AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027080 MtrunA17_Chr1g0183001 99.075 1513 13 1 30 1541 1 1513 0.0 3130
Msa0027080 MtrunA17_Chr7g0262581 84.865 1513 225 3 30 1541 1 1510 0.0 2682
Msa0027080 MtrunA17_Chr4g0070771 64.741 1523 512 9 37 1539 8 1525 0.0 2015
Msa0027080 MtrunA17_Chr2g0309291 59.632 1578 564 12 30 1539 1 1573 0.0 1905
Msa0027080 MtrunA17_Chr1g0151061 53.485 1535 653 16 39 1540 6 1512 0.0 1608
Msa0027080 MtrunA17_Chr1g0190471 63.483 1068 352 5 30 1061 1 1066 0.0 1389
Msa0027080 MtrunA17_Chr7g0274361 61.960 1041 311 6 31 1060 48 1014 0.0 1320
Msa0027080 MtrunA17_Chr1g0184391 59.012 1032 396 8 37 1061 8 1019 0.0 1234
Msa0027080 MtrunA17_Chr3g0136341 58.724 1066 415 9 39 1091 6 1059 0.0 1222
Msa0027080 MtrunA17_Chr1g0184601 64.358 895 312 5 37 927 10 901 0.0 1207
Msa0027080 MtrunA17_Chr1g0164271 66.952 702 216 6 393 1088 45 736 0.0 915
Msa0027080 MtrunA17_Chr1g0164271 38.782 312 124 5 951 1248 759 1017 3.99e-55 210
Msa0027080 MtrunA17_Chr1g0164931 38.431 994 548 23 34 991 114 1079 0.0 640
Msa0027080 MtrunA17_Chr1g0212011 42.497 833 442 16 41 854 130 944 0.0 629
Msa0027080 MtrunA17_Chr2g0318501 41.762 783 423 16 41 808 144 908 0.0 593
Msa0027080 MtrunA17_Chr8g0360791 40.024 832 448 16 41 853 125 924 1.29e-178 566
Msa0027080 MtrunA17_Chr1g0164291 74.545 275 69 1 31 305 14 287 3.55e-137 424
Msa0027080 MtrunA17_Chr3g0136351 49.512 410 183 5 1142 1539 32 429 2.53e-126 400
Msa0027080 MtrunA17_Chr1g0164261 54.393 239 99 2 1265 1503 27 255 4.74e-85 278
Msa0027080 MtrunA17_Chr7g0274371 46.815 314 146 4 1060 1353 4 316 3.40e-83 276
Msa0027080 MtrunA17_Chr7g0274381 61.622 185 52 1 1355 1539 43 208 1.58e-72 241
Msa0027080 MtrunA17_Chr1g0164281 70.874 103 26 2 294 392 2 104 1.04e-42 151
Msa0027080 MtrunA17_Chr1g0164251 58.929 112 39 1 1137 1248 1 105 9.93e-39 140
Msa0027080 MtrunA17_Chr1g0164241 43.411 129 45 2 1375 1503 1 101 5.90e-29 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027080 AT5G43900.3 74.507 1522 370 8 25 1540 56 1565 0.0 2338
Msa0027080 AT5G43900.1 74.983 1511 360 8 36 1540 7 1505 0.0 2334
Msa0027080 AT5G43900.2 74.310 1522 370 9 25 1540 56 1562 0.0 2326
Msa0027080 AT1G04160.1 72.937 1515 392 7 29 1540 1 1500 0.0 2318
Msa0027080 AT4G28710.1 71.739 1518 403 6 38 1539 8 1515 0.0 2260
Msa0027080 AT1G04160.2 73.186 1406 359 7 29 1431 1 1391 0.0 2148
Msa0027080 AT2G20290.2 66.932 1509 467 12 34 1540 4 1482 0.0 2030
Msa0027080 AT2G20290.1 66.932 1509 467 12 34 1540 15 1493 0.0 2029
Msa0027080 AT1G54560.2 63.403 1522 544 5 30 1539 1 1521 0.0 2019
Msa0027080 AT1G54560.1 63.445 1521 543 5 31 1539 5 1524 0.0 2019
Msa0027080 AT2G20290.3 66.932 1509 452 14 34 1540 4 1467 0.0 2016
Msa0027080 AT2G20290.4 66.535 1518 452 15 34 1540 4 1476 0.0 2011
Msa0027080 AT5G20490.2 63.403 1522 531 8 37 1539 8 1522 0.0 2011
Msa0027080 AT5G20490.1 63.403 1522 531 8 37 1539 7 1521 0.0 2009
Msa0027080 AT1G08730.2 62.516 1526 555 6 30 1539 1 1525 0.0 1959
Msa0027080 AT1G08730.1 62.648 1518 550 6 38 1539 17 1533 0.0 1954
Msa0027080 AT5G20490.3 63.636 1463 506 8 96 1539 1 1456 0.0 1929
Msa0027080 AT1G17580.1 60.562 1529 569 10 33 1541 3 1517 0.0 1894
Msa0027080 AT2G31900.4 58.077 1560 594 14 30 1539 1 1550 0.0 1841
Msa0027080 AT2G31900.1 58.077 1560 594 14 30 1539 1 1550 0.0 1841
Msa0027080 AT2G31900.2 58.040 1561 594 15 30 1539 1 1551 0.0 1836
Msa0027080 AT2G31900.5 57.607 1446 552 15 145 1539 1 1436 0.0 1672
Msa0027080 AT4G33200.1 54.479 1507 642 14 39 1526 14 1495 0.0 1607
Msa0027080 AT4G33200.4 54.377 1508 643 15 39 1526 14 1496 0.0 1602
Msa0027080 AT4G33200.2 54.225 1503 622 16 39 1526 14 1465 0.0 1593
Msa0027080 AT4G33200.3 53.683 1507 635 15 39 1526 14 1476 0.0 1570
Msa0027080 AT1G04600.1 69.822 1067 293 6 30 1069 1 1065 0.0 1514
Msa0027080 AT1G04600.1 50.310 646 247 11 952 1541 1103 1730 0.0 596
Msa0027080 AT2G33240.6 67.041 1068 347 4 38 1102 31 1096 0.0 1446
Msa0027080 AT2G33240.6 54.519 343 119 7 997 1317 1145 1472 6.11e-99 352
Msa0027080 AT2G33240.6 53.521 213 96 2 1329 1541 1560 1769 5.38e-63 238
Msa0027080 AT2G33240.4 67.041 1068 347 4 38 1102 26 1091 0.0 1446
Msa0027080 AT2G33240.4 54.519 343 119 7 997 1317 1140 1467 5.91e-99 352
Msa0027080 AT2G33240.4 53.521 213 96 2 1329 1541 1555 1764 5.45e-63 238
Msa0027080 AT2G33240.2 67.041 1068 347 4 38 1102 8 1073 0.0 1446
Msa0027080 AT2G33240.2 54.519 343 119 7 997 1317 1122 1449 5.82e-99 352
Msa0027080 AT2G33240.2 53.521 213 96 2 1329 1541 1537 1746 4.64e-63 238
Msa0027080 AT2G33240.3 67.041 1068 347 4 38 1102 26 1091 0.0 1445
Msa0027080 AT2G33240.3 54.227 343 113 8 997 1317 1140 1460 1.69e-97 348
Msa0027080 AT2G33240.3 53.521 213 96 2 1329 1541 1548 1757 5.65e-63 238
Msa0027080 AT2G33240.1 67.041 1068 347 4 38 1102 26 1091 0.0 1444
Msa0027080 AT2G33240.1 53.582 349 119 8 997 1317 1140 1473 2.00e-98 351
Msa0027080 AT2G33240.1 53.521 213 96 2 1329 1541 1561 1770 6.28e-63 238
Msa0027080 AT2G33240.8 67.041 1068 347 4 38 1102 26 1091 0.0 1444
Msa0027080 AT2G33240.8 57.012 328 119 7 997 1317 1140 1452 2.01e-102 363
Msa0027080 AT2G33240.8 53.521 213 96 2 1329 1541 1540 1749 7.13e-63 238
Msa0027080 AT2G33240.7 67.041 1068 347 4 38 1102 26 1091 0.0 1444
Msa0027080 AT2G33240.7 57.012 328 119 7 997 1317 1140 1452 2.01e-102 363
Msa0027080 AT2G33240.7 53.521 213 96 2 1329 1541 1540 1749 7.13e-63 238
Msa0027080 AT2G31900.3 54.685 1302 530 14 289 1539 1 1293 0.0 1414
Msa0027080 AT3G58160.2 65.033 898 312 2 33 930 2 897 0.0 1221
Msa0027080 AT3G58160.5 65.033 898 312 2 33 930 2 897 0.0 1220
Msa0027080 AT3G58160.1 65.033 898 312 2 33 930 2 897 0.0 1220
Msa0027080 AT3G58160.3 65.033 898 312 2 33 930 2 897 0.0 1219
Msa0027080 AT3G58160.4 65.033 898 312 2 33 930 2 897 0.0 1219
Msa0027080 AT3G19960.1 42.105 836 441 18 41 854 116 930 0.0 639
Msa0027080 AT3G19960.4 42.105 836 441 18 41 854 116 930 0.0 639
Msa0027080 AT3G19960.5 42.105 836 441 18 41 854 116 930 0.0 639
Msa0027080 AT1G50360.1 41.657 833 449 16 41 854 108 922 0.0 637
Msa0027080 AT3G19960.3 43.570 762 389 16 41 782 116 856 0.0 614
Msa0027080 AT2G33240.5 56.738 564 241 2 542 1102 1 564 0.0 591
Msa0027080 AT2G33240.5 52.342 363 124 9 997 1331 613 954 3.02e-100 351
Msa0027080 AT2G33240.5 53.521 213 96 2 1329 1541 1034 1243 1.50e-63 238
Msa0027080 AT5G54280.2 38.388 943 498 22 41 969 164 1037 0.0 585
Msa0027080 AT3G19960.2 39.792 867 427 20 41 854 116 940 0.0 577
Msa0027080 AT5G54280.1 39.686 892 455 22 92 969 25 847 0.0 573
Msa0027080 AT4G27370.2 43.759 729 380 14 92 808 167 877 1.19e-179 568
Msa0027080 AT4G27370.3 43.759 729 380 14 92 808 167 877 1.19e-179 568
Msa0027080 AT4G27370.4 43.484 729 382 14 92 808 167 877 8.54e-178 563
Msa0027080 AT4G27370.1 43.484 729 382 14 92 808 165 875 1.50e-177 563
Msa0027080 AT5G20470.1 41.441 333 135 6 906 1235 95 370 5.53e-59 214
Msa0027080 AT5G20470.1 55.333 150 66 1 1390 1539 399 547 6.24e-49 184
Msa0027080 AT5G20450.5 31.127 408 201 8 956 1355 15 350 1.84e-43 163
Msa0027080 AT5G20450.6 31.127 408 201 8 956 1355 16 351 1.94e-43 163
Msa0027080 AT5G20450.1 30.637 408 203 8 956 1355 1 336 1.42e-42 160
Msa0027080 AT5G20450.9 35.741 263 131 4 1100 1355 75 306 3.59e-42 157
Msa0027080 AT5G20450.3 35.741 263 131 4 1100 1355 76 307 3.94e-42 157
Msa0027080 AT5G20450.7 39.013 223 98 4 1140 1355 94 285 7.64e-42 156
Msa0027080 AT5G20450.8 39.013 223 98 4 1140 1355 94 285 7.64e-42 156
Msa0027080 AT5G20450.11 34.615 286 144 5 1082 1355 75 329 9.11e-42 157
Msa0027080 AT5G20450.12 34.615 286 144 5 1082 1355 75 329 9.11e-42 157
Msa0027080 AT5G20450.2 34.615 286 144 5 1082 1355 75 329 9.11e-42 157
Msa0027080 AT5G20450.10 30.846 402 198 9 963 1356 1 330 3.27e-41 157
Msa0027080 AT1G42680.1 60.714 84 27 1 184 267 56 133 1.37e-27 111
Msa0027080 AT5G20450.4 36.306 157 89 2 1082 1227 75 231 1.21e-26 111

Find 336 sgRNAs with CRISPR-Local

Find 1089 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCAGAAGGGAAGAATTTC+TGG 0.125265 1_1:-51335326 Msa0027080:CDS
TTGGAGAAGGTTGGACTTAA+AGG 0.198248 1_1:-51329146 Msa0027080:CDS
TACCGCTTGCAAGCGGATTT+TGG 0.199542 1_1:-51329165 Msa0027080:CDS
TTCAATAGGTTCCCGGTTTA+AGG 0.208932 1_1:-51329733 Msa0027080:intron
TGCTGGCTTGAGAAGATTAT+TGG 0.211075 1_1:+51329552 None:intergenic
TGTTGACAATCAAGATATTC+TGG 0.220509 1_1:-51332962 Msa0027080:CDS
AAACAGTGATAATTCCTTTC+AGG 0.223738 1_1:+51335248 None:intergenic
ATCGGCGTGCTGGATATTTA+TGG 0.235798 1_1:-51334012 Msa0027080:CDS
CGGCTCAGTGTAGCAGCTTC+TGG 0.242852 1_1:+51334247 None:intergenic
TACATTTATCATAGTCATTA+AGG 0.244753 1_1:-51320421 Msa0027080:three_prime_UTR
ACAGAGTATGCACACTTTAC+TGG 0.267586 1_1:-51321112 Msa0027080:CDS
GGCGAGGTCTTGGAGGTTAA+TGG 0.274346 1_1:-51336698 Msa0027080:CDS
GAGGAAAGTTCGCTCCTATT+TGG 0.277082 1_1:-51328527 Msa0027080:CDS
AAGACAGGCAGTTGGATTCT+TGG 0.281016 1_1:-51322608 Msa0027080:intron
TGAAGATAAATTCTTAGATA+TGG 0.289268 1_1:-51325834 Msa0027080:CDS
CTCCAGAAATTCTTCCCTTC+TGG 0.294981 1_1:+51335324 None:intergenic
CTCGCTGTGAGCTGCGCTTT+AGG 0.295154 1_1:-51328193 Msa0027080:CDS
TTAAACCAGAATCACGAAAA+TGG 0.301288 1_1:+51320139 None:intergenic
AATATCCAGCACGCCGATTA+AGG 0.303705 1_1:+51334017 None:intergenic
TTTAGATAATGAAATGTTCT+TGG 0.313319 1_1:+51334793 None:intergenic
GAAGTCACTGCGTGACAATT+TGG 0.318630 1_1:+51330096 None:intergenic
TTCAAGCATGAAGGTACTTA+TGG 0.320626 1_1:-51320970 Msa0027080:CDS
AAAACTTCGGCGGGCCAAAT+AGG 0.326707 1_1:+51328513 None:intergenic
CCAAAGAGGGATGTCGGATT+TGG 0.327858 1_1:+51324368 None:intergenic
CAGTGCAGCTATTATCATTC+AGG 0.329864 1_1:-51328162 Msa0027080:intron
ATGAATTTGTGGATCGATTT+GGG 0.332454 1_1:-51329314 Msa0027080:CDS
GATGAATTTGTGGATCGATT+TGG 0.333461 1_1:-51329315 Msa0027080:CDS
GTTGTTCAGAAATACAAATT+AGG 0.338186 1_1:-51334820 Msa0027080:CDS
ATCATTGATGATTTCATCAT+AGG 0.338194 1_1:+51321618 None:intergenic
AGACGTTCAAGAACCATAAA+AGG 0.338813 1_1:-51330129 Msa0027080:CDS
TAAGGCTGGTTTAGCAGAAT+TGG 0.339731 1_1:-51322988 Msa0027080:CDS
ACGTTTGAGAGAAGATCTTT+TGG 0.341806 1_1:+51323190 None:intergenic
TCAAGATGACAATGATCTTA+TGG 0.343948 1_1:-51324486 Msa0027080:CDS
TCAGAGTGATTCTTTCTTGT+TGG 0.344912 1_1:-51320928 Msa0027080:CDS
TATTGTTGGTGCCCAGGTTT+GGG 0.345315 1_1:-51336750 Msa0027080:CDS
CTTTATATTGCGCCATCATA+TGG 0.347710 1_1:+51336028 None:intergenic
CAGAATCTGATAGCAAATTA+AGG 0.348649 1_1:-51325462 Msa0027080:CDS
TTTCATAACACAATTGATAA+GGG 0.350960 1_1:+51325319 None:intergenic
TTGAGAGTTTCAAGACTAAC+AGG 0.354776 1_1:-51333987 Msa0027080:intron
TTATCAAACTGATTTATTCC+TGG 0.355172 1_1:-51329877 Msa0027080:CDS
GTCTTGGGTTTGCAGTATGC+TGG 0.355845 1_1:-51322658 Msa0027080:intron
GCGAGGTCTTGGAGGTTAAT+GGG 0.356212 1_1:-51336697 Msa0027080:CDS
ACCCGATACAAAGGGGCATT+TGG 0.356899 1_1:+51329803 None:intergenic
GCTTATGTGGAGAAAATATA+TGG 0.357314 1_1:-51324151 Msa0027080:CDS
TGTGACTTCTGCAGTCGTTT+TGG 0.357491 1_1:-51335371 Msa0027080:intron
TCTTGTTGGACGATACTTCC+AGG 0.363306 1_1:-51320914 Msa0027080:intron
AAAGTTTCATTTGTTGATCT+AGG 0.364034 1_1:+51330169 None:intergenic
CACTCCTATTGTTGGTGCCC+AGG 0.365268 1_1:-51336756 Msa0027080:CDS
TATCTGCAGAAGTTGGAAAA+TGG 0.366051 1_1:-51325647 Msa0027080:intron
GCTTCTTGCACCCGAAGCTT+TGG 0.369381 1_1:-51329292 Msa0027080:CDS
CTTCAACAAAGTTTAAAATC+TGG 0.373850 1_1:-51324425 Msa0027080:CDS
TTAATGTTCAACTCTTCAAT+AGG 0.375656 1_1:-51323158 Msa0027080:intron
ATAAAAGTCCTTTGTACTTC+AGG 0.377967 1_1:-51336668 Msa0027080:CDS
CTATTGTTGGTGCCCAGGTT+TGG 0.378445 1_1:-51336751 Msa0027080:CDS
TGCAGTATGCTGGGACATCT+TGG 0.379533 1_1:-51322648 Msa0027080:intron
TTTCCAAAGGCTTCTAGAAC+AGG 0.380411 1_1:+51335516 None:intergenic
CATATGATGGCGCAATATAA+AGG 0.380472 1_1:-51336027 Msa0027080:CDS
CCGATTAAGGACTTCGAGTC+AGG 0.381387 1_1:+51334030 None:intergenic
GATAAAATTAACAATTCAAT+TGG 0.383218 1_1:-51334060 Msa0027080:CDS
GTGGAGAAGACATTTGTAAA+TGG 0.384716 1_1:+51325256 None:intergenic
GCTGGCTTGAGAAGATTATT+GGG 0.388586 1_1:+51329553 None:intergenic
CTTTCTGATCTTCTACCATA+TGG 0.388713 1_1:+51325621 None:intergenic
AAACCTGATTAAAATGTTGC+TGG 0.389500 1_1:+51333416 None:intergenic
CCAAATCCGACATCCCTCTT+TGG 0.389779 1_1:-51324368 Msa0027080:CDS
ACAAGAAAGAGGAGATTGAT+TGG 0.391323 1_1:-51332999 Msa0027080:CDS
TCTGATGTAGCTTGGATAGA+TGG 0.392466 1_1:-51336719 Msa0027080:CDS
TCCTTTCAGGATCCGACAAC+TGG 0.394585 1_1:+51335261 None:intergenic
CCTCTTTGGAAGAATGACTA+TGG 0.400068 1_1:-51324354 Msa0027080:intron
GGTTGGACTTAAAGGATATC+AGG 0.403621 1_1:-51329138 Msa0027080:intron
GATCGCCTTATCCAGATGAT+TGG 0.405064 1_1:-51325197 Msa0027080:CDS
ACTTGTAGAAGTGAGATATT+AGG 0.405567 1_1:-51328571 Msa0027080:CDS
TCCAAATGCCCCTTTGTATC+GGG 0.409031 1_1:-51329804 Msa0027080:CDS
AATCCTGTTCTAGAAGCCTT+TGG 0.410236 1_1:-51335519 Msa0027080:CDS
TAAATGGTGAACGCGGCAAC+AGG 0.412144 1_1:+51325272 None:intergenic
CAATATAAAGGAGCAGGCTT+TGG 0.413967 1_1:-51336015 Msa0027080:CDS
TGGTGCCCAGGTTTGGGTGG+AGG 0.415137 1_1:-51336744 Msa0027080:CDS
CAACCTTCCTGCCCCGTTGG+AGG 0.415662 1_1:-51324230 Msa0027080:CDS
AGGTTATTCATCAGAAGTAT+AGG 0.421484 1_1:-51321645 Msa0027080:CDS
TCACGCAGTGACTTCACAAT+TGG 0.422123 1_1:-51330088 Msa0027080:CDS
CAAGCTGCAGCCTCAATGTA+AGG 0.422384 1_1:+51326752 None:intergenic
TACCTACGATCCAAAGCTTC+GGG 0.422888 1_1:+51329282 None:intergenic
AAGTCACTGCGTGACAATTT+GGG 0.422969 1_1:+51330097 None:intergenic
GCTGCTTACAATTGTGTTTG+TGG 0.422974 1_1:-51320082 Msa0027080:three_prime_UTR
AACTTACATCGCCAGCATAA+TGG 0.423074 1_1:+51330065 None:intergenic
CACAATTTACCTCATATACA+TGG 0.425347 1_1:+51325735 None:intergenic
GGGAATCAGCCAGTCAATAT+TGG 0.428085 1_1:-51335830 Msa0027080:CDS
GAAAATATATGGCATCTTGC+GGG 0.428697 1_1:-51324140 Msa0027080:CDS
TTAGATAATGAAATGTTCTT+GGG 0.428985 1_1:+51334794 None:intergenic
GAGGTTCCTGTTGTTGATCA+TGG 0.429118 1_1:-51326304 Msa0027080:CDS
ACCAAAGTGTTTCTTAGAGC+TGG 0.429448 1_1:-51328613 Msa0027080:CDS
TTGGATAGATGGCGAGGTCT+TGG 0.430012 1_1:-51336708 Msa0027080:CDS
CAGAATCCTCCACCCAAACC+TGG 0.430172 1_1:+51336738 None:intergenic
ACTTGCTCGGCAAGTATATG+AGG 0.431499 1_1:-51328342 Msa0027080:CDS
TCGGCTATTTCTATTCAAAC+TGG 0.432892 1_1:-51328233 Msa0027080:CDS
TGCCAACCTTCCTGCCCCGT+TGG 0.433570 1_1:-51324233 Msa0027080:CDS
TTCCAAATGCCCCTTTGTAT+CGG 0.434128 1_1:-51329805 Msa0027080:CDS
CAAACCTGGGCACCAACAAT+AGG 0.434344 1_1:+51336752 None:intergenic
ATCACGTGTTTGCCAGTTGT+CGG 0.435611 1_1:-51335273 Msa0027080:CDS
ATTTATTTCATTATGTATCC+AGG 0.436211 1_1:-51324092 Msa0027080:intron
GAGCCACTGCCGGAGATACT+TGG 0.438528 1_1:-51327982 Msa0027080:CDS
CCTTGCGTACAACCTCCAAC+GGG 0.441305 1_1:+51324218 None:intergenic
TATGCGCTATCTTGCTTACA+TGG 0.442830 1_1:-51335761 Msa0027080:CDS
TTCACAATTGGCCATTATGC+TGG 0.443247 1_1:-51330076 Msa0027080:CDS
ACTGCTGCCACTCCTATTGT+TGG 0.445327 1_1:-51336764 Msa0027080:CDS
AAGGCAACGAAATCCGTTGC+TGG 0.445838 1_1:-51320398 Msa0027080:three_prime_UTR
CATAATCTTTGTTCTTGTCC+AGG 0.449444 1_1:+51329859 None:intergenic
AACTAAGTCATTGCTTCAAA+AGG 0.450190 1_1:-51326374 Msa0027080:CDS
GAGAGGTCATCAACTGAGAA+TGG 0.452152 1_1:+51320555 None:intergenic
ACAATGATCTTATGGCCTAT+TGG 0.453103 1_1:-51324478 Msa0027080:CDS
CTATTGCTGACGCAGCATAT+AGG 0.453159 1_1:-51335969 Msa0027080:intron
CCTGACTCGAAGTCCTTAAT+CGG 0.453337 1_1:-51334030 Msa0027080:CDS
TGTTGTTGATCATGGTTTGA+TGG 0.453887 1_1:-51326296 Msa0027080:CDS
TTCAAACCACATGAAATTTG+TGG 0.453955 1_1:-51336943 None:intergenic
ATACCTACGATCCAAAGCTT+CGG 0.453969 1_1:+51329281 None:intergenic
AGAAAGGTTGAAGCAAGCTT+TGG 0.454734 1_1:-51326061 Msa0027080:CDS
CAGAGTATGCACACTTTACT+GGG 0.456013 1_1:-51321111 Msa0027080:CDS
AGAGAGAGTGCCTGTCATAC+AGG 0.457258 1_1:-51326326 Msa0027080:CDS
TCCTCTCCATGCACATTGGG+TGG 0.457632 1_1:+51327920 None:intergenic
AAACCGAAAACCAGGTTCTT+CGG 0.459614 1_1:-51325811 Msa0027080:CDS
TTTACAAATGTCTTCTCCAC+TGG 0.461189 1_1:-51325253 Msa0027080:CDS
TCAAACCACATGAAATTTGT+GGG 0.461308 1_1:-51336942 None:intergenic
AATGAGGAAGCTTTATGAAA+GGG 0.462978 1_1:+51336061 None:intergenic
TATTCTGGATCTCATTGAAA+AGG 0.463006 1_1:-51332947 Msa0027080:intron
ATATTCATCTTTCAGAAACC+TGG 0.465768 1_1:-51330382 Msa0027080:intron
TGTACACGAGGTTGTTTGAT+TGG 0.466172 1_1:-51334204 Msa0027080:intron
CTCCAACGGGGCAGGAAGGT+TGG 0.467842 1_1:+51324231 None:intergenic
TATCAGGCTGCAAGAGAAAC+CGG 0.468256 1_1:-51326820 Msa0027080:intron
ATCAAACCATGATCAACAAC+AGG 0.468495 1_1:+51326298 None:intergenic
TCAAACAAATTGCTATGAGT+TGG 0.468711 1_1:-51334770 Msa0027080:CDS
TCTTTAAGTTCATAAAATGA+TGG 0.470037 1_1:+51327955 None:intergenic
AGGGTGTCATGGAGGCAATC+AGG 0.470622 1_1:-51329374 Msa0027080:CDS
CAATTGCCGAACCAATCATC+TGG 0.470993 1_1:+51325186 None:intergenic
GCCACGCAATGCAGGGACAC+AGG 0.471913 1_1:+51320272 None:intergenic
CACCACTAACCAATATTGAC+TGG 0.472994 1_1:+51335821 None:intergenic
ACAAATAAACCCGATACAAA+GGG 0.473184 1_1:+51329795 None:intergenic
ATAACCTAAAAGATTGTCTC+AGG 0.475827 1_1:+51336904 None:intergenic
TTAATACCTCCTCCTTTGCT+TGG 0.476816 1_1:+51322952 None:intergenic
TGATTTATTAGATGATTCCT+CGG 0.477356 1_1:+51329764 None:intergenic
GTGTAGCAGCTTCTGGATCC+AGG 0.480450 1_1:+51334254 None:intergenic
AAAGGCTTCTAGAACAGGAT+TGG 0.480808 1_1:+51335521 None:intergenic
ATTAGATGATTCCTCGGGTG+AGG 0.481155 1_1:+51329770 None:intergenic
CCGAACCAATCATCTGGATA+AGG 0.482641 1_1:+51325192 None:intergenic
AGGAGAGCAATGGATGTTGT+TGG 0.483886 1_1:-51334712 Msa0027080:CDS
GCAGTATGCTGGGACATCTT+GGG 0.484462 1_1:-51322647 Msa0027080:intron
AAGAGGGATGTCGGATTTGG+TGG 0.485881 1_1:+51324371 None:intergenic
CCTTTCAACCCATGTATATG+AGG 0.487795 1_1:-51325744 Msa0027080:intron
GCAGGAAGGTTGGCAGAAGA+AGG 0.488618 1_1:+51324241 None:intergenic
GATGATTGGTTCGGCAATTG+AGG 0.488932 1_1:-51325183 Msa0027080:intron
CCTTATCCAGATGATTGGTT+CGG 0.489073 1_1:-51325192 Msa0027080:CDS
AAGATTCTCCCATGGGTCAC+TGG 0.490252 1_1:-51323399 Msa0027080:CDS
ATACAGAAGTGCTTGATGTT+CGG 0.492362 1_1:+51329830 None:intergenic
GAGACTGTTGCCGAAGAACC+TGG 0.492575 1_1:+51325801 None:intergenic
TGAAACTATTGTTAAATGCC+TGG 0.494069 1_1:-51334272 Msa0027080:CDS
TCAGCAATAGCAAAAGGATG+TGG 0.494934 1_1:+51335982 None:intergenic
GCAATCAGGATAAGCTGCGC+TGG 0.496367 1_1:-51329360 Msa0027080:CDS
TCAAAAGGAGTCTTAAGATC+TGG 0.496791 1_1:-51323436 Msa0027080:CDS
AGTGCAGAGAAGGGTGTTGA+GGG 0.497088 1_1:+51323360 None:intergenic
TTCTCGAGAAGCTCATCTGC+TGG 0.500689 1_1:+51320495 None:intergenic
GTTTCTTAGAGCTGGTCAAA+TGG 0.501593 1_1:-51328605 Msa0027080:CDS
CGGCAACAGGCTTTCCATGA+TGG 0.502312 1_1:+51325285 None:intergenic
GCAACAGCTCACGGCTTATG+TGG 0.503865 1_1:-51324164 Msa0027080:CDS
AGACGTATTTGACAGCCAAT+AGG 0.504654 1_1:+51324463 None:intergenic
TTGCTCTTCTCGATGAAGCT+TGG 0.506344 1_1:-51330351 Msa0027080:intron
GATGGTGTGCCAAGTATCTC+CGG 0.506797 1_1:+51327973 None:intergenic
TTGTGTATACATGAAAAGTT+CGG 0.507109 1_1:+51334442 None:intergenic
TGTTGGTGCCCAGGTTTGGG+TGG 0.507531 1_1:-51336747 Msa0027080:CDS
TCTTGGGTTTGCAGTATGCT+GGG 0.509342 1_1:-51322657 Msa0027080:intron
CCGCATGCATATTGCTAGGA+AGG 0.509639 1_1:-51328276 Msa0027080:CDS
ACATCAGAGCCACGCAATGC+AGG 0.510002 1_1:+51320264 None:intergenic
GTTGGAAAATGGTCACCATA+TGG 0.510192 1_1:-51325636 Msa0027080:CDS
GATAGATGGCGAGGTCTTGG+AGG 0.511971 1_1:-51336705 Msa0027080:CDS
GTTAGTGGTGAAAGTGGGGC+TGG 0.512547 1_1:-51335808 Msa0027080:CDS
GAAGTCCTTAATCGGCGTGC+TGG 0.512624 1_1:-51334022 Msa0027080:CDS
GACAAATAAACCCGATACAA+AGG 0.513966 1_1:+51329794 None:intergenic
CCTCATATACATGGGTTGAA+AGG 0.514601 1_1:+51325744 None:intergenic
AACGGAGAATATGTTAAGGC+TGG 0.515376 1_1:-51323002 Msa0027080:CDS
CTGAATGATAATAGCTGCAC+TGG 0.515975 1_1:+51328163 None:intergenic
GATTTATTAGATGATTCCTC+GGG 0.516693 1_1:+51329765 None:intergenic
AGCCAGTCAATATTGGTTAG+TGG 0.519719 1_1:-51335823 Msa0027080:CDS
ACCAGCTCTAAGAAACACTT+TGG 0.521214 1_1:+51328612 None:intergenic
AACTGTCGAGCAGAAAGTCC+TGG 0.521877 1_1:-51335710 Msa0027080:CDS
TTTATCCAGGTGTGATGCAA+AGG 0.523049 1_1:-51334338 Msa0027080:intron
CTGTTAGAAACAATAATTCA+AGG 0.523428 1_1:-51335485 Msa0027080:intron
GCAGACCTTGGTGAGCTCAC+TGG 0.523435 1_1:-51326139 Msa0027080:intron
TGTCTTCTTGTAGGGTGTCA+TGG 0.523460 1_1:-51329385 Msa0027080:intron
TTTATATGATAGCCATATGA+TGG 0.523600 1_1:-51336040 Msa0027080:CDS
TCTCTTTCATAGTGCAGAGA+AGG 0.523964 1_1:+51323350 None:intergenic
TTAGATGATTCCTCGGGTGA+GGG 0.527271 1_1:+51329771 None:intergenic
TGCTATCAGAACTTACCTGC+TGG 0.529866 1_1:-51335300 Msa0027080:CDS
ATCTTGATCTCAGATTATCT+AGG 0.530080 1_1:+51336238 None:intergenic
CGCTATCTTGCTTACATGGG+AGG 0.530838 1_1:-51335757 Msa0027080:CDS
AAATGAGGAAGCTTTATGAA+AGG 0.531821 1_1:+51336060 None:intergenic
AACAGTCTTTGCATTTCCAA+AGG 0.532637 1_1:+51335503 None:intergenic
GCAAGAAGAATACAAGAAAG+AGG 0.532849 1_1:-51333010 Msa0027080:CDS
CCACGCAATGCAGGGACACA+GGG 0.533586 1_1:+51320273 None:intergenic
AATCGAGACAAAACTTCGGC+GGG 0.534229 1_1:+51328504 None:intergenic
CATAGTCATTCTTCCAAAGA+GGG 0.534902 1_1:+51324355 None:intergenic
TTTGGCAGCTTGGAGAGCTC+CGG 0.535571 1_1:+51326801 None:intergenic
AGAGGTCATCAACTGAGAAT+GGG 0.536100 1_1:+51320556 None:intergenic
TTTAGTAAAGATTCTCCCAT+GGG 0.536947 1_1:-51323406 Msa0027080:CDS
TGTTGCTTGAAAAGCAAAGC+AGG 0.537389 1_1:+51324181 None:intergenic
AGTTGAAAACTTCTATGCAA+AGG 0.538535 1_1:-51326017 Msa0027080:intron
CAACAAAGTTTAAAATCTGG+TGG 0.539723 1_1:-51324422 Msa0027080:CDS
ACAGGAACCTCCTGTATGAC+AGG 0.540124 1_1:+51326316 None:intergenic
GGAGATTCAATTTGACCAGA+AGG 0.541138 1_1:-51335339 Msa0027080:CDS
CAGGCCCCAAGAACATCAAA+AGG 0.541333 1_1:-51323451 Msa0027080:CDS
CAGCAACGGAGAATATGTTA+AGG 0.542689 1_1:-51323006 Msa0027080:CDS
CGTTGCTGGTCCTTGCATAG+TGG 0.544019 1_1:-51320384 Msa0027080:three_prime_UTR
CTAATAAAATCAGTGAAGAA+AGG 0.544685 1_1:-51326077 Msa0027080:CDS
CCCGTTGGAGGTTGTACGCA+AGG 0.544883 1_1:-51324218 Msa0027080:CDS
CTTGCTTACCTGCATGAACC+TGG 0.545072 1_1:-51336264 Msa0027080:CDS
CGTACAACCTCCAACGGGGC+AGG 0.546432 1_1:+51324223 None:intergenic
GCTGCGTCAGCAATAGCAAA+AGG 0.546834 1_1:+51335976 None:intergenic
ACCTTGCGTACAACCTCCAA+CGG 0.547959 1_1:+51324217 None:intergenic
ATGGCGCAATATAAAGGAGC+AGG 0.548950 1_1:-51336021 Msa0027080:CDS
GCCAGTTGTCGGATCCTGAA+AGG 0.549667 1_1:-51335262 Msa0027080:CDS
TTAAAGAATATTGTGATACA+AGG 0.550090 1_1:-51334732 Msa0027080:CDS
TATTGGTTAGTGGTGAAAGT+GGG 0.553780 1_1:-51335813 Msa0027080:CDS
CTCTTTCATAGTGCAGAGAA+GGG 0.554844 1_1:+51323351 None:intergenic
CCATAGTCATTCTTCCAAAG+AGG 0.555244 1_1:+51324354 None:intergenic
TTTGAATGAGTAGGCGGCAA+GGG 0.555319 1_1:-51320457 Msa0027080:exon
GTTGAAAGGTGCTCTGACAT+TGG 0.555561 1_1:+51325758 None:intergenic
CTCAGATTATCTAGGACACC+AGG 0.555744 1_1:+51336246 None:intergenic
CCCTGTGTCCCTGCATTGCG+TGG 0.556674 1_1:-51320273 Msa0027080:three_prime_UTR
TCAGGTCCTTTCAAGCATGA+AGG 0.556999 1_1:-51320979 Msa0027080:intron
TAAGTACCTTCATGCTTGAA+AGG 0.557445 1_1:+51320973 None:intergenic
CACCCGAAGCTTTGGATCGT+AGG 0.558500 1_1:-51329284 Msa0027080:intron
GTGCCAAGTATCTCCGGCAG+TGG 0.559903 1_1:+51327979 None:intergenic
GTTTAGCAGAATTGGAGCTA+TGG 0.560007 1_1:-51322980 Msa0027080:CDS
CCGCTTCAAATGATTTCCAG+TGG 0.560699 1_1:+51325237 None:intergenic
CATGAAGGTACTTATGGCTG+AGG 0.562908 1_1:-51320964 Msa0027080:CDS
CTCCAAAATCCGCTTGCAAG+CGG 0.564351 1_1:+51329163 None:intergenic
TGGAGGATTCTGATGTAGCT+TGG 0.565012 1_1:-51336727 Msa0027080:CDS
ACAAATTGCTATGAGTTGGA+TGG 0.567070 1_1:-51334766 Msa0027080:CDS
CAATTGCCACCCAATGTGCA+TGG 0.567972 1_1:-51327926 Msa0027080:CDS
CAATCTTAGCTAAAGCGTCT+CGG 0.567973 1_1:+51334227 None:intergenic
GATACTCTGCCAGTGACCCA+TGG 0.567986 1_1:+51323390 None:intergenic
CACTATGCAAGGACCAGCAA+CGG 0.568510 1_1:+51320385 None:intergenic
TATCATCCACTCCACATGGT+GGG 0.569021 1_1:+51336295 None:intergenic
TGTATCTTTATGATAAACAC+TGG 0.569317 1_1:+51336323 None:intergenic
TAGTGCAGAGAAGGGTGTTG+AGG 0.572666 1_1:+51323359 None:intergenic
TCTATTCAAACTGGTATGCG+AGG 0.573436 1_1:-51328224 Msa0027080:CDS
GTGTATTGCAGAGCCACTGC+CGG 0.573990 1_1:-51327992 Msa0027080:intron
CATGATAAACAAGATGCAGC+AGG 0.575265 1_1:+51320297 None:intergenic
CTATTCAAACTGGTATGCGA+GGG 0.575597 1_1:-51328223 Msa0027080:CDS
GTTTCCGCATGCATATTGCT+AGG 0.577865 1_1:-51328280 Msa0027080:CDS
TTTATCATAGTCATTAAGGA+AGG 0.579217 1_1:-51320417 Msa0027080:three_prime_UTR
AGAAGAGCAATAATGCCTCC+AGG 0.579459 1_1:+51330364 None:intergenic
TTACACAGCAAAACAAAATG+TGG 0.580432 1_1:+51320045 None:intergenic
ATCATCCACTCCACATGGTG+GGG 0.581876 1_1:+51336296 None:intergenic
ATAACCAACCAACATCTGCT+TGG 0.581888 1_1:+51336857 None:intergenic
TCAGGAAGCTATATTTCAAG+TGG 0.583996 1_1:-51334570 Msa0027080:intron
AGAAATTCAATTACCTCTGG+AGG 0.584580 1_1:+51335206 None:intergenic
ATACTCTGCCAGTGACCCAT+GGG 0.585235 1_1:+51323391 None:intergenic
TAAACAAATGTAGGTTGACA+TGG 0.586137 1_1:-51326467 Msa0027080:intron
ATTCTTCCAAAGAGGGATGT+CGG 0.586276 1_1:+51324362 None:intergenic
CATGGAGAGGAAAAGTTGCT+CGG 0.587114 1_1:-51327908 Msa0027080:CDS
AGAAAATATATGGCATCTTG+CGG 0.587597 1_1:-51324141 Msa0027080:CDS
CTAGGACACCAGGTTCATGC+AGG 0.588573 1_1:+51336256 None:intergenic
CAATCAGGATAAGCTGCGCT+GGG 0.588945 1_1:-51329359 Msa0027080:CDS
ATATTGGTTAGTGGTGAAAG+TGG 0.590795 1_1:-51335814 Msa0027080:CDS
AAATTGACGAAACAGAGAAA+AGG 0.592188 1_1:-51326110 Msa0027080:CDS
GCTATGGTGCTGCCAAGCAA+AGG 0.592345 1_1:-51322964 Msa0027080:CDS
TAGATGATTCCTCGGGTGAG+GGG 0.592431 1_1:+51329772 None:intergenic
TCAAACTGGTATGCGAGGGA+TGG 0.593631 1_1:-51328219 Msa0027080:CDS
TCTCTTGCAGTGAGGTAGAG+AGG 0.594446 1_1:+51320538 None:intergenic
AACAATAGGAGTGGCAGCAG+TGG 0.595032 1_1:+51336766 None:intergenic
CCACTGGAAATCATTTGAAG+CGG 0.596102 1_1:-51325237 Msa0027080:CDS
AACAGAGAAAAGGTATGAAG+AGG 0.596526 1_1:-51326100 Msa0027080:CDS
AGATATGGAAACCGAAAACC+AGG 0.598353 1_1:-51325819 Msa0027080:CDS
CGAGGTCTTGGAGGTTAATG+GGG 0.599706 1_1:-51336696 Msa0027080:CDS
TTTATTTGTCCCCTCACCCG+AGG 0.599801 1_1:-51329781 Msa0027080:CDS
TTGTGATACAAGGAGAGCAA+TGG 0.600358 1_1:-51334722 Msa0027080:CDS
GTATATACAACCACTATGCA+AGG 0.604247 1_1:+51320374 None:intergenic
AATGGACTCGTCTACGCCCA+AGG 0.604939 1_1:-51334498 Msa0027080:CDS
TGAGCTCAAACACATAAGAC+AGG 0.605750 1_1:-51322623 Msa0027080:CDS
AGAAGCCCCACCATGTGGAG+TGG 0.606638 1_1:-51336301 Msa0027080:CDS
ATGGTGCTGCCAAGCAAAGG+AGG 0.606939 1_1:-51322961 Msa0027080:CDS
TGTAGGCTTATGATCAATGA+GGG 0.607412 1_1:-51335850 Msa0027080:intron
GGCAAGTATATGAGGGATTG+CGG 0.610287 1_1:-51328334 Msa0027080:CDS
CACATGTTGACGTTCAATGT+AGG 0.611021 1_1:+51325435 None:intergenic
CAGCAATAGCAAAAGGATGT+GGG 0.613243 1_1:+51335983 None:intergenic
ATGCGCTATCTTGCTTACAT+GGG 0.613522 1_1:-51335760 Msa0027080:CDS
AAACACGTGATCTTTCCAGC+AGG 0.613589 1_1:+51335285 None:intergenic
GATTGTTGCACATTCAGCAA+CGG 0.614400 1_1:-51323020 Msa0027080:CDS
TCACGAAAATGGACATACAA+AGG 0.617518 1_1:+51320150 None:intergenic
TACAGACACCAAGCAGATGT+TGG 0.618077 1_1:-51336865 Msa0027080:intron
CATCAGAGCCACGCAATGCA+GGG 0.619259 1_1:+51320265 None:intergenic
AGAATCCTCCACCCAAACCT+GGG 0.619902 1_1:+51336739 None:intergenic
TGATTGGCAGTCTTCTTCTG+CGG 0.623240 1_1:-51323046 Msa0027080:intron
AAAATCACCAACCTTAAACC+GGG 0.623604 1_1:+51329722 None:intergenic
AAACACATAAGACAGGCAGT+TGG 0.625446 1_1:-51322616 Msa0027080:CDS
ACAATTTACCTCATATACAT+GGG 0.627260 1_1:+51325736 None:intergenic
GCTATCTTGCTTACATGGGA+GGG 0.629182 1_1:-51335756 Msa0027080:CDS
ATGAGGTTACCGCTTGCAAG+CGG 0.629474 1_1:-51329172 Msa0027080:CDS
CAACCTCCAACGGGGCAGGA+AGG 0.630374 1_1:+51324227 None:intergenic
GAGATTCAATTTGACCAGAA+GGG 0.630766 1_1:-51335338 Msa0027080:CDS
GTGCTGCCAAGCAAAGGAGG+AGG 0.631182 1_1:-51322958 Msa0027080:intron
GATACAGAAGCCCCACCATG+TGG 0.631325 1_1:-51336306 Msa0027080:CDS
ATATAAAGAATTGTACAGCT+CGG 0.632269 1_1:-51328252 Msa0027080:CDS
CTTCTAGTCTGATCATTCAG+AGG 0.633025 1_1:-51328304 Msa0027080:CDS
ATATGGCTATCATATAAATG+AGG 0.633630 1_1:+51336045 None:intergenic
ATATGAGGGATTGCGGCAAG+AGG 0.636875 1_1:-51328327 Msa0027080:CDS
GCCACCCAATGTGCATGGAG+AGG 0.639049 1_1:-51327921 Msa0027080:CDS
AGTCAGCAAGCATTATTCAG+AGG 0.639109 1_1:-51328546 Msa0027080:CDS
TAGTGAAAATGAGAAACTCA+AGG 0.639360 1_1:-51326263 Msa0027080:intron
CTTGCTCGGCAAGTATATGA+GGG 0.640233 1_1:-51328341 Msa0027080:CDS
TGTTCACAGGACAACTTGCT+CGG 0.641029 1_1:-51328355 Msa0027080:intron
CATTTCCAGTGAGCTCACCA+AGG 0.641092 1_1:+51326134 None:intergenic
GTCATATCATCCACTCCACA+TGG 0.641948 1_1:+51336291 None:intergenic
GGGAGAGCTAATGCTGCTGA+AGG 0.644050 1_1:-51335736 Msa0027080:CDS
TTCATCTTTCAGAAACCTGG+AGG 0.645189 1_1:-51330379 Msa0027080:intron
CAGTTACAAGCTGCATGCAG+AGG 0.645880 1_1:-51328466 Msa0027080:intron
GCTTTGTGCTGCACCTCCAG+AGG 0.647261 1_1:-51335219 Msa0027080:intron
TAGCTAAGATTGTGTACACG+AGG 0.650614 1_1:-51334216 Msa0027080:CDS
ATGTAGGCTTATGATCAATG+AGG 0.650995 1_1:-51335851 Msa0027080:intron
GAATCGAGACAAAACTTCGG+CGG 0.657729 1_1:+51328503 None:intergenic
GAGAGTGCCTGTCATACAGG+AGG 0.660255 1_1:-51326323 Msa0027080:CDS
CTTCTTGTAGGGTGTCATGG+AGG 0.661232 1_1:-51329382 Msa0027080:intron
AGCGAATCGAGACAAAACTT+CGG 0.665693 1_1:+51328500 None:intergenic
ATTGCTTCAAAAGGAGCGTG+AGG 0.667164 1_1:-51326365 Msa0027080:CDS
ATAAACAAGATGCAGCAGGA+TGG 0.667579 1_1:+51320301 None:intergenic
CTGGGCACCAACAATAGGAG+TGG 0.667703 1_1:+51336757 None:intergenic
AAGTTGAAGACCTTACATTG+AGG 0.667926 1_1:-51326762 Msa0027080:CDS
TGTATACATGAAAAGTTCGG+CGG 0.669211 1_1:+51334445 None:intergenic
CCTTCCTAGCAATATGCATG+CGG 0.673476 1_1:+51328276 None:intergenic
CAAATAAACCCGATACAAAG+GGG 0.674510 1_1:+51329796 None:intergenic
TGTAGCTTGGATAGATGGCG+AGG 0.678235 1_1:-51336714 Msa0027080:CDS
ATATCATCCACTCCACATGG+TGG 0.690765 1_1:+51336294 None:intergenic
ATTGGTTAGTGGTGAAAGTG+GGG 0.695006 1_1:-51335812 Msa0027080:CDS
ACATTTGTAAATGGTGAACG+CGG 0.701035 1_1:+51325265 None:intergenic
AAAATCTCTCTCTTGCAGTG+AGG 0.702429 1_1:+51320530 None:intergenic
TTAACACAACGAATGTAGTG+TGG 0.702536 1_1:+51329577 None:intergenic
TGTCGAGCAGAAAGTCCTGG+AGG 0.745711 1_1:-51335707 Msa0027080:intron
CTTGCGTACAACCTCCAACG+GGG 0.749585 1_1:+51324219 None:intergenic
TTTGCTTCCAGACTTACACG+GGG 0.795386 1_1:-51336104 Msa0027080:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATTTTTTTAATTTT+TGG - chr1_1:51322073-51322092 Msa0027080:intron 0.0%
!!! ATTATTTATTTATTTATTTT+TGG - chr1_1:51336186-51336205 Msa0027080:intron 0.0%
!! TATATATAAAAATGATGAAA+GGG + chr1_1:51321930-51321949 None:intergenic 10.0%
!! TTATATATAAAAATGATGAA+AGG + chr1_1:51321931-51321950 None:intergenic 10.0%
!! TAAAATATCAAGAAAAAAAA+AGG + chr1_1:51322060-51322079 None:intergenic 10.0%
!! AGTTTAATTAACAATATATT+GGG + chr1_1:51323320-51323339 None:intergenic 10.0%
!! TAGTTTAATTAACAATATAT+TGG + chr1_1:51323321-51323340 None:intergenic 10.0%
!! TCTCTAATAATTAAATAAAT+AGG + chr1_1:51324276-51324295 None:intergenic 10.0%
!!! GTGATTTTTATTTTATTATA+TGG - chr1_1:51324920-51324939 Msa0027080:intron 10.0%
!! ATAGAAAATAAAACTAAAAT+TGG + chr1_1:51325969-51325988 None:intergenic 10.0%
!!! TTTAGTTTTATTTTCTATTT+TGG - chr1_1:51325971-51325990 Msa0027080:intron 10.0%
!!! TGTAAACTTTTAAAATAATT+TGG - chr1_1:51329110-51329129 Msa0027080:intron 10.0%
!! ATTTATGTAAGTAAAAAAAA+AGG + chr1_1:51331054-51331073 None:intergenic 10.0%
!!! TTTTTTACTTACATAAATTT+TGG - chr1_1:51331056-51331075 Msa0027080:intron 10.0%
!!! TTTTAACATTTAATTTGAAA+TGG + chr1_1:51332069-51332088 None:intergenic 10.0%
!! TTTATTGTAAAATTAAGTAA+TGG - chr1_1:51332364-51332383 Msa0027080:intron 10.0%
!!! TTTTTATAAATAGCATAAAT+GGG + chr1_1:51333658-51333677 None:intergenic 10.0%
!!! ATTTTTATAAATAGCATAAA+TGG + chr1_1:51333659-51333678 None:intergenic 10.0%
!!! TTATGTTTTTAATAAATGAT+TGG - chr1_1:51333857-51333876 Msa0027080:intron 10.0%
!!! TGTCTTAATTATATTTTTAT+TGG - chr1_1:51335229-51335248 Msa0027080:CDS 10.0%
!!! TTTTTCATCTTATAATTTGT+AGG - chr1_1:51320558-51320577 Msa0027080:CDS 15.0%
!! TTATATTTATGATTCAATCT+AGG + chr1_1:51321830-51321849 None:intergenic 15.0%
!! ATTATTATAATTAAGCCAAA+AGG + chr1_1:51321987-51322006 None:intergenic 15.0%
!!! TTATTTTTTTAATTTTTGGC+AGG - chr1_1:51322077-51322096 Msa0027080:intron 15.0%
!!! TATTGATTATTCTTTCATTA+AGG - chr1_1:51322514-51322533 Msa0027080:intron 15.0%
!!! TTGTTTTATAATTTTTATCC+AGG - chr1_1:51322568-51322587 Msa0027080:intron 15.0%
!!! ATGACAAAATTTTACAAAAA+CGG + chr1_1:51322823-51322842 None:intergenic 15.0%
!! GATAAAATTAACAATTCAAT+TGG - chr1_1:51322859-51322878 Msa0027080:intron 15.0%
!!! TATAAATTTTATCCTGAAAA+GGG + chr1_1:51324403-51324422 None:intergenic 15.0%
!!! ATATAAATTTTATCCTGAAA+AGG + chr1_1:51324404-51324423 None:intergenic 15.0%
!!! TTTTCTTTACTAATCTTTAA+AGG - chr1_1:51324732-51324751 Msa0027080:intron 15.0%
!!! AAATTAAATTATATAACGGA+AGG + chr1_1:51324761-51324780 None:intergenic 15.0%
!!! ATCGTATATCAATTTTTTTT+TGG - chr1_1:51324821-51324840 Msa0027080:intron 15.0%
!!! TATATCAATTTTTTTTTGGA+GGG - chr1_1:51324825-51324844 Msa0027080:intron 15.0%
!! ATATATATATATGAGAGTTA+AGG + chr1_1:51325393-51325412 None:intergenic 15.0%
!!! TATTTTCTTATTTAACCTTT+AGG - chr1_1:51326132-51326151 Msa0027080:CDS 15.0%
!! ATGACATTATTATAAATTGA+TGG - chr1_1:51326254-51326273 Msa0027080:intron 15.0%
!!! AATATGATTTATTTCTACAT+TGG - chr1_1:51326983-51327002 Msa0027080:intron 15.0%
!!! ATATGTTTTTTTTGTTGTTA+TGG - chr1_1:51327884-51327903 Msa0027080:CDS 15.0%
!!! TATGTTTTTTTTGTTGTTAT+GGG - chr1_1:51327885-51327904 Msa0027080:CDS 15.0%
!! AAACTTAAAAGAATAAAGTT+TGG + chr1_1:51328009-51328028 None:intergenic 15.0%
!!! TTTAATAATGCTTTACTTTT+TGG - chr1_1:51328027-51328046 Msa0027080:intron 15.0%
!!! TTAATAATGCTTTACTTTTT+GGG - chr1_1:51328028-51328047 Msa0027080:intron 15.0%
!! TGGTAAGAATATAAAAATTA+CGG - chr1_1:51329130-51329149 Msa0027080:intron 15.0%
!! TGAATAACAAATTAAATATG+TGG + chr1_1:51330058-51330077 None:intergenic 15.0%
!!! TGAAACTTTTATTTTATATC+AGG - chr1_1:51330083-51330102 Msa0027080:CDS 15.0%
!! TAAAATAAAACAATTACAGT+TGG + chr1_1:51330237-51330256 None:intergenic 15.0%
!! TTAAGTTATTTATTGTAGTA+TGG - chr1_1:51330298-51330317 Msa0027080:intron 15.0%
!! AATTGTGTTATGAAAAATAT+TGG - chr1_1:51331608-51331627 Msa0027080:intron 15.0%
!! CTTTGTAAGAAAATAAATTA+TGG - chr1_1:51333593-51333612 Msa0027080:intron 15.0%
!! TTATACATGATATATTGTTA+TGG - chr1_1:51333682-51333701 Msa0027080:intron 15.0%
!! TATACATGATATATTGTTAT+GGG - chr1_1:51333683-51333702 Msa0027080:intron 15.0%
!!! CAATAAAAAATTCATTTTGA+CGG + chr1_1:51334554-51334573 None:intergenic 15.0%
!!! ATGAATTTTTTATTGGTTTT+AGG - chr1_1:51334559-51334578 Msa0027080:CDS 15.0%
!!! TTTCTTTTAGAATTTTTGTT+GGG - chr1_1:51334704-51334723 Msa0027080:CDS 15.0%
!! TTAGTAAACATGTAAATAAT+TGG + chr1_1:51336321-51336340 None:intergenic 15.0%
!!! TAAAATCTTCATTTTAAAGA+GGG - chr1_1:51336715-51336734 Msa0027080:CDS 15.0%
!! AAATTGCTGAAAAAAATGAA+GGG + chr1_1:51320316-51320335 None:intergenic 20.0%
!! TAAATTGCTGAAAAAAATGA+AGG + chr1_1:51320317-51320336 None:intergenic 20.0%
!! ACTGAAAATAATCATAAAAG+GGG + chr1_1:51321378-51321397 None:intergenic 20.0%
!! GACTGAAAATAATCATAAAA+GGG + chr1_1:51321379-51321398 None:intergenic 20.0%
!! TTAGATAATGAAATGTTCTT+GGG + chr1_1:51322128-51322147 None:intergenic 20.0%
!! TTTAGATAATGAAATGTTCT+TGG + chr1_1:51322129-51322148 None:intergenic 20.0%
!! TTAAAGAATATTGTGATACA+AGG - chr1_1:51322187-51322206 Msa0027080:intron 20.0%
!! TTATAAAACAAGATTTCACA+TGG + chr1_1:51322559-51322578 None:intergenic 20.0%
!! ATTATCAGTAAATCAATACA+TGG + chr1_1:51322779-51322798 None:intergenic 20.0%
!!! GTATTGATTTACTGATAATT+TGG - chr1_1:51322780-51322799 Msa0027080:intron 20.0%
!! TTGTATAGTTAATGTGTATT+AGG - chr1_1:51322978-51322997 Msa0027080:CDS 20.0%
!!! ATGTGTATTAGGTTTTATAT+TGG - chr1_1:51322989-51323008 Msa0027080:CDS 20.0%
!!! TGTGTATTAGGTTTTATATT+GGG - chr1_1:51322990-51323009 Msa0027080:CDS 20.0%
!!! AATATATTGGGTTTTATAAG+GGG + chr1_1:51323308-51323327 None:intergenic 20.0%
!!! CAATATATTGGGTTTTATAA+GGG + chr1_1:51323309-51323328 None:intergenic 20.0%
!!! ACAATATATTGGGTTTTATA+AGG + chr1_1:51323310-51323329 None:intergenic 20.0%
!!! TTCTTGTTCTTGATAATTTT+TGG - chr1_1:51323545-51323564 Msa0027080:intron 20.0%
!!! TTGATAGTAACTTAATACAA+GGG - chr1_1:51323683-51323702 Msa0027080:intron 20.0%
!! ATCCCTAATCATAAATAAAT+CGG - chr1_1:51323713-51323732 Msa0027080:intron 20.0%
!!! TATCTCTTTTTATACTAACA+AGG + chr1_1:51324449-51324468 None:intergenic 20.0%
!! TTGTTAGTATAAAAAGAGAT+AGG - chr1_1:51324448-51324467 Msa0027080:CDS 20.0%
!! TTAACATCAAATGTTTAGAT+GGG - chr1_1:51324529-51324548 Msa0027080:intron 20.0%
!! AAGATCACATTTACAAATAA+AGG + chr1_1:51324658-51324677 None:intergenic 20.0%
!! TTATTTGTAAATGTGATCTT+TGG - chr1_1:51324658-51324677 Msa0027080:intron 20.0%
!!! TTTCGTATTTTAAACATCTT+TGG - chr1_1:51324696-51324715 Msa0027080:intron 20.0%
!!! TTCGTATTTTAAACATCTTT+GGG - chr1_1:51324697-51324716 Msa0027080:intron 20.0%
!!! GTATATCAATTTTTTTTTGG+AGG - chr1_1:51324824-51324843 Msa0027080:intron 20.0%
!!! ATATCAATTTTTTTTTGGAG+GGG - chr1_1:51324826-51324845 Msa0027080:intron 20.0%
!! CTATATATATATGAGAGTTA+AGG + chr1_1:51325340-51325359 None:intergenic 20.0%
!!! CAAATTCTAAGAAATATGTT+GGG + chr1_1:51325438-51325457 None:intergenic 20.0%
!!! ACAAATTCTAAGAAATATGT+TGG + chr1_1:51325439-51325458 None:intergenic 20.0%
!! AACATATTTCTTAGAATTTG+TGG - chr1_1:51325438-51325457 Msa0027080:CDS 20.0%
!! TAAATATAGTTGCTTATCTT+AGG - chr1_1:51325619-51325638 Msa0027080:CDS 20.0%
!!! AACATGTTTTTAAAATCCAT+TGG - chr1_1:51325788-51325807 Msa0027080:CDS 20.0%
!!! AAAGTATATTGCTTTTGAAA+TGG - chr1_1:51326040-51326059 Msa0027080:CDS 20.0%
!!! AAGTATATTGCTTTTGAAAT+GGG - chr1_1:51326041-51326060 Msa0027080:CDS 20.0%
!!! ATTTTGCCATTATTCTTTAA+AGG - chr1_1:51326435-51326454 Msa0027080:CDS 20.0%
!!! AAATCAAAGTTTTCTTCAAT+AGG - chr1_1:51327172-51327191 Msa0027080:intron 20.0%
!! ATGAAAACCAAATCATATTT+CGG + chr1_1:51327240-51327259 None:intergenic 20.0%
!!! CTAATGACAAATTTTTTATC+TGG - chr1_1:51328053-51328072 Msa0027080:intron 20.0%
!!! TGAACTCTAATTTCTATTTT+TGG - chr1_1:51328211-51328230 Msa0027080:CDS 20.0%
!! AAGCATTAAAATAATTCACA+AGG + chr1_1:51328261-51328280 None:intergenic 20.0%
!!! AACGTATGTATTTTTGTTAT+TGG - chr1_1:51328818-51328837 Msa0027080:intron 20.0%
!! AGAATATAAAAATTACGGAT+AGG - chr1_1:51329135-51329154 Msa0027080:intron 20.0%
!! AAACAAGAATAATACAATCA+TGG + chr1_1:51329418-51329437 None:intergenic 20.0%
!!! AATTATTTGTGCATTTTGTT+AGG - chr1_1:51329957-51329976 Msa0027080:intron 20.0%
!!! ATTGTTTTATTTTACCAAAC+TGG - chr1_1:51330243-51330262 Msa0027080:intron 20.0%
!! AAATCTCTTTAAACAAATGT+AGG - chr1_1:51330443-51330462 Msa0027080:intron 20.0%
!! AGTAAAAAAAAAGGTCATAA+TGG + chr1_1:51331045-51331064 None:intergenic 20.0%
!!! TTACTTACATAAATTTTGGT+AGG - chr1_1:51331060-51331079 Msa0027080:intron 20.0%
!! TGAAGATAAATTCTTAGATA+TGG - chr1_1:51331085-51331104 Msa0027080:intron 20.0%
!!! TTTGAAATACGAGTTAAAAA+GGG + chr1_1:51331562-51331581 None:intergenic 20.0%
!! TTTCATAACACAATTGATAA+GGG + chr1_1:51331603-51331622 None:intergenic 20.0%
!!! TTTTCATAACACAATTGATA+AGG + chr1_1:51331604-51331623 None:intergenic 20.0%
!! GAAAAAGTTATATTGGATAA+GGG + chr1_1:51332392-51332411 None:intergenic 20.0%
!! AGAAAAAGTTATATTGGATA+AGG + chr1_1:51332393-51332412 None:intergenic 20.0%
!! ATTTATTTCATTATGTATCC+AGG - chr1_1:51332827-51332846 Msa0027080:intron 20.0%
!! TACAATTGTTTAATTGAATC+TGG - chr1_1:51332859-51332878 Msa0027080:intron 20.0%
!!! TGATTTGTATTAACAATTAG+TGG - chr1_1:51333236-51333255 Msa0027080:intron 20.0%
!!! CAAAATTTTGATAATCAATG+TGG - chr1_1:51334387-51334406 Msa0027080:intron 20.0%
!!! CGTCAAAATGAATTTTTTAT+TGG - chr1_1:51334552-51334571 Msa0027080:CDS 20.0%
!!! CTTTCTTTTAGAATTTTTGT+TGG - chr1_1:51334703-51334722 Msa0027080:CDS 20.0%
!!! TAGCTTTTCAAATAATATAC+AGG + chr1_1:51334944-51334963 None:intergenic 20.0%
!! TATTTGAAAAGCTAAACATA+AGG - chr1_1:51334950-51334969 Msa0027080:intron 20.0%
!!! TCATTATTGTCATTTTTAAC+AGG - chr1_1:51335254-51335273 Msa0027080:CDS 20.0%
!!! TTTCTTTTTATTTGTTGCTA+AGG - chr1_1:51335481-51335500 Msa0027080:intron 20.0%
!! TTTAATGTGATAAACAATCT+AGG + chr1_1:51335555-51335574 None:intergenic 20.0%
!! ATTGTTTATCACATTAAACT+TGG - chr1_1:51335557-51335576 Msa0027080:intron 20.0%
!! TACATTTATCATAGTCATTA+AGG - chr1_1:51336498-51336517 Msa0027080:intron 20.0%
!!! GTAAAATCTTCATTTTAAAG+AGG - chr1_1:51336714-51336733 Msa0027080:CDS 20.0%
!!! AAAATCTTCATTTTAAAGAG+GGG - chr1_1:51336716-51336735 Msa0027080:CDS 20.0%
!! GTTATGCATTCATTTTATCA+GGG - chr1_1:51320080-51320099 Msa0027080:three_prime_UTR 25.0%
! TGTATCTTTATGATAAACAC+TGG + chr1_1:51320599-51320618 None:intergenic 25.0%
! AACATTAAGATACGATACAA+GGG + chr1_1:51320764-51320783 None:intergenic 25.0%
! AAACATTAAGATACGATACA+AGG + chr1_1:51320765-51320784 None:intergenic 25.0%
! ATATGGCTATCATATAAATG+AGG + chr1_1:51320877-51320896 None:intergenic 25.0%
! TTTATATGATAGCCATATGA+TGG - chr1_1:51320879-51320898 Msa0027080:intron 25.0%
!! AATTGAAGAATTTTTCCACT+AGG + chr1_1:51321024-51321043 None:intergenic 25.0%
! TGGAAAAATTCTTCAATTGT+TGG - chr1_1:51321026-51321045 Msa0027080:intron 25.0%
! TAATTAGTCCTTTGTATAGT+TGG - chr1_1:51321240-51321259 Msa0027080:intron 25.0%
! TGAAAATAATCATAAAAGGG+GGG + chr1_1:51321376-51321395 None:intergenic 25.0%
! CTGAAAATAATCATAAAAGG+GGG + chr1_1:51321377-51321396 None:intergenic 25.0%
! GGACTGAAAATAATCATAAA+AGG + chr1_1:51321380-51321399 None:intergenic 25.0%
! CTGTTAGAAACAATAATTCA+AGG - chr1_1:51321434-51321453 Msa0027080:intron 25.0%
! TAGAAACAATAATTCAAGGT+AGG - chr1_1:51321438-51321457 Msa0027080:intron 25.0%
! AAAAGAAATTCAATTACCTC+TGG + chr1_1:51321719-51321738 None:intergenic 25.0%
! CTCTACATTTACATATTGAT+TGG + chr1_1:51321779-51321798 None:intergenic 25.0%
! GTTGTTCAGAAATACAAATT+AGG - chr1_1:51322099-51322118 Msa0027080:intron 25.0%
!! GGAAACATTGAATTTTCAAA+AGG - chr1_1:51322392-51322411 Msa0027080:intron 25.0%
!! CATTGAATTTTCAAAAGGAA+AGG - chr1_1:51322397-51322416 Msa0027080:intron 25.0%
!! ATTTTCAAAAGGAAAGGAAA+TGG - chr1_1:51322403-51322422 Msa0027080:intron 25.0%
! TTGTGTATACATGAAAAGTT+CGG + chr1_1:51322480-51322499 None:intergenic 25.0%
!! ATTTTACAAAAACGGAACTT+GGG + chr1_1:51322815-51322834 None:intergenic 25.0%
!! AATTTTACAAAAACGGAACT+TGG + chr1_1:51322816-51322835 None:intergenic 25.0%
!! AAAATTTTGTCATCTTTTGC+AGG - chr1_1:51322830-51322849 Msa0027080:intron 25.0%
! AACTATACAACAAAATGTGA+AGG + chr1_1:51322968-51322987 None:intergenic 25.0%
!! TGGAATGATTTTATAAAGAG+TGG + chr1_1:51323058-51323077 None:intergenic 25.0%
! CATTAAATAGAGATAAGACT+TGG + chr1_1:51323078-51323097 None:intergenic 25.0%
!! AGTCTTATCTCTATTTAATG+TGG - chr1_1:51323078-51323097 Msa0027080:intron 25.0%
! GTCTTATCTCTATTTAATGT+GGG - chr1_1:51323079-51323098 Msa0027080:intron 25.0%
! AGAAATCATTCCACATTATT+GGG + chr1_1:51323117-51323136 None:intergenic 25.0%
! AAGAAATCATTCCACATTAT+TGG + chr1_1:51323118-51323137 None:intergenic 25.0%
! ACGACGTATCTAATAAATAA+TGG - chr1_1:51323390-51323409 Msa0027080:CDS 25.0%
! ATATTCAAAACAGAGACATA+AGG - chr1_1:51323582-51323601 Msa0027080:intron 25.0%
! ATAAGGATTGTTGAAGTTAT+GGG - chr1_1:51323599-51323618 Msa0027080:intron 25.0%
!! CTTGATAGTAACTTAATACA+AGG - chr1_1:51323682-51323701 Msa0027080:intron 25.0%
! TCCCTAATCATAAATAAATC+GGG - chr1_1:51323714-51323733 Msa0027080:intron 25.0%
! TCCCGATTTATTTATGATTA+GGG + chr1_1:51323718-51323737 None:intergenic 25.0%
! TTCCCGATTTATTTATGATT+AGG + chr1_1:51323719-51323738 None:intergenic 25.0%
! CATAAATAAATCGGGAAATA+AGG - chr1_1:51323722-51323741 Msa0027080:intron 25.0%
! TTAGTGCATATAACAGAAAT+GGG + chr1_1:51324067-51324086 None:intergenic 25.0%
! TTTAGTGCATATAACAGAAA+TGG + chr1_1:51324068-51324087 None:intergenic 25.0%
! CTTAACATCAAATGTTTAGA+TGG - chr1_1:51324528-51324547 Msa0027080:intron 25.0%
!!! GCATGGTAAAATGTTTTAAA+GGG - chr1_1:51324590-51324609 Msa0027080:intron 25.0%
!! TTTTACTCAGTAGTTTCAAA+AGG - chr1_1:51324628-51324647 Msa0027080:intron 25.0%
! TTTACTCAGTAGTTTCAAAA+GGG - chr1_1:51324629-51324648 Msa0027080:intron 25.0%
! AGTAAAGAAAAAAAGTTCCA+AGG + chr1_1:51324723-51324742 None:intergenic 25.0%
! AAATTAGAGAGTTCTTTATG+AGG + chr1_1:51324897-51324916 None:intergenic 25.0%
!!! TTAGAGTTTTAATCCTCTTT+TGG - chr1_1:51325036-51325055 Msa0027080:intron 25.0%
!!! TTAGAGTTTTAATCCTCTTT+TGG - chr1_1:51325036-51325055 Msa0027080:intron 25.0%
! TATATATATGAGAGTTAAGG+AGG + chr1_1:51325337-51325356 None:intergenic 25.0%
! TATATATATGAGAGTTAAGG+AGG + chr1_1:51325337-51325356 None:intergenic 25.0%
! TATTTCTTAGAATTTGTGGT+TGG - chr1_1:51325442-51325461 Msa0027080:CDS 25.0%
! ATTTCTTAGAATTTGTGGTT+GGG - chr1_1:51325443-51325462 Msa0027080:CDS 25.0%
!! TTGAAGAATCAATTTTGTAC+TGG - chr1_1:51325576-51325595 Msa0027080:intron 25.0%
! TAACTAATTTAGTCACAGAA+TGG + chr1_1:51325899-51325918 None:intergenic 25.0%
!! TTTTTGTGTAACAAAAGACT+AGG - chr1_1:51326303-51326322 Msa0027080:CDS 25.0%
!! AACGTGCAAATACAATTTTT+AGG + chr1_1:51326371-51326390 None:intergenic 25.0%
!! TATCAGCCTTTAAAGAATAA+TGG + chr1_1:51326444-51326463 None:intergenic 25.0%
! TATTAATATCTCTGTACCTA+TGG - chr1_1:51326638-51326657 Msa0027080:intron 25.0%
! GAATGAATAAACTAAACCAT+AGG + chr1_1:51326657-51326676 None:intergenic 25.0%
!! AAAGTTTCATTTGTTGATCT+AGG + chr1_1:51326753-51326772 None:intergenic 25.0%
!! TTATCAAACTGATTTATTCC+TGG - chr1_1:51327042-51327061 Msa0027080:intron 25.0%
! TGATTTATTAGATGATTCCT+CGG + chr1_1:51327158-51327177 None:intergenic 25.0%
! AAATCATATTTCGGTGAAAA+AGG + chr1_1:51327231-51327250 None:intergenic 25.0%
!! TTTTTCACCGAAATATGATT+TGG - chr1_1:51327230-51327249 Msa0027080:intron 25.0%
! CAACTATCACATTAACTATA+TGG + chr1_1:51327464-51327483 None:intergenic 25.0%
!! AAATTCATCAAACGTTTTTC+TGG + chr1_1:51327593-51327612 None:intergenic 25.0%
! AAAAACGTTTGATGAATTTG+TGG - chr1_1:51327594-51327613 Msa0027080:intron 25.0%
! AAATCTCGACAATATAGTTT+AGG - chr1_1:51328150-51328169 Msa0027080:intron 25.0%
! TTTAATGCTTCTCTTTATTG+CGG - chr1_1:51328271-51328290 Msa0027080:CDS 25.0%
! TTATCCTACTAGTACTATTT+AGG - chr1_1:51328499-51328518 Msa0027080:CDS 25.0%
! TATCCTACTAGTACTATTTA+GGG - chr1_1:51328500-51328519 Msa0027080:CDS 25.0%
! ATATAAAGAATTGTACAGCT+CGG - chr1_1:51328667-51328686 Msa0027080:intron 25.0%
!!! ATTTTAAAATCCCTCTTTGT+AGG - chr1_1:51328788-51328807 Msa0027080:intron 25.0%
! GTTAAAATATCCTACAAAGA+GGG + chr1_1:51328801-51328820 None:intergenic 25.0%
! AGAACTAAAAAATCTCAAGA+TGG - chr1_1:51329036-51329055 Msa0027080:intron 25.0%
!! GGATTAAAAAATGTTTTCCT+GGG + chr1_1:51329077-51329096 None:intergenic 25.0%
!! TGGATTAAAAAATGTTTTCC+TGG + chr1_1:51329078-51329097 None:intergenic 25.0%
!! TATTAAAGTGAGTTCACTTT+TGG - chr1_1:51329174-51329193 Msa0027080:CDS 25.0%
!!! ATTAAAGTGAGTTCACTTTT+GGG - chr1_1:51329175-51329194 Msa0027080:CDS 25.0%
! GTTTCCATTAATAAGCAATA+AGG + chr1_1:51329255-51329274 None:intergenic 25.0%
! TATTAATGGAAACCATGTTA+AGG - chr1_1:51329262-51329281 Msa0027080:intron 25.0%
! CTAACAATGTATTGTATATG+TGG + chr1_1:51329340-51329359 None:intergenic 25.0%
!!! ATGGTGGATCAAAAATTAAT+GGG + chr1_1:51329528-51329547 None:intergenic 25.0%
!!! AATGGTGGATCAAAAATTAA+TGG + chr1_1:51329529-51329548 None:intergenic 25.0%
!!! ATTTTTGATCCACCATTTTT+AGG - chr1_1:51329532-51329551 Msa0027080:CDS 25.0%
! CTACGTTATGTATTTCTTAA+TGG + chr1_1:51329577-51329596 None:intergenic 25.0%
! TTCTTTGTTAAGATATCTCA+TGG - chr1_1:51329609-51329628 Msa0027080:CDS 25.0%
! ACAAAACATAAGGAAAAAGA+AGG + chr1_1:51329784-51329803 None:intergenic 25.0%
! GTGCAAATATTTCTTACATA+TGG + chr1_1:51329813-51329832 None:intergenic 25.0%
! TATGTAAGAAATATTTGCAC+CGG - chr1_1:51329813-51329832 Msa0027080:CDS 25.0%
!!! TTGCTTTTCAAGCTTATTTT+TGG + chr1_1:51330139-51330158 None:intergenic 25.0%
! ACTTATGTGGAAACTTTAAT+AGG - chr1_1:51330340-51330359 Msa0027080:intron 25.0%
! CTAATAAAATCAGTGAAGAA+AGG - chr1_1:51330842-51330861 Msa0027080:intron 25.0%
! CATCTTATAGTTTCAATGAA+TGG + chr1_1:51331018-51331037 None:intergenic 25.0%
! ACAATTTACCTCATATACAT+GGG + chr1_1:51331186-51331205 None:intergenic 25.0%
! ATAAAAATCAATAGCCCAAA+AGG + chr1_1:51331255-51331274 None:intergenic 25.0%
! ATTCCATTTAACAAAAAAGC+TGG + chr1_1:51331378-51331397 None:intergenic 25.0%
!! GTTTGAAATACGAGTTAAAA+AGG + chr1_1:51331563-51331582 None:intergenic 25.0%
! AAAAATATTGGATTCCATCA+TGG - chr1_1:51331620-51331639 Msa0027080:intron 25.0%
! TCATAAAAGCTCAAGTTATT+AGG + chr1_1:51331807-51331826 None:intergenic 25.0%
! TCTTAACCATTTAGTTATAC+AGG + chr1_1:51331857-51331876 None:intergenic 25.0%
!!! GTTTTAGAATCTACTAAGTT+AGG + chr1_1:51331928-51331947 None:intergenic 25.0%
! TATAATTGCTGTATTAGGTT+AGG - chr1_1:51331990-51332009 Msa0027080:intron 25.0%
! GTCAATTGTTTCCTATAAAT+AGG + chr1_1:51332259-51332278 None:intergenic 25.0%
! ATTCAATAATTGATGTAGAC+CGG - chr1_1:51332290-51332309 Msa0027080:intron 25.0%
!! CTTCAACAAAGTTTAAAATC+TGG - chr1_1:51332494-51332513 Msa0027080:intron 25.0%
! ACAATTGTATTCAAAATACC+TGG + chr1_1:51332848-51332867 None:intergenic 25.0%
! ATTGTTTAATTGAATCTGGA+TGG - chr1_1:51332863-51332882 Msa0027080:intron 25.0%
!!! AACAAGAAAGTATTTCCAAA+AGG + chr1_1:51332952-51332971 None:intergenic 25.0%
!! TGGAAATTTCTAAAAGATTC+TGG - chr1_1:51332974-51332993 Msa0027080:CDS 25.0%
!! TAGTCACATAGGTTTTTAAT+AGG - chr1_1:51333017-51333036 Msa0027080:CDS 25.0%
!!! AGGTTTTTAATAGGTTTGTT+TGG - chr1_1:51333026-51333045 Msa0027080:CDS 25.0%
!!! GGTTTTTAATAGGTTTGTTT+GGG - chr1_1:51333027-51333046 Msa0027080:CDS 25.0%
!!! TATTCGTCTTTTTTTCTTTC+TGG - chr1_1:51333077-51333096 Msa0027080:intron 25.0%
! TTTGTATTAACAATTAGTGG+CGG - chr1_1:51333239-51333258 Msa0027080:intron 25.0%
!! TTATCTTGTTTGTAGTTGTT+AGG - chr1_1:51333264-51333283 Msa0027080:intron 25.0%
!! TGTAATTGTCTTCTAAGTTT+TGG - chr1_1:51333354-51333373 Msa0027080:intron 25.0%
! ATTTCATATTGCTGATATAC+AGG - chr1_1:51333449-51333468 Msa0027080:CDS 25.0%
! TTAATGTTCAACTCTTCAAT+AGG - chr1_1:51333761-51333780 Msa0027080:intron 25.0%
!! TGTTTCTTTGTTTCATAACA+TGG - chr1_1:51334338-51334357 Msa0027080:intron 25.0%
! AACAACATCAGTAAGATAAA+TGG + chr1_1:51334366-51334385 None:intergenic 25.0%
! TCTTAATTAATTACAGCAAG+TGG + chr1_1:51334441-51334460 None:intergenic 25.0%
! TAGTGGTTATAACTTATAAG+TGG + chr1_1:51334776-51334795 None:intergenic 25.0%
! ATAAGTTATAACCACTATTC+AGG - chr1_1:51334779-51334798 Msa0027080:CDS 25.0%
! TTCTTATGAACTAATATCGT+CGG + chr1_1:51334914-51334933 None:intergenic 25.0%
! AAAAAAATCACTTATCACAG+AGG + chr1_1:51334980-51334999 None:intergenic 25.0%
!! ATCATTGATGATTTCATCAT+AGG + chr1_1:51335304-51335323 None:intergenic 25.0%
!! TTTTCTTTAAGTAGCGATTA+AGG - chr1_1:51335523-51335542 Msa0027080:CDS 25.0%
! AAGGAAAAAAAACTTACATC+TGG + chr1_1:51335863-51335882 None:intergenic 25.0%
!! AAAATATAGCGGAAAAAGAA+AGG + chr1_1:51335882-51335901 None:intergenic 25.0%
! AAAGATCAAAATGCATCAAT+TGG + chr1_1:51336054-51336073 None:intergenic 25.0%
!!! AATTTCTTTGTTGTTTGACA+CGG - chr1_1:51336134-51336153 Msa0027080:intron 25.0%
! TGAATTGATTATAGATTCTG+AGG + chr1_1:51336217-51336236 None:intergenic 25.0%
! TTTATCATAGTCATTAAGGA+AGG - chr1_1:51336502-51336521 Msa0027080:intron 25.0%
ATAACCTAAAAGATTGTCTC+AGG + chr1_1:51320018-51320037 None:intergenic 30.0%
! GGTTATGCATTCATTTTATC+AGG - chr1_1:51320079-51320098 Msa0027080:three_prime_UTR 30.0%
! TCATTTTATCAGGGAGAATA+TGG - chr1_1:51320089-51320108 Msa0027080:three_prime_UTR 30.0%
ATAAAAGTCCTTTGTACTTC+AGG - chr1_1:51320251-51320270 Msa0027080:three_prime_UTR 30.0%
ACCTTAAACATGAATGATTG+TGG - chr1_1:51320390-51320409 Msa0027080:three_prime_UTR 30.0%
CCTTAAACATGAATGATTGT+GGG - chr1_1:51320391-51320410 Msa0027080:three_prime_UTR 30.0%
AAGAGTAGAATAATGAAGAC+AGG - chr1_1:51320419-51320438 Msa0027080:three_prime_UTR 30.0%
AGAGTAGAATAATGAAGACA+GGG - chr1_1:51320420-51320439 Msa0027080:three_prime_UTR 30.0%
! TTTGAAGTCGATTCATAACT+AGG - chr1_1:51320496-51320515 Msa0027080:CDS 30.0%
ATCTTGATCTCAGATTATCT+AGG + chr1_1:51320684-51320703 None:intergenic 30.0%
! AATGAGGAAGCTTTATGAAA+GGG + chr1_1:51320861-51320880 None:intergenic 30.0%
! AAATGAGGAAGCTTTATGAA+AGG + chr1_1:51320862-51320881 None:intergenic 30.0%
CTGATTAATTTAATCTGCAG+AGG + chr1_1:51320981-51321000 None:intergenic 30.0%
CCAAAATACCAACTATACAA+AGG + chr1_1:51321251-51321270 None:intergenic 30.0%
!! CCTTTGTATAGTTGGTATTT+TGG - chr1_1:51321248-51321267 Msa0027080:intron 30.0%
GAAAATAATCATAAAAGGGG+GGG + chr1_1:51321375-51321394 None:intergenic 30.0%
AAACAATAATTCAAGGTAGG+AGG - chr1_1:51321441-51321460 Msa0027080:intron 30.0%
TTTGCACTGCATCAATATAA+GGG + chr1_1:51321485-51321504 None:intergenic 30.0%
ATTTGCACTGCATCAATATA+AGG + chr1_1:51321486-51321505 None:intergenic 30.0%
AAACAGTGATAATTCCTTTC+AGG + chr1_1:51321674-51321693 None:intergenic 30.0%
TTTGCGCTGAATCAAAATTA+AGG - chr1_1:51321736-51321755 Msa0027080:intron 30.0%
AATTAAGGTGACAGAAAGAT+CGG - chr1_1:51321751-51321770 Msa0027080:intron 30.0%
! TTTTCTACCAAACCACTATA+CGG + chr1_1:51321890-51321909 None:intergenic 30.0%
TCAAACAAATTGCTATGAGT+TGG - chr1_1:51322149-51322168 Msa0027080:intron 30.0%
TTGAAATATAGCTTCCTGAA+TGG + chr1_1:51322348-51322367 None:intergenic 30.0%
TGAAACTATTGTTAAATGCC+TGG - chr1_1:51322647-51322666 Msa0027080:intron 30.0%
!!! TGGTTTTTTAAGGATGAGAT+AGG + chr1_1:51323016-51323035 None:intergenic 30.0%
! TTGAGTTTTTCCCAATAATG+TGG - chr1_1:51323104-51323123 Msa0027080:intron 30.0%
! GTTTTATAAGGGGATAAAAG+CGG + chr1_1:51323298-51323317 None:intergenic 30.0%
AAACCTGATTAAAATGTTGC+TGG + chr1_1:51323506-51323525 None:intergenic 30.0%
CATAAGGATTGTTGAAGTTA+TGG - chr1_1:51323598-51323617 Msa0027080:intron 30.0%
ATAATGAGACGAGAGAAATA+AGG - chr1_1:51323628-51323647 Msa0027080:intron 30.0%
GGATGTAAGAAACTAATCTT+AGG - chr1_1:51323743-51323762 Msa0027080:intron 30.0%
TGTTGACAATCAAGATATTC+TGG - chr1_1:51323957-51323976 Msa0027080:intron 30.0%
TATTCTGGATCTCATTGAAA+AGG - chr1_1:51323972-51323991 Msa0027080:intron 30.0%
! ACCATAACCATTTTGTTGAT+TGG - chr1_1:51324009-51324028 Msa0027080:intron 30.0%
TCTGTTATATGCACTAAATG+TGG - chr1_1:51324070-51324089 Msa0027080:intron 30.0%
TTATATGCACTAAATGTGGA+GGG - chr1_1:51324074-51324093 Msa0027080:intron 30.0%
TCTCAATTAGAGAAAGTAGA+AGG - chr1_1:51324121-51324140 Msa0027080:CDS 30.0%
CTCAATTAGAGAAAGTAGAA+GGG - chr1_1:51324122-51324141 Msa0027080:CDS 30.0%
! CACAATGACATTAACTTTTG+AGG - chr1_1:51324340-51324359 Msa0027080:intron 30.0%
! TACTATATAGTTCCCTTTTC+AGG - chr1_1:51324388-51324407 Msa0027080:CDS 30.0%
! TTTTACCATGCCTTTAATCA+TGG + chr1_1:51324581-51324600 None:intergenic 30.0%
!! GGCATGGTAAAATGTTTTAA+AGG - chr1_1:51324589-51324608 Msa0027080:intron 30.0%
!! ATGTGATCTTTGGAGTAAAA+AGG - chr1_1:51324668-51324687 Msa0027080:intron 30.0%
GAAAATGATTTGACCAAAAG+AGG + chr1_1:51325052-51325071 None:intergenic 30.0%
GAAAATGATTTGACCAAAAG+AGG + chr1_1:51325052-51325071 None:intergenic 30.0%
TTAAGGAGGTTCATAAAAAG+AGG + chr1_1:51325323-51325342 None:intergenic 30.0%
TTAAGGAGGTTCATAAAAAG+AGG + chr1_1:51325323-51325342 None:intergenic 30.0%
TGAACAAGTGTTTATAAGTG+GGG + chr1_1:51325512-51325531 None:intergenic 30.0%
CTGAACAAGTGTTTATAAGT+GGG + chr1_1:51325513-51325532 None:intergenic 30.0%
! ATATTGTTTAAGACCCACAT+CGG + chr1_1:51325548-51325567 None:intergenic 30.0%
! TTCAATTATAATTTTCCCCG+TGG - chr1_1:51325702-51325721 Msa0027080:intron 30.0%
TAAGTATGGATACATCCTAA+AGG + chr1_1:51326150-51326169 None:intergenic 30.0%
GTGACACATAAATAAAGGAA+AGG + chr1_1:51326200-51326219 None:intergenic 30.0%
CTTGTGTGACACATAAATAA+AGG + chr1_1:51326205-51326224 None:intergenic 30.0%
!!! AAAAGACTAGGTTTTGAACA+AGG - chr1_1:51326315-51326334 Msa0027080:CDS 30.0%
TTTGAACAAGGTCAATAAGA+AGG - chr1_1:51326327-51326346 Msa0027080:CDS 30.0%
ATTTGCACGTTGAATATAGT+TGG - chr1_1:51326380-51326399 Msa0027080:CDS 30.0%
ATATTCATCTTTCAGAAACC+TGG - chr1_1:51326537-51326556 Msa0027080:intron 30.0%
AATACCAATACCAGTTCAAA+GGG + chr1_1:51326613-51326632 None:intergenic 30.0%
TAATACCAATACCAGTTCAA+AGG + chr1_1:51326614-51326633 None:intergenic 30.0%
!! TTGAACTGGTATTGGTATTA+TGG - chr1_1:51326614-51326633 Msa0027080:intron 30.0%
GCAGAAATAGTCAAAACTTA+TGG + chr1_1:51326687-51326706 None:intergenic 30.0%
! GCGTAATATGTGGAAATTTT+AGG - chr1_1:51327015-51327034 Msa0027080:intron 30.0%
ACAAATAAACCCGATACAAA+GGG + chr1_1:51327127-51327146 None:intergenic 30.0%
GATTTATTAGATGATTCCTC+GGG + chr1_1:51327157-51327176 None:intergenic 30.0%
AAAAATCACCAACCTTAAAC+CGG + chr1_1:51327201-51327220 None:intergenic 30.0%
! TTTTTGTGCTCAAAAATTGC+TGG + chr1_1:51327387-51327406 None:intergenic 30.0%
! ATGAATTTGTGGATCGATTT+GGG - chr1_1:51327605-51327624 Msa0027080:intron 30.0%
AATCGCTCAAAGAATAAAGT+AGG + chr1_1:51327828-51327847 None:intergenic 30.0%
ACTTTCCTATCAATTAGCTA+AGG - chr1_1:51327914-51327933 Msa0027080:CDS 30.0%
AACTATATTGTCGAGATTTG+TGG + chr1_1:51328149-51328168 None:intergenic 30.0%
! CGACAATATAGTTTAGGTTT+AGG - chr1_1:51328156-51328175 Msa0027080:intron 30.0%
!!! AATTTCTATTTTTGGCCATC+AGG - chr1_1:51328219-51328238 Msa0027080:CDS 30.0%
ACTTGTAGAAGTGAGATATT+AGG - chr1_1:51328348-51328367 Msa0027080:CDS 30.0%
ATCCTACTAGTACTATTTAG+GGG - chr1_1:51328501-51328520 Msa0027080:CDS 30.0%
! TTCTTTTATATGCTGTTCAC+AGG - chr1_1:51328551-51328570 Msa0027080:CDS 30.0%
CGTTAAAATATCCTACAAAG+AGG + chr1_1:51328802-51328821 None:intergenic 30.0%
AACAATGGTTGTGTAATGTA+TGG + chr1_1:51328851-51328870 None:intergenic 30.0%
AAATCCAAGATTAGCAACAA+TGG + chr1_1:51328866-51328885 None:intergenic 30.0%
AGTTTACAACATCTCATTGA+TGG + chr1_1:51329098-51329117 None:intergenic 30.0%
CATTAATAAGCAATAAGGTG+CGG + chr1_1:51329250-51329269 None:intergenic 30.0%
GACATTTATCCTAAAAATGG+TGG + chr1_1:51329544-51329563 None:intergenic 30.0%
GGTGACATTTATCCTAAAAA+TGG + chr1_1:51329547-51329566 None:intergenic 30.0%
CGTTATGTATTTCTTAATGG+AGG + chr1_1:51329574-51329593 None:intergenic 30.0%
AAACCTTGAAACTCAATCAA+AGG - chr1_1:51329707-51329726 Msa0027080:intron 30.0%
ATGGAGATAGACAAAACATA+AGG + chr1_1:51329794-51329813 None:intergenic 30.0%
! TGCTCATGAAAAAGTACATT+AGG - chr1_1:51329891-51329910 Msa0027080:intron 30.0%
TATGTGGAAACTTTAATAGG+TGG - chr1_1:51330343-51330362 Msa0027080:intron 30.0%
AGATTTAAGAAGCTTTGCAA+GGG + chr1_1:51330429-51330448 None:intergenic 30.0%
! TAAACAAATGTAGGTTGACA+TGG - chr1_1:51330452-51330471 Msa0027080:intron 30.0%
AACTAAGTCATTGCTTCAAA+AGG - chr1_1:51330545-51330564 Msa0027080:intron 30.0%
TAGTGAAAATGAGAAACTCA+AGG - chr1_1:51330656-51330675 Msa0027080:intron 30.0%
AAATTGACGAAACAGAGAAA+AGG - chr1_1:51330809-51330828 Msa0027080:intron 30.0%
! TTTGCATAGAAGTTTTCAAC+TGG + chr1_1:51330903-51330922 None:intergenic 30.0%
AGTTGAAAACTTCTATGCAA+AGG - chr1_1:51330902-51330921 Msa0027080:intron 30.0%
CACAATTTACCTCATATACA+TGG + chr1_1:51331187-51331206 None:intergenic 30.0%
! TATGCAAATGTGAACCTTTT+GGG - chr1_1:51331238-51331257 Msa0027080:intron 30.0%
! TGATTTTTATCTGCAGAAGT+TGG - chr1_1:51331265-51331284 Msa0027080:intron 30.0%
CTAAAATGAGTTAACTTTGC+AGG - chr1_1:51331398-51331417 Msa0027080:intron 30.0%
!!! TCTGTACCAAACTTTTTCAA+AGG + chr1_1:51331441-51331460 None:intergenic 30.0%
CAGAATCTGATAGCAAATTA+AGG - chr1_1:51331457-51331476 Msa0027080:intron 30.0%
TTAACTCGTATTTCAAACGT+AGG - chr1_1:51331565-51331584 Msa0027080:intron 30.0%
TCAGAACCTGTATAACTAAA+TGG - chr1_1:51331848-51331867 Msa0027080:intron 30.0%
AACAATGATATGTAGTCTAG+TGG - chr1_1:51331945-51331964 Msa0027080:intron 30.0%
CAGTCTATAATTGCTGTATT+AGG - chr1_1:51331985-51332004 Msa0027080:intron 30.0%
!!! CAAGTGTAAATGTTGCTTTT+TGG - chr1_1:51332100-51332119 Msa0027080:intron 30.0%
!! TTTTAAGAAAAACTGCTGGA+GGG + chr1_1:51332166-51332185 None:intergenic 30.0%
!! ACTCTTTTAAGAAAAACTGC+TGG + chr1_1:51332170-51332189 None:intergenic 30.0%
TTATTAAATGATACTCCCTC+CGG - chr1_1:51332232-51332251 Msa0027080:intron 30.0%
TTGTTTCCTATAAATAGGAC+CGG + chr1_1:51332254-51332273 None:intergenic 30.0%
AATTAGAATAATACTCCCTC+CGG + chr1_1:51332312-51332331 None:intergenic 30.0%
CGTGGAAGAAAAAGTTATAT+TGG + chr1_1:51332399-51332418 None:intergenic 30.0%
TCAAGATGACAATGATCTTA+TGG - chr1_1:51332433-51332452 Msa0027080:intron 30.0%
! CAACAAAGTTTAAAATCTGG+TGG - chr1_1:51332497-51332516 Msa0027080:intron 30.0%
GCTTATGTGGAGAAAATATA+TGG - chr1_1:51332768-51332787 Msa0027080:intron 30.0%
AGAAAATATATGGCATCTTG+CGG - chr1_1:51332778-51332797 Msa0027080:intron 30.0%
! CATATATACTATCTGCCTTT+TGG - chr1_1:51332934-51332953 Msa0027080:intron 30.0%
! TGGAAATACTTTCTTGTTTC+TGG - chr1_1:51332954-51332973 Msa0027080:CDS 30.0%
! ATAGGTTTGTTTGGGATATT+TGG - chr1_1:51333035-51333054 Msa0027080:intron 30.0%
ACAAGAAATGAATGTAAACC+AGG + chr1_1:51333337-51333356 None:intergenic 30.0%
!! TTGGCACTTGTTCTAAAATT+TGG - chr1_1:51333373-51333392 Msa0027080:intron 30.0%
! TTTTAGTAAAGATTCTCCCA+TGG - chr1_1:51333512-51333531 Msa0027080:intron 30.0%
TTTAGTAAAGATTCTCCCAT+GGG - chr1_1:51333513-51333532 Msa0027080:intron 30.0%
GATATATTGTTATGGGTTTC+AGG - chr1_1:51333690-51333709 Msa0027080:intron 30.0%
! ATTCTTTGACGTAGTTGTTT+TGG - chr1_1:51333802-51333821 Msa0027080:intron 30.0%
!! ACTTTAAGATAAAAGCACCA+TGG + chr1_1:51333831-51333850 None:intergenic 30.0%
GAGTTATTGCACATATTACT+TGG - chr1_1:51334150-51334169 Msa0027080:intron 30.0%
AAAGTCTAACCAAATTGTCT+TGG - chr1_1:51334245-51334264 Msa0027080:CDS 30.0%
AAGTCTAACCAAATTGTCTT+GGG - chr1_1:51334246-51334265 Msa0027080:CDS 30.0%
TTTATCCTATGATAAACCCA+AGG + chr1_1:51334477-51334496 None:intergenic 30.0%
CTGATTTATGGAATTGAGTT+AGG + chr1_1:51334730-51334749 None:intergenic 30.0%
! AAACCATTAGCTTCAACATT+GGG + chr1_1:51335008-51335027 None:intergenic 30.0%
! AAAACCATTAGCTTCAACAT+TGG + chr1_1:51335009-51335028 None:intergenic 30.0%
ACTAATCTTTACAGTAGTTC+AGG - chr1_1:51335050-51335069 Msa0027080:intron 30.0%
! AGGTTATTCATCAGAAGTAT+AGG - chr1_1:51335274-51335293 Msa0027080:CDS 30.0%
TTCAGATGGATAGATACTTA+CGG + chr1_1:51335334-51335353 None:intergenic 30.0%
!! AATTTGTTGGAATAAGGAAG+AGG + chr1_1:51335754-51335773 None:intergenic 30.0%
!! GCAGAAAATTTGTTGGAATA+AGG + chr1_1:51335760-51335779 None:intergenic 30.0%
ATCTGATGCAGAAAATTTGT+TGG + chr1_1:51335767-51335786 None:intergenic 30.0%
GATATTGGAGCAAAATATAG+CGG + chr1_1:51335893-51335912 None:intergenic 30.0%
!! ATTTCTTTGTTGTTTGACAC+GGG - chr1_1:51336135-51336154 Msa0027080:intron 30.0%
CTACTCATTCAAAAATTGGA+AGG + chr1_1:51336455-51336474 None:intergenic 30.0%
! CTTCCAATTTTTGAATGAGT+AGG - chr1_1:51336453-51336472 Msa0027080:intron 30.0%
!! TTCATTTTAAAGAGGGGATA+GGG - chr1_1:51336722-51336741 Msa0027080:CDS 30.0%
TTAAACCAGAATCACGAAAA+TGG + chr1_1:51336783-51336802 None:intergenic 30.0%
TTACACAGCAAAACAAAATG+TGG + chr1_1:51336877-51336896 None:intergenic 30.0%
! ACAACCTGAGACAATCTTTT+AGG - chr1_1:51320011-51320030 Msa0027080:three_prime_UTR 35.0%
CCTTTGTACTTCAGGAAAAA+CGG - chr1_1:51320259-51320278 Msa0027080:three_prime_UTR 35.0%
!! TTCTTTGAAACTACCACTTC+AGG - chr1_1:51320345-51320364 Msa0027080:three_prime_UTR 35.0%
! AAACTACCACTTCAGGTTAA+TGG - chr1_1:51320352-51320371 Msa0027080:three_prime_UTR 35.0%
CCCACAATCATTCATGTTTA+AGG + chr1_1:51320394-51320413 None:intergenic 35.0%
GTAGTATCCTGCAGTTTATT+TGG - chr1_1:51320456-51320475 Msa0027080:exon 35.0%
TAGTACTCCAAATAAACTGC+AGG + chr1_1:51320466-51320485 None:intergenic 35.0%
CAAGGGAGACAAAATTTGAA+CGG + chr1_1:51320747-51320766 None:intergenic 35.0%
! ATTTTGCTTCCAGACTTACA+CGG - chr1_1:51320813-51320832 Msa0027080:intron 35.0%
CTTTATATTGCGCCATCATA+TGG + chr1_1:51320894-51320913 None:intergenic 35.0%
! CATATGATGGCGCAATATAA+AGG - chr1_1:51320892-51320911 Msa0027080:intron 35.0%
! TGAAGAATTTTTCCACTAGG+TGG + chr1_1:51321021-51321040 None:intergenic 35.0%
ATGTAGGCTTATGATCAATG+AGG - chr1_1:51321068-51321087 Msa0027080:intron 35.0%
TGTAGGCTTATGATCAATGA+GGG - chr1_1:51321069-51321088 Msa0027080:intron 35.0%
! ATATTGGTTAGTGGTGAAAG+TGG - chr1_1:51321105-51321124 Msa0027080:CDS 35.0%
! TATTGGTTAGTGGTGAAAGT+GGG - chr1_1:51321106-51321125 Msa0027080:CDS 35.0%
ACTAATCTAGATGCAGGAAA+AGG + chr1_1:51321313-51321332 None:intergenic 35.0%
! TTTTCCTGCATCTAGATTAG+TGG - chr1_1:51321312-51321331 Msa0027080:intron 35.0%
AATTCAGAGGATATGACGTA+AGG + chr1_1:51321341-51321360 None:intergenic 35.0%
TTACGTCATATCCTCTGAAT+TGG - chr1_1:51321340-51321359 Msa0027080:intron 35.0%
AACAGTCTTTGCATTTCCAA+AGG + chr1_1:51321419-51321438 None:intergenic 35.0%
GAGATTCAATTTGACCAGAA+GGG - chr1_1:51321581-51321600 Msa0027080:intron 35.0%
AGAAATTCAATTACCTCTGG+AGG + chr1_1:51321716-51321735 None:intergenic 35.0%
TTTCTACCAAACCACTATAC+GGG + chr1_1:51321889-51321908 None:intergenic 35.0%
! TGTTGTAAGATGTGTCCTTT+TGG - chr1_1:51321969-51321988 Msa0027080:intron 35.0%
! ACAAATTGCTATGAGTTGGA+TGG - chr1_1:51322153-51322172 Msa0027080:intron 35.0%
!!! TGGAATAAGTTTTGAAGAGC+AGG - chr1_1:51322227-51322246 Msa0027080:intron 35.0%
TTGAAGAGCAGGTATTTCAT+AGG - chr1_1:51322238-51322257 Msa0027080:intron 35.0%
TGAAGAGCAGGTATTTCATA+GGG - chr1_1:51322239-51322258 Msa0027080:intron 35.0%
TCAGGAAGCTATATTTCAAG+TGG - chr1_1:51322349-51322368 Msa0027080:intron 35.0%
! GTTGCTGCAATTTTACATCT+TGG - chr1_1:51322371-51322390 Msa0027080:intron 35.0%
! AACCGAGATTTTTCATCCTT+GGG + chr1_1:51322440-51322459 None:intergenic 35.0%
! AAACCGAGATTTTTCATCCT+TGG + chr1_1:51322441-51322460 None:intergenic 35.0%
TGTATACATGAAAAGTTCGG+CGG + chr1_1:51322477-51322496 None:intergenic 35.0%
AAACAAGATTTCACATGGAG+AGG + chr1_1:51322554-51322573 None:intergenic 35.0%
GAGCAGAATGCACAAAAATA+TGG - chr1_1:51322747-51322766 Msa0027080:intron 35.0%
TTGAGAGTTTCAAGACTAAC+AGG - chr1_1:51322932-51322951 Msa0027080:intron 35.0%
!!! CCTTACAAGCTGGTTTTTTA+AGG + chr1_1:51323026-51323045 None:intergenic 35.0%
CCTTAAAAAACCAGCTTGTA+AGG - chr1_1:51323023-51323042 Msa0027080:CDS 35.0%
TTCTCAATAGAAGCCTTTCT+TGG + chr1_1:51323152-51323171 None:intergenic 35.0%
GTAGTCATGATGGTAATCAT+TGG + chr1_1:51323203-51323222 None:intergenic 35.0%
AAAAGCGGAGTAATTCAAGT+TGG + chr1_1:51323283-51323302 None:intergenic 35.0%
! TAATCAGGTTTGTTTGTGAG+AGG - chr1_1:51323515-51323534 Msa0027080:intron 35.0%
! AATCAGGTTTGTTTGTGAGA+GGG - chr1_1:51323516-51323535 Msa0027080:intron 35.0%
! TCTGCAGCATGTTTTCAAAA+TGG - chr1_1:51323885-51323904 Msa0027080:intron 35.0%
GCAAGAAGAATACAAGAAAG+AGG - chr1_1:51323909-51323928 Msa0027080:intron 35.0%
ACAAGAAAGAGGAGATTGAT+TGG - chr1_1:51323920-51323939 Msa0027080:intron 35.0%
AAAATGGTTATGGTGATAGC+AGG + chr1_1:51324003-51324022 None:intergenic 35.0%
GCCAATCAACAAAATGGTTA+TGG + chr1_1:51324013-51324032 None:intergenic 35.0%
GTTATATGCACTAAATGTGG+AGG - chr1_1:51324073-51324092 Msa0027080:intron 35.0%
! CATACTAGCTTGTGATAGAA+GGG - chr1_1:51324154-51324173 Msa0027080:CDS 35.0%
! TTCCAGAATATTTTCCTGGA+TGG - chr1_1:51324186-51324205 Msa0027080:CDS 35.0%
TTTACCAGAAAACCAAGTCT+AGG - chr1_1:51324236-51324255 Msa0027080:CDS 35.0%
!! ACTAACAAGGAAAAGTGTCA+CGG + chr1_1:51324436-51324455 None:intergenic 35.0%
! TGAAAGCAACTGCAGTTTTA+CGG + chr1_1:51324498-51324517 None:intergenic 35.0%
!! TGGTTGATGACCATGATTAA+AGG - chr1_1:51324568-51324587 Msa0027080:intron 35.0%
! TTTTAAACATCTTTGGGCCT+TGG - chr1_1:51324703-51324722 Msa0027080:intron 35.0%
GAACAAGTGTTTATAAGTGG+GGG + chr1_1:51325511-51325530 None:intergenic 35.0%
CCTGAACAAGTGTTTATAAG+TGG + chr1_1:51325514-51325533 None:intergenic 35.0%
CCACTTATAAACACTTGTTC+AGG - chr1_1:51325511-51325530 Msa0027080:intron 35.0%
! AGCAATATACTTTTCTGCTG+AGG + chr1_1:51326033-51326052 None:intergenic 35.0%
GTGCAAGTGAAGTTTAAGTA+TGG + chr1_1:51326164-51326183 None:intergenic 35.0%
CAAGGTCAATAAGAAGGTAA+TGG - chr1_1:51326333-51326352 Msa0027080:CDS 35.0%
AGACGTTCAAGAACCATAAA+AGG - chr1_1:51326790-51326809 Msa0027080:CDS 35.0%
GAAAACTCATGCGTAATATG+TGG - chr1_1:51327005-51327024 Msa0027080:intron 35.0%
CATAATCTTTGTTCTTGTCC+AGG + chr1_1:51327063-51327082 None:intergenic 35.0%
!! ATACAGAAGTGCTTGATGTT+CGG + chr1_1:51327092-51327111 None:intergenic 35.0%
CAAATAAACCCGATACAAAG+GGG + chr1_1:51327126-51327145 None:intergenic 35.0%
GACAAATAAACCCGATACAA+AGG + chr1_1:51327128-51327147 None:intergenic 35.0%
! AGTTTTCTTCAATAGGTTCC+CGG - chr1_1:51327179-51327198 Msa0027080:intron 35.0%
AAAATCACCAACCTTAAACC+GGG + chr1_1:51327200-51327219 None:intergenic 35.0%
! AGGGATATCAAAAGTGCATA+AGG + chr1_1:51327263-51327282 None:intergenic 35.0%
TTAACACAACGAATGTAGTG+TGG + chr1_1:51327345-51327364 None:intergenic 35.0%
TAACTATATGGTCCAAAACC+AGG + chr1_1:51327452-51327471 None:intergenic 35.0%
TACATAGTGTGTCTTCTTGT+AGG - chr1_1:51327525-51327544 Msa0027080:intron 35.0%
ACATAGTGTGTCTTCTTGTA+GGG - chr1_1:51327526-51327545 Msa0027080:intron 35.0%
!! TCATCAAACGTTTTTCTGGT+GGG + chr1_1:51327589-51327608 None:intergenic 35.0%
! TTCATCAAACGTTTTTCTGG+TGG + chr1_1:51327590-51327609 None:intergenic 35.0%
GATGAATTTGTGGATCGATT+TGG - chr1_1:51327604-51327623 Msa0027080:intron 35.0%
ATCAGGTAACAATTACCATG+TGG - chr1_1:51327798-51327817 Msa0027080:intron 35.0%
GTGAACCTTAGCTAATTGAT+AGG + chr1_1:51327922-51327941 None:intergenic 35.0%
TCAATTAGCTAAGGTTCACT+TGG - chr1_1:51327923-51327942 Msa0027080:CDS 35.0%
ATATATCTGCAGTTACCTGA+TGG + chr1_1:51328237-51328256 None:intergenic 35.0%
TTCCCCTAAATAGTACTAGT+AGG + chr1_1:51328506-51328525 None:intergenic 35.0%
!! TCGGCTATTTCTATTCAAAC+TGG - chr1_1:51328686-51328705 Msa0027080:intron 35.0%
ACAACCATTGTTGCTAATCT+TGG - chr1_1:51328859-51328878 Msa0027080:intron 35.0%
TCTGCAATACACAATCACAA+AGG + chr1_1:51328919-51328938 None:intergenic 35.0%
CGCACCTTATTGCTTATTAA+TGG - chr1_1:51329248-51329267 Msa0027080:intron 35.0%
GGAAATGAAGAACCTTAACA+TGG + chr1_1:51329277-51329296 None:intergenic 35.0%
TGCAATGGTACAATGAGTAT+GGG + chr1_1:51329308-51329327 None:intergenic 35.0%
ATGCAATGGTACAATGAGTA+TGG + chr1_1:51329309-51329328 None:intergenic 35.0%
! GTATTTCTTAATGGAGGCAT+GGG + chr1_1:51329568-51329587 None:intergenic 35.0%
TGTATTTCTTAATGGAGGCA+TGG + chr1_1:51329569-51329588 None:intergenic 35.0%
TCTAGTAAGGGTGAAATCTA+TGG + chr1_1:51329761-51329780 None:intergenic 35.0%
GGAAAAAGAAGGTCTAGTAA+GGG + chr1_1:51329773-51329792 None:intergenic 35.0%
AGGAAAAAGAAGGTCTAGTA+AGG + chr1_1:51329774-51329793 None:intergenic 35.0%
TTCCAACAGACAAAATAGCA+TGG + chr1_1:51329994-51330013 None:intergenic 35.0%
!! GCTATTTTGTCTGTTGGAAA+TGG - chr1_1:51329995-51330014 Msa0027080:intron 35.0%
AAGTTGAAGACCTTACATTG+AGG - chr1_1:51330157-51330176 Msa0027080:CDS 35.0%
!! AGCTCTAGACAATACTTATG+TGG - chr1_1:51330327-51330346 Msa0027080:intron 35.0%
GAGATTTAAGAAGCTTTGCA+AGG + chr1_1:51330430-51330449 None:intergenic 35.0%
ATCAAACCATGATCAACAAC+AGG + chr1_1:51330624-51330643 None:intergenic 35.0%
TGTTGTTGATCATGGTTTGA+TGG - chr1_1:51330623-51330642 Msa0027080:intron 35.0%
AATACTATGTTTCAGCACAG+AGG + chr1_1:51330708-51330727 None:intergenic 35.0%
TCTGTGCTGAAACATAGTAT+TGG - chr1_1:51330707-51330726 Msa0027080:intron 35.0%
! AACAGAGAAAAGGTATGAAG+AGG - chr1_1:51330819-51330838 Msa0027080:intron 35.0%
GATACTGCTTCAAAGACTTA+AGG + chr1_1:51330996-51331015 None:intergenic 35.0%
! GTATGCAAATGTGAACCTTT+TGG - chr1_1:51331237-51331256 Msa0027080:intron 35.0%
TATCTGCAGAAGTTGGAAAA+TGG - chr1_1:51331272-51331291 Msa0027080:intron 35.0%
CTTTCTGATCTTCTACCATA+TGG + chr1_1:51331301-51331320 None:intergenic 35.0%
!!! ACGCCAGCTTTTTTGTTAAA+TGG - chr1_1:51331372-51331391 Msa0027080:intron 35.0%
! GTCACACCTTTGAAAAAGTT+TGG - chr1_1:51331432-51331451 Msa0027080:intron 35.0%
ACATTTGTAAATGGTGAACG+CGG + chr1_1:51331657-51331676 None:intergenic 35.0%
GTGGAGAAGACATTTGTAAA+TGG + chr1_1:51331666-51331685 None:intergenic 35.0%
TTTACAAATGTCTTCTCCAC+TGG - chr1_1:51331666-51331685 Msa0027080:intron 35.0%
AAGCTCAAGTTATTAGGTGA+AGG + chr1_1:51331801-51331820 None:intergenic 35.0%
! CAGGTTCTGATACTATTTCA+AGG + chr1_1:51331838-51331857 None:intergenic 35.0%
!! CTTTTAAGAAAAACTGCTGG+AGG + chr1_1:51332167-51332186 None:intergenic 35.0%
AATAATTGATGTAGACCGGA+GGG - chr1_1:51332294-51332313 Msa0027080:intron 35.0%
GATCATTGTCATCTTGATTC+TGG + chr1_1:51332430-51332449 None:intergenic 35.0%
ACAATGATCTTATGGCCTAT+TGG - chr1_1:51332441-51332460 Msa0027080:intron 35.0%
!! ATTTGGTGGTTTTCTAACTG+GGG + chr1_1:51332537-51332556 None:intergenic 35.0%
!!! GATTTGGTGGTTTTCTAACT+GGG + chr1_1:51332538-51332557 None:intergenic 35.0%
CATAGTCATTCTTCCAAAGA+GGG + chr1_1:51332567-51332586 None:intergenic 35.0%
GAAAATATATGGCATCTTGC+GGG - chr1_1:51332779-51332798 Msa0027080:intron 35.0%
!!! CGTCTTTTTTTCTTTCTGGA+CGG - chr1_1:51333081-51333100 Msa0027080:intron 35.0%
CTTTGCACTTAACAAATTCC+AGG + chr1_1:51333139-51333158 None:intergenic 35.0%
!! GGAATTTGTTAAGTGCAAAG+TGG - chr1_1:51333139-51333158 Msa0027080:intron 35.0%
AAAGAAACGAAACCGGATAT+CGG + chr1_1:51333173-51333192 None:intergenic 35.0%
TATCCGGTTTCGTTTCTTTA+TGG - chr1_1:51333174-51333193 Msa0027080:intron 35.0%
GAACCATAAAGAAACGAAAC+CGG + chr1_1:51333180-51333199 None:intergenic 35.0%
! AAGATCTTTTGGATAAGGAC+AGG + chr1_1:51333721-51333740 None:intergenic 35.0%
! GAGAGAAGATCTTTTGGATA+AGG + chr1_1:51333726-51333745 None:intergenic 35.0%
! ACGTTTGAGAGAAGATCTTT+TGG + chr1_1:51333732-51333751 None:intergenic 35.0%
! TTAATTACAGCAAGTGGACT+GGG + chr1_1:51334435-51334454 None:intergenic 35.0%
ATTAATTACAGCAAGTGGAC+TGG + chr1_1:51334436-51334455 None:intergenic 35.0%
ATCCATGTTGCTAGTAAGTT+GGG + chr1_1:51334647-51334666 None:intergenic 35.0%
TATCCATGTTGCTAGTAAGT+TGG + chr1_1:51334648-51334667 None:intergenic 35.0%
TAGTGATATAGCCTGAATAG+TGG + chr1_1:51334793-51334812 None:intergenic 35.0%
AAATCACTTATCACAGAGGA+CGG + chr1_1:51334976-51334995 None:intergenic 35.0%
TCAGATGGATAGATACTTAC+GGG + chr1_1:51335333-51335352 None:intergenic 35.0%
TGAAGCTTTCTGTGATAGTA+TGG - chr1_1:51335350-51335369 Msa0027080:CDS 35.0%
GAAGCTTTCTGTGATAGTAT+GGG - chr1_1:51335351-51335370 Msa0027080:CDS 35.0%
AAGCTTTCTGTGATAGTATG+GGG - chr1_1:51335352-51335371 Msa0027080:CDS 35.0%
TTAAACTTGGAGATTGCATG+AGG - chr1_1:51335570-51335589 Msa0027080:intron 35.0%
ATTTAGTCCTAACGATGGAT+TGG - chr1_1:51335628-51335647 Msa0027080:intron 35.0%
! TATTTTGCTCCAATATCAGC+AGG - chr1_1:51335896-51335915 Msa0027080:intron 35.0%
TGTTAATAGCCTGCTGATAT+TGG + chr1_1:51335908-51335927 None:intergenic 35.0%
TTAACACGCTGAAATCATTC+AGG - chr1_1:51335922-51335941 Msa0027080:intron 35.0%
TAAGTACCTTCATGCTTGAA+AGG + chr1_1:51335949-51335968 None:intergenic 35.0%
!! TTCAAGCATGAAGGTACTTA+TGG - chr1_1:51335949-51335968 Msa0027080:intron 35.0%
TCAGAGTGATTCTTTCTTGT+TGG - chr1_1:51335991-51336010 Msa0027080:CDS 35.0%
TCATTCAAAAATTGGAAGGC+GGG + chr1_1:51336451-51336470 None:intergenic 35.0%
CTCATTCAAAAATTGGAAGG+CGG + chr1_1:51336452-51336471 None:intergenic 35.0%
! CCAATTTTTGAATGAGTAGG+CGG - chr1_1:51336456-51336475 Msa0027080:intron 35.0%
GTATATACAACCACTATGCA+AGG + chr1_1:51336548-51336567 None:intergenic 35.0%
!! CTTCATTTTAAAGAGGGGAT+AGG - chr1_1:51336721-51336740 Msa0027080:CDS 35.0%
TCACGAAAATGGACATACAA+AGG + chr1_1:51336772-51336791 None:intergenic 35.0%
! TATGTCCATTTTCGTGATTC+TGG - chr1_1:51336775-51336794 Msa0027080:intron 35.0%
!!! TCACTTTTTGAAGGGTTTTC+TGG + chr1_1:51336811-51336830 None:intergenic 35.0%
ATAACCAACCAACATCTGCT+TGG + chr1_1:51320065-51320084 None:intergenic 40.0%
TCTGATGTAGCTTGGATAGA+TGG - chr1_1:51320200-51320219 Msa0027080:three_prime_UTR 40.0%
!! CCGTTTTTCCTGAAGTACAA+AGG + chr1_1:51320262-51320281 None:intergenic 40.0%
CTCATACCATTAACCTGAAG+TGG + chr1_1:51320361-51320380 None:intergenic 40.0%
AAATTTGAACGGTTAGCGTC+TGG + chr1_1:51320736-51320755 None:intergenic 40.0%
! TTTTGCTTCCAGACTTACAC+GGG - chr1_1:51320814-51320833 Msa0027080:intron 40.0%
ATATATTCCCCGTGTAAGTC+TGG + chr1_1:51320825-51320844 None:intergenic 40.0%
CAATATAAAGGAGCAGGCTT+TGG - chr1_1:51320904-51320923 Msa0027080:intron 40.0%
CAGCAATAGCAAAAGGATGT+GGG + chr1_1:51320939-51320958 None:intergenic 40.0%
TCAGCAATAGCAAAAGGATG+TGG + chr1_1:51320940-51320959 None:intergenic 40.0%
! GAATTTTTCCACTAGGTGGA+TGG + chr1_1:51321017-51321036 None:intergenic 40.0%
! TTGGTAGTCTGACTGTATTG+TGG - chr1_1:51321045-51321064 Msa0027080:intron 40.0%
TCTGACTGTATTGTGGATGT+AGG - chr1_1:51321052-51321071 Msa0027080:intron 40.0%
! AGCCAGTCAATATTGGTTAG+TGG - chr1_1:51321096-51321115 Msa0027080:CDS 40.0%
CACCACTAACCAATATTGAC+TGG + chr1_1:51321101-51321120 None:intergenic 40.0%
ATTGGTTAGTGGTGAAAGTG+GGG - chr1_1:51321107-51321126 Msa0027080:CDS 40.0%
TATGCGCTATCTTGCTTACA+TGG - chr1_1:51321158-51321177 Msa0027080:intron 40.0%
ATGCGCTATCTTGCTTACAT+GGG - chr1_1:51321159-51321178 Msa0027080:intron 40.0%
GGACTAATTATCTTACCTCC+AGG + chr1_1:51321230-51321249 None:intergenic 40.0%
GTTTCCACTAATCTAGATGC+AGG + chr1_1:51321319-51321338 None:intergenic 40.0%
!! AAAGGCTTCTAGAACAGGAT+TGG + chr1_1:51321401-51321420 None:intergenic 40.0%
!! AATCCTGTTCTAGAAGCCTT+TGG - chr1_1:51321400-51321419 Msa0027080:intron 40.0%
!! TTTCCAAAGGCTTCTAGAAC+AGG + chr1_1:51321406-51321425 None:intergenic 40.0%
!! CAGTCGTTTTGGTAAGTTTG+TGG - chr1_1:51321559-51321578 Msa0027080:intron 40.0%
GGAGATTCAATTTGACCAGA+AGG - chr1_1:51321580-51321599 Msa0027080:intron 40.0%
AATGTACCCGTATAGTGGTT+TGG - chr1_1:51321880-51321899 Msa0027080:intron 40.0%
GTTTGGTAGAAAACCAGAGT+TGG - chr1_1:51321897-51321916 Msa0027080:intron 40.0%
AAAGGGAAAGAAACCAACTC+TGG + chr1_1:51321913-51321932 None:intergenic 40.0%
TTGTGATACAAGGAGAGCAA+TGG - chr1_1:51322197-51322216 Msa0027080:intron 40.0%
TAGCTTCCTGAATGGTGATT+GGG + chr1_1:51322340-51322359 None:intergenic 40.0%
ATAGCTTCCTGAATGGTGAT+TGG + chr1_1:51322341-51322360 None:intergenic 40.0%
TTTATCCAGGTGTGATGCAA+AGG - chr1_1:51322581-51322600 Msa0027080:intron 40.0%
! CAATCTTAGCTAAAGCGTCT+CGG + chr1_1:51322695-51322714 None:intergenic 40.0%
TAGCTAAGATTGTGTACACG+AGG - chr1_1:51322703-51322722 Msa0027080:intron 40.0%
TGTACACGAGGTTGTTTGAT+TGG - chr1_1:51322715-51322734 Msa0027080:intron 40.0%
! TTTTGTCATCTTTTGCAGGC+TGG - chr1_1:51322834-51322853 Msa0027080:intron 40.0%
AAAAACCAGCTTGTAAGGTG+AGG - chr1_1:51323028-51323047 Msa0027080:CDS 40.0%
AAAACCAGCTTGTAAGGTGA+GGG - chr1_1:51323029-51323048 Msa0027080:CDS 40.0%
TTCAAGCGAACATCCAAGAA+AGG - chr1_1:51323136-51323155 Msa0027080:intron 40.0%
ATCATTGGAGTTAAGTGCAG+TGG + chr1_1:51323188-51323207 None:intergenic 40.0%
! TCATTGCTTGGTAGTCATGA+TGG + chr1_1:51323213-51323232 None:intergenic 40.0%
TGACTACCAAGCAATGAAGA+TGG - chr1_1:51323216-51323235 Msa0027080:intron 40.0%
GAATGACCATCTTCATTGCT+TGG + chr1_1:51323225-51323244 None:intergenic 40.0%
! ATGTTGCTGGAGCTTTTCAT+TGG + chr1_1:51323493-51323512 None:intergenic 40.0%
!! GCTCCAGCAACATTTTAATC+AGG - chr1_1:51323500-51323519 Msa0027080:intron 40.0%
! TTGCAAGAGCACAAGTCAAA+CGG + chr1_1:51323850-51323869 None:intergenic 40.0%
GAGACAGCCAATCAACAAAA+TGG + chr1_1:51324019-51324038 None:intergenic 40.0%
CGATGGTTGCAAAATTTGGT+CGG - chr1_1:51324097-51324116 Msa0027080:CDS 40.0%
GATGGTTGCAAAATTTGGTC+GGG - chr1_1:51324098-51324117 Msa0027080:CDS 40.0%
! GCATACTAGCTTGTGATAGA+AGG - chr1_1:51324153-51324172 Msa0027080:CDS 40.0%
! TGGCTTCCAGAATATTTTCC+TGG - chr1_1:51324182-51324201 Msa0027080:CDS 40.0%
CACCATCCAGGAAAATATTC+TGG + chr1_1:51324191-51324210 None:intergenic 40.0%
ATGTTTAGATGGGTGAGAGA+CGG - chr1_1:51324539-51324558 Msa0027080:intron 40.0%
GATGACCATGATTAAAGGCA+TGG - chr1_1:51324573-51324592 Msa0027080:intron 40.0%
! AGGTCATCTTTTATCCGATG+TGG - chr1_1:51325531-51325550 Msa0027080:intron 40.0%
! GGTCATCTTTTATCCGATGT+GGG - chr1_1:51325532-51325551 Msa0027080:intron 40.0%
AGAAATAGTGCTCTTGCCAA+TGG + chr1_1:51325807-51325826 None:intergenic 40.0%
CCTGGGAAGTCAATAGTAAT+CGG - chr1_1:51326080-51326099 Msa0027080:CDS 40.0%
TCAATAGTAATCGGCCATTG+AGG - chr1_1:51326089-51326108 Msa0027080:CDS 40.0%
TTCATCTTTCAGAAACCTGG+AGG - chr1_1:51326540-51326559 Msa0027080:intron 40.0%
AAGTCACTGCGTGACAATTT+GGG + chr1_1:51326825-51326844 None:intergenic 40.0%
TTCACAATTGGCCATTATGC+TGG - chr1_1:51326843-51326862 Msa0027080:intron 40.0%
AACTTACATCGCCAGCATAA+TGG + chr1_1:51326857-51326876 None:intergenic 40.0%
ATTATGCTGGCGATGTAAGT+TGG - chr1_1:51326856-51326875 Msa0027080:intron 40.0%
TTATGCTGGCGATGTAAGTT+GGG - chr1_1:51326857-51326876 Msa0027080:intron 40.0%
TTCCAAATGCCCCTTTGTAT+CGG - chr1_1:51327114-51327133 Msa0027080:intron 40.0%
TTCAATAGGTTCCCGGTTTA+AGG - chr1_1:51327186-51327205 Msa0027080:intron 40.0%
!! GCTGGCTTGAGAAGATTATT+GGG + chr1_1:51327369-51327388 None:intergenic 40.0%
!! TGCTGGCTTGAGAAGATTAT+TGG + chr1_1:51327370-51327389 None:intergenic 40.0%
! AGTAAGTCTTGCACTTTTCC+TGG - chr1_1:51327431-51327450 Msa0027080:intron 40.0%
! TCTTGCACTTTTCCTGGTTT+TGG - chr1_1:51327437-51327456 Msa0027080:intron 40.0%
ATACCTACGATCCAAAGCTT+CGG + chr1_1:51327641-51327660 None:intergenic 40.0%
TTAATCTTCCTTCCTCGTCA+AGG - chr1_1:51327669-51327688 Msa0027080:intron 40.0%
AAAAAGCTAACACCTTGACG+AGG + chr1_1:51327684-51327703 None:intergenic 40.0%
!! ACATTTTGCCAGTTCTGATG+AGG - chr1_1:51327730-51327749 Msa0027080:intron 40.0%
TTGGAGAAGGTTGGACTTAA+AGG - chr1_1:51327773-51327792 Msa0027080:intron 40.0%
GGTTGGACTTAAAGGATATC+AGG - chr1_1:51327781-51327800 Msa0027080:intron 40.0%
AATAAAGTAGGTGGACCACA+TGG + chr1_1:51327816-51327835 None:intergenic 40.0%
CGCTCAAAGAATAAAGTAGG+TGG + chr1_1:51327825-51327844 None:intergenic 40.0%
TTATCTGGTTGAGTTTCTGC+TGG - chr1_1:51328068-51328087 Msa0027080:intron 40.0%
TATCTGGTTGAGTTTCTGCT+GGG - chr1_1:51328069-51328088 Msa0027080:intron 40.0%
GCTCTAATGGTCATGAAACA+TGG + chr1_1:51328127-51328146 None:intergenic 40.0%
TTCTCTTTATTGCGGCAGAT+TGG - chr1_1:51328279-51328298 Msa0027080:CDS 40.0%
! ACCAAAGTGTTTCTTAGAGC+TGG - chr1_1:51328306-51328325 Msa0027080:CDS 40.0%
!! ACCAGCTCTAAGAAACACTT+TGG + chr1_1:51328310-51328329 None:intergenic 40.0%
GTTTCTTAGAGCTGGTCAAA+TGG - chr1_1:51328314-51328333 Msa0027080:CDS 40.0%
AGTCAGCAAGCATTATTCAG+AGG - chr1_1:51328373-51328392 Msa0027080:intron 40.0%
AGCGAATCGAGACAAAACTT+CGG + chr1_1:51328422-51328441 None:intergenic 40.0%
CTTCTAGTCTGATCATTCAG+AGG - chr1_1:51328615-51328634 Msa0027080:CDS 40.0%
TCTATTCAAACTGGTATGCG+AGG - chr1_1:51328695-51328714 Msa0027080:intron 40.0%
CTATTCAAACTGGTATGCGA+GGG - chr1_1:51328696-51328715 Msa0027080:intron 40.0%
CTGAATGATAATAGCTGCAC+TGG + chr1_1:51328759-51328778 None:intergenic 40.0%
CAGTGCAGCTATTATCATTC+AGG - chr1_1:51328757-51328776 Msa0027080:intron 40.0%
! TTTTCCTCTCCATGCACATT+GGG + chr1_1:51329005-51329024 None:intergenic 40.0%
! AATGTTTTCCTGGGAGAAAG+AGG + chr1_1:51329068-51329087 None:intergenic 40.0%
!! CACTTTTGGGCATTGTTAGA+AGG - chr1_1:51329188-51329207 Msa0027080:intron 40.0%
GCAATGGTACAATGAGTATG+GGG + chr1_1:51329307-51329326 None:intergenic 40.0%
ATGTGGTGAGATTCATGCAA+TGG + chr1_1:51329323-51329342 None:intergenic 40.0%
GCATAAATCTCAGTTGCACT+TGG - chr1_1:51329363-51329382 Msa0027080:CDS 40.0%
!! ACTTGGCTGCATTTTGACAA+GGG - chr1_1:51329380-51329399 Msa0027080:intron 40.0%
CGCATGGGTGAAAATATAAG+TGG + chr1_1:51329476-51329495 None:intergenic 40.0%
! ATTTTCACCCATGCGCTTTT+TGG - chr1_1:51329481-51329500 Msa0027080:intron 40.0%
! TCCAAAACCAAAAAGCGCAT+GGG + chr1_1:51329491-51329510 None:intergenic 40.0%
! TTCCAAAACCAAAAAGCGCA+TGG + chr1_1:51329492-51329511 None:intergenic 40.0%
GAGCCTTTGATTGAGTTTCA+AGG + chr1_1:51329713-51329732 None:intergenic 40.0%
TACTGCACAGTTATGCAATC+CGG + chr1_1:51329835-51329854 None:intergenic 40.0%
!!! GACCATGCTATTTTGTCTGT+TGG - chr1_1:51329989-51330008 Msa0027080:intron 40.0%
!!! CAAGCTTATTTTTGGCAGCT+TGG + chr1_1:51330131-51330150 None:intergenic 40.0%
TGCAGCTTGAAAAACGCATT+AGG - chr1_1:51330181-51330200 Msa0027080:intron 40.0%
GCAGCTTGAAAAACGCATTA+GGG - chr1_1:51330182-51330201 Msa0027080:intron 40.0%
TGATGTGCTTAACACAGATC+AGG + chr1_1:51330272-51330291 None:intergenic 40.0%
TAGACAGAAACACACTGTCA+AGG - chr1_1:51330398-51330417 Msa0027080:intron 40.0%
AGACAGAAACACACTGTCAA+GGG - chr1_1:51330399-51330418 Msa0027080:intron 40.0%
! TCTCTCTGCTTCTCTTTTTG+AGG + chr1_1:51330580-51330599 None:intergenic 40.0%
AACTCAAGGTGAGCTGATTA+TGG - chr1_1:51330670-51330689 Msa0027080:intron 40.0%
ACTCAAGGTGAGCTGATTAT+GGG - chr1_1:51330671-51330690 Msa0027080:intron 40.0%
AGAAAGGTTGAAGCAAGCTT+TGG - chr1_1:51330858-51330877 Msa0027080:intron 40.0%
AGATATGGAAACCGAAAACC+AGG - chr1_1:51331100-51331119 Msa0027080:intron 40.0%
AAACCGAAAACCAGGTTCTT+CGG - chr1_1:51331108-51331127 Msa0027080:intron 40.0%
! CCTCATATACATGGGTTGAA+AGG + chr1_1:51331178-51331197 None:intergenic 40.0%
CCTTTCAACCCATGTATATG+AGG - chr1_1:51331175-51331194 Msa0027080:intron 40.0%
GTTGGAAAATGGTCACCATA+TGG - chr1_1:51331283-51331302 Msa0027080:intron 40.0%
CACATGTTGACGTTCAATGT+AGG + chr1_1:51331487-51331506 None:intergenic 40.0%
CCACTGGAAATCATTTGAAG+CGG - chr1_1:51331682-51331701 Msa0027080:intron 40.0%
! CCTTATCCAGATGATTGGTT+CGG - chr1_1:51331727-51331746 Msa0027080:intron 40.0%
CAGTGCAATTATGACATCGA+CGG + chr1_1:51331892-51331911 None:intergenic 40.0%
!!! TAAATGTTGCTTTTTGGCCC+TGG - chr1_1:51332106-51332125 Msa0027080:intron 40.0%
CTTGAACCATGAAACTACCA+GGG + chr1_1:51332126-51332145 None:intergenic 40.0%
ACTTGAACCATGAAACTACC+AGG + chr1_1:51332127-51332146 None:intergenic 40.0%
TTCCTATAAATAGGACCGGA+GGG + chr1_1:51332250-51332269 None:intergenic 40.0%
TTTCCTATAAATAGGACCGG+AGG + chr1_1:51332251-51332270 None:intergenic 40.0%
CAATAATTGATGTAGACCGG+AGG - chr1_1:51332293-51332312 Msa0027080:intron 40.0%
AGACGTATTTGACAGCCAAT+AGG + chr1_1:51332459-51332478 None:intergenic 40.0%
!!! GGATTTGGTGGTTTTCTAAC+TGG + chr1_1:51332539-51332558 None:intergenic 40.0%
ATTCTTCCAAAGAGGGATGT+CGG + chr1_1:51332560-51332579 None:intergenic 40.0%
CCATAGTCATTCTTCCAAAG+AGG + chr1_1:51332568-51332587 None:intergenic 40.0%
! CCTCTTTGGAAGAATGACTA+TGG - chr1_1:51332565-51332584 Msa0027080:intron 40.0%
TGATTTGATGCCTGAATTGC+AGG - chr1_1:51332641-51332660 Msa0027080:intron 40.0%
GATTTGATGCCTGAATTGCA+GGG - chr1_1:51332642-51332661 Msa0027080:intron 40.0%
! TGTTGCTTGAAAAGCAAAGC+AGG + chr1_1:51332741-51332760 None:intergenic 40.0%
ACTAGAGTAGAACACAATGG+AGG + chr1_1:51333001-51333020 None:intergenic 40.0%
GTGACTAGAGTAGAACACAA+TGG + chr1_1:51333004-51333023 None:intergenic 40.0%
GTGTTCTACTCTAGTCACAT+AGG - chr1_1:51333006-51333025 Msa0027080:CDS 40.0%
! GGTTTGTTTGGGATATTTGG+CGG - chr1_1:51333038-51333057 Msa0027080:intron 40.0%
GACGAATACCCTTTGATTCA+AGG + chr1_1:51333065-51333084 None:intergenic 40.0%
GGACGGTCATAAAATTCTAG+TGG - chr1_1:51333098-51333117 Msa0027080:intron 40.0%
CGGTCATAAAATTCTAGTGG+TGG - chr1_1:51333101-51333120 Msa0027080:intron 40.0%
TGGTGGTAAAGTTGAAATCC+TGG - chr1_1:51333118-51333137 Msa0027080:intron 40.0%
TTGTTAAGTGCAAAGTGGAC+TGG - chr1_1:51333144-51333163 Msa0027080:intron 40.0%
TTATGGTTCACTAATCCCGA+AGG - chr1_1:51333191-51333210 Msa0027080:intron 40.0%
GTACTGCTATATGCGTGTTT+GGG - chr1_1:51333293-51333312 Msa0027080:intron 40.0%
CTCTTTCATAGTGCAGAGAA+GGG + chr1_1:51333571-51333590 None:intergenic 40.0%
TCTCTTTCATAGTGCAGAGA+AGG + chr1_1:51333572-51333591 None:intergenic 40.0%
! ATCTTTTGGATAAGGACAGG+AGG + chr1_1:51333718-51333737 None:intergenic 40.0%
GATTGTTGCACATTCAGCAA+CGG - chr1_1:51333899-51333918 Msa0027080:intron 40.0%
CAGCAACGGAGAATATGTTA+AGG - chr1_1:51333913-51333932 Msa0027080:intron 40.0%
AACGGAGAATATGTTAAGGC+TGG - chr1_1:51333917-51333936 Msa0027080:intron 40.0%
!! TAAGGCTGGTTTAGCAGAAT+TGG - chr1_1:51333931-51333950 Msa0027080:intron 40.0%
GTTTAGCAGAATTGGAGCTA+TGG - chr1_1:51333939-51333958 Msa0027080:intron 40.0%
TTAATACCTCCTCCTTTGCT+TGG + chr1_1:51333970-51333989 None:intergenic 40.0%
!!! AGATTTTGAGTTAACCCGCT+TGG - chr1_1:51334004-51334023 Msa0027080:CDS 40.0%
!!! GATTTTGAGTTAACCCGCTT+GGG - chr1_1:51334005-51334024 Msa0027080:CDS 40.0%
CTAAATTAGCCCACCTAAAC+TGG + chr1_1:51334105-51334124 None:intergenic 40.0%
TTACCTATGCCTACTCTGTA+TGG - chr1_1:51334192-51334211 Msa0027080:intron 40.0%
ACTGCAAACCCAAGACAATT+TGG + chr1_1:51334257-51334276 None:intergenic 40.0%
TGAGCTCAAACACATAAGAC+AGG - chr1_1:51334296-51334315 Msa0027080:CDS 40.0%
AAACACATAAGACAGGCAGT+TGG - chr1_1:51334303-51334322 Msa0027080:CDS 40.0%
AAGATCTGACAATTTCGCCT+TGG - chr1_1:51334457-51334476 Msa0027080:CDS 40.0%
AGATCTGACAATTTCGCCTT+GGG - chr1_1:51334458-51334477 Msa0027080:CDS 40.0%
TTTCGCCTTGGGTTTATCAT+AGG - chr1_1:51334469-51334488 Msa0027080:CDS 40.0%
TACCCAACTTACTAGCAACA+TGG - chr1_1:51334642-51334661 Msa0027080:intron 40.0%
! TTCCATAAATCAGCCTTGTG+AGG - chr1_1:51334737-51334756 Msa0027080:CDS 40.0%
TATCGTCGGACAACTTCAAT+GGG + chr1_1:51334900-51334919 None:intergenic 40.0%
ATATCGTCGGACAACTTCAA+TGG + chr1_1:51334901-51334920 None:intergenic 40.0%
! TACAGTAGTTCAGGTTTGCT+TGG - chr1_1:51335059-51335078 Msa0027080:intron 40.0%
CAGATGGATAGATACTTACG+GGG + chr1_1:51335332-51335351 None:intergenic 40.0%
CTATCACAGAAAGCTTCAGA+TGG + chr1_1:51335348-51335367 None:intergenic 40.0%
! TTGGGTGTTGTATCAAAGAC+AGG + chr1_1:51335413-51335432 None:intergenic 40.0%
AACTCATGGAAGACAGTGTT+GGG + chr1_1:51335431-51335450 None:intergenic 40.0%
TCTGCATTTAGTCCTAACGA+TGG - chr1_1:51335623-51335642 Msa0027080:intron 40.0%
ACAGAGTATGCACACTTTAC+TGG - chr1_1:51335807-51335826 Msa0027080:CDS 40.0%
CAGAGTATGCACACTTTACT+GGG - chr1_1:51335808-51335827 Msa0027080:CDS 40.0%
ACTTTCCTCTCTCATAGCAA+TGG + chr1_1:51336104-51336123 None:intergenic 40.0%
AGAGGTCATCAACTGAGAAT+GGG + chr1_1:51336366-51336385 None:intergenic 40.0%
AAAATCTCTCTCTTGCAGTG+AGG + chr1_1:51336392-51336411 None:intergenic 40.0%
CCGCCTACTCATTCAAAAAT+TGG + chr1_1:51336459-51336478 None:intergenic 40.0%
ATAAACAAGATGCAGCAGGA+TGG + chr1_1:51336621-51336640 None:intergenic 40.0%
CATGATAAACAAGATGCAGC+AGG + chr1_1:51336625-51336644 None:intergenic 40.0%
!!! GCTCAGCTTCACTTTTTGAA+GGG + chr1_1:51336819-51336838 None:intergenic 40.0%
!!! AGCTCAGCTTCACTTTTTGA+AGG + chr1_1:51336820-51336839 None:intergenic 40.0%
GCTGCTTACAATTGTGTTTG+TGG - chr1_1:51336837-51336856 Msa0027080:intron 40.0%
TACAGACACCAAGCAGATGT+TGG - chr1_1:51320054-51320073 Msa0027080:three_prime_UTR 45.0%
GTTCTGACACTCTGCATTGT+AGG - chr1_1:51320130-51320149 Msa0027080:three_prime_UTR 45.0%
! TATTGTTGGTGCCCAGGTTT+GGG - chr1_1:51320169-51320188 Msa0027080:three_prime_UTR 45.0%
TGGAGGATTCTGATGTAGCT+TGG - chr1_1:51320192-51320211 Msa0027080:three_prime_UTR 45.0%
TATCATCCACTCCACATGGT+GGG + chr1_1:51320627-51320646 None:intergenic 45.0%
ATATCATCCACTCCACATGG+TGG + chr1_1:51320628-51320647 None:intergenic 45.0%
GTCATATCATCCACTCCACA+TGG + chr1_1:51320631-51320650 None:intergenic 45.0%
! CTCAGATTATCTAGGACACC+AGG + chr1_1:51320676-51320695 None:intergenic 45.0%
TTTGCTTCCAGACTTACACG+GGG - chr1_1:51320815-51320834 Msa0027080:intron 45.0%
ATGGCGCAATATAAAGGAGC+AGG - chr1_1:51320898-51320917 Msa0027080:intron 45.0%
CTATTGCTGACGCAGCATAT+AGG - chr1_1:51320950-51320969 Msa0027080:CDS 45.0%
GGGAATCAGCCAGTCAATAT+TGG - chr1_1:51321089-51321108 Msa0027080:CDS 45.0%
GCTATCTTGCTTACATGGGA+GGG - chr1_1:51321163-51321182 Msa0027080:intron 45.0%
GGAAAATGAGGCCAATTCAG+AGG + chr1_1:51321354-51321373 None:intergenic 45.0%
CATAAAAGGGGGGGAAAATG+AGG + chr1_1:51321366-51321385 None:intergenic 45.0%
GCACTGCATCAATATAAGGG+AGG + chr1_1:51321482-51321501 None:intergenic 45.0%
! TGTGACTTCTGCAGTCGTTT+TGG - chr1_1:51321548-51321567 Msa0027080:intron 45.0%
GACCAGAAGGGAAGAATTTC+TGG - chr1_1:51321593-51321612 Msa0027080:intron 45.0%
CTCCAGAAATTCTTCCCTTC+TGG + chr1_1:51321598-51321617 None:intergenic 45.0%
TGCTATCAGAACTTACCTGC+TGG - chr1_1:51321619-51321638 Msa0027080:CDS 45.0%
AAACACGTGATCTTTCCAGC+AGG + chr1_1:51321637-51321656 None:intergenic 45.0%
ATCACGTGTTTGCCAGTTGT+CGG - chr1_1:51321646-51321665 Msa0027080:CDS 45.0%
TCACCATCTGAGTGAACTGT+CGG - chr1_1:51321855-51321874 Msa0027080:intron 45.0%
AGGAGAGCAATGGATGTTGT+TGG - chr1_1:51322207-51322226 Msa0027080:intron 45.0%
CGCCCAAGGATGAAAAATCT+CGG - chr1_1:51322435-51322454 Msa0027080:intron 45.0%
! CCTGACTCGAAGTCCTTAAT+CGG - chr1_1:51322889-51322908 Msa0027080:intron 45.0%
! AATATCCAGCACGCCGATTA+AGG + chr1_1:51322905-51322924 None:intergenic 45.0%
ATCGGCGTGCTGGATATTTA+TGG - chr1_1:51322907-51322926 Msa0027080:intron 45.0%
AAACCAGCTTGTAAGGTGAG+GGG - chr1_1:51323030-51323049 Msa0027080:CDS 45.0%
!! CGGAGTAATTCAAGTTGGAG+CGG + chr1_1:51323278-51323297 None:intergenic 45.0%
GCAATGTACACAGAACAACG+AGG + chr1_1:51323442-51323461 None:intergenic 45.0%
! TGCAAGAGCACAAGTCAAAC+GGG + chr1_1:51323849-51323868 None:intergenic 45.0%
AGGGCGATGGTTGCAAAATT+TGG - chr1_1:51324093-51324112 Msa0027080:CDS 45.0%
CTTGTGATAGAAGGGTAGTG+TGG - chr1_1:51324162-51324181 Msa0027080:CDS 45.0%
TTCCTGGATGGTGACTTGAA+TGG - chr1_1:51324198-51324217 Msa0027080:CDS 45.0%
AACCATTCAAGTCACCATCC+AGG + chr1_1:51324203-51324222 None:intergenic 45.0%
!! CATGCCTAGACTTGGTTTTC+TGG + chr1_1:51324243-51324262 None:intergenic 45.0%
TGTTTAGATGGGTGAGAGAC+GGG - chr1_1:51324540-51324559 Msa0027080:intron 45.0%
CTAGCACAACCTCACAAAAC+CGG - chr1_1:51325467-51325486 Msa0027080:CDS 45.0%
! GCGAAGTTTTACACGTTCCT+GGG - chr1_1:51326063-51326082 Msa0027080:CDS 45.0%
!! CCGATTACTATTGACTTCCC+AGG + chr1_1:51326083-51326102 None:intergenic 45.0%
AGAAGAGCAATAATGCCTCC+AGG + chr1_1:51326558-51326577 None:intergenic 45.0%
TTGCTCTTCTCGATGAAGCT+TGG - chr1_1:51326568-51326587 Msa0027080:intron 45.0%
CAGTTCAAAGGGACAGTACA+GGG + chr1_1:51326602-51326621 None:intergenic 45.0%
CTGTCCCTTTGAACTGGTAT+TGG - chr1_1:51326606-51326625 Msa0027080:intron 45.0%
!!! TGGGCTTGCTGAACCTTTTA+TGG + chr1_1:51326806-51326825 None:intergenic 45.0%
GAAGTCACTGCGTGACAATT+TGG + chr1_1:51326826-51326845 None:intergenic 45.0%
TCACGCAGTGACTTCACAAT+TGG - chr1_1:51326831-51326850 Msa0027080:intron 45.0%
TCCAAATGCCCCTTTGTATC+GGG - chr1_1:51327115-51327134 Msa0027080:intron 45.0%
TTAGATGATTCCTCGGGTGA+GGG + chr1_1:51327151-51327170 None:intergenic 45.0%
ATTAGATGATTCCTCGGGTG+AGG + chr1_1:51327152-51327171 None:intergenic 45.0%
! ATAGGTTCCCGGTTTAAGGT+TGG - chr1_1:51327190-51327209 Msa0027080:intron 45.0%
TGCTGCAGGACATATGAACA+GGG + chr1_1:51327282-51327301 None:intergenic 45.0%
TTGCTGCAGGACATATGAAC+AGG + chr1_1:51327283-51327302 None:intergenic 45.0%
GTGCTTGTAATTGTTGCTGC+AGG + chr1_1:51327296-51327315 None:intergenic 45.0%
! TGTCTTCTTGTAGGGTGTCA+TGG - chr1_1:51327534-51327553 Msa0027080:intron 45.0%
TACCTACGATCCAAAGCTTC+GGG + chr1_1:51327640-51327659 None:intergenic 45.0%
!! TTGCAAGCGGATTTTGGAGA+AGG - chr1_1:51327760-51327779 Msa0027080:intron 45.0%
!! AAGCGGATTTTGGAGAAGGT+TGG - chr1_1:51327764-51327783 Msa0027080:intron 45.0%
!! GTCGAGATTTGTGGCTCTAA+TGG + chr1_1:51328140-51328159 None:intergenic 45.0%
GAGGAAAGTTCGCTCCTATT+TGG - chr1_1:51328392-51328411 Msa0027080:intron 45.0%
AATCGAGACAAAACTTCGGC+GGG + chr1_1:51328418-51328437 None:intergenic 45.0%
GAATCGAGACAAAACTTCGG+CGG + chr1_1:51328419-51328438 None:intergenic 45.0%
! TGTTCACAGGACAACTTGCT+CGG - chr1_1:51328564-51328583 Msa0027080:CDS 45.0%
ACTTGCTCGGCAAGTATATG+AGG - chr1_1:51328577-51328596 Msa0027080:CDS 45.0%
CTTGCTCGGCAAGTATATGA+GGG - chr1_1:51328578-51328597 Msa0027080:CDS 45.0%
GGCAAGTATATGAGGGATTG+CGG - chr1_1:51328585-51328604 Msa0027080:CDS 45.0%
GTTTCCGCATGCATATTGCT+AGG - chr1_1:51328639-51328658 Msa0027080:intron 45.0%
CCTTCCTAGCAATATGCATG+CGG + chr1_1:51328646-51328665 None:intergenic 45.0%
! CTTTTCCTCTCCATGCACAT+TGG + chr1_1:51329006-51329025 None:intergenic 45.0%
CATGGAGAGGAAAAGTTGCT+CGG - chr1_1:51329011-51329030 Msa0027080:intron 45.0%
AATAAGGTGCGGCTAGTGTT+AGG + chr1_1:51329239-51329258 None:intergenic 45.0%
CAATGAGTATGGGGTGAACT+TGG + chr1_1:51329298-51329317 None:intergenic 45.0%
!! CACTTGGCTGCATTTTGACA+AGG - chr1_1:51329379-51329398 Msa0027080:intron 45.0%
!!! ACCCATGCGCTTTTTGGTTT+TGG - chr1_1:51329487-51329506 Msa0027080:intron 45.0%
ACAAATGACCTGCAGAGCTT+TGG + chr1_1:51329643-51329662 None:intergenic 45.0%
GTGAAATCTATGGCAGGACA+AGG + chr1_1:51329751-51329770 None:intergenic 45.0%
GTAAGGGTGAAATCTATGGC+AGG + chr1_1:51329757-51329776 None:intergenic 45.0%
TATCAGGCTGCAAGAGAAAC+CGG - chr1_1:51330099-51330118 Msa0027080:CDS 45.0%
! ATTGCTTCAAAAGGAGCGTG+AGG - chr1_1:51330554-51330573 Msa0027080:intron 45.0%
GAGGTTCCTGTTGTTGATCA+TGG - chr1_1:51330615-51330634 Msa0027080:intron 45.0%
ACCATTAATCCTGCACTACC+TGG - chr1_1:51330749-51330768 Msa0027080:intron 45.0%
TCCAGGTAGTGCAGGATTAA+TGG + chr1_1:51330753-51330772 None:intergenic 45.0%
!! TTGCCGAAGAACCTGGTTTT+CGG + chr1_1:51331114-51331133 None:intergenic 45.0%
!! GTTGAAAGGTGCTCTGACAT+TGG + chr1_1:51331164-51331183 None:intergenic 45.0%
CCGCTTCAAATGATTTCCAG+TGG + chr1_1:51331685-51331704 None:intergenic 45.0%
GATCGCCTTATCCAGATGAT+TGG - chr1_1:51331722-51331741 Msa0027080:intron 45.0%
CCGAACCAATCATCTGGATA+AGG + chr1_1:51331730-51331749 None:intergenic 45.0%
CAATTGCCGAACCAATCATC+TGG + chr1_1:51331736-51331755 None:intergenic 45.0%
!! GATGATTGGTTCGGCAATTG+AGG - chr1_1:51331736-51331755 Msa0027080:intron 45.0%
! TTTTGGCCCTGGTAGTTTCA+TGG - chr1_1:51332117-51332136 Msa0027080:intron 45.0%
! TTGATTCTGGAAAGTGAGCG+TGG + chr1_1:51332417-51332436 None:intergenic 45.0%
GATCGAAAACCCTGCAATTC+AGG + chr1_1:51332654-51332673 None:intergenic 45.0%
!! GCTTTTCAAGCAACAGCTCA+CGG - chr1_1:51332746-51332765 Msa0027080:intron 45.0%
TTTGGCGGTCCTTGAATCAA+AGG - chr1_1:51333053-51333072 Msa0027080:intron 45.0%
TTGGCGGTCCTTGAATCAAA+GGG - chr1_1:51333054-51333073 Msa0027080:intron 45.0%
AGAAACCCTCAAGCATCCTA+TGG + chr1_1:51333217-51333236 None:intergenic 45.0%
GTTTGTAGTTGTTAGGTCGC+TGG - chr1_1:51333271-51333290 Msa0027080:intron 45.0%
GGTACTGCTATATGCGTGTT+TGG - chr1_1:51333292-51333311 Msa0027080:intron 45.0%
TGCTATATGCGTGTTTGGGT+GGG - chr1_1:51333297-51333316 Msa0027080:intron 45.0%
!!! CGTAGTTGTTTTGGTTGCCA+TGG - chr1_1:51333811-51333830 Msa0027080:intron 45.0%
TGATTGGCAGTCTTCTTCTG+CGG - chr1_1:51333873-51333892 Msa0027080:intron 45.0%
! ATTCTCTCTGGTGCCAGTTT+AGG - chr1_1:51334089-51334108 Msa0027080:intron 45.0%
AAGCCATACAGAGTAGGCAT+AGG + chr1_1:51334198-51334217 None:intergenic 45.0%
! TGCCTACTCTGTATGGCTTT+TGG - chr1_1:51334199-51334218 Msa0027080:intron 45.0%
! GCCTACTCTGTATGGCTTTT+GGG - chr1_1:51334200-51334219 Msa0027080:intron 45.0%
ACCCAAAAGCCATACAGAGT+AGG + chr1_1:51334204-51334223 None:intergenic 45.0%
!!! CTCTGTATGGCTTTTGGGTT+TGG - chr1_1:51334205-51334224 Msa0027080:CDS 45.0%
TCTTGGGTTTGCAGTATGCT+GGG - chr1_1:51334262-51334281 Msa0027080:CDS 45.0%
AAGACAGGCAGTTGGATTCT+TGG - chr1_1:51334311-51334330 Msa0027080:CDS 45.0%
! TGGGAGCATAACATGATGCT+TGG + chr1_1:51334416-51334435 None:intergenic 45.0%
ATCCTGTCTAAATACCCACG+TGG - chr1_1:51334496-51334515 Msa0027080:CDS 45.0%
! CATAAATCAGCCTTGTGAGG+CGG - chr1_1:51334740-51334759 Msa0027080:CDS 45.0%
! ATAAATCAGCCTTGTGAGGC+GGG - chr1_1:51334741-51334760 Msa0027080:CDS 45.0%
!! TGGCATGGATGTAATGGGTT+AGG + chr1_1:51334842-51334861 None:intergenic 45.0%
GCAGATGGCATGGATGTAAT+GGG + chr1_1:51334847-51334866 None:intergenic 45.0%
AGCAGATGGCATGGATGTAA+TGG + chr1_1:51334848-51334867 None:intergenic 45.0%
ATCTGATGTAGCAGATGGCA+TGG + chr1_1:51334857-51334876 None:intergenic 45.0%
TGCCATCTGCTACATCAGAT+TGG - chr1_1:51334857-51334876 Msa0027080:intron 45.0%
GCCATCTGCTACATCAGATT+GGG - chr1_1:51334858-51334877 Msa0027080:intron 45.0%
CCATCTGCTACATCAGATTG+GGG - chr1_1:51334859-51334878 Msa0027080:intron 45.0%
TGCTACATCAGATTGGGGAA+AGG - chr1_1:51334864-51334883 Msa0027080:intron 45.0%
! CCATTAGCTTCAACATTGGG+AGG + chr1_1:51335005-51335024 None:intergenic 45.0%
CCTCCCAATGTTGAAGCTAA+TGG - chr1_1:51335002-51335021 Msa0027080:intron 45.0%
CAACTCATGGAAGACAGTGT+TGG + chr1_1:51335432-51335451 None:intergenic 45.0%
TTCAAGAGCTCGTCAACTCA+TGG + chr1_1:51335445-51335464 None:intergenic 45.0%
!! TCCTAACGATGGATTGGACA+AGG - chr1_1:51335634-51335653 Msa0027080:intron 45.0%
TCCTTGTCCAATCCATCGTT+AGG + chr1_1:51335638-51335657 None:intergenic 45.0%
TCAGGTCCTTTCAAGCATGA+AGG - chr1_1:51335940-51335959 Msa0027080:intron 45.0%
!! CATGAAGGTACTTATGGCTG+AGG - chr1_1:51335955-51335974 Msa0027080:intron 45.0%
TCTTGTTGGACGATACTTCC+AGG - chr1_1:51336005-51336024 Msa0027080:CDS 45.0%
CATAAACAAGCACTCTCACC+TGG + chr1_1:51336026-51336045 None:intergenic 45.0%
!! CAGGTGAGAGTGCTTGTTTA+TGG - chr1_1:51336024-51336043 Msa0027080:CDS 45.0%
GAGAGGTCATCAACTGAGAA+TGG + chr1_1:51336367-51336386 None:intergenic 45.0%
! TTTTGAATGAGTAGGCGGCA+AGG - chr1_1:51336461-51336480 Msa0027080:intron 45.0%
TTTGAATGAGTAGGCGGCAA+GGG - chr1_1:51336462-51336481 Msa0027080:intron 45.0%
!! TTCAAAATTAAATTATATAA+CGG + chr1_1:51324765-51324784 None:intergenic 5.0%
!! TATATATAATTATAATATGT+AGG - chr1_1:51326925-51326944 Msa0027080:intron 5.0%
!! ATATATAATTATAATATGTA+GGG - chr1_1:51326926-51326945 Msa0027080:intron 5.0%
!! TAATTAATTCTATTATTATA+AGG + chr1_1:51329942-51329961 None:intergenic 5.0%
GACACCAAGCAGATGTTGGT+TGG - chr1_1:51320058-51320077 Msa0027080:three_prime_UTR 50.0%
AACAATAGGAGTGGCAGCAG+TGG + chr1_1:51320156-51320175 None:intergenic 50.0%
ACTGCTGCCACTCCTATTGT+TGG - chr1_1:51320155-51320174 Msa0027080:three_prime_UTR 50.0%
CAAACCTGGGCACCAACAAT+AGG + chr1_1:51320170-51320189 None:intergenic 50.0%
! CTATTGTTGGTGCCCAGGTT+TGG - chr1_1:51320168-51320187 Msa0027080:three_prime_UTR 50.0%
AGAATCCTCCACCCAAACCT+GGG + chr1_1:51320183-51320202 None:intergenic 50.0%
TGTAGCTTGGATAGATGGCG+AGG - chr1_1:51320205-51320224 Msa0027080:three_prime_UTR 50.0%
TTGGATAGATGGCGAGGTCT+TGG - chr1_1:51320211-51320230 Msa0027080:three_prime_UTR 50.0%
GCGAGGTCTTGGAGGTTAAT+GGG - chr1_1:51320222-51320241 Msa0027080:three_prime_UTR 50.0%
CGAGGTCTTGGAGGTTAATG+GGG - chr1_1:51320223-51320242 Msa0027080:three_prime_UTR 50.0%
ATCATCCACTCCACATGGTG+GGG + chr1_1:51320626-51320645 None:intergenic 50.0%
CTTGCTTACCTGCATGAACC+TGG - chr1_1:51320655-51320674 Msa0027080:intron 50.0%
GCTGCGTCAGCAATAGCAAA+AGG + chr1_1:51320946-51320965 None:intergenic 50.0%
TAGTCTGACCATCCACCTAG+TGG - chr1_1:51321006-51321025 Msa0027080:intron 50.0%
CGCTATCTTGCTTACATGGG+AGG - chr1_1:51321162-51321181 Msa0027080:intron 50.0%
AACTGTCGAGCAGAAAGTCC+TGG - chr1_1:51321209-51321228 Msa0027080:intron 50.0%
TCCTTTCAGGATCCGACAAC+TGG + chr1_1:51321661-51321680 None:intergenic 50.0%
CACCATCTGAGTGAACTGTC+GGG - chr1_1:51321856-51321875 Msa0027080:intron 50.0%
CTTCCTGAATGGTGATTGGG+AGG + chr1_1:51322337-51322356 None:intergenic 50.0%
AAGTGCCTTTGCATCACACC+TGG + chr1_1:51322589-51322608 None:intergenic 50.0%
CCGATTAAGGACTTCGAGTC+AGG + chr1_1:51322892-51322911 None:intergenic 50.0%
TGGAGCGGTTCGAAATACAG+TGG + chr1_1:51323263-51323282 None:intergenic 50.0%
GTTTAGATGGGTGAGAGACG+GGG - chr1_1:51324541-51324560 Msa0027080:intron 50.0%
TTTAGATGGGTGAGAGACGG+GGG - chr1_1:51324542-51324561 Msa0027080:intron 50.0%
!! CGGTTTTGTGAGGTTGTGCT+AGG + chr1_1:51325469-51325488 None:intergenic 50.0%
GTAATCCTCACCACACAAGC+CGG + chr1_1:51325489-51325508 None:intergenic 50.0%
!! ATTTTCCCCGTGGATTGCAC+AGG - chr1_1:51325712-51325731 Msa0027080:intron 50.0%
! GGCGAAGTTTTACACGTTCC+TGG - chr1_1:51326062-51326081 Msa0027080:CDS 50.0%
AGCATCACTCAGCACCTCAA+TGG + chr1_1:51326106-51326125 None:intergenic 50.0%
GTGTCACACAAGCATGACAC+TGG - chr1_1:51326213-51326232 Msa0027080:intron 50.0%
CCAGTTCAAAGGGACAGTAC+AGG + chr1_1:51326603-51326622 None:intergenic 50.0%
CCTGTACTGTCCCTTTGAAC+TGG - chr1_1:51326600-51326619 Msa0027080:intron 50.0%
!! ACCCGATACAAAGGGGCATT+TGG + chr1_1:51327119-51327138 None:intergenic 50.0%
TTTATTTGTCCCCTCACCCG+AGG - chr1_1:51327138-51327157 Msa0027080:intron 50.0%
TAGATGATTCCTCGGGTGAG+GGG + chr1_1:51327150-51327169 None:intergenic 50.0%
! CTTCTTGTAGGGTGTCATGG+AGG - chr1_1:51327537-51327556 Msa0027080:intron 50.0%
CAATCAGGATAAGCTGCGCT+GGG - chr1_1:51327560-51327579 Msa0027080:intron 50.0%
AGCTAACACCTTGACGAGGA+AGG + chr1_1:51327680-51327699 None:intergenic 50.0%
AGCGGTAACCTCATCAGAAC+TGG + chr1_1:51327741-51327760 None:intergenic 50.0%
ATGAGGTTACCGCTTGCAAG+CGG - chr1_1:51327747-51327766 Msa0027080:intron 50.0%
!! TACCGCTTGCAAGCGGATTT+TGG - chr1_1:51327754-51327773 Msa0027080:intron 50.0%
CTCCAAAATCCGCTTGCAAG+CGG + chr1_1:51327759-51327778 None:intergenic 50.0%
AAAACTTCGGCGGGCCAAAT+AGG + chr1_1:51328409-51328428 None:intergenic 50.0%
CAGTTACAAGCTGCATGCAG+AGG - chr1_1:51328453-51328472 Msa0027080:intron 50.0%
ATATGAGGGATTGCGGCAAG+AGG - chr1_1:51328592-51328611 Msa0027080:CDS 50.0%
CCGCATGCATATTGCTAGGA+AGG - chr1_1:51328643-51328662 Msa0027080:intron 50.0%
TCAAACTGGTATGCGAGGGA+TGG - chr1_1:51328700-51328719 Msa0027080:intron 50.0%
GATGGTGTGCCAAGTATCTC+CGG + chr1_1:51328949-51328968 None:intergenic 50.0%
CAATTGCCACCCAATGTGCA+TGG - chr1_1:51328993-51329012 Msa0027080:intron 50.0%
GGTAACTACCTCTTTCTCCC+AGG - chr1_1:51329057-51329076 Msa0027080:intron 50.0%
!! GGCTGCATTTTGACAAGGGA+AGG - chr1_1:51329384-51329403 Msa0027080:intron 50.0%
ATCCAGTACCAAAGCTCTGC+AGG - chr1_1:51329632-51329651 Msa0027080:intron 50.0%
CAAGCTGCAGCCTCAATGTA+AGG + chr1_1:51330170-51330189 None:intergenic 50.0%
!! AGAGAGAGTGCCTGTCATAC+AGG - chr1_1:51330593-51330612 Msa0027080:intron 50.0%
ACAGGAACCTCCTGTATGAC+AGG + chr1_1:51330606-51330625 None:intergenic 50.0%
CATTTCCAGTGAGCTCACCA+AGG + chr1_1:51330788-51330807 None:intergenic 50.0%
TAAATGGTGAACGCGGCAAC+AGG + chr1_1:51331650-51331669 None:intergenic 50.0%
CTCCCTCCGGTCCTATTTAT+AGG - chr1_1:51332245-51332264 Msa0027080:intron 50.0%
AAGAGGGATGTCGGATTTGG+TGG + chr1_1:51332551-51332570 None:intergenic 50.0%
CCAAAGAGGGATGTCGGATT+TGG + chr1_1:51332554-51332573 None:intergenic 50.0%
CCAAATCCGACATCCCTCTT+TGG - chr1_1:51332551-51332570 Msa0027080:intron 50.0%
ACCTTGCGTACAACCTCCAA+CGG + chr1_1:51332705-51332724 None:intergenic 50.0%
!! GTGGACTGGTTTCCGATATC+CGG - chr1_1:51333158-51333177 Msa0027080:intron 50.0%
TCACTAATCCCGAAGGCCAT+AGG - chr1_1:51333198-51333217 Msa0027080:intron 50.0%
TCAAGCATCCTATGGCCTTC+GGG + chr1_1:51333209-51333228 None:intergenic 50.0%
CTCAAGCATCCTATGGCCTT+CGG + chr1_1:51333210-51333229 None:intergenic 50.0%
GAAGGCCATAGGATGCTTGA+GGG - chr1_1:51333209-51333228 Msa0027080:intron 50.0%
CTGCTATATGCGTGTTTGGG+TGG - chr1_1:51333296-51333315 Msa0027080:intron 50.0%
ATATGCGTGTTTGGGTGGGT+AGG - chr1_1:51333301-51333320 Msa0027080:intron 50.0%
TGGGTAGGTGTGCTTATTCC+TGG - chr1_1:51333316-51333335 Msa0027080:intron 50.0%
AAGATTCTCCCATGGGTCAC+TGG - chr1_1:51333520-51333539 Msa0027080:intron 50.0%
ATACTCTGCCAGTGACCCAT+GGG + chr1_1:51333531-51333550 None:intergenic 50.0%
!! AGTGCAGAGAAGGGTGTTGA+GGG + chr1_1:51333562-51333581 None:intergenic 50.0%
!! TAGTGCAGAGAAGGGTGTTG+AGG + chr1_1:51333563-51333582 None:intergenic 50.0%
TTGAGTTAACCCGCTTGGGT+TGG - chr1_1:51334009-51334028 Msa0027080:CDS 50.0%
!! GTGGTATTGGCTTGGGATCT+GGG - chr1_1:51334036-51334055 Msa0027080:CDS 50.0%
GAATCGAACCTGAGACCTCA+AGG + chr1_1:51334073-51334092 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCTC+TGG - chr1_1:51334077-51334096 Msa0027080:intron 50.0%
! TCTCTGGTGCCAGTTTAGGT+GGG - chr1_1:51334093-51334112 Msa0027080:intron 50.0%
GTCTTGGGTTTGCAGTATGC+TGG - chr1_1:51334261-51334280 Msa0027080:CDS 50.0%
TGCAGTATGCTGGGACATCT+TGG - chr1_1:51334271-51334290 Msa0027080:CDS 50.0%
GCAGTATGCTGGGACATCTT+GGG - chr1_1:51334272-51334291 Msa0027080:CDS 50.0%
TGCCACGTGGGTATTTAGAC+AGG + chr1_1:51334501-51334520 None:intergenic 50.0%
!! AACATGGATAGCGCTGACAC+AGG - chr1_1:51334658-51334677 Msa0027080:intron 50.0%
!!! GATAGCGCTGACACAGGTTT+TGG - chr1_1:51334664-51334683 Msa0027080:intron 50.0%
! CGCCTCACAAGGCTGATTTA+TGG + chr1_1:51334742-51334761 None:intergenic 50.0%
! TAAATCAGCCTTGTGAGGCG+GGG - chr1_1:51334742-51334761 Msa0027080:CDS 50.0%
CCCCAATCTGATGTAGCAGA+TGG + chr1_1:51334862-51334881 None:intergenic 50.0%
ACCTGCCATTGCTATGAGAG+AGG - chr1_1:51336096-51336115 Msa0027080:CDS 50.0%
TCCTCTCTCATAGCAATGGC+AGG + chr1_1:51336100-51336119 None:intergenic 50.0%
TCTCTTGCAGTGAGGTAGAG+AGG + chr1_1:51336384-51336403 None:intergenic 50.0%
TTCTCGAGAAGCTCATCTGC+TGG + chr1_1:51336427-51336446 None:intergenic 50.0%
AAGGCAACGAAATCCGTTGC+TGG - chr1_1:51336521-51336540 Msa0027080:intron 50.0%
CACTATGCAAGGACCAGCAA+CGG + chr1_1:51336537-51336556 None:intergenic 50.0%
CTGGGCACCAACAATAGGAG+TGG + chr1_1:51320165-51320184 None:intergenic 55.0%
! CACTCCTATTGTTGGTGCCC+AGG - chr1_1:51320163-51320182 Msa0027080:three_prime_UTR 55.0%
CAGAATCCTCCACCCAAACC+TGG + chr1_1:51320184-51320203 None:intergenic 55.0%
GATAGATGGCGAGGTCTTGG+AGG - chr1_1:51320214-51320233 Msa0027080:three_prime_UTR 55.0%
GGCGAGGTCTTGGAGGTTAA+TGG - chr1_1:51320221-51320240 Msa0027080:three_prime_UTR 55.0%
GATACAGAAGCCCCACCATG+TGG - chr1_1:51320613-51320632 Msa0027080:intron 55.0%
CTAGGACACCAGGTTCATGC+AGG + chr1_1:51320666-51320685 None:intergenic 55.0%
GTTAGTGGTGAAAGTGGGGC+TGG - chr1_1:51321111-51321130 Msa0027080:CDS 55.0%
GGGAGAGCTAATGCTGCTGA+AGG - chr1_1:51321183-51321202 Msa0027080:intron 55.0%
TGTCGAGCAGAAAGTCCTGG+AGG - chr1_1:51321212-51321231 Msa0027080:intron 55.0%
GCCAGTTGTCGGATCCTGAA+AGG - chr1_1:51321657-51321676 Msa0027080:intron 55.0%
TGCCCGACAGTTCACTCAGA+TGG + chr1_1:51321861-51321880 None:intergenic 55.0%
CGGGCAATGTACCCGTATAG+TGG - chr1_1:51321875-51321894 Msa0027080:intron 55.0%
CTGAATGGTGATTGGGAGGC+AGG + chr1_1:51322333-51322352 None:intergenic 55.0%
CTGCCTCCCAATCACCATTC+AGG - chr1_1:51322331-51322350 Msa0027080:intron 55.0%
! AATGGACTCGTCTACGCCCA+AGG - chr1_1:51322421-51322440 Msa0027080:intron 55.0%
GTGTAGCAGCTTCTGGATCC+AGG + chr1_1:51322668-51322687 None:intergenic 55.0%
GAAGTCCTTAATCGGCGTGC+TGG - chr1_1:51322897-51322916 Msa0027080:intron 55.0%
GCACTAAATGTGGAGGGCGA+TGG - chr1_1:51324080-51324099 Msa0027080:intron 55.0%
CGCATGCACATGCCTAGACT+TGG + chr1_1:51324251-51324270 None:intergenic 55.0%
!! CCACACAAGCCGGTTTTGTG+AGG + chr1_1:51325479-51325498 None:intergenic 55.0%
!! CCTCACAAAACCGGCTTGTG+TGG - chr1_1:51325476-51325495 Msa0027080:CDS 55.0%
!! CAAAACCGGCTTGTGTGGTG+AGG - chr1_1:51325481-51325500 Msa0027080:CDS 55.0%
ATGTGCCTGTGCAATCCACG+GGG + chr1_1:51325720-51325739 None:intergenic 55.0%
CATGTGCCTGTGCAATCCAC+GGG + chr1_1:51325721-51325740 None:intergenic 55.0%
GCATGTGCCTGTGCAATCCA+CGG + chr1_1:51325722-51325741 None:intergenic 55.0%
! GTTTTGCAGCAACTGCGCTG+TGG - chr1_1:51327408-51327427 Msa0027080:intron 55.0%
! AGGGTGTCATGGAGGCAATC+AGG - chr1_1:51327545-51327564 Msa0027080:intron 55.0%
GCAATCAGGATAAGCTGCGC+TGG - chr1_1:51327559-51327578 Msa0027080:intron 55.0%
GCTTCTTGCACCCGAAGCTT+TGG - chr1_1:51327627-51327646 Msa0027080:intron 55.0%
!! CACCCGAAGCTTTGGATCGT+AGG - chr1_1:51327635-51327654 Msa0027080:intron 55.0%
GTGTATTGCAGAGCCACTGC+CGG - chr1_1:51328927-51328946 Msa0027080:intron 55.0%
TCCTCTCCATGCACATTGGG+TGG + chr1_1:51329002-51329021 None:intergenic 55.0%
! GACCTGCAGAGCTTTGGTAC+TGG + chr1_1:51329637-51329656 None:intergenic 55.0%
TTTGGCAGCTTGGAGAGCTC+CGG + chr1_1:51330121-51330140 None:intergenic 55.0%
CACAGATCAGGCTGCCAGTT+TGG + chr1_1:51330260-51330279 None:intergenic 55.0%
!! GAGAGTGCCTGTCATACAGG+AGG - chr1_1:51330596-51330615 Msa0027080:intron 55.0%
! CAATGGACTCCAGGTAGTGC+AGG + chr1_1:51330761-51330780 None:intergenic 55.0%
! CAAGGTCTGCAATGGACTCC+AGG + chr1_1:51330770-51330789 None:intergenic 55.0%
CTGGAGTCCATTGCAGACCT+TGG - chr1_1:51330768-51330787 Msa0027080:intron 55.0%
GAGCTCACCAAGGTCTGCAA+TGG + chr1_1:51330778-51330797 None:intergenic 55.0%
GAGACTGTTGCCGAAGAACC+TGG + chr1_1:51331121-51331140 None:intergenic 55.0%
CGGCAACAGGCTTTCCATGA+TGG + chr1_1:51331637-51331656 None:intergenic 55.0%
GCAGGAAGGTTGGCAGAAGA+AGG + chr1_1:51332681-51332700 None:intergenic 55.0%
CTTGCGTACAACCTCCAACG+GGG + chr1_1:51332703-51332722 None:intergenic 55.0%
CCTTGCGTACAACCTCCAAC+GGG + chr1_1:51332704-51332723 None:intergenic 55.0%
GCAACAGCTCACGGCTTATG+TGG - chr1_1:51332755-51332774 Msa0027080:intron 55.0%
CGAAGGCCATAGGATGCTTG+AGG - chr1_1:51333208-51333227 Msa0027080:intron 55.0%
GATACTCTGCCAGTGACCCA+TGG + chr1_1:51333532-51333551 None:intergenic 55.0%
!! GCTATGGTGCTGCCAAGCAA+AGG - chr1_1:51333955-51333974 Msa0027080:intron 55.0%
!! ATGGTGCTGCCAAGCAAAGG+AGG - chr1_1:51333958-51333977 Msa0027080:intron 55.0%
!! TTGGGTTGGCCTGGTGGTAT+TGG - chr1_1:51334023-51334042 Msa0027080:CDS 55.0%
!! TTGGCCTGGTGGTATTGGCT+TGG - chr1_1:51334028-51334047 Msa0027080:CDS 55.0%
!! TGGCCTGGTGGTATTGGCTT+GGG - chr1_1:51334029-51334048 Msa0027080:CDS 55.0%
GATCCCAAGCCAATACCACC+AGG + chr1_1:51334035-51334054 None:intergenic 55.0%
!! GGTGGTATTGGCTTGGGATC+TGG - chr1_1:51334035-51334054 Msa0027080:CDS 55.0%
TCGAACCTGAGACCTCAAGG+AGG + chr1_1:51334070-51334089 None:intergenic 55.0%
! CTCTCTGGTGCCAGTTTAGG+TGG - chr1_1:51334092-51334111 Msa0027080:intron 55.0%
CGTTGCTGGTCCTTGCATAG+TGG - chr1_1:51336535-51336554 Msa0027080:intron 55.0%
CATCAGAGCCACGCAATGCA+GGG + chr1_1:51336657-51336676 None:intergenic 55.0%
ACATCAGAGCCACGCAATGC+AGG + chr1_1:51336658-51336677 None:intergenic 55.0%
! TGTTGGTGCCCAGGTTTGGG+TGG - chr1_1:51320172-51320191 Msa0027080:three_prime_UTR 60.0%
AGAAGCCCCACCATGTGGAG+TGG - chr1_1:51320618-51320637 Msa0027080:intron 60.0%
GCTTTGTGCTGCACCTCCAG+AGG - chr1_1:51321700-51321719 Msa0027080:intron 60.0%
TGGTGATTGGGAGGCAGGAC+AGG + chr1_1:51322328-51322347 None:intergenic 60.0%
CGGCTCAGTGTAGCAGCTTC+TGG + chr1_1:51322675-51322694 None:intergenic 60.0%
GCACCCCTCACCTTACAAGC+TGG + chr1_1:51323036-51323055 None:intergenic 60.0%
CTCGCTGTGAGCTGCGCTTT+AGG - chr1_1:51328726-51328745 Msa0027080:intron 60.0%
GAGCCACTGCCGGAGATACT+TGG - chr1_1:51328937-51328956 Msa0027080:intron 60.0%
GTGCCAAGTATCTCCGGCAG+TGG + chr1_1:51328943-51328962 None:intergenic 60.0%
GCCACCCAATGTGCATGGAG+AGG - chr1_1:51328998-51329017 Msa0027080:intron 60.0%
GCAGACCTTGGTGAGCTCAC+TGG - chr1_1:51330780-51330799 Msa0027080:intron 60.0%
CCCGTTGGAGGTTGTACGCA+AGG - chr1_1:51332701-51332720 Msa0027080:intron 60.0%
GTGCTGCCAAGCAAAGGAGG+AGG - chr1_1:51333961-51333980 Msa0027080:intron 60.0%
!! TTAACCCGCTTGGGTTGGCC+TGG - chr1_1:51334014-51334033 Msa0027080:CDS 60.0%
TACCACCAGGCCAACCCAAG+CGG + chr1_1:51334022-51334041 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTTG+AGG - chr1_1:51334055-51334074 Msa0027080:CDS 60.0%
GTGCTCCTCCTTGAGGTCTC+AGG - chr1_1:51334062-51334081 Msa0027080:CDS 60.0%
AGCACGACGCAATGCCACGT+GGG + chr1_1:51334513-51334532 None:intergenic 60.0%
AAGCACGACGCAATGCCACG+TGG + chr1_1:51334514-51334533 None:intergenic 60.0%
CCACGCAATGCAGGGACACA+GGG + chr1_1:51336649-51336668 None:intergenic 60.0%
TGGTGCCCAGGTTTGGGTGG+AGG - chr1_1:51320175-51320194 Msa0027080:three_prime_UTR 65.0%
TGGGTGAGAGACGGGGGACA+TGG - chr1_1:51324548-51324567 Msa0027080:intron 65.0%
TGCCAACCTTCCTGCCCCGT+TGG - chr1_1:51332686-51332705 Msa0027080:intron 65.0%
CTCCAACGGGGCAGGAAGGT+TGG + chr1_1:51332691-51332710 None:intergenic 65.0%
CAACCTTCCTGCCCCGTTGG+AGG - chr1_1:51332689-51332708 Msa0027080:intron 65.0%
CAACCTCCAACGGGGCAGGA+AGG + chr1_1:51332695-51332714 None:intergenic 65.0%
CGTACAACCTCCAACGGGGC+AGG + chr1_1:51332699-51332718 None:intergenic 65.0%
ACCACCAGGCCAACCCAAGC+GGG + chr1_1:51334021-51334040 None:intergenic 65.0%
CCCTGTGTCCCTGCATTGCG+TGG - chr1_1:51336646-51336665 Msa0027080:intron 65.0%
GCCACGCAATGCAGGGACAC+AGG + chr1_1:51336650-51336669 None:intergenic 65.0%
!! ACCCGCTTGGGTTGGCCTGG+TGG - chr1_1:51334017-51334036 Msa0027080:CDS 70.0%
TACGCGCTCCCCGCCTCACA+AGG + chr1_1:51334753-51334772 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51319986 51336955 51319986 ID=Msa0027080;Name=Msa0027080
chr1_1 mRNA 51319986 51336955 51319986 ID=Msa0027080-mRNA-1;Parent=Msa0027080;Name=Msa0027080-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.97|0.97|0.97|1|1|39|481|1541
chr1_1 exon 51319986 51320581 51319986 ID=Msa0027080-mRNA-1:exon:14989;Parent=Msa0027080-mRNA-1
chr1_1 exon 51320915 51320997 51320915 ID=Msa0027080-mRNA-1:exon:14988;Parent=Msa0027080-mRNA-1
chr1_1 exon 51321076 51321156 51321076 ID=Msa0027080-mRNA-1:exon:14987;Parent=Msa0027080-mRNA-1
chr1_1 exon 51321609 51321665 51321609 ID=Msa0027080-mRNA-1:exon:14986;Parent=Msa0027080-mRNA-1
chr1_1 exon 51322609 51322665 51322609 ID=Msa0027080-mRNA-1:exon:14985;Parent=Msa0027080-mRNA-1
chr1_1 exon 51322959 51323058 51322959 ID=Msa0027080-mRNA-1:exon:14984;Parent=Msa0027080-mRNA-1
chr1_1 exon 51323159 51323229 51323159 ID=Msa0027080-mRNA-1:exon:14983;Parent=Msa0027080-mRNA-1
chr1_1 exon 51323345 51323470 51323345 ID=Msa0027080-mRNA-1:exon:14982;Parent=Msa0027080-mRNA-1
chr1_1 exon 51324093 51324278 51324093 ID=Msa0027080-mRNA-1:exon:14981;Parent=Msa0027080-mRNA-1
chr1_1 exon 51324355 51324510 51324355 ID=Msa0027080-mRNA-1:exon:14980;Parent=Msa0027080-mRNA-1
chr1_1 exon 51325184 51325354 51325184 ID=Msa0027080-mRNA-1:exon:14979;Parent=Msa0027080-mRNA-1
chr1_1 exon 51325438 51325521 51325438 ID=Msa0027080-mRNA-1:exon:14978;Parent=Msa0027080-mRNA-1
chr1_1 exon 51325616 51325660 51325616 ID=Msa0027080-mRNA-1:exon:14977;Parent=Msa0027080-mRNA-1
chr1_1 exon 51325745 51325859 51325745 ID=Msa0027080-mRNA-1:exon:14976;Parent=Msa0027080-mRNA-1
chr1_1 exon 51326018 51326157 51326018 ID=Msa0027080-mRNA-1:exon:14975;Parent=Msa0027080-mRNA-1
chr1_1 exon 51326264 51326476 51326264 ID=Msa0027080-mRNA-1:exon:14974;Parent=Msa0027080-mRNA-1
chr1_1 exon 51326738 51326836 51326738 ID=Msa0027080-mRNA-1:exon:14973;Parent=Msa0027080-mRNA-1
chr1_1 exon 51327884 51328003 51327884 ID=Msa0027080-mRNA-1:exon:14972;Parent=Msa0027080-mRNA-1
chr1_1 exon 51328163 51328368 51328163 ID=Msa0027080-mRNA-1:exon:14971;Parent=Msa0027080-mRNA-1
chr1_1 exon 51328467 51328644 51328467 ID=Msa0027080-mRNA-1:exon:14970;Parent=Msa0027080-mRNA-1
chr1_1 exon 51329139 51329199 51329139 ID=Msa0027080-mRNA-1:exon:14969;Parent=Msa0027080-mRNA-1
chr1_1 exon 51329285 51329394 51329285 ID=Msa0027080-mRNA-1:exon:14968;Parent=Msa0027080-mRNA-1
chr1_1 exon 51329510 51329641 51329510 ID=Msa0027080-mRNA-1:exon:14967;Parent=Msa0027080-mRNA-1
chr1_1 exon 51329734 51329904 51329734 ID=Msa0027080-mRNA-1:exon:14966;Parent=Msa0027080-mRNA-1
chr1_1 exon 51330072 51330198 51330072 ID=Msa0027080-mRNA-1:exon:14965;Parent=Msa0027080-mRNA-1
chr1_1 exon 51330352 51330389 51330352 ID=Msa0027080-mRNA-1:exon:14964;Parent=Msa0027080-mRNA-1
chr1_1 exon 51332948 51333049 51332948 ID=Msa0027080-mRNA-1:exon:14963;Parent=Msa0027080-mRNA-1
chr1_1 exon 51333420 51333477 51333420 ID=Msa0027080-mRNA-1:exon:14962;Parent=Msa0027080-mRNA-1
chr1_1 exon 51333988 51334089 51333988 ID=Msa0027080-mRNA-1:exon:14961;Parent=Msa0027080-mRNA-1
chr1_1 exon 51334205 51334351 51334205 ID=Msa0027080-mRNA-1:exon:14960;Parent=Msa0027080-mRNA-1
chr1_1 exon 51334452 51334588 51334452 ID=Msa0027080-mRNA-1:exon:14959;Parent=Msa0027080-mRNA-1
chr1_1 exon 51334693 51334842 51334693 ID=Msa0027080-mRNA-1:exon:14958;Parent=Msa0027080-mRNA-1
chr1_1 exon 51335220 51335379 51335220 ID=Msa0027080-mRNA-1:exon:14957;Parent=Msa0027080-mRNA-1
chr1_1 exon 51335486 51335544 51335486 ID=Msa0027080-mRNA-1:exon:14956;Parent=Msa0027080-mRNA-1
chr1_1 exon 51335708 51335867 51335708 ID=Msa0027080-mRNA-1:exon:14955;Parent=Msa0027080-mRNA-1
chr1_1 exon 51335970 51336115 51335970 ID=Msa0027080-mRNA-1:exon:14954;Parent=Msa0027080-mRNA-1
chr1_1 exon 51336218 51336361 51336218 ID=Msa0027080-mRNA-1:exon:14953;Parent=Msa0027080-mRNA-1
chr1_1 exon 51336661 51336789 51336661 ID=Msa0027080-mRNA-1:exon:14952;Parent=Msa0027080-mRNA-1
chr1_1 exon 51336866 51336955 51336866 ID=Msa0027080-mRNA-1:exon:14951;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51336866 51336955 51336866 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51336661 51336789 51336661 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51336218 51336361 51336218 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51335970 51336115 51335970 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51335708 51335867 51335708 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51335486 51335544 51335486 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51335220 51335379 51335220 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51334693 51334842 51334693 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51334452 51334588 51334452 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51334205 51334351 51334205 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51333988 51334089 51333988 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51333420 51333477 51333420 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51332948 51333049 51332948 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51330352 51330389 51330352 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51330072 51330198 51330072 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51329734 51329904 51329734 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51329510 51329641 51329510 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51329285 51329394 51329285 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51329139 51329199 51329139 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51328467 51328644 51328467 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51328163 51328368 51328163 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51327884 51328003 51327884 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51326738 51326836 51326738 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51326264 51326476 51326264 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51326018 51326157 51326018 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51325745 51325859 51325745 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51325616 51325660 51325616 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51325438 51325521 51325438 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51325184 51325354 51325184 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51324355 51324510 51324355 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51324093 51324278 51324093 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51323345 51323470 51323345 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51323159 51323229 51323159 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51322959 51323058 51322959 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51322609 51322665 51322609 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51321609 51321665 51321609 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51321076 51321156 51321076 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51320915 51320997 51320915 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 CDS 51320467 51320581 51320467 ID=Msa0027080-mRNA-1:cds;Parent=Msa0027080-mRNA-1
chr1_1 three_prime_UTR 51319986 51320466 51319986 ID=Msa0027080-mRNA-1:three_prime_utr;Parent=Msa0027080-mRNA-1
Gene Sequence

>Msa0027080

ATGAAATTTGTGGGATTTATTGCGTACAACCTGAGACAATCTTTTAGGTTATTTAGAGTCATTTCTGCTACAGACACCAAGCAGATGTTGGCCACTGCTGCCACTCCTATTGTTGGTGCCCAGGTTTGGGTGGAGGATTCTGATGTAGCTTGGATAGATGGCGAGGTCTTGGAGGTTAATGGGGAAGACATAAAAGTCCTTTGTACTTCAGGAAAAACGGTTACTGTTAAAGCTTCCAGTGTTTATCATAAAGATACAGAAGCCCCACCATGTGGAGTGGATGATATGACAAAGCTTGCTTACCTGCATGAACCTGGTGTCCTAGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACGGGGAATATATTGATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCGCAATATAAAGGAGCAGGCTTTGGTGAGCTAAGCCCACATCCTTTTGCTATTGCTGACGCAGCATATAGGCTTATGATCAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGTAAAACAGAAAGCACAAAGTTACTTATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATGCTGCTGAAGGTAGAACTGTCGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGAAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAAGGGAAGAATTTCTGGAGCTGCTATCAGAACTTACCTGCTGGAAAGATCACGTGTTTGCCAGTTGTCGGATCCTGAAAGGAATTATCACTGTTTCTATATGCTTTGTGCTGCACCTCCAGAGGTTGTTCAGAAATACAAATTAGGAAACCCAAGAACATTTCATTATCTAAATCAAACAAATTGCTATGAGTTGGATGGAGTTGACGAGTTTAAAGAATATTGTGATACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTTTGAAGAGCAGGAAGCTATATTTCAAGTGGTTGCTGCAATTTTACATCTTGGAAACATTGAATTTTCAAAAGGAAAGGAAATGGACTCGTCTACGCCCAAGGATGAAAAATCTCGGTTTCATCTACAGACTGCCGCCGAACTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATTGTTAAATGCCTGGATCCAGAAGCTGCTACACTGAGCCGAGACGCTTTAGCTAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTAGATAAAATTAACAATTCAATTGGTCAAGATCCTGACTCGAAGTCCTTAATCGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTCTGTATTAATTTGACCAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAGAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGAGGCATTATTGCTCTTCTCGATGAAGCTTGTATGTTTCCTAGATCAACAAATGAAACTTTCGCGCAAAAGTTGTATCAGACGTTCAAGAACCATAAAAGGTTCAGCAAGCCCAAATTGTCACGCAGTGACTTCACAATTGGCCATTATGCTGGCGATGTCACTTATCAAACTGATTTATTCCTGGACAAGAACAAAGATTATGTTGTTGCCGAACATCAAGCACTTCTGTATGCTTCCAAATGCCCCTTTGTATCGGGTTTATTTGTCCCCTCACCCGAGGAATCATCTAATAAATCAAAGTTTTCTTCAATAGGTTCCCGGTTTAAGCAACAATTACAAGCACTACTTGAAATTCTTAGTTCTACTGAGCCACACTACATTCGTTGTGTTAAACCCAATAATCTTCTCAAGCCAGCAATTTTTGAGCACAAAAATGTTTTGCAGCAACTGCGCTGTGGAGGTGTCATGGAGGCAATCAGGATAAGCTGCGCTGGGTATCCCACCAGAAAAACGTTTGATGAATTTGTGGATCGATTTGGGCTTCTTGCACCCGAAGCTTTGGATCGTAGTTCTGATGAGGTTACCGCTTGCAAGCGGATTTTGGAGAAGGTTGGACTTAAAGGATATCAGATTGGTAAAACCAAAGTGTTTCTTAGAGCTGGTCAAATGGCAGAACTAGATACTTGTAGAAGTGAGATATTAGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGCTCCTATTTGGCCCGCCGAAGTTTTGTCTCGATTCGCTTATCTGCTATACAGTTACAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTATATGAGGGATTGCGGCAAGAGGCTTCTAGTCTGATCATTCAGAGGTGTTTCCGCATGCATATTGCTAGGAAGGCATATAAAGAATTGTACAGCTCGGCTATTTCTATTCAAACTGGTATGCGAGGGATGGCTGCTCGCTGTGAGCTGCGCTTTAGGAAGCAGACCAGTGCAGCTATTATCATTCAGAGCCACTGCCGGAGATACTTGGCACACCATCATTTTATGAACTTAAAGAAGGCAGCAATTGCCACCCAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAACTAAAAAATCTCAAGATGGCTGCAAGAGAAACCGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGCTGCAGCTTGAAAAACGCATTAGGGTTGACATGGAAGAAGCAAAAAGACAAGAGAATGAAAAATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACTAAGTCATTGCTTCAAAAGGAGCGTGAGGCCTCAAAAAGAGAAGCAGAGAGAGTGCCTGTCATACAGGAGGTTCCTGTTGTTGATCATGGTTTGATGGAGAAGCTAACTAGTGAAAATGAGAAACTCAAGACCTTGGTGAGCTCACTGGAAATGAAAATTGACGAAACAGAGAAAAGGTATGAAGAGGCTAATAAAATCAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAGTCGAAAATAATCCAGTTGAAAACTTCTATGCAAAGGCTTGAAGATAAATTCTTAGATATGGAAACCGAAAACCAGGTTCTTCGGCAACAGTCTCTGCTTAACTCATCTGTGAAACCAATGTCAGAGCACCTTTCAACCCATGTATATGAGAAGTTGGAAAATGGTCACCATATGGTAGAAGATCAGAAAGCTGCTGAAACACAAAGTGTCACACCTTTGAAAAAGTTTGGTACAGAATCTGATAGCAAATTAAGGAGATCCTACATTGAACGTCAACATGAAAATGTTGATGCCCTTATCAATTGTGTTATGAAAAATATTGGATTCCATCATGGAAAGCCTGTTGCCGCGTTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCGGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCGGCAATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATACGTCTGCACTATTGTTTCTGCTTCAACAAAGTTTAAAATCTGGTGGTTCGACTGATTCAACCCCAGTTAGAAAACCACCAAATCCGACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGATCATCTCCTTCTTCTGCCAACCTTCCTGCCCCGTTGGAGGTTGTACGCAAGGTAGATGCTAAGTATCCTGCTTTGCTTTTCAAGCAACAGCTCACGGCTTATGTGGAGAAAATATATGGCATCTTGCGGGACAACTTGAAGAAAGAGTTGCAATCATTTATTTCATTATGTATCCAGGCCCCAAGAACATCAAAAGGAGTCTTAAGATCTGGTCGATCTTTTAGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATCATTGAATCCCTCAACACCCTTCTCTGCACTATGAAAGAGAACTTTGTGCCTCCTGTCCTTATCCAAAAGATCTTCTCTCAAACGTTTTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGGCGTGATTGTTGCACATTCAGCAACGGAGAATATGTTAAGGCTGGTTTAGCAGAATTGGAGCTATGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGGACATCTTGGGATGAGCTCAAACACATAAGACAGGCAGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATCAATGATTTATGCCCCATCATGAGTGTTCAGCAGCTGTACAGAGTATGCACACTTTACTGGGATGCTAACTACAACACTCGAAGCGTATCTCCAGATGTCCTTTCAAGCATGAAGGTACTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGACGATACTTCCAGCATCCCATTCTCAGTTGATGACCTCTCTACCTCACTGCAAGAGAGAGATTTTTCTGAGATGAAACCAGCAGATGAGCTTCTCGAGAATCCCGCCTTCCAATTTTTGAATGAGTAG
Protein sequence

>Msa0027080

MKFVGFIAYNLRQSFRLFRVISATDTKQMLATAATPIVGAQVWVEDSDVAWIDGEVLEVNGEDIKVLCTSGKTVTVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAIADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEVVQKYKLGNPRTFHYLNQTNCYELDGVDEFKEYCDTRRAMDVVGISFEEQEAIFQVVAAILHLGNIEFSKGKEMDSSTPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETIVKCLDPEAATLSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTNETFAQKLYQTFKNHKRFSKPKLSRSDFTIGHYAGDVTYQTDLFLDKNKDYVVAEHQALLYASKCPFVSGLFVPSPEESSNKSKFSSIGSRFKQQLQALLEILSSTEPHYIRCVKPNNLLKPAIFEHKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDRSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMAELDTCRSEILGKSASIIQRKVRSYLARRSFVSIRLSAIQLQAACRGQLARQVYEGLRQEASSLIIQRCFRMHIARKAYKELYSSAISIQTGMRGMAARCELRFRKQTSAAIIIQSHCRRYLAHHHFMNLKKAAIATQCAWRGKVARRELKNLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRIRVDMEEAKRQENEKLQSALQEMQLQFKETKSLLQKEREASKREAERVPVIQEVPVVDHGLMEKLTSENEKLKTLVSSLEMKIDETEKRYEEANKISEERLKQALDAESKIIQLKTSMQRLEDKFLDMETENQVLRQQSLLNSSVKPMSEHLSTHVYEKLENGHHMVEDQKAAETQSVTPLKKFGTESDSKLRRSYIERQHENVDALINCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLFLLQQSLKSGGSTDSTPVRKPPNPTSLFGRMTMGFRSSPSSANLPAPLEVVRKVDAKYPALLFKQQLTAYVEKIYGILRDNLKKELQSFISLCIQAPRTSKGVLRSGRSFSKDSPMGHWQSIIESLNTLLCTMKENFVPPVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGTSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRVCTLYWDANYNTRSVSPDVLSSMKVLMAEDSNNAQSDSFLLDDTSSIPFSVDDLSTSLQERDFSEMKPADELLENPAFQFLNE*