - chr1_1:38819535-38819554 Msa0021550:intron 30.0%
!! ATTCTGGTTCCTATTTGTAT+TGG + chr1_1:38819669-38819688 None:intergenic 30.0%
CGCGATAATTAGATAATTCA+TGG - chr1_1:38819691-38819710 Msa0021550:CDS 30.0%
ATAGGACATGCAATGATAAA+TGG + chr1_1:38819999-38820018 None:intergenic 30.0%
GAATGAGTGTATCATTTGAT+AGG + chr1_1:38820271-38820290 None:intergenic 30.0%
CTAATTCATTTCCAGTAGTT+GGG + chr1_1:38820657-38820676 None:intergenic 30.0%
ACTAATTCATTTCCAGTAGT+TGG + chr1_1:38820658-38820677 None:intergenic 30.0%
AAATAGAGACCTAAAATTGG+GGG + chr1_1:38821447-38821466 None:intergenic 30.0%
CAAATAGAGACCTAAAATTG+GGG + chr1_1:38821448-38821467 None:intergenic 30.0%
TGGCAATAACATCCTAATAA+CGG + chr1_1:38821524-38821543 None:intergenic 30.0%
!! AACATTTTAACGTAGTGATG+TGG + chr1_1:38821882-38821901 None:intergenic 30.0%
AATGTTCTGTGCATGAATAA+GGG + chr1_1:38822208-38822227 None:intergenic 30.0%
AAATGTTCTGTGCATGAATA+AGG + chr1_1:38822209-38822228 None:intergenic 30.0%
!! AAATTTGTTTTCTGGGTTCA+TGG + chr1_1:38822391-38822410 None:intergenic 30.0%
! TAATCTTTAAAAAACCCCTC+AGG - chr1_1:38822410-38822429 Msa0021550:intron 30.0%
! AATCTAAGACTCTTCTTTGA+CGG + chr1_1:38822527-38822546 None:intergenic 30.0%
! TTGAATACGGAACGATTTTT+GGG - chr1_1:38822616-38822635 Msa0021550:intron 30.0%
AAAAGGTTTCCTAATTGGAT+AGG - chr1_1:38822683-38822702 Msa0021550:intron 30.0%
! GTATTTTCTATCCTGACTAT+TGG + chr1_1:38822724-38822743 None:intergenic 30.0%
AGTCAGGATAGAAAATACAA+AGG - chr1_1:38822726-38822745 Msa0021550:intron 30.0%
GTCAGGATAGGATTAATAAT+AGG - chr1_1:38822752-38822771 Msa0021550:intron 30.0%
CAAACTACTTTCTAACTCAA+AGG + chr1_1:38822955-38822974 None:intergenic 30.0%
ACGCACTATATAAGAAATCA+AGG + chr1_1:38822999-38823018 None:intergenic 30.0%
TTTCTTATATAGTGCGTGTT+TGG - chr1_1:38823002-38823021 Msa0021550:intron 30.0%
! AGACATTATTTCTCATCAGT+AGG - chr1_1:38823086-38823105 Msa0021550:intron 30.0%
TGCAATTTGAATGGTTCATA+TGG - chr1_1:38823136-38823155 Msa0021550:intron 30.0%
GCAATTTGAATGGTTCATAT+GGG - chr1_1:38823137-38823156 Msa0021550:intron 30.0%
TAAACATCAAAATTTGACCC+CGG + chr1_1:38823178-38823197 None:intergenic 30.0%
CCTTGAAATACATACAATTG+TGG + chr1_1:38823319-38823338 None:intergenic 30.0%
CCACAATTGTATGTATTTCA+AGG - chr1_1:38823316-38823335 Msa0021550:intron 30.0%
TGTAAGAGTGAAATCTTCTT+TGG - chr1_1:38823501-38823520 Msa0021550:intron 30.0%
AGAATATGAAGGAACTTCTT+TGG + chr1_1:38823584-38823603 None:intergenic 30.0%
TATTGCGTGACTATCAATAA+AGG - chr1_1:38823609-38823628 Msa0021550:intron 30.0%
TAAAATGAAGGGTCAAGATT+TGG - chr1_1:38823773-38823792 Msa0021550:intron 30.0%
!! ATGACATGTTGATTCTAAAC+AGG - chr1_1:38824030-38824049 Msa0021550:intron 30.0%
! TTTTTGCATTTATTGGCCAA+GGG + chr1_1:38824076-38824095 None:intergenic 30.0%
!!! TTTTTTGCATTTATTGGCCA+AGG + chr1_1:38824077-38824096 None:intergenic 30.0%
CACTTCAGTACAAATTTCAA+TGG - chr1_1:38824221-38824240 Msa0021550:intron 30.0%
TCTTTACAGATGTTGTCAAA+AGG + chr1_1:38824255-38824274 None:intergenic 30.0%
! TTTAAGTTTAAAGGCTACGA+TGG + chr1_1:38824292-38824311 None:intergenic 30.0%
TCGTAGCCTTTAAACTTAAA+AGG - chr1_1:38824292-38824311 Msa0021550:intron 30.0%
! GAACCTTTTATAAATGTTGC+TGG - chr1_1:38824419-38824438 Msa0021550:intron 30.0%
!!! CTCTTTCTTGCTATTTTCTA+AGG - chr1_1:38824492-38824511 Msa0021550:intron 30.0%
!!! TTCTTGCTATTTTCTAAGGT+TGG - chr1_1:38824496-38824515 Msa0021550:intron 30.0%
TTTAGCAATGTCCGAAATTA+CGG + chr1_1:38824545-38824564 None:intergenic 30.0%
! AGCAATTATTCTTGTCCTTT+TGG - chr1_1:38824976-38824995 Msa0021550:intron 30.0%
ACCACAAAACTAAGTTTCAA+GGG - chr1_1:38825070-38825089 Msa0021550:intron 30.0%
ATCAAGACCGCTAAATTATA+GGG + chr1_1:38825221-38825240 None:intergenic 30.0%
AATCAAGACCGCTAAATTAT+AGG + chr1_1:38825222-38825241 None:intergenic 30.0%
AATTCATTCAAGATGGTATC+AGG - chr1_1:38825299-38825318 Msa0021550:intron 30.0%
ATTCATTCAAGATGGTATCA+GGG - chr1_1:38825300-38825319 Msa0021550:intron 30.0%
!!! ATTTTTGATGATGCTTAGTC+AGG - chr1_1:38825524-38825543 Msa0021550:intron 30.0%
TGCAAAGAAATCATATCCAA+GGG + chr1_1:38825672-38825691 None:intergenic 30.0%
ATGCAAAGAAATCATATCCA+AGG + chr1_1:38825673-38825692 None:intergenic 30.0%
TTCAAGAAACTCTATCTTAC+AGG + chr1_1:38825713-38825732 None:intergenic 30.0%
TTGTTATAAAACTCCATCGA+GGG + chr1_1:38825965-38825984 None:intergenic 30.0%
ATTGTTATAAAACTCCATCG+AGG + chr1_1:38825966-38825985 None:intergenic 30.0%
!! GGAGTTTTATAACAATTCCT+TGG - chr1_1:38825970-38825989 Msa0021550:CDS 30.0%
TATAACAATTCCTTGGAAGA+TGG - chr1_1:38825977-38825996 Msa0021550:CDS 30.0%
ATAACAATTCCTTGGAAGAT+GGG - chr1_1:38825978-38825997 Msa0021550:CDS 30.0%
GAAAAGAAACTAAGCCATTT+GGG - chr1_1:38826083-38826102 Msa0021550:intron 30.0%
! TATCATAAAGCTAGTTTACC+TGG + chr1_1:38826318-38826337 None:intergenic 30.0%
AATCAACAATTGCAGATTGT+TGG - chr1_1:38826387-38826406 Msa0021550:intron 30.0%
CTTGATCAGAGTTTATAAAG+AGG - chr1_1:38826536-38826555 Msa0021550:intron 30.0%
TCAAGTGTCTGTTGAAATTT+GGG + chr1_1:38826608-38826627 None:intergenic 30.0%
TTCAAGTGTCTGTTGAAATT+TGG + chr1_1:38826609-38826628 None:intergenic 30.0%
TTTCAACAGACACTTGAAAA+TGG - chr1_1:38826611-38826630 Msa0021550:intron 30.0%
TTACAGTAATACTAGATGTC+GGG + chr1_1:38826669-38826688 None:intergenic 30.0%
GACATCTAGTATTACTGTAA+AGG - chr1_1:38826669-38826688 Msa0021550:intron 30.0%
TTACAGTAATACTAGATGTC+GGG + chr1_1:38826669-38826688 None:intergenic 30.0%
GACATCTAGTATTACTGTAA+AGG - chr1_1:38826669-38826688 Msa0021550:intron 30.0%
TTTGAGTGGAAACATTATGT+TGG + chr1_1:38827047-38827066 None:intergenic 30.0%
!!! CATTTTTTACATTGTTCCAG+TGG - chr1_1:38827221-38827240 Msa0021550:intron 30.0%
! CTCAATTAGTTGTCACTTAA+AGG - chr1_1:38827349-38827368 Msa0021550:intron 30.0%
CTTAAAGGATTGCAATAACT+TGG - chr1_1:38827364-38827383 Msa0021550:intron 30.0%
! TGTAAGAAGCATATTAGAGA+GGG + chr1_1:38827397-38827416 None:intergenic 30.0%
! ATGTAAGAAGCATATTAGAG+AGG + chr1_1:38827398-38827417 None:intergenic 30.0%
TCTCTAATATGCTTCTTACA+TGG - chr1_1:38827397-38827416 Msa0021550:intron 30.0%
CATGGTAATCACATTGAATT+TGG - chr1_1:38827415-38827434 Msa0021550:intron 30.0%
! AGTACTCTCATTTCTTTTTC+AGG - chr1_1:38827449-38827468 Msa0021550:intron 30.0%
!! GTACTCTCATTTCTTTTTCA+GGG - chr1_1:38827450-38827469 Msa0021550:intron 30.0%
!!! TACTCTCATTTCTTTTTCAG+GGG - chr1_1:38827451-38827470 Msa0021550:intron 30.0%
! TGTTGGTACTGTATCATTTT+GGG - chr1_1:38827589-38827608 Msa0021550:intron 30.0%
!! CATTTTTGTTGTGTTTCTGT+AGG - chr1_1:38827656-38827675 Msa0021550:intron 30.0%
TGGGTCAATATCAAATTAGA+TGG + chr1_1:38827955-38827974 None:intergenic 30.0%
GTACGACTTGCAAAAATATT+TGG + chr1_1:38827975-38827994 None:intergenic 30.0%
!! TGTTTGAATTCACTTTTGTC+AGG - chr1_1:38828017-38828036 Msa0021550:CDS 30.0%
TCAGTGTTTGTTTGGTTATA+TGG + chr1_1:38828213-38828232 None:intergenic 30.0%
ATTTGTATAGATGAGCAGAA+AGG - chr1_1:38828494-38828513 Msa0021550:intron 30.0%
! TATGAATTTTACCAGGACTA+AGG - chr1_1:38828524-38828543 Msa0021550:intron 30.0%
TTTACAATTTACCTTAGTCC+TGG + chr1_1:38828538-38828557 None:intergenic 30.0%
GACTAAGGTAAATTGTAAAC+TGG - chr1_1:38828539-38828558 Msa0021550:intron 30.0%
TAAAGAACACTTAAGTAGGA+AGG + chr1_1:38828658-38828677 None:intergenic 30.0%
! GGGTTTAAGTTACCTGAAAA+TGG + chr1_1:38809935-38809954 None:intergenic 35.0%
! CCAAAACAATTTGGCTCATT+TGG + chr1_1:38810140-38810159 None:intergenic 35.0%
! CCAAATGAGCCAAATTGTTT+TGG - chr1_1:38810137-38810156 Msa0021550:CDS 35.0%
CTTGTAGAAACGATGAATTG+TGG + chr1_1:38810282-38810301 None:intergenic 35.0%
CAAGCACTATATCATTGAGT+GGG - chr1_1:38810924-38810943 Msa0021550:CDS 35.0%
! ACTATATCATTGAGTGGGTT+CGG - chr1_1:38810929-38810948 Msa0021550:CDS 35.0%
TTGAAATCTCGCCGATATTT+CGG + chr1_1:38811240-38811259 None:intergenic 35.0%
TTTATTGGAAACTGATGGCT+CGG - chr1_1:38811344-38811363 Msa0021550:intron 35.0%
AAGACAGGATCATCATATTG+GGG + chr1_1:38811382-38811401 None:intergenic 35.0%
CTAAGACAGGATCATCATAT+TGG + chr1_1:38811384-38811403 None:intergenic 35.0%
TGATCCTGTCTTAGTAGAAT+CGG - chr1_1:38811390-38811409 Msa0021550:intron 35.0%
! ATCCTCATTTTCAGATAGTG+AGG + chr1_1:38811473-38811492 None:intergenic 35.0%
TAATGATTATGTTGGGGAAG+AGG - chr1_1:38811492-38811511 Msa0021550:intron 35.0%
TGATATAGTACAAGCCTGTT+TGG + chr1_1:38811933-38811952 None:intergenic 35.0%
TACCTGTCAATACTCAATAC+TGG - chr1_1:38812423-38812442 Msa0021550:CDS 35.0%
ACCTGTCAATACTCAATACT+GGG - chr1_1:38812424-38812443 Msa0021550:CDS 35.0%
! AGTCTAACTCGAAGAACTTT+TGG + chr1_1:38812516-38812535 None:intergenic 35.0%
CTTGATTTCACATTATCTCC+CGG + chr1_1:38812546-38812565 None:intergenic 35.0%
TGACATGTAAATTCTTCAGG+TGG + chr1_1:38812968-38812987 None:intergenic 35.0%
ACCTGAAGAATTTACATGTC+AGG - chr1_1:38812967-38812986 Msa0021550:intron 35.0%
ACCTGACATGTAAATTCTTC+AGG + chr1_1:38812971-38812990 None:intergenic 35.0%
ATTTCGGGGAAAATAAAGGA+CGG + chr1_1:38813287-38813306 None:intergenic 35.0%
!! TGTTTGTTGTGTGTCTTCTT+AGG + chr1_1:38813497-38813516 None:intergenic 35.0%
! AATTTTCATTTGTCTGGGTG+TGG + chr1_1:38813613-38813632 None:intergenic 35.0%
AGTCCGAACTAATAAAAGCA+AGG - chr1_1:38813675-38813694 Msa0021550:intron 35.0%
CAATAACTGTGCGGATAAAT+TGG + chr1_1:38813747-38813766 None:intergenic 35.0%
! TGATGAAGGCAGTCTTTTTA+AGG + chr1_1:38814056-38814075 None:intergenic 35.0%
AAAAAGACTGCCTTCATCAA+AGG - chr1_1:38814057-38814076 Msa0021550:intron 35.0%
CTACATCTCCTATTGGAAAT+TGG + chr1_1:38814106-38814125 None:intergenic 35.0%
TAAACAGCTTTCTCTCAGAT+CGG + chr1_1:38814150-38814169 None:intergenic 35.0%
! CCCTCATGTTCATGATATTT+TGG + chr1_1:38814237-38814256 None:intergenic 35.0%
AAATATCATGAACATGAGGG+TGG - chr1_1:38814237-38814256 Msa0021550:intron 35.0%
AGAAAAGGGTCAACATTCAA+TGG + chr1_1:38814649-38814668 None:intergenic 35.0%
! CTTCCATATCAAAGTGTTCA+AGG - chr1_1:38814813-38814832 Msa0021550:intron 35.0%
CAACCTTGAACACTTTGATA+TGG + chr1_1:38814819-38814838 None:intergenic 35.0%
! CATATCAAAGTGTTCAAGGT+TGG - chr1_1:38814817-38814836 Msa0021550:intron 35.0%
GTTAGCATGTTATCAAGTAG+AGG - chr1_1:38814864-38814883 Msa0021550:intron 35.0%
! GATTGCGATTTGTTTCCAAA+AGG + chr1_1:38814900-38814919 None:intergenic 35.0%
!! TTGTGGTGCCATTATGAAAT+AGG - chr1_1:38814989-38815008 Msa0021550:intron 35.0%
CACAACTATAGATTCTGCTA+CGG + chr1_1:38815031-38815050 None:intergenic 35.0%
!! TTTTTAGTAGGTGGTTGTAG+TGG - chr1_1:38815103-38815122 Msa0021550:intron 35.0%
AGATGCAATAGTAAAACTGC+TGG - chr1_1:38815155-38815174 Msa0021550:intron 35.0%
ATGGAAAATCCCATTACCTT+TGG - chr1_1:38815682-38815701 Msa0021550:intron 35.0%
TTTCAATCCATATCAACGTG+AGG - chr1_1:38815724-38815743 Msa0021550:intron 35.0%
! GATGATTTTTGTGGTTGTTG+TGG + chr1_1:38816005-38816024 None:intergenic 35.0%
! GAGTCCGAAAATGATTTTTC+CGG + chr1_1:38816130-38816149 None:intergenic 35.0%
TTCGTTCTAATCATGAATCC+GGG + chr1_1:38816406-38816425 None:intergenic 35.0%
TGAAGGAAATAAACCGGAAA+TGG - chr1_1:38816612-38816631 Msa0021550:intron 35.0%
! AAACCGGAAATGGCTTTTAT+AGG - chr1_1:38816622-38816641 Msa0021550:intron 35.0%
ACACCTATAAAAGCCATTTC+CGG + chr1_1:38816628-38816647 None:intergenic 35.0%
AAGAAGAAAACCAAGTGAAC+CGG + chr1_1:38816682-38816701 None:intergenic 35.0%
ATTGATCCAGCTAGATCTAA+CGG + chr1_1:38816717-38816736 None:intergenic 35.0%
GAAAGTAGTAACAAAAGTCC+AGG + chr1_1:38816788-38816807 None:intergenic 35.0%
! AAGAGATTTTAGGCATGCAA+AGG + chr1_1:38816856-38816875 None:intergenic 35.0%
AAGATGGCATATTGTCATGT+TGG - chr1_1:38817141-38817160 Msa0021550:intron 35.0%
CATATTGTCATGTTGGAGTT+TGG - chr1_1:38817148-38817167 Msa0021550:intron 35.0%
AGTATAGGCAGAACTTGAAA+AGG + chr1_1:38817272-38817291 None:intergenic 35.0%
GACTGAAAAAGTCAAAGTCA+AGG + chr1_1:38817372-38817391 None:intergenic 35.0%
! AGACAGCGTCTTTTAATGTT+GGG + chr1_1:38817394-38817413 None:intergenic 35.0%
ATTAAAAGACGCTGTCTGTT+TGG - chr1_1:38817397-38817416 Msa0021550:intron 35.0%
ACAAACCTGTATCAGAACAA+AGG + chr1_1:38817798-38817817 None:intergenic 35.0%
!!! AACCATTTCCCCGTTTTTTT+GGG - chr1_1:38817986-38818005 Msa0021550:intron 35.0%
TTATTTCCCCCAAAAAAACG+GGG + chr1_1:38817997-38818016 None:intergenic 35.0%
! GTTATTTCCCCCAAAAAAAC+GGG + chr1_1:38817998-38818017 None:intergenic 35.0%
ACAAGAACTGAACCAAATCA+TGG + chr1_1:38818155-38818174 None:intergenic 35.0%
ATTTATTACCACCAGAGCAT+AGG - chr1_1:38818255-38818274 Msa0021550:intron 35.0%
CATAAAAATATCAAGCAGGG+GGG + chr1_1:38818348-38818367 None:intergenic 35.0%
GCATAAAAATATCAAGCAGG+GGG + chr1_1:38818349-38818368 None:intergenic 35.0%
TACTTTGACTGTACTCTCAT+TGG + chr1_1:38818514-38818533 None:intergenic 35.0%
GAAACCAAGAATGAAAAGAG+AGG + chr1_1:38818996-38819015 None:intergenic 35.0%
!!! TGTTGTACATTTTAGCTCTG+TGG - chr1_1:38819029-38819048 Msa0021550:intron 35.0%
TGGTTTCTCTTCATCTAAGT+TGG - chr1_1:38819184-38819203 Msa0021550:intron 35.0%
TTTGATATCTGCATTGTCCA+AGG - chr1_1:38819296-38819315 Msa0021550:intron 35.0%
ACTTCTCTCTCATTTATCCT+TGG + chr1_1:38819316-38819335 None:intergenic 35.0%
CTCCTTAAACAAGTATCCAA+TGG + chr1_1:38819411-38819430 None:intergenic 35.0%
CATTGGATACTTGTTTAAGG+AGG - chr1_1:38819538-38819557 Msa0021550:intron 35.0%
ATCTAATTATCGCGGTATTC+TGG + chr1_1:38819685-38819704 None:intergenic 35.0%
TTATATGCTCCTGTGTCTTA+TGG - chr1_1:38820030-38820049 Msa0021550:CDS 35.0%
CAGAATCAACTTTATCAGTG+CGG + chr1_1:38820149-38820168 None:intergenic 35.0%
! TCTGTTTTCATCTTCTCGAT+TGG - chr1_1:38820289-38820308 Msa0021550:intron 35.0%
GTATGGTCTAATGGTAGAAA+TGG + chr1_1:38820404-38820423 None:intergenic 35.0%
AGAAGAAACTGAACTAAGTG+TGG + chr1_1:38820913-38820932 None:intergenic 35.0%
GTGAAAGCTTGAACAATAAG+AGG + chr1_1:38821202-38821221 None:intergenic 35.0%
AGTTCCAATACTTGCACAAT+TGG - chr1_1:38821367-38821386 Msa0021550:intron 35.0%
CATTCCAATTGTGCAAGTAT+TGG + chr1_1:38821374-38821393 None:intergenic 35.0%
! TTGATGTTACCCCCAATTTT+AGG - chr1_1:38821435-38821454 Msa0021550:intron 35.0%
GGCAATAACATCCTAATAAC+GGG + chr1_1:38821523-38821542 None:intergenic 35.0%
ATGCTGTATTATAAGCAGAC+TGG - chr1_1:38821577-38821596 Msa0021550:intron 35.0%
!!! AAGCTTTGTCATTTTCATCG+TGG + chr1_1:38821713-38821732 None:intergenic 35.0%
TTATTGCCCGAAAATTGTGA+GGG - chr1_1:38821731-38821750 Msa0021550:intron 35.0%
TCAACATACAAGTTCGTCTA+GGG + chr1_1:38821793-38821812 None:intergenic 35.0%
ATCAACATACAAGTTCGTCT+AGG + chr1_1:38821794-38821813 None:intergenic 35.0%
TGCACAGAACATTTCCTATT+TGG - chr1_1:38822215-38822234 Msa0021550:intron 35.0%
CTGGACAGTTAATTCCAAAT+AGG + chr1_1:38822232-38822251 None:intergenic 35.0%
! CTATTTGGAATTAACTGTCC+AGG - chr1_1:38822230-38822249 Msa0021550:intron 35.0%
! GTTGAATACGGAACGATTTT+TGG - chr1_1:38822615-38822634 Msa0021550:intron 35.0%
!!! TTCTGTGGTTTGTTGTTTTG+AGG - chr1_1:38822649-38822668 Msa0021550:intron 35.0%
!!! TCTGTGGTTTGTTGTTTTGA+GGG - chr1_1:38822650-38822669 Msa0021550:intron 35.0%
TTGAGGGCGAAATAAGAAAA+AGG - chr1_1:38822666-38822685 Msa0021550:intron 35.0%
CAACTATTCAATGTGTCCAA+GGG + chr1_1:38822877-38822896 None:intergenic 35.0%
! TTGCTTCTCTAGATAGCTTT+TGG - chr1_1:38823057-38823076 Msa0021550:intron 35.0%
TGGGATTAACAAATGTCATC+CGG - chr1_1:38823156-38823175 Msa0021550:intron 35.0%
CTTACCAGTAGATGATATGT+TGG + chr1_1:38823235-38823254 None:intergenic 35.0%
! TTATCTTCTTTGGTCTTTGC+AGG - chr1_1:38823387-38823406 Msa0021550:intron 35.0%
! ATTTGAAGCACTAAAGCTGA+GGG + chr1_1:38823422-38823441 None:intergenic 35.0%
ACGATAATTGCAATTTGTGC+AGG - chr1_1:38823633-38823652 Msa0021550:intron 35.0%
! TTTTTGTGAAGGGATTGTAG+TGG - chr1_1:38823681-38823700 Msa0021550:intron 35.0%
TAAGTCTTTAGACTCACTCT+TGG - chr1_1:38823798-38823817 Msa0021550:intron 35.0%
!! ACATGTTGATTCTAAACAGG+TGG - chr1_1:38824033-38824052 Msa0021550:intron 35.0%
ATAGCAAGAAAGAGTAACAG+TGG + chr1_1:38824486-38824505 None:intergenic 35.0%
TCGGACATTGCTAAAAATCA+TGG - chr1_1:38824550-38824569 Msa0021550:intron 35.0%
CGGACATTGCTAAAAATCAT+GGG - chr1_1:38824551-38824570 Msa0021550:intron 35.0%
TGGGTAAGCAAATTATGTTG+CGG - chr1_1:38824570-38824589 Msa0021550:intron 35.0%
TTTGGCAGACTCATACTATT+TGG - chr1_1:38824909-38824928 Msa0021550:intron 35.0%
TTGCAAAACAGTCTTCCAAA+AGG + chr1_1:38824994-38825013 None:intergenic 35.0%
CACCACAAAACTAAGTTTCA+AGG - chr1_1:38825069-38825088 Msa0021550:intron 35.0%
!! TAAGTTTCAAGGGCATCATA+TGG - chr1_1:38825080-38825099 Msa0021550:intron 35.0%
AGTAACTCAAGAAGAGAGAA+GGG + chr1_1:38825121-38825140 None:intergenic 35.0%
TTTGCTAAACTCATCCGAAA+AGG + chr1_1:38825467-38825486 None:intergenic 35.0%
!! AATCACAGAGAAAAAGTGTC+AGG + chr1_1:38825907-38825926 None:intergenic 35.0%
TAACAATTCCTTGGAAGATG+GGG - chr1_1:38825979-38825998 Msa0021550:CDS 35.0%
AAATACAGACAGAACGTGAT+TGG - chr1_1:38826011-38826030 Msa0021550:CDS 35.0%
TTCCTTCTTTGATATACACG+AGG - chr1_1:38826060-38826079 Msa0021550:intron 35.0%
TCCTTCTTTGATATACACGA+GGG - chr1_1:38826061-38826080 Msa0021550:intron 35.0%
GGAAAAGAAACTAAGCCATT+TGG - chr1_1:38826082-38826101 Msa0021550:intron 35.0%
! AGGGTGTTATAATTGCAACT+TGG + chr1_1:38826201-38826220 None:intergenic 35.0%
CTTCAAAACGTTGTTTGAAG+AGG + chr1_1:38826240-38826259 None:intergenic 35.0%
!!! CAACGTTTTGAAGAGACTTT+TGG - chr1_1:38826247-38826266 Msa0021550:CDS 35.0%
GTGGATATATGTACCATTGA+TGG - chr1_1:38826289-38826308 Msa0021550:CDS 35.0%
GATCAGAGTTTATAAAGAGG+AGG - chr1_1:38826539-38826558 Msa0021550:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr1_1:38826583-38826602 None:intergenic 35.0%
CAAGTGTCTGTTGAAATTTG+GGG + chr1_1:38826607-38826626 None:intergenic 35.0%
! AATTTTCCAGACACTTGCAT+GGG + chr1_1:38826738-38826757 None:intergenic 35.0%
! AAATTTTCCAGACACTTGCA+TGG + chr1_1:38826739-38826758 None:intergenic 35.0%
GCAAGTGTCTGGAAAATTTA+TGG - chr1_1:38826740-38826759 Msa0021550:intron 35.0%
ATATACAACAAGTGCCCATT+TGG - chr1_1:38826807-38826826 Msa0021550:intron 35.0%
GGGTTAATGATGTTCCAAAT+GGG + chr1_1:38826649-38826668 None:intergenic 35.0%
! AATTTTCCAGACACTTGCAT+GGG + chr1_1:38826738-38826757 None:intergenic 35.0%
! AAATTTTCCAGACACTTGCA+TGG + chr1_1:38826739-38826758 None:intergenic 35.0%
GCAAGTGTCTGGAAAATTTA+TGG - chr1_1:38826740-38826759 Msa0021550:intron 35.0%
! GAATTGTCTGTACCTTTTGA+TGG - chr1_1:38827089-38827108 Msa0021550:intron 35.0%
AAAGTTGGAGGAATAGTTTG+TGG - chr1_1:38827292-38827311 Msa0021550:intron 35.0%
! CAAGTAAAGAAGGAGGTATA+GGG - chr1_1:38827511-38827530 Msa0021550:intron 35.0%
!! GTGTTGGTACTGTATCATTT+TGG - chr1_1:38827588-38827607 Msa0021550:intron 35.0%
! GTTGGTACTGTATCATTTTG+GGG - chr1_1:38827590-38827609 Msa0021550:intron 35.0%
!! TTTTGTTGTGTTTCTGTAGG+TGG - chr1_1:38827659-38827678 Msa0021550:intron 35.0%
TTGTTGTGTCAGTGTTTGTT+TGG + chr1_1:38828221-38828240 None:intergenic 35.0%
ACACAACAATTTCCTTATGC+AGG - chr1_1:38828232-38828251 Msa0021550:CDS 35.0%
TCACTTAAGAATGAGGGATA+TGG + chr1_1:38828266-38828285 None:intergenic 35.0%
! TTATGGAGGTGATGATGATT+AGG - chr1_1:38828448-38828467 Msa0021550:intron 35.0%
ATACTCTGTTGTAATGGCGT+TGG - chr1_1:38810232-38810251 Msa0021550:CDS 40.0%
! TGTTGTAATGGCGTTGGATA+AGG - chr1_1:38810238-38810257 Msa0021550:CDS 40.0%
GAGAGGAGAATGAATTACCT+CGG + chr1_1:38810339-38810358 None:intergenic 40.0%
ATTCTTGACGTTGACGAGTT+TGG + chr1_1:38810499-38810518 None:intergenic 40.0%
TTCAAGAATGAGAGGCTCAT+AGG + chr1_1:38810553-38810572 None:intergenic 40.0%
TTGGCTTCTTCAAGAATGAG+AGG + chr1_1:38810561-38810580 None:intergenic 40.0%
GCCAAATCACAAATCATTCG+TGG - chr1_1:38810576-38810595 Msa0021550:intron 40.0%
! GCCACGAATGATTTGTGATT+TGG + chr1_1:38810580-38810599 None:intergenic 40.0%
ATTCGTGGCGATAAAGATGA+AGG - chr1_1:38810591-38810610 Msa0021550:intron 40.0%
!! TATATGTGTCGGTGTCATGT+CGG - chr1_1:38810723-38810742 Msa0021550:intron 40.0%
TATTAGGTGTGTCCCGATAT+AGG + chr1_1:38810762-38810781 None:intergenic 40.0%
GTACAGATACTCCTCGTATT+AGG + chr1_1:38810778-38810797 None:intergenic 40.0%
CCACTCAATGATATAGTGCT+TGG + chr1_1:38810926-38810945 None:intergenic 40.0%
CCAAGCACTATATCATTGAG+TGG - chr1_1:38810923-38810942 Msa0021550:CDS 40.0%
TGAATTCCGACACAGAATAG+TGG + chr1_1:38811183-38811202 None:intergenic 40.0%
ACTATTCTGTGTCGGAATTC+AGG - chr1_1:38811182-38811201 Msa0021550:intron 40.0%
CTATTCTGTGTCGGAATTCA+GGG - chr1_1:38811183-38811202 Msa0021550:intron 40.0%
TCGGCGAGATTTCAAAATTC+TGG - chr1_1:38811245-38811264 Msa0021550:intron 40.0%
ATCAGTCATGATGCGCATAT+CGG - chr1_1:38811271-38811290 Msa0021550:intron 40.0%
ACTTCCGATTCTACTAAGAC+AGG + chr1_1:38811397-38811416 None:intergenic 40.0%
AGAATCGGAAGTAGAGTTTG+TGG - chr1_1:38811405-38811424 Msa0021550:intron 40.0%
TGCCTCACTATCTGAAAATG+AGG - chr1_1:38811468-38811487 Msa0021550:intron 40.0%
!! GGCATAAGTTTTGTGAGACT+CGG + chr1_1:38811885-38811904 None:intergenic 40.0%
AGTCTCACAAAACTTATGCC+AGG - chr1_1:38811885-38811904 Msa0021550:intron 40.0%
GTCTCACAAAACTTATGCCA+GGG - chr1_1:38811886-38811905 Msa0021550:intron 40.0%
TCTCACAAAACTTATGCCAG+GGG - chr1_1:38811887-38811906 Msa0021550:intron 40.0%
ACTTATTTGAGCTTATCCCC+TGG + chr1_1:38811906-38811925 None:intergenic 40.0%
!! TCCCAGTATTGAGTATTGAC+AGG + chr1_1:38812428-38812447 None:intergenic 40.0%
TACTACGCATGCATTTGCTT+TGG - chr1_1:38812464-38812483 Msa0021550:CDS 40.0%
TCGAGTTAGACTCTATCTAC+CGG - chr1_1:38812524-38812543 Msa0021550:CDS 40.0%
CGGGAGATAATGTGAAATCA+AGG - chr1_1:38812544-38812563 Msa0021550:CDS 40.0%
AATGCGATCTCATATAAGCG+TGG - chr1_1:38812575-38812594 Msa0021550:intron 40.0%
GATCTCATATAAGCGTGGAA+GGG - chr1_1:38812580-38812599 Msa0021550:intron 40.0%
TCCTCTGTCAACTGTGAATT+TGG - chr1_1:38812728-38812747 Msa0021550:intron 40.0%
TCCAAATTCACAGTTGACAG+AGG + chr1_1:38812732-38812751 None:intergenic 40.0%
TCCATTGACAATATGTGCAC+TGG - chr1_1:38813102-38813121 Msa0021550:intron 40.0%
ACCAGTGCACATATTGTCAA+TGG + chr1_1:38813106-38813125 None:intergenic 40.0%
! TATGTGGTGTGCTCTAAACT+AGG - chr1_1:38813224-38813243 Msa0021550:intron 40.0%
! GTGCTCTAAACTAGGAAATG+TGG - chr1_1:38813232-38813251 Msa0021550:intron 40.0%
CAAAAAGTTTGGGCAGAAAG+AGG + chr1_1:38813261-38813280 None:intergenic 40.0%
AGGACGGGTACAAAAAGTTT+GGG + chr1_1:38813271-38813290 None:intergenic 40.0%
AAGGACGGGTACAAAAAGTT+TGG + chr1_1:38813272-38813291 None:intergenic 40.0%
TTTCGGGGAAAATAAAGGAC+GGG + chr1_1:38813286-38813305 None:intergenic 40.0%
TGGGAGAAATGTGATAGACA+AGG - chr1_1:38813440-38813459 Msa0021550:intron 40.0%
GGGAGAAATGTGATAGACAA+GGG - chr1_1:38813441-38813460 Msa0021550:intron 40.0%
TGTGTGTCTTCTTAGGTTAG+CGG + chr1_1:38813490-38813509 None:intergenic 40.0%
!! GGTTTTGTAAGTTGTTACCC+AGG + chr1_1:38813554-38813573 None:intergenic 40.0%
TAGGAAAGGCAATAACTGTG+CGG + chr1_1:38813756-38813775 None:intergenic 40.0%
AATCTTGTTCCTTGGAGACT+CGG + chr1_1:38813841-38813860 None:intergenic 40.0%
AGTCTCCAAGGAACAAGATT+AGG - chr1_1:38813841-38813860 Msa0021550:intron 40.0%
AAAACTGATGGAGCTGCTAA+AGG + chr1_1:38813948-38813967 None:intergenic 40.0%
ACTTTGATCCAATGACAAGG+AGG - chr1_1:38813969-38813988 Msa0021550:CDS 40.0%
ACAATACCTTCAATGATGCG+AGG - chr1_1:38813998-38814017 Msa0021550:intron 40.0%
CAATACCTTCAATGATGCGA+GGG - chr1_1:38813999-38814018 Msa0021550:intron 40.0%
! TTTAAGGCTGTTGGTGTTTC+TGG + chr1_1:38814040-38814059 None:intergenic 40.0%
TTGGACAAAAAGTCGCAAAG+CGG + chr1_1:38814087-38814106 None:intergenic 40.0%
TTGCAGTCAAGGCTACAAAT+AGG - chr1_1:38814398-38814417 Msa0021550:intron 40.0%
TGCAGTCAAGGCTACAAATA+GGG - chr1_1:38814399-38814418 Msa0021550:intron 40.0%
CAATAGCAGAAACCAGCATT+AGG - chr1_1:38814585-38814604 Msa0021550:intron 40.0%
GCTTGGTTAAATTGTGGTGA+AGG + chr1_1:38814735-38814754 None:intergenic 40.0%
TTACAGTAATTGAGCAGGTC+AGG + chr1_1:38814757-38814776 None:intergenic 40.0%
! AGAGGCTATAGTGAACCTTT+TGG - chr1_1:38814882-38814901 Msa0021550:intron 40.0%
AGCTACGGCCTATTTCATAA+TGG + chr1_1:38815000-38815019 None:intergenic 40.0%
CATCTGCTATAACATCGAGT+TGG + chr1_1:38815140-38815159 None:intergenic 40.0%
AGACAAGTACAATGCTGATC+AGG + chr1_1:38815188-38815207 None:intergenic 40.0%
TGGCAGCAAAATAGTCTAGA+GGG - chr1_1:38815275-38815294 Msa0021550:CDS 40.0%
GATAAGCAATCTCCCATTCA+AGG - chr1_1:38815616-38815635 Msa0021550:intron 40.0%
! AATGCTGTTGGAGAGGATTT+TGG - chr1_1:38815650-38815669 Msa0021550:intron 40.0%
!!! AGGATTTTGGTTCTGAAGGA+TGG - chr1_1:38815663-38815682 Msa0021550:intron 40.0%
! ACCACCACAACAAACTTTTC+CGG - chr1_1:38815966-38815985 Msa0021550:intron 40.0%
! GTGGTTGTTGTGGTTAGTTA+GGG + chr1_1:38815995-38816014 None:intergenic 40.0%
! TGTGGTTGTTGTGGTTAGTT+AGG + chr1_1:38815996-38816015 None:intergenic 40.0%
! ACCGCCGGAAAAATCATTTT+CGG - chr1_1:38816123-38816142 Msa0021550:intron 40.0%
! TCCGAAAATGATTTTTCCGG+CGG + chr1_1:38816127-38816146 None:intergenic 40.0%
!!! GAGTTTTTTCTTTCCCCTTG+TGG + chr1_1:38816217-38816236 None:intergenic 40.0%
AAGGGGAAAGAAAAAACTCG+CGG - chr1_1:38816218-38816237 Msa0021550:intron 40.0%
AAAAAAAAATTCCGACGCGG+TGG - chr1_1:38816467-38816486 Msa0021550:intron 40.0%
ATCCAGGATCCATTTACCTT+GGG - chr1_1:38816762-38816781 Msa0021550:CDS 40.0%
AGTTACTAACAATGACACGG+AGG + chr1_1:38817076-38817095 None:intergenic 40.0%
CTTGCACTTGTCACTGTTAA+AGG - chr1_1:38817346-38817365 Msa0021550:intron 40.0%
! CAGACAGCGTCTTTTAATGT+TGG + chr1_1:38817395-38817414 None:intergenic 40.0%
! CAGAGGGATAGTTGATCTTT+TGG - chr1_1:38817608-38817627 Msa0021550:intron 40.0%
!! TTTATTTTCCTGTTGCAGGC+TGG - chr1_1:38817758-38817777 Msa0021550:intron 40.0%
AGAATTTCACTGCAGAAGCA+AGG + chr1_1:38817828-38817847 None:intergenic 40.0%
!!! CAACCATTTCCCCGTTTTTT+TGG - chr1_1:38817985-38818004 Msa0021550:intron 40.0%
!!! ACCATTTCCCCGTTTTTTTG+GGG - chr1_1:38817987-38818006 Msa0021550:intron 40.0%
!! AGCGTTCTAAGAAACATGAC+TGG - chr1_1:38818111-38818130 Msa0021550:intron 40.0%
! AGATTGGTTGGTCCATGATT+TGG - chr1_1:38818140-38818159 Msa0021550:intron 40.0%
GAACATCATAACCTATGCTC+TGG + chr1_1:38818269-38818288 None:intergenic 40.0%
AGTACTCAGAATCCCAAGTA+TGG + chr1_1:38818476-38818495 None:intergenic 40.0%
! TTCTCCTCAATTGGTAACTG+TGG + chr1_1:38818803-38818822 None:intergenic 40.0%
!!! TGGATTTTGGTTTTCTCCTG+TGG - chr1_1:38818881-38818900 Msa0021550:intron 40.0%
!! TTCTCCTGTGGCTCTAATTT+CGG - chr1_1:38818893-38818912 Msa0021550:intron 40.0%
! TGCTCCTCTCTTTTCATTCT+TGG - chr1_1:38818989-38819008 Msa0021550:intron 40.0%
ACATTGCATCACATGAAGCT+TGG - chr1_1:38819216-38819235 Msa0021550:intron 40.0%
!! AAAGCTGAGGGCATGATTTT+CGG - chr1_1:38819249-38819268 Msa0021550:intron 40.0%
! CAAAGTGTACATGAAGTGCT+CGG + chr1_1:38819469-38819488 None:intergenic 40.0%
ACATGGATTCCATAAGACAC+AGG + chr1_1:38820042-38820061 None:intergenic 40.0%
! CGCACTGATAAAGTTGATTC+TGG - chr1_1:38820147-38820166 Msa0021550:intron 40.0%
! TCTTTTGCAGACGTAGACAT+TGG - chr1_1:38820554-38820573 Msa0021550:intron 40.0%
ATTGGAGATTAGCATCTCCA+TGG - chr1_1:38820572-38820591 Msa0021550:intron 40.0%
TTAGCATCTCCATGGTTACA+TGG - chr1_1:38820580-38820599 Msa0021550:intron 40.0%
GTTACATGGCATCAATCCAA+GGG - chr1_1:38820594-38820613 Msa0021550:intron 40.0%
GATAGTCTGATGCCAAAAGA+TGG - chr1_1:38820616-38820635 Msa0021550:intron 40.0%
! AAACCATCATCGCCATCTTT+TGG + chr1_1:38820631-38820650 None:intergenic 40.0%
!!! GATGGTTTTTTCCCAACTAC+TGG - chr1_1:38820643-38820662 Msa0021550:intron 40.0%
ATCAAGGGCAGAATTTGAAG+GGG + chr1_1:38820809-38820828 None:intergenic 40.0%
CATCAAGGGCAGAATTTGAA+GGG + chr1_1:38820810-38820829 None:intergenic 40.0%
TCATCAAGGGCAGAATTTGA+AGG + chr1_1:38820811-38820830 None:intergenic 40.0%
CTTTCACCATTGTTCAACAG+TGG - chr1_1:38821215-38821234 Msa0021550:intron 40.0%
ACAGTGGCTGAACTTAAACA+AGG - chr1_1:38821231-38821250 Msa0021550:intron 40.0%
! TCTCTATTTGTTGCCAGTGA+TGG - chr1_1:38821458-38821477 Msa0021550:intron 40.0%
CCAGTGATGGCATTATTCTT+GGG - chr1_1:38821471-38821490 Msa0021550:intron 40.0%
TGATGGCATTATTCTTGGGT+GGG - chr1_1:38821475-38821494 Msa0021550:intron 40.0%
TTAGGATGTTATTGCCAACC+AGG - chr1_1:38821527-38821546 Msa0021550:intron 40.0%
CTTATTGCCCGAAAATTGTG+AGG - chr1_1:38821730-38821749 Msa0021550:intron 40.0%
! AGACCAACCCTCACAATTTT+CGG + chr1_1:38821741-38821760 None:intergenic 40.0%
CAAAGCACACCATTCTATCA+AGG - chr1_1:38821761-38821780 Msa0021550:intron 40.0%
! AGTTAAGCTTGCTTCATGAG+TGG + chr1_1:38821927-38821946 None:intergenic 40.0%
TAACTGTCCAGGTAAATGTG+TGG - chr1_1:38822241-38822260 Msa0021550:intron 40.0%
TTAAAAAACCCCTCAGGAAC+AGG - chr1_1:38822416-38822435 Msa0021550:intron 40.0%
ATGAGGAACGAGTTGTATCA+AGG - chr1_1:38822444-38822463 Msa0021550:intron 40.0%
! CACTGCTTTGCTACAGTTTT+GGG + chr1_1:38822491-38822510 None:intergenic 40.0%
! GGAATCTACAATTTGGGATG+AGG - chr1_1:38822565-38822584 Msa0021550:intron 40.0%
ACGGAGGTTTCAGTTGAATA+CGG - chr1_1:38822603-38822622 Msa0021550:intron 40.0%
!! AACGATTTTTGGGAGAGAGA+AGG - chr1_1:38822626-38822645 Msa0021550:intron 40.0%
! TTCTATCCTGACTATTGGCT+GGG + chr1_1:38822719-38822738 None:intergenic 40.0%
TTTCTATCCTGACTATTGGC+TGG + chr1_1:38822720-38822739 None:intergenic 40.0%
AGAAAATACAAAGGTCCGTC+AGG - chr1_1:38822735-38822754 Msa0021550:intron 40.0%
CCAACTATTCAATGTGTCCA+AGG + chr1_1:38822878-38822897 None:intergenic 40.0%
CCTTGGACACATTGAATAGT+TGG - chr1_1:38822875-38822894 Msa0021550:CDS 40.0%
!! TGCGTGTTTGGATTTGCTTT+TGG - chr1_1:38823014-38823033 Msa0021550:intron 40.0%
GGGATTAACAAATGTCATCC+GGG - chr1_1:38823157-38823176 Msa0021550:intron 40.0%
GGATTAACAAATGTCATCCG+GGG - chr1_1:38823158-38823177 Msa0021550:intron 40.0%
AGTGCCAACATATCATCTAC+TGG - chr1_1:38823228-38823247 Msa0021550:intron 40.0%
AAGCAGAATAATGCTTCTGC+AGG - chr1_1:38823252-38823271 Msa0021550:intron 40.0%
! CATTTGAAGCACTAAAGCTG+AGG + chr1_1:38823423-38823442 None:intergenic 40.0%
TTTCACTCTTACAGCTTGTG+CGG + chr1_1:38823494-38823513 None:intergenic 40.0%
CAATTTGTGCAGGATTGTAG+TGG - chr1_1:38823643-38823662 Msa0021550:intron 40.0%
!! GGGATTGTAGTGGATATGAA+AGG - chr1_1:38823691-38823710 Msa0021550:intron 40.0%
ACTTCCAGCAACCGTAATTT+CGG - chr1_1:38824531-38824550 Msa0021550:intron 40.0%
TTTGAAAGACTGAAGCAAGC+TGG - chr1_1:38824691-38824710 Msa0021550:intron 40.0%
ACAATATCGAATGCATCCTG+AGG - chr1_1:38824738-38824757 Msa0021550:intron 40.0%
TAAACATAAGCACCAACCTC+AGG + chr1_1:38824757-38824776 None:intergenic 40.0%
GATACTAAGACCCTTGATAC+TGG - chr1_1:38824940-38824959 Msa0021550:intron 40.0%
!!! GCCCTTGAAACTTAGTTTTG+TGG + chr1_1:38825074-38825093 None:intergenic 40.0%
GTAACTCAAGAAGAGAGAAG+GGG + chr1_1:38825120-38825139 None:intergenic 40.0%
CAGTAACTCAAGAAGAGAGA+AGG + chr1_1:38825122-38825141 None:intergenic 40.0%
AAATTTGGAGAGTGGCAGAT+GGG + chr1_1:38825402-38825421 None:intergenic 40.0%
AAAATTTGGAGAGTGGCAGA+TGG + chr1_1:38825403-38825422 None:intergenic 40.0%
CTTCTACTGCGACGAAAATT+TGG + chr1_1:38825417-38825436 None:intergenic 40.0%
CTAAACTCATCCGAAAAGGA+TGG + chr1_1:38825463-38825482 None:intergenic 40.0%
AGGATTCTACCAATCATGCT+AGG - chr1_1:38825753-38825772 Msa0021550:intron 40.0%
TACCAATCATGCTAGGATGT+GGG - chr1_1:38825760-38825779 Msa0021550:intron 40.0%
TCCCTCGTGTATATCAAAGA+AGG + chr1_1:38826065-38826084 None:intergenic 40.0%
GCAATTATAACACCCTACAG+TGG - chr1_1:38826205-38826224 Msa0021550:CDS 40.0%
AAGCCAACATAAGGCAACTA+GGG + chr1_1:38826471-38826490 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr1_1:38826581-38826600 Msa0021550:intron 40.0%
CGGGTTAATGATGTTCCAAA+TGG + chr1_1:38826650-38826669 None:intergenic 40.0%
GGGCAGTAATTGGCAAAAAT+GGG + chr1_1:38826999-38827018 None:intergenic 40.0%
ATGTTGGTGCAGAATGAACT+TGG + chr1_1:38827031-38827050 None:intergenic 40.0%
!!! TGTACCTTTTGATGGTGTGA+TGG - chr1_1:38827097-38827116 Msa0021550:intron 40.0%
! TTTTACATTGTTCCAGTGGG+CGG - chr1_1:38827225-38827244 Msa0021550:intron 40.0%
TGTGTCAGAGCAAGTAAAGA+AGG - chr1_1:38827501-38827520 Msa0021550:intron 40.0%
! GCAAGTAAAGAAGGAGGTAT+AGG - chr1_1:38827510-38827529 Msa0021550:intron 40.0%
ACATTCGACGAATGAACGTT+GGG - chr1_1:38827544-38827563 Msa0021550:intron 40.0%
AATGCATCACGTTACAGCTA+TGG + chr1_1:38827640-38827659 None:intergenic 40.0%
! TTGTGTTTCTGTAGGTGGTT+GGG - chr1_1:38827664-38827683 Msa0021550:intron 40.0%
!! TTGTGGAAAGTGCTGAGAAA+AGG - chr1_1:38827727-38827746 Msa0021550:intron 40.0%
!! TGTGGAAAGTGCTGAGAAAA+GGG - chr1_1:38827728-38827747 Msa0021550:intron 40.0%
AAAAACAGATGAACCACCTG+AGG - chr1_1:38828310-38828329 Msa0021550:intron 40.0%
AGTAAACAATGATGCGCGAA+TGG - chr1_1:38828352-38828371 Msa0021550:intron 40.0%
CAAGCTGATGACAACGATTA+TGG - chr1_1:38828404-38828423 Msa0021550:intron 40.0%
GATGACAACGATTATGGAGA+CGG - chr1_1:38828410-38828429 Msa0021550:intron 40.0%
ATGACAACGATTATGGAGAC+GGG - chr1_1:38828411-38828430 Msa0021550:intron 40.0%
! AAACCCTTTTGCTAAGTCGC+CGG - chr1_1:38809794-38809813 Msa0021550:three_prime_UTR 45.0%
GTCAGACTACCACAGCAAAA+TGG + chr1_1:38809863-38809882 None:intergenic 45.0%
! TTACGTTACTCTAGAAGCCG+AGG - chr1_1:38810319-38810338 Msa0021550:intron 45.0%
AATGTGAGAGAGAGAGAGAG+AGG + chr1_1:38810356-38810375 None:intergenic 45.0%
! CAACACTGGCTAGACTGTTT+GGG + chr1_1:38811133-38811152 None:intergenic 45.0%
! ACAACACTGGCTAGACTGTT+TGG + chr1_1:38811134-38811153 None:intergenic 45.0%
GCTGTACCACTATTCTGTGT+CGG - chr1_1:38811174-38811193 Msa0021550:intron 45.0%
!! AAACTGATGGCTCGGTCAAA+TGG - chr1_1:38811352-38811371 Msa0021550:intron 45.0%
!! AACTGATGGCTCGGTCAAAT+GGG - chr1_1:38811353-38811372 Msa0021550:intron 45.0%
!! ACAAATAGCGGATTGCGTAG+CGG + chr1_1:38811810-38811829 None:intergenic 45.0%
TACGCATGCATTTGCTTTGG+TGG - chr1_1:38812467-38812486 Msa0021550:CDS 45.0%
CGAGTTAGACTCTATCTACC+GGG - chr1_1:38812525-38812544 Msa0021550:CDS 45.0%
CGATCTCATATAAGCGTGGA+AGG - chr1_1:38812579-38812598 Msa0021550:intron 45.0%
! CAGGTGGTTCTACTATTCCA+AGG + chr1_1:38812952-38812971 None:intergenic 45.0%
CTCGGAGTTTGTAGCACTAA+AGG - chr1_1:38813010-38813029 Msa0021550:intron 45.0%
TTAGCGGTGCGAACATACTT+GGG + chr1_1:38813474-38813493 None:intergenic 45.0%
GCGGATAAATTGGCATCTGT+TGG + chr1_1:38813737-38813756 None:intergenic 45.0%
CCTCTCCTAATCTTGTTCCT+TGG + chr1_1:38813849-38813868 None:intergenic 45.0%
CCAAGGAACAAGATTAGGAG+AGG - chr1_1:38813846-38813865 Msa0021550:intron 45.0%
TTGATCCAATGACAAGGAGG+AGG - chr1_1:38813972-38813991 Msa0021550:CDS 45.0%
TAAGTCCCTCGCATCATTGA+AGG + chr1_1:38814007-38814026 None:intergenic 45.0%
AATGATGCGAGGGACTTAAC+TGG - chr1_1:38814009-38814028 Msa0021550:intron 45.0%
ATGATGCGAGGGACTTAACT+GGG - chr1_1:38814010-38814029 Msa0021550:intron 45.0%
!!! GGCAGTCTTTTTAAGGCTGT+TGG + chr1_1:38814049-38814068 None:intergenic 45.0%
AAGCGGTCTTCCTTTGATGA+AGG + chr1_1:38814070-38814089 None:intergenic 45.0%
TCTCAGATCGGCTATCAACA+TGG + chr1_1:38814138-38814157 None:intergenic 45.0%
! GGAGCTAGCTTGGATCTATT+TGG + chr1_1:38814322-38814341 None:intergenic 45.0%
! GCAGCTTTAGTGAGCAGATT+TGG + chr1_1:38814343-38814362 None:intergenic 45.0%
! TAGCCTTGACTGCAAACTAG+GGG + chr1_1:38814393-38814412 None:intergenic 45.0%
! GTAGCCTTGACTGCAAACTA+GGG + chr1_1:38814394-38814413 None:intergenic 45.0%
! TGTAGCCTTGACTGCAAACT+AGG + chr1_1:38814395-38814414 None:intergenic 45.0%
! TGTTTCAGGTGCTCATCTGT+AGG - chr1_1:38814440-38814459 Msa0021550:CDS 45.0%
ACATTCAATGGCTTACAGCG+AGG + chr1_1:38814637-38814656 None:intergenic 45.0%
! GGTCAGGCTTGGTTAAATTG+TGG + chr1_1:38814741-38814760 None:intergenic 45.0%
AAATAGGCCGTAGCTTCATG+AGG - chr1_1:38815005-38815024 Msa0021550:intron 45.0%
AGTTGTGTTGCGTAGCATAG+CGG - chr1_1:38815044-38815063 Msa0021550:CDS 45.0%
GTACTTGTCTAACGCAAGCT+TGG - chr1_1:38815198-38815217 Msa0021550:CDS 45.0%
TGGAGAGGCTAATGAGATGA+TGG - chr1_1:38815218-38815237 Msa0021550:CDS 45.0%
AACATCATCCGTTATGCGAG+TGG - chr1_1:38815243-38815262 Msa0021550:CDS 45.0%
ACATCATCCGTTATGCGAGT+GGG - chr1_1:38815244-38815263 Msa0021550:CDS 45.0%
! GACTATTTTGCTGCCACTGT+CGG + chr1_1:38815271-38815290 None:intergenic 45.0%
GTGGCAGCAAAATAGTCTAG+AGG - chr1_1:38815274-38815293 Msa0021550:CDS 45.0%
TACCATTGCTCGTGAGTATG+TGG - chr1_1:38815583-38815602 Msa0021550:intron 45.0%
!!! GGAGAGGATTTTGGTTCTGA+AGG - chr1_1:38815659-38815678 Msa0021550:intron 45.0%
GTTATGGCCTCACGTTGATA+TGG + chr1_1:38815734-38815753 None:intergenic 45.0%
!! GTTTGTTGTGGTGGTTAGAG+TGG + chr1_1:38815961-38815980 None:intergenic 45.0%
! GTTGTTGTGGTTAGTTAGGG+TGG + chr1_1:38815992-38816011 None:intergenic 45.0%
TGTTCATCACTATTCACCGC+CGG - chr1_1:38816108-38816127 Msa0021550:intron 45.0%
GGAAAGAAAAAACTCGCGGT+CGG - chr1_1:38816222-38816241 Msa0021550:intron 45.0%
TCCTTACCTCAAGTCGAATC+CGG + chr1_1:38816280-38816299 None:intergenic 45.0%
TAGGTGTAAACGAACCGGTT+CGG - chr1_1:38816641-38816660 Msa0021550:intron 45.0%
GATCCAGGATCCATTTACCT+TGG - chr1_1:38816761-38816780 Msa0021550:CDS 45.0%
AAATGAGCCGACCTAGTTGA+TGG - chr1_1:38817585-38817604 Msa0021550:intron 45.0%
ATAATAGACCAGCCTGCAAC+AGG + chr1_1:38817769-38817788 None:intergenic 45.0%
!!! CCATTTCCCCGTTTTTTTGG+GGG - chr1_1:38817988-38818007 Msa0021550:intron 45.0%
! ACATGACTGGCCAGTTAGAT+TGG - chr1_1:38818124-38818143 Msa0021550:intron 45.0%
CATGGACCAACCAATCTAAC+TGG + chr1_1:38818137-38818156 None:intergenic 45.0%
AAAGCTTGCGCAACAGTTGA+TGG - chr1_1:38818219-38818238 Msa0021550:intron 45.0%
AAGCTTGCGCAACAGTTGAT+GGG - chr1_1:38818220-38818239 Msa0021550:intron 45.0%
CATCATAACCTATGCTCTGG+TGG + chr1_1:38818266-38818285 None:intergenic 45.0%
GGAAGACTCAGACCATACTT+GGG - chr1_1:38818461-38818480 Msa0021550:intron 45.0%
CGAGCACTTCATGTACACTT+TGG - chr1_1:38819467-38819486 Msa0021550:intron 45.0%
! CAAAGTGTCCATGAAGTGCT+CGG + chr1_1:38819598-38819617 None:intergenic 45.0%
!! AGAGGGAGCCATTTTGCATA+AGG + chr1_1:38820193-38820212 None:intergenic 45.0%
AATGGCTCCCTCTTTCATCT+TGG - chr1_1:38820200-38820219 Msa0021550:intron 45.0%
GGATTGATGCCATGTAACCA+TGG + chr1_1:38820592-38820611 None:intergenic 45.0%
GGTTACATGGCATCAATCCA+AGG - chr1_1:38820593-38820612 Msa0021550:intron 45.0%
TTTGGCATCAGACTATCCCT+TGG + chr1_1:38820613-38820632 None:intergenic 45.0%
ATGCCAAAAGATGGCGATGA+TGG - chr1_1:38820625-38820644 Msa0021550:intron 45.0%
! CGAGTTGAAGTTACAGCTTC+AGG + chr1_1:38820757-38820776 None:intergenic 45.0%
TGTTCTTAGCTGAGTACAGC+TGG - chr1_1:38821059-38821078 Msa0021550:intron 45.0%
GTTCAGCCACTGTTGAACAA+TGG + chr1_1:38821224-38821243 None:intergenic 45.0%
GCCAGTGATGGCATTATTCT+TGG - chr1_1:38821470-38821489 Msa0021550:intron 45.0%
CCCAAGAATAATGCCATCAC+TGG + chr1_1:38821474-38821493 None:intergenic 45.0%
GTGATGGCATTATTCTTGGG+TGG - chr1_1:38821474-38821493 Msa0021550:intron 45.0%
GATGGCATTATTCTTGGGTG+GGG - chr1_1:38821476-38821495 Msa0021550:intron 45.0%
ATGGCATTATTCTTGGGTGG+GGG - chr1_1:38821477-38821496 Msa0021550:intron 45.0%
TATTCTTGGGTGGGGGTTAA+AGG - chr1_1:38821484-38821503 Msa0021550:intron 45.0%
TGGGGGTTAAAGGTTTACCT+GGG - chr1_1:38821494-38821513 Msa0021550:intron 45.0%
TACCTGGGATACCCGTTATT+AGG - chr1_1:38821509-38821528 Msa0021550:intron 45.0%
!! ATCCTAATAACGGGTATCCC+AGG + chr1_1:38821514-38821533 None:intergenic 45.0%
! GACCAACCCTCACAATTTTC+GGG + chr1_1:38821740-38821759 None:intergenic 45.0%
GGGTAACAGCCTTGATAGAA+TGG + chr1_1:38821773-38821792 None:intergenic 45.0%
GAATAAGGGCCCGTTTGAAT+TGG + chr1_1:38822194-38822213 None:intergenic 45.0%
ATGCATGCCACACATTTACC+TGG + chr1_1:38822251-38822270 None:intergenic 45.0%
TGTGTGGCATGCATCTTTGA+AGG - chr1_1:38822257-38822276 Msa0021550:intron 45.0%
! CCACTGCTTTGCTACAGTTT+TGG + chr1_1:38822492-38822511 None:intergenic 45.0%
CCAAAACTGTAGCAAAGCAG+TGG - chr1_1:38822489-38822508 Msa0021550:intron 45.0%
TTCTAACCCAGCCAATAGTC+AGG - chr1_1:38822710-38822729 Msa0021550:intron 45.0%
ATACAAAGGTCCGTCAGGAT+AGG - chr1_1:38822740-38822759 Msa0021550:intron 45.0%
TCCTTATCCTGGCCATCAAA+CGG - chr1_1:38822850-38822869 Msa0021550:CDS 45.0%
! CACTATCCGAGCTGCAATTT+TGG - chr1_1:38823287-38823306 Msa0021550:intron 45.0%
CCTCATCCAAAATTGCAGCT+CGG + chr1_1:38823296-38823315 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+GGG + chr1_1:38823835-38823854 None:intergenic 45.0%
ATGTCCGAAATTACGGTTGC+TGG + chr1_1:38824538-38824557 None:intergenic 45.0%
TATCGAATGCATCCTGAGGT+TGG - chr1_1:38824742-38824761 Msa0021550:intron 45.0%
CTTGAGTTACTGCCCTGATT+TGG - chr1_1:38825130-38825149 Msa0021550:intron 45.0%
TTCAAGATGGTATCAGGGCT+TGG - chr1_1:38825305-38825324 Msa0021550:intron 45.0%
TGCGACGAAAATTTGGAGAG+TGG + chr1_1:38825410-38825429 None:intergenic 45.0%
ATGATGCTTAGTCAGGACAC+TGG - chr1_1:38825531-38825550 Msa0021550:intron 45.0%
CTTAGTCAGGACACTGGTAA+AGG - chr1_1:38825537-38825556 Msa0021550:intron 45.0%
GGACACTGGTAAAGGCAAAT+AGG - chr1_1:38825545-38825564 Msa0021550:intron 45.0%
CACTGGTAAAGGCAAATAGG+AGG - chr1_1:38825548-38825567 Msa0021550:intron 45.0%
CTTCACATCCAGAGTTCGTT+GGG - chr1_1:38825640-38825659 Msa0021550:intron 45.0%
GGAAAATACCCAACGAACTC+TGG + chr1_1:38825651-38825670 None:intergenic 45.0%
! GTTCGTTGGGTATTTTCCCT+TGG - chr1_1:38825653-38825672 Msa0021550:intron 45.0%
CTACCAATCATGCTAGGATG+TGG - chr1_1:38825759-38825778 Msa0021550:intron 45.0%
GATAAGAAGCTTTCCCTCGA+TGG - chr1_1:38825949-38825968 Msa0021550:CDS 45.0%
AATTCCTTGGAAGATGGGGA+GGG - chr1_1:38825983-38826002 Msa0021550:CDS 45.0%
AGACAGAACGTGATTGGCAT+AGG - chr1_1:38826017-38826036 Msa0021550:CDS 45.0%
GAAACTAAGCCATTTGGGAG+TGG - chr1_1:38826088-38826107 Msa0021550:intron 45.0%
! TGGTTTCCTGACTTGAGTGT+GGG + chr1_1:38826181-38826200 None:intergenic 45.0%
! TTGGTTTCCTGACTTGAGTG+TGG + chr1_1:38826182-38826201 None:intergenic 45.0%
!! AGGTTGACTTGTCCACTGTA+GGG + chr1_1:38826220-38826239 None:intergenic 45.0%
CGTGTCAGCAGAGAAATTAG+TGG - chr1_1:38826270-38826289 Msa0021550:CDS 45.0%
! ATGTACCATTGATGGTTGCC+AGG - chr1_1:38826297-38826316 Msa0021550:CDS 45.0%
GTTTACCTGGCAACCATCAA+TGG + chr1_1:38826305-38826324 None:intergenic 45.0%
AGCCAACATAAGGCAACTAG+GGG + chr1_1:38826470-38826489 None:intergenic 45.0%
CAAGCCAACATAAGGCAACT+AGG + chr1_1:38826472-38826491 None:intergenic 45.0%
CTCAGAGACAAGCCAACATA+AGG + chr1_1:38826480-38826499 None:intergenic 45.0%
!! TATGTTGGCTTGTCTCTGAG+AGG - chr1_1:38826480-38826499 Msa0021550:intron 45.0%
!! ATGTTGGCTTGTCTCTGAGA+GGG - chr1_1:38826481-38826500 Msa0021550:intron 45.0%
AGCTTCCTATCTAACCGATG+CGG + chr1_1:38826518-38826537 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_1:38826574-38826593 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_1:38826571-38826590 Msa0021550:intron 45.0%
GGGGCAGTAATTGGCAAAAA+TGG + chr1_1:38827000-38827019 None:intergenic 45.0%
! AGAATGAACTTGGTGACCTG+GGG + chr1_1:38827021-38827040 None:intergenic 45.0%
! CAGAATGAACTTGGTGACCT+GGG + chr1_1:38827022-38827041 None:intergenic 45.0%
!!! ACCTTTTGATGGTGTGATGG+AGG - chr1_1:38827100-38827119 Msa0021550:intron 45.0%
TCCTCCATCACACCATCAAA+AGG + chr1_1:38827104-38827123 None:intergenic 45.0%
!!! TCTTTTTCAGGGGCGTGAAA+AGG - chr1_1:38827461-38827480 Msa0021550:intron 45.0%
GTCAGAGCAAGTAAAGAAGG+AGG - chr1_1:38827504-38827523 Msa0021550:intron 45.0%
! AGAAGGAGGTATAGGGTTTG+TGG - chr1_1:38827518-38827537 Msa0021550:intron 45.0%
GACATTCGACGAATGAACGT+TGG - chr1_1:38827543-38827562 Msa0021550:intron 45.0%
! GTTGTGTTTCTGTAGGTGGT+TGG - chr1_1:38827663-38827682 Msa0021550:intron 45.0%
TACGTTCCTCCTCAATGTTG+AGG + chr1_1:38827694-38827713 None:intergenic 45.0%
CATTGAGGAGGAACGTACAA+TGG - chr1_1:38827697-38827716 Msa0021550:intron 45.0%
CGTACAATGGAACAAGCTTG+TGG - chr1_1:38827710-38827729 Msa0021550:intron 45.0%
ATGGTTTAGACGCCTGCATA+AGG + chr1_1:38828247-38828266 None:intergenic 45.0%
TGACAACGATTATGGAGACG+GGG - chr1_1:38828412-38828431 Msa0021550:intron 45.0%
!!! GTTTTTATTTTTTTTTATAT+TGG - chr1_1:38812152-38812171 Msa0021550:intron 5.0%
!!! TTTTATTTTATTTACTTTTT+AGG - chr1_1:38818750-38818769 Msa0021550:intron 5.0%
!!! TTCATTTTAATAATAATTAA+TGG + chr1_1:38823762-38823781 None:intergenic 5.0%
!! ATTAATTATTATTAAAATGA+AGG - chr1_1:38823761-38823780 Msa0021550:intron 5.0%
!! TTAATTATTATTAAAATGAA+GGG - chr1_1:38823762-38823781 Msa0021550:intron 5.0%
!! TTATCTAAAAAAAATTATAA+AGG + chr1_1:38825808-38825827 None:intergenic 5.0%
!!! AATTTAAGATTAAAATTTAT+TGG + chr1_1:38828165-38828184 None:intergenic 5.0%
GACTTAACCGAAACTGCCAC+CGG + chr1_1:38809836-38809855 None:intergenic 50.0%
!! AAGTCGTCGCCATTTTGCTG+TGG - chr1_1:38809851-38809870 Msa0021550:three_prime_UTR 50.0%
ACCTGAAAATGGAGTGTGCG+CGG + chr1_1:38809924-38809943 None:intergenic 50.0%
ATCGGGACACACCTAATACG+AGG - chr1_1:38810764-38810783 Msa0021550:CDS 50.0%
!! GTGGTACAGCACCGATATAC+TGG + chr1_1:38811164-38811183 None:intergenic 50.0%
!! CAAATAGCGGATTGCGTAGC+GGG + chr1_1:38811809-38811828 None:intergenic 50.0%
CAGGGGCTGAATGGAAGTTA+GGG - chr1_1:38812181-38812200 Msa0021550:intron 50.0%
AGGGGCTGAATGGAAGTTAG+GGG - chr1_1:38812182-38812201 Msa0021550:intron 50.0%
!! TCAGGCTTGTTGTCGCGATT+CGG + chr1_1:38812213-38812232 None:intergenic 50.0%
!! GGCTTGTTGTGACTCTGTTC+AGG + chr1_1:38812231-38812250 None:intergenic 50.0%
AGGCACTATGTAGGTCTCCT+TGG - chr1_1:38812932-38812951 Msa0021550:intron 50.0%
GTTAGCGGTGCGAACATACT+TGG + chr1_1:38813475-38813494 None:intergenic 50.0%
CTTGGAGACTCGGATCCAAA+TGG + chr1_1:38813831-38813850 None:intergenic 50.0%
CATTTGGATCCGAGTCTCCA+AGG - chr1_1:38813829-38813848 Msa0021550:intron 50.0%
AAAGGAACTCCCTATCGTGC+TGG + chr1_1:38813930-38813949 None:intergenic 50.0%
GTGTTCCTCCTCCTTGTCAT+TGG + chr1_1:38813980-38813999 None:intergenic 50.0%
! GAGCAGATTTGGAGCTAGCT+TGG + chr1_1:38814332-38814351 None:intergenic 50.0%
! TCTCCCCTAGTTTGCAGTCA+AGG - chr1_1:38814387-38814406 Msa0021550:intron 50.0%
GAAACACAGTGGATGCACTG+TGG + chr1_1:38814426-38814445 None:intergenic 50.0%
CAGTGCATCCACTGTGTTTC+AGG - chr1_1:38814426-38814445 Msa0021550:CDS 50.0%
GATGAGCACCTGAAACACAG+TGG + chr1_1:38814437-38814456 None:intergenic 50.0%
AGAAACCAGCATTAGGCCAG+AGG - chr1_1:38814592-38814611 Msa0021550:intron 50.0%
CTTCAGTTCATGCACACCTC+TGG + chr1_1:38814611-38814630 None:intergenic 50.0%
! CAGAGGTGTGCATGAACTGA+AGG - chr1_1:38814609-38814628 Msa0021550:intron 50.0%
GTAATTGAGCAGGTCAGGCT+TGG + chr1_1:38814752-38814771 None:intergenic 50.0%
TGTCTAACGCAAGCTTGGAG+AGG - chr1_1:38815203-38815222 Msa0021550:CDS 50.0%
AGCCACATACTCACGAGCAA+TGG + chr1_1:38815588-38815607 None:intergenic 50.0%
TGGTGGTTAGAGTGGTGGTT+TGG + chr1_1:38815953-38815972 None:intergenic 50.0%
TGTTGTGGTGGTTAGAGTGG+TGG + chr1_1:38815958-38815977 None:intergenic 50.0%
!! GCCGGAAAAGTTTGTTGTGG+TGG + chr1_1:38815970-38815989 None:intergenic 50.0%
!! GTGGCCGGAAAAGTTTGTTG+TGG + chr1_1:38815973-38815992 None:intergenic 50.0%
! TTGTGGTTAGTTAGGGTGGC+CGG + chr1_1:38815988-38816007 None:intergenic 50.0%
! CACAAGTGCAAGGCCGATTT+CGG - chr1_1:38816159-38816178 Msa0021550:intron 50.0%
CTTCTTGTGGTGGCCGAAAT+CGG + chr1_1:38816175-38816194 None:intergenic 50.0%
ATTTCGGCCACCACAAGAAG+AGG - chr1_1:38816175-38816194 Msa0021550:intron 50.0%
! ACCGGATTCGACTTGAGGTA+AGG - chr1_1:38816276-38816295 Msa0021550:intron 50.0%
! TGGAGGTTGATCGGAGAAGA+AGG - chr1_1:38816530-38816549 Msa0021550:intron 50.0%
GAAAACCAAGTGAACCGGTC+CGG + chr1_1:38816677-38816696 None:intergenic 50.0%
CCAGCTAGATCTAACGGTTG+AGG + chr1_1:38816711-38816730 None:intergenic 50.0%
CCTCAACCGTTAGATCTAGC+TGG - chr1_1:38816708-38816727 Msa0021550:intron 50.0%
CTGGATCATCCAAACGTGTG+AGG + chr1_1:38816748-38816767 None:intergenic 50.0%
CTCACACGTTTGGATGATCC+AGG - chr1_1:38816746-38816765 Msa0021550:CDS 50.0%
AAGTCCAGGCCCAAGGTAAA+TGG + chr1_1:38816774-38816793 None:intergenic 50.0%
GTAACAAAAGTCCAGGCCCA+AGG + chr1_1:38816781-38816800 None:intergenic 50.0%
CTATCCCTCTGCCATCAACT+AGG + chr1_1:38817599-38817618 None:intergenic 50.0%
GGTTGCATGACAGCTAGACA+TGG + chr1_1:38817970-38817989 None:intergenic 50.0%
CCCCCAAAAAAACGGGGAAA+TGG + chr1_1:38817991-38818010 None:intergenic 50.0%
! GACTGGCCAGTTAGATTGGT+TGG - chr1_1:38818128-38818147 Msa0021550:intron 50.0%
CAACTCATATTAGGGGCCTC+CGG - chr1_1:38818432-38818451 Msa0021550:intron 50.0%
AACTCATATTAGGGGCCTCC+GGG - chr1_1:38818433-38818452 Msa0021550:intron 50.0%
GGGAAGACTCAGACCATACT+TGG - chr1_1:38818460-38818479 Msa0021550:intron 50.0%
! GGTGCCACAGTTACCAATTG+AGG - chr1_1:38818796-38818815 Msa0021550:intron 50.0%
CAGTCCGAAATTAGAGCCAC+AGG + chr1_1:38818900-38818919 None:intergenic 50.0%
!! CTGTGGCTCTAATTTCGGAC+TGG - chr1_1:38818898-38818917 Msa0021550:intron 50.0%
TACTCATGCCGAGCACTTCA+TGG - chr1_1:38819458-38819477 Msa0021550:intron 50.0%
CGAGCACTTCATGGACACTT+TGG - chr1_1:38819596-38819615 Msa0021550:intron 50.0%
CCGCAACGCAATCTCATCAA+GGG + chr1_1:38820824-38820843 None:intergenic 50.0%
CCCTTGATGAGATTGCGTTG+CGG - chr1_1:38820821-38820840 Msa0021550:intron 50.0%
CCTTGATGAGATTGCGTTGC+GGG - chr1_1:38820822-38820841 Msa0021550:intron 50.0%
! ATTGCGTTGCGGGTTTTCAG+TGG - chr1_1:38820832-38820851 Msa0021550:intron 50.0%
GTGGGGGTTAAAGGTTTACC+TGG - chr1_1:38821493-38821512 Msa0021550:intron 50.0%
GGATGTTATTGCCAACCAGG+TGG - chr1_1:38821530-38821549 Msa0021550:intron 50.0%
TTATTGCCAACCAGGTGGTG+CGG - chr1_1:38821535-38821554 Msa0021550:intron 50.0%
TGCCCGAAAATTGTGAGGGT+TGG - chr1_1:38821735-38821754 Msa0021550:intron 50.0%
AAAACCCCTCAGGAACAGGT+TGG - chr1_1:38822420-38822439 Msa0021550:intron 50.0%
AAACCCCTCAGGAACAGGTT+GGG - chr1_1:38822421-38822440 Msa0021550:intron 50.0%
TCATCCCAACCTGTTCCTGA+GGG + chr1_1:38822428-38822447 None:intergenic 50.0%
GAGGAACGAGTTGTGAGAGA+CGG - chr1_1:38822584-38822603 Msa0021550:intron 50.0%
TTGGGAGAGAGAAGGTTCTG+TGG - chr1_1:38822634-38822653 Msa0021550:intron 50.0%
CATATCCTGCCTCCTTATCC+TGG - chr1_1:38822839-38822858 Msa0021550:CDS 50.0%
! GTTTGATGGCCAGGATAAGG+AGG + chr1_1:38822851-38822870 None:intergenic 50.0%
! TCCGTTTGATGGCCAGGATA+AGG + chr1_1:38822854-38822873 None:intergenic 50.0%
! CCGAGCTGCAATTTTGGATG+AGG - chr1_1:38823293-38823312 Msa0021550:intron 50.0%
! TGAAGCACTAAAGCTGAGGG+TGG + chr1_1:38823419-38823438 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG + chr1_1:38821158-38821177 None:intergenic 50.0%
ACCAGCAACTCTTGTTCCCT+TGG - chr1_1:38824057-38824076 Msa0021550:intron 50.0%
AAAAGGATGGCAGGTGGTGA+CGG + chr1_1:38825450-38825469 None:intergenic 50.0%
! TCACCACCTGCCATCCTTTT+CGG - chr1_1:38825450-38825469 Msa0021550:intron 50.0%
ACTCATCCGAAAAGGATGGC+AGG + chr1_1:38825459-38825478 None:intergenic 50.0%
GCTTCACATCCAGAGTTCGT+TGG - chr1_1:38825639-38825658 Msa0021550:intron 50.0%
AGCCCACATCCTAGCATGAT+TGG + chr1_1:38825765-38825784 None:intergenic 50.0%
CAATTCCTTGGAAGATGGGG+AGG - chr1_1:38825982-38826001 Msa0021550:CDS 50.0%
AGGAAAATGGGCCAAAGCAG+CGG + chr1_1:38826045-38826064 None:intergenic 50.0%
GAGTGGTTCGTGGGTAAATG+TGG - chr1_1:38826105-38826124 Msa0021550:intron 50.0%
TGGTTCGTGGGTAAATGTGG+AGG - chr1_1:38826108-38826127 Msa0021550:intron 50.0%
CGTTATCCCACACTCAAGTC+AGG - chr1_1:38826172-38826191 Msa0021550:CDS 50.0%
!! GAGGTTGACTTGTCCACTGT+AGG + chr1_1:38826221-38826240 None:intergenic 50.0%
GGGCAGATCGCAATTAAGGT+GGG + chr1_1:38826450-38826469 None:intergenic 50.0%
CTAGGGGCAGATCGCAATTA+AGG + chr1_1:38826454-38826473 None:intergenic 50.0%
TGCCCCTAGTTGCCTTATGT+TGG - chr1_1:38826465-38826484 Msa0021550:intron 50.0%
!! TAGTCCCGCATCGGTTAGAT+AGG - chr1_1:38826510-38826529 Msa0021550:intron 50.0%
GCTTCCTATCTAACCGATGC+GGG + chr1_1:38826517-38826536 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_1:38826569-38826588 None:intergenic 50.0%
TAAGCACCCATGCAAGTGTC+TGG - chr1_1:38826729-38826748 Msa0021550:intron 50.0%
TAAGCACCCATGCAAGTGTC+TGG - chr1_1:38826729-38826748 Msa0021550:intron 50.0%
! AATGAACTTGGTGACCTGGG+GGG + chr1_1:38827019-38827038 None:intergenic 50.0%
! GAATGAACTTGGTGACCTGG+GGG + chr1_1:38827020-38827039 None:intergenic 50.0%
! GCAGAATGAACTTGGTGACC+TGG + chr1_1:38827023-38827042 None:intergenic 50.0%
ATGGAGGAGCAAACTGGAAC+TGG - chr1_1:38827116-38827135 Msa0021550:intron 50.0%
CAACACTGCAGACTTTGCTC+TGG + chr1_1:38827574-38827593 None:intergenic 50.0%
CAGAGCAAAGTCTGCAGTGT+TGG - chr1_1:38827572-38827591 Msa0021550:intron 50.0%
TTGGGTCTGCCTCAACATTG+AGG - chr1_1:38827682-38827701 Msa0021550:intron 50.0%
TCAGCACTTTCTGTCTCCTC+AGG + chr1_1:38828329-38828348 None:intergenic 50.0%
! GATGCTGACATGGGTTATGG+AGG - chr1_1:38828434-38828453 Msa0021550:intron 50.0%
! GTGCCGGCGACTTAGCAAAA+GGG + chr1_1:38809800-38809819 None:intergenic 55.0%
! TGTGCCGGCGACTTAGCAAA+AGG + chr1_1:38809801-38809820 None:intergenic 55.0%
! CGGAAGGGTTTAGAGTGTGC+CGG + chr1_1:38809816-38809835 None:intergenic 55.0%
CGGCACACTCTAAACCCTTC+CGG - chr1_1:38809814-38809833 Msa0021550:three_prime_UTR 55.0%
CACACTCTAAACCCTTCCGG+TGG - chr1_1:38809817-38809836 Msa0021550:three_prime_UTR 55.0%
AACCCTTCCGGTGGCAGTTT+CGG - chr1_1:38809826-38809845 Msa0021550:three_prime_UTR 55.0%
AACCGAAACTGCCACCGGAA+GGG + chr1_1:38809831-38809850 None:intergenic 55.0%
TAACCGAAACTGCCACCGGA+AGG + chr1_1:38809832-38809851 None:intergenic 55.0%
GACGACACGAGACGGATAGA+GGG + chr1_1:38809892-38809911 None:intergenic 55.0%
AGACGACACGAGACGGATAG+AGG + chr1_1:38809893-38809912 None:intergenic 55.0%
GTGAAGGAGACGACACGAGA+CGG + chr1_1:38809900-38809919 None:intergenic 55.0%
! ACCGCGCACACTCCATTTTC+AGG - chr1_1:38809920-38809939 Msa0021550:three_prime_UTR 55.0%
TGGTGATTGCAGGGGCTGAA+TGG - chr1_1:38812172-38812191 Msa0021550:intron 55.0%
GCAGGGGCTGAATGGAAGTT+AGG - chr1_1:38812180-38812199 Msa0021550:intron 55.0%
GGCTGAATGGAAGTTAGGGG+CGG - chr1_1:38812185-38812204 Msa0021550:intron 55.0%
CGGTGCGAACATACTTGGGA+TGG + chr1_1:38813470-38813489 None:intergenic 55.0%
AACACCACCTCCAGCACGAT+AGG - chr1_1:38813917-38813936 Msa0021550:intron 55.0%
ACACCACCTCCAGCACGATA+GGG - chr1_1:38813918-38813937 Msa0021550:intron 55.0%
GCTACGGCCTCATGAAGCTA+CGG + chr1_1:38815015-38815034 None:intergenic 55.0%
TGCGTAGCATAGCGGCACTT+AGG - chr1_1:38815052-38815071 Msa0021550:CDS 55.0%
TGTCGGTCCCACTCGCATAA+CGG + chr1_1:38815254-38815273 None:intergenic 55.0%
CATCTCCCTCCACAAGTGCA+AGG - chr1_1:38816149-38816168 Msa0021550:intron 55.0%
ATCGGCCTTGCACTTGTGGA+GGG + chr1_1:38816157-38816176 None:intergenic 55.0%
AATCGGCCTTGCACTTGTGG+AGG + chr1_1:38816158-38816177 None:intergenic 55.0%
CGAAATCGGCCTTGCACTTG+TGG + chr1_1:38816161-38816180 None:intergenic 55.0%
AGGGAAGAACGCTTGCGAAC+CGG - chr1_1:38816258-38816277 Msa0021550:intron 55.0%
! TGCGAACCGGATTCGACTTG+AGG - chr1_1:38816271-38816290 Msa0021550:intron 55.0%
CTTCTCCGATCAACCTCCAC+CGG + chr1_1:38816529-38816548 None:intergenic 55.0%
! TTGAACCGGACCGGTTCACT+TGG - chr1_1:38816669-38816688 Msa0021550:intron 55.0%
TCCAACGCTCCTCACACGTT+TGG - chr1_1:38816736-38816755 Msa0021550:CDS 55.0%
! TCCAAACGTGTGAGGAGCGT+TGG + chr1_1:38816740-38816759 None:intergenic 55.0%
GGCCCAAGGTAAATGGATCC+TGG + chr1_1:38816767-38816786 None:intergenic 55.0%
GGATCCATTTACCTTGGGCC+TGG - chr1_1:38816767-38816786 Msa0021550:CDS 55.0%
CCCTCTGCCATCAACTAGGT+CGG + chr1_1:38817595-38817614 None:intergenic 55.0%
!! CCGACCTAGTTGATGGCAGA+GGG - chr1_1:38817592-38817611 Msa0021550:intron 55.0%
CGGAGGCCCCTAATATGAGT+TGG + chr1_1:38818434-38818453 None:intergenic 55.0%
GTCTGAGTCTTCCCAGTACC+CGG + chr1_1:38818454-38818473 None:intergenic 55.0%
! TGGCACCTGCTTTAGCTCGA+AGG + chr1_1:38818783-38818802 None:intergenic 55.0%
CCCGCAACGCAATCTCATCA+AGG + chr1_1:38820825-38820844 None:intergenic 55.0%
CATCCCAACCTGTTCCTGAG+GGG + chr1_1:38822427-38822446 None:intergenic 55.0%
CTCATCCCAACCTGTTCCTG+AGG + chr1_1:38822429-38822448 None:intergenic 55.0%
! CTCAGGAACAGGTTGGGATG+AGG - chr1_1:38822427-38822446 Msa0021550:intron 55.0%
GAACGAGTTGTGAGAGACGG+AGG - chr1_1:38822587-38822606 Msa0021550:intron 55.0%
GTGTCCAAGGGTCCGTTTGA+TGG + chr1_1:38822865-38822884 None:intergenic 55.0%
GCCAAGGGAACAAGAGTTGC+TGG + chr1_1:38824061-38824080 None:intergenic 55.0%
ACGGTTGCTGGAAGTTGAGC+TGG + chr1_1:38824526-38824545 None:intergenic 55.0%
CATCCGAAAAGGATGGCAGG+TGG + chr1_1:38825456-38825475 None:intergenic 55.0%
! TGGCATAGGTACCGCTGCTT+TGG - chr1_1:38826031-38826050 Msa0021550:CDS 55.0%
AGCCATTTGGGAGTGGTTCG+TGG - chr1_1:38826095-38826114 Msa0021550:intron 55.0%
GCCATTTGGGAGTGGTTCGT+GGG - chr1_1:38826096-38826115 Msa0021550:intron 55.0%
ACCCACGAACCACTCCCAAA+TGG + chr1_1:38826100-38826119 None:intergenic 55.0%
GGGGCAGATCGCAATTAAGG+TGG + chr1_1:38826451-38826470 None:intergenic 55.0%
!! TTGGCTTGTCTCTGAGAGGG+TGG - chr1_1:38826484-38826503 Msa0021550:intron 55.0%
! GGGTGGATTTAGTCCCGCAT+CGG - chr1_1:38826501-38826520 Msa0021550:intron 55.0%
GCACTCCTCACCTTACAAGC+CGG - chr1_1:38826561-38826580 Msa0021550:intron 55.0%
TTTGCCAATTACTGCCCCCC+AGG - chr1_1:38827002-38827021 Msa0021550:intron 55.0%
! GGTGTGATGGAGGAGCAAAC+TGG - chr1_1:38827110-38827129 Msa0021550:intron 55.0%
GGTCTGCCTCAACATTGAGG+AGG - chr1_1:38827685-38827704 Msa0021550:intron 55.0%
GCACTTTCTGTCTCCTCAGG+TGG + chr1_1:38828326-38828345 None:intergenic 55.0%
! GGGGATGCTGACATGGGTTA+TGG - chr1_1:38828431-38828450 Msa0021550:intron 55.0%
ATGGAGTGTGCGCGGTGTGA+AGG + chr1_1:38809916-38809935 None:intergenic 60.0%
ACTCCCTATCGTGCTGGAGG+TGG + chr1_1:38813924-38813943 None:intergenic 60.0%
GGAACTCCCTATCGTGCTGG+AGG + chr1_1:38813927-38813946 None:intergenic 60.0%
GCACACCTCTGGCCTAATGC+TGG + chr1_1:38814600-38814619 None:intergenic 60.0%
TATGCGAGTGGGACCGACAG+TGG - chr1_1:38815255-38815274 Msa0021550:CDS 60.0%
TCGGCCACCACAAGAAGAGG+AGG - chr1_1:38816178-38816197 Msa0021550:intron 60.0%
GCCACCACAAGAAGAGGAGG+AGG - chr1_1:38816181-38816200 Msa0021550:intron 60.0%
GCCTCCTCCTCTTCTTGTGG+TGG + chr1_1:38816185-38816204 None:intergenic 60.0%
ACTCGCGGTCGGAGCTTAAC+CGG - chr1_1:38816233-38816252 Msa0021550:intron 60.0%
GGTCGGAGCTTAACCGGAGA+GGG - chr1_1:38816239-38816258 Msa0021550:intron 60.0%
CGCAAGCGTTCTTCCCTCTC+CGG + chr1_1:38816255-38816274 None:intergenic 60.0%
CCGGTTCAAGCGAACCGAAC+CGG + chr1_1:38816658-38816677 None:intergenic 60.0%
!! CCGGTTCGGTTCGCTTGAAC+CGG - chr1_1:38816655-38816674 Msa0021550:intron 60.0%
! TCGGTTCGCTTGAACCGGAC+CGG - chr1_1:38816660-38816679 Msa0021550:intron 60.0%
!! GCCGACCTAGTTGATGGCAG+AGG - chr1_1:38817591-38817610 Msa0021550:intron 60.0%
TATTAGGGGCCTCCGGGTAC+TGG - chr1_1:38818439-38818458 Msa0021550:intron 60.0%
ATTAGGGGCCTCCGGGTACT+GGG - chr1_1:38818440-38818459 Msa0021550:intron 60.0%
TGAGTCTTCCCAGTACCCGG+AGG + chr1_1:38818451-38818470 None:intergenic 60.0%
CGGGACCTTCGAGCTAAAGC+AGG - chr1_1:38818775-38818794 Msa0021550:intron 60.0%
! GCGTTGCGGGTTTTCAGTGG+AGG - chr1_1:38820835-38820854 Msa0021550:intron 60.0%
GATGGCCAGGATAAGGAGGC+AGG + chr1_1:38822847-38822866 None:intergenic 60.0%
! CAAGGGTCCGTTTGATGGCC+AGG + chr1_1:38822860-38822879 None:intergenic 60.0%
CTGGCCATCAAACGGACCCT+TGG - chr1_1:38822858-38822877 Msa0021550:CDS 60.0%
GACGCAGTCATGGCTGCTAC+AGG + chr1_1:38825368-38825387 None:intergenic 60.0%
AGCAGCCATGACTGCGTCAC+CGG - chr1_1:38825370-38825389 Msa0021550:intron 60.0%
AGTGGCAGATGGGAGCCTTC+CGG + chr1_1:38825392-38825411 None:intergenic 60.0%
AAATCCCGCCCCGACTGTGA+GGG - chr1_1:38826410-38826429 Msa0021550:intron 60.0%
GTGACCTGGGGGGCAGTAAT+TGG + chr1_1:38827009-38827028 None:intergenic 60.0%
GTGCAACAAGAACCGCCCAC+TGG + chr1_1:38827240-38827259 None:intergenic 60.0%
TGGAGACGGGGATGCTGACA+TGG - chr1_1:38828424-38828443 Msa0021550:intron 60.0%
GGAGACGGGGATGCTGACAT+GGG - chr1_1:38828425-38828444 Msa0021550:intron 60.0%
CGCGCCTCCTCCTCTTCTTG+TGG + chr1_1:38816188-38816207 None:intergenic 65.0%
! CAAGAAGAGGAGGAGGCGCG+CGG - chr1_1:38816188-38816207 Msa0021550:intron 65.0%
CGGTCGGAGCTTAACCGGAG+AGG - chr1_1:38816238-38816257 Msa0021550:intron 65.0%
CCGATCAACCTCCACCGGTC+CGG + chr1_1:38816524-38816543 None:intergenic 65.0%
! CCGGACCGGTGGAGGTTGAT+CGG - chr1_1:38816521-38816540 Msa0021550:intron 65.0%
! GACTAGCCGCACCACCTGGT+TGG + chr1_1:38821544-38821563 None:intergenic 65.0%
!! CAAGGACTAGCCGCACCACC+TGG + chr1_1:38821548-38821567 None:intergenic 65.0%
GCCATGACTGCGTCACCGGA+AGG - chr1_1:38825374-38825393 Msa0021550:intron 65.0%
GCCTTCCGGTGACGCAGTCA+TGG + chr1_1:38825378-38825397 None:intergenic 65.0%
!! GCAGGTGGTGACGGTGCATG+AGG + chr1_1:38825441-38825460 None:intergenic 65.0%
GACGCCCTCCCCATCTTCCA+AGG + chr1_1:38825990-38826009 None:intergenic 65.0%
GAAATCCCGCCCCGACTGTG+AGG - chr1_1:38826409-38826428 Msa0021550:intron 65.0%
AATCCCGCCCCGACTGTGAG+GGG - chr1_1:38826411-38826430 Msa0021550:intron 65.0%
GACACACCCCCTCACAGTCG+GGG + chr1_1:38826421-38826440 None:intergenic 65.0%
CGACACACCCCCTCACAGTC+GGG + chr1_1:38826422-38826441 None:intergenic 65.0%
CCGACACACCCCCTCACAGT+CGG + chr1_1:38826423-38826442 None:intergenic 65.0%
! CCGACTGTGAGGGGGTGTGT+CGG - chr1_1:38826420-38826439 Msa0021550:intron 65.0%
GAGGCGCGCGGCAACCACAA+GGG - chr1_1:38816200-38816219 Msa0021550:intron 70.0%
AGGCGCGCGGCAACCACAAG+GGG - chr1_1:38816201-38816220 Msa0021550:intron 70.0%
ATCCCGCCCCGACTGTGAGG+GGG - chr1_1:38826412-38826431 Msa0021550:intron 70.0%
ACACCCCCTCACAGTCGGGG+CGG + chr1_1:38826418-38826437 None:intergenic 70.0%
! GGAGGCGCGCGGCAACCACA+AGG - chr1_1:38816199-38816218 Msa0021550:intron 75.0%
! AGGTGGCGGCACCACCGCGT+CGG + chr1_1:38816481-38816500 None:intergenic 75.0%
CAACCTCCACCGGTCCGGCG+CGG + chr1_1:38816519-38816538 None:intergenic 75.0%
CACCCCCTCACAGTCGGGGC+GGG + chr1_1:38826417-38826436 None:intergenic 75.0%
!!! GCGGTGGTGCCGCCACCTCG+CGG - chr1_1:38816483-38816502 Msa0021550:intron 80.0%
!!! GTGGTGCCGCCACCTCGCGG+TGG - chr1_1:38816486-38816505 Msa0021550:intron 80.0%
! GGGCGACCACCGCGAGGTGG+CGG + chr1_1:38816495-38816514 None:intergenic 80.0%
! GGTGGGCGACCACCGCGAGG+TGG + chr1_1:38816498-38816517 None:intergenic 80.0%
! CTCCACCGGTCCGGCGCGGT+GGG + chr1_1:38816515-38816534 None:intergenic 80.0%
! CGCGGTGGGCGACCACCGCG+AGG + chr1_1:38816501-38816520 None:intergenic 85.0%
! GCGGTGGTCGCCCACCGCGC+CGG - chr1_1:38816502-38816521 Msa0021550:intron 85.0%
! GGTCGCCCACCGCGCCGGAC+CGG - chr1_1:38816507-38816526 Msa0021550:intron 85.0%
! CCTCCACCGGTCCGGCGCGG+TGG + chr1_1:38816516-38816535 None:intergenic 85.0%
! CCACCGCGCCGGACCGGTGG+AGG - chr1_1:38816513-38816532 Msa0021550:intron 85.0%
! CGCCCACCGCGCCGGACCGG+TGG - chr1_1:38816510-38816529 Msa0021550:intron 90.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 38809777 38828736 38809777 ID=Msa0021550;Name=Msa0021550
chr1_1 mRNA 38809777 38828736 38809777 ID=Msa0021550-mRNA-1;Parent=Msa0021550;Name=Msa0021550-mRNA-1;_AED=0.13;_eAED=0.13;_QI=190|1|1|1|0.9|0.90|21|267|816
chr1_1 exon 38809777 38810259 38809777 ID=Msa0021550-mRNA-1:exon:11957;Parent=Msa0021550-mRNA-1
chr1_1 exon 38810749 38810835 38810749 ID=Msa0021550-mRNA-1:exon:11956;Parent=Msa0021550-mRNA-1
chr1_1 exon 38810920 38811042 38810920 ID=Msa0021550-mRNA-1:exon:11955;Parent=Msa0021550-mRNA-1
chr1_1 exon 38812195 38812563 38812195 ID=Msa0021550-mRNA-1:exon:11954;Parent=Msa0021550-mRNA-1
chr1_1 exon 38813754 38813838 38813754 ID=Msa0021550-mRNA-1:exon:11953;Parent=Msa0021550-mRNA-1
chr1_1 exon 38813941 38813999 38813941 ID=Msa0021550-mRNA-1:exon:11952;Parent=Msa0021550-mRNA-1
chr1_1 exon 38814408 38814461 38814408 ID=Msa0021550-mRNA-1:exon:11951;Parent=Msa0021550-mRNA-1
chr1_1 exon 38815012 38815104 38815012 ID=Msa0021550-mRNA-1:exon:11950;Parent=Msa0021550-mRNA-1
chr1_1 exon 38815190 38815300 38815190 ID=Msa0021550-mRNA-1:exon:11949;Parent=Msa0021550-mRNA-1
chr1_1 exon 38816710 38816807 38816710 ID=Msa0021550-mRNA-1:exon:11948;Parent=Msa0021550-mRNA-1
chr1_1 exon 38817657 38817762 38817657 ID=Msa0021550-mRNA-1:exon:11947;Parent=Msa0021550-mRNA-1
chr1_1 exon 38817838 38817949 38817838 ID=Msa0021550-mRNA-1:exon:11946;Parent=Msa0021550-mRNA-1
chr1_1 exon 38819691 38819741 38819691 ID=Msa0021550-mRNA-1:exon:11945;Parent=Msa0021550-mRNA-1
chr1_1 exon 38819983 38820068 38819983 ID=Msa0021550-mRNA-1:exon:11944;Parent=Msa0021550-mRNA-1
chr1_1 exon 38820702 38820737 38820702 ID=Msa0021550-mRNA-1:exon:11943;Parent=Msa0021550-mRNA-1
chr1_1 exon 38822759 38822944 38822759 ID=Msa0021550-mRNA-1:exon:11942;Parent=Msa0021550-mRNA-1
chr1_1 exon 38825890 38826063 38825890 ID=Msa0021550-mRNA-1:exon:11941;Parent=Msa0021550-mRNA-1
chr1_1 exon 38826172 38826329 38826172 ID=Msa0021550-mRNA-1:exon:11940;Parent=Msa0021550-mRNA-1
chr1_1 exon 38827901 38828051 38827901 ID=Msa0021550-mRNA-1:exon:11939;Parent=Msa0021550-mRNA-1
chr1_1 exon 38828173 38828293 38828173 ID=Msa0021550-mRNA-1:exon:11938;Parent=Msa0021550-mRNA-1
chr1_1 exon 38828572 38828736 38828572 ID=Msa0021550-mRNA-1:exon:11937;Parent=Msa0021550-mRNA-1
chr1_1 five_prime_UTR 38828572 38828736 38828572 ID=Msa0021550-mRNA-1:five_prime_utr;Parent=Msa0021550-mRNA-1
chr1_1 five_prime_UTR 38828269 38828293 38828269 ID=Msa0021550-mRNA-1:five_prime_utr;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38828173 38828268 38828173 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38827901 38828051 38827901 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38826172 38826329 38826172 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38825890 38826063 38825890 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38822759 38822944 38822759 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38820702 38820737 38820702 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38819983 38820068 38819983 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38819691 38819741 38819691 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38817838 38817949 38817838 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38817657 38817762 38817657 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38816710 38816807 38816710 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38815190 38815300 38815190 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38815012 38815104 38815012 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38814408 38814461 38814408 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38813941 38813999 38813941 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38813754 38813838 38813754 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38812195 38812563 38812195 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38810920 38811042 38810920 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38810749 38810835 38810749 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 CDS 38810044 38810259 38810044 ID=Msa0021550-mRNA-1:cds;Parent=Msa0021550-mRNA-1
chr1_1 three_prime_UTR 38809777 38810043 38809777 ID=Msa0021550-mRNA-1:three_prime_utr;Parent=Msa0021550-mRNA-1
Gene Sequence

>Msa0021550

ATGGCGTTGGATAAGGAAAAGCTTGAAGAAGAATCCACAATTCATCGTTTCTACAAGATTATTCTTGCTTGGGATTACGTTACTCTAGAAGCCGAGAATAAGAGAAGAAACAATGGGAACGCTACTACTTCCAAACTCGTCAACGTCAAGAATCAATACAAAGATGTTCAAGATTATGTGAACACCTATGAGCCTCTCATTCTTGAAGAAGCCAAATCACAAATCATTCGTGGCGATAAAGATGAAGGGGCTGAATGGAAGTTAGGGGCGGTACCGAATCGCGACAACAAGCCTGAACAGAGTCACAACAAGCCAGATGACTTTCATTTTCTAGAGTTTCTTTTTGATATGGAAGAGGGAGAATCAATATCACAGAATGATCTAATTCTGATTTCAAATGAAGAGCGTGTAAATGACAATACTACGCATGCATTTGCTTTGGTGGAAAACGTGCAAAAATTTTCTGAACCAAAAGTTCTTCGAGTTAGACTCTATCTACCGGGAGATAATGTGAAATCAAGGCTGTTCAAAATGCGATCTCATATAAGCGTGGAAGGGAATCAATTGCATTTTATGAGGATGTGCAGTTTATCTACCATTGCTCGTGAGTATGTGGCTATACGAACGATAAGCAATCTCCCATTCAAGGATTTAATATTAAATGCTGTTGGAGAGGATTTTGGTTCTGAAGGATGGAAAATCCCATTACCTTTGGATAAATACGTTAATGATAGTTTCAATCCATATCAACGTGAGGCCATAACAGCTGGTCTATTATCAAAAACCTTTGTTCTGATACAGGGGCCTCCGGGTACTGGGAAGACTCAGACCATACTTGGGATTCTGAGTACTATTTTACATGCAACACCAATGAGAGTACAGTCAAAGAACGGGACCTTCGAGCTAAAGCAGGTGCCACAGTTACCAATTGAGGAGAAACGTAGACATTGGAGATTAGCATCTCCATGGTTACATGGCATCAATCCAAGGGATAGTCTGATGCCAAAAGATGGCGATGATGGTTTTTTCCCAACTACTGGAAATGAATTAAAACCTGAAGCTGTAACTTCAACTCGTAAGTATCGTGTAAGAATTCTAGTATGCGCCCCTTCAAATTCTGCCCTTGATGAGATTGCGTTGCGGGTTTTCAGTGGAGGCATCCACGATGAAAATGACAAAGCTTATTGCCCGAAAATTGTGAGGGTTGGTCTCAAAGCACACCATTCTATCAAGGCTGTTACCCTAGACGAACTTCTGAAAAAAAGACGTAGTGCCAACATATCATCTACTGGTAAGCAGAATAATGCTTCTGCAGGAAGCAATGATGACACTATCCGAGCTGCAATTTTGGATGAGGCCACAATTGTCTTCTCCACCCTCAGCTTTAGTGCTTCAAATGTTTTCAGTAAAGTAAGTCGAAACTTTGACGTTGTGATTATAGATGAAGCCGCACAAGCTGTGGAACCAGCAACTCTTGTTCCCTTGGCCAATAAATGCAAAAAAGTTTTTCTGGTTGGTGATCCAGCTCAACTTCCAGCAACCGTAATTTCGGACATTGCTAAAAATCATGGATATGGAACAAGCTTATTTGAAAGACTGAAGCAAGCTGGTTATCCCATTAAAATGTTGAAGACACAATATCGAATGCATCCTGAGATAAGAAGCTTTCCCTCGATGGAGTTTTATAACAATTCCTTGGAAGATGGGGAGGGCGTCAAAATACAGACAGAACGTGATTGGCATAGGTACCGCTGCTTTGGCCCATTTTCCTTCTTTGATATACACGAGGGAAAAGAAACTAAGCCATTTGGGAGTGGTTCGTGGGTAAATGTGGAGGAAGTTGATTTTGTCCTGTTATTGTATCAAAAATTGGTATCACGTTATCCCACACTCAAGTCAGGAAACCAAGTTGCAATTATAACACCCTACAGTGGACAAGTCAACCTCTTCAAACAACGTTTTGAAGAGACTTTTGGCGTGTCAGCAGAGAAATTAGTGGATATATGTACCATTGATGGTTGCCAGGGGCGTGAAAAGGACGTTGCAATATTTTCATGTGTCAGAGCAAGTAAAGAAGGAGGTATAGGGTTTGTGGATGACATTCGACGAATGAACGTTGGGATCACCAGAGCAAAGTCTGCAGTGTTGGTGGTTGGGTCTGCCTCAACATTGAGGAGGAACGTACAATGGAACAAGCTTGTGGAAAGTGCTGAGAAAAGGGACTGTTTCTTCAAAGCGTCTAAACCATATCCCTCATTCTTAAGTGATGAAAATCTTGAATCCATGAAGAAAAAAACAGATGAACCACCTGAGGAGACAGAAAGTGCTGATAGAGTAAACAATGATGCGCGAATGGACAATGTTGCAGAACATACTTATCAAGAGCAAGCTGATGACAACGATTATGGAGACGGGGATGCTGACATGGGTTATGGAGGTGATGATGATTAG
Protein sequence

>Msa0021550

MALDKEKLEEESTIHRFYKIILAWDYVTLEAENKRRNNGNATTSKLVNVKNQYKDVQDYVNTYEPLILEEAKSQIIRGDKDEGAEWKLGAVPNRDNKPEQSHNKPDDFHFLEFLFDMEEGESISQNDLILISNEERVNDNTTHAFALVENVQKFSEPKVLRVRLYLPGDNVKSRLFKMRSHISVEGNQLHFMRMCSLSTIAREYVAIRTISNLPFKDLILNAVGEDFGSEGWKIPLPLDKYVNDSFNPYQREAITAGLLSKTFVLIQGPPGTGKTQTILGILSTILHATPMRVQSKNGTFELKQVPQLPIEEKRRHWRLASPWLHGINPRDSLMPKDGDDGFFPTTGNELKPEAVTSTRKYRVRILVCAPSNSALDEIALRVFSGGIHDENDKAYCPKIVRVGLKAHHSIKAVTLDELLKKRRSANISSTGKQNNASAGSNDDTIRAAILDEATIVFSTLSFSASNVFSKVSRNFDVVIIDEAAQAVEPATLVPLANKCKKVFLVGDPAQLPATVISDIAKNHGYGTSLFERLKQAGYPIKMLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQTERDWHRYRCFGPFSFFDIHEGKETKPFGSGSWVNVEEVDFVLLLYQKLVSRYPTLKSGNQVAIITPYSGQVNLFKQRFEETFGVSAEKLVDICTIDGCQGREKDVAIFSCVRASKEGGIGFVDDIRRMNVGITRAKSAVLVVGSASTLRRNVQWNKLVESAEKRDCFFKASKPYPSFLSDENLESMKKKTDEPPEETESADRVNNDARMDNVAEHTYQEQADDNDYGDGDADMGYGGDDD*