AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0027470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027470 MtrunA17_Chr1g0183721 97.315 596 16 0 1 596 1 596 0.0 1212
Msa0027470 MtrunA17_Chr1g0167381 69.071 624 159 5 1 592 1 622 0.0 916
Msa0027470 MtrunA17_Chr1g0187601 69.489 626 158 4 1 595 1 624 0.0 903
Msa0027470 MtrunA17_Chr1g0159741 48.611 504 237 11 64 557 143 634 6.75e-165 485
Msa0027470 MtrunA17_Chr3g0112341 48.828 512 239 10 64 566 155 652 1.05e-163 483
Msa0027470 MtrunA17_Chr5g0435751 45.331 514 242 7 60 566 123 604 4.99e-159 469
Msa0027470 MtrunA17_Chr1g0171781 46.011 539 268 8 56 585 79 603 3.29e-158 466
Msa0027470 MtrunA17_Chr7g0246701 44.199 543 272 11 63 589 102 629 3.71e-158 467
Msa0027470 MtrunA17_Chr8g0350391 42.385 545 274 10 62 585 105 630 1.60e-155 460
Msa0027470 MtrunA17_Chr3g0130381 46.816 534 250 14 71 590 268 781 7.23e-152 456
Msa0027470 MtrunA17_Chr3g0125511 45.996 537 251 15 70 589 232 746 2.83e-151 453
Msa0027470 MtrunA17_Chr5g0437501 46.443 506 248 9 71 564 101 595 7.72e-150 445
Msa0027470 MtrunA17_Chr8g0388881 42.726 543 276 13 60 585 96 620 1.93e-149 444
Msa0027470 MtrunA17_Chr8g0361791 42.910 536 273 10 65 587 87 602 1.29e-148 442
Msa0027470 MtrunA17_Chr8g0384431 46.289 512 238 13 71 563 298 791 5.66e-147 444
Msa0027470 MtrunA17_Chr5g0416991 40.064 629 307 16 1 587 1 601 7.48e-147 437
Msa0027470 MtrunA17_Chr8g0350351 41.573 534 285 8 60 585 86 600 2.00e-146 436
Msa0027470 MtrunA17_Chr1g0203741 41.728 544 281 13 61 585 91 617 2.34e-145 434
Msa0027470 MtrunA17_Chr6g0472571 41.912 544 282 11 63 590 106 631 3.06e-145 434
Msa0027470 MtrunA17_Chr7g0246681 40.824 534 289 9 60 585 73 587 8.35e-144 429
Msa0027470 MtrunA17_Chr8g0372471 45.580 509 253 10 70 568 386 880 9.72e-144 438
Msa0027470 MtrunA17_Chr7g0214551 42.589 533 279 12 65 581 46 567 1.09e-143 428
Msa0027470 MtrunA17_Chr4g0055031 40.255 549 294 11 60 594 84 612 1.89e-143 429
Msa0027470 MtrunA17_Chr8g0369481 41.744 539 285 9 62 588 70 591 1.18e-142 426
Msa0027470 MtrunA17_Chr3g0113981 43.888 499 260 9 71 564 175 658 9.31e-141 424
Msa0027470 MtrunA17_Chr5g0409411 40.301 598 326 11 9 590 13 595 1.83e-139 418
Msa0027470 MtrunA17_Chr3g0092501 40.246 569 299 16 38 590 59 602 1.01e-134 406
Msa0027470 MtrunA17_Chr5g0426281 34.043 611 352 13 8 582 72 667 7.27e-113 352
Msa0027470 MtrunA17_Chr3g0115931 34.572 619 348 15 8 582 80 685 3.15e-110 345
Msa0027470 MtrunA17_Chr1g0155141 37.476 531 291 13 64 585 201 699 1.60e-107 338
Msa0027470 MtrunA17_Chr5g0404771 48.399 281 128 6 46 324 303 568 1.12e-78 259
Msa0027470 MtrunA17_Chr5g0404761 39.236 288 145 10 312 585 1 272 4.00e-57 193
Msa0027470 MtrunA17_Chr4g0043121 29.971 347 227 6 25 364 52 389 3.16e-56 196
Msa0027470 MtrunA17_Chr4g0043131 42.162 185 85 3 415 582 1 180 9.97e-39 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0027470 AT3G23300.2 72.995 611 140 6 3 592 2 608 0.0 935
Msa0027470 AT3G23300.1 72.995 611 140 6 3 592 2 608 0.0 935
Msa0027470 AT4G14360.1 73.563 609 143 4 3 595 2 608 0.0 918
Msa0027470 AT4G14360.2 73.563 609 143 4 3 595 2 608 0.0 918
Msa0027470 AT1G04430.1 70.240 625 154 6 1 595 1 623 0.0 914
Msa0027470 AT1G04430.3 70.240 625 154 6 1 595 1 623 0.0 914
Msa0027470 AT1G04430.2 70.240 625 154 6 1 595 1 623 0.0 914
Msa0027470 AT5G14430.1 63.790 591 196 5 13 585 14 604 0.0 755
Msa0027470 AT5G14430.2 63.283 591 199 5 13 585 14 604 0.0 749
Msa0027470 AT5G06050.1 47.407 540 252 11 57 584 144 663 2.19e-171 503
Msa0027470 AT1G77260.1 47.148 526 252 10 62 580 143 649 6.97e-168 493
Msa0027470 AT2G39750.1 48.728 511 241 8 64 566 179 676 9.71e-168 494
Msa0027470 AT3G10200.1 44.944 534 280 8 56 585 65 588 4.12e-158 466
Msa0027470 AT5G04060.1 43.820 534 284 7 56 585 76 597 1.46e-156 462
Msa0027470 AT2G45750.1 43.382 544 275 10 61 585 86 615 1.40e-153 456
Msa0027470 AT2G34300.2 46.369 537 253 14 71 592 250 766 5.45e-153 459
Msa0027470 AT2G34300.3 46.369 537 253 14 71 592 250 766 5.45e-153 459
Msa0027470 AT2G34300.1 46.369 537 253 14 71 592 250 766 5.45e-153 459
Msa0027470 AT3G51070.1 47.664 535 236 15 70 585 380 889 2.10e-152 461
Msa0027470 AT1G33170.1 43.566 544 272 12 65 590 113 639 5.08e-152 452
Msa0027470 AT1G29470.1 46.241 532 255 12 71 590 250 762 5.51e-151 454
Msa0027470 AT1G29470.2 46.241 532 255 12 71 590 250 762 5.51e-151 454
Msa0027470 AT5G64030.1 45.506 534 255 13 71 589 308 820 1.54e-150 454
Msa0027470 AT4G10440.1 42.435 542 280 12 65 590 96 621 1.79e-150 447
Msa0027470 AT4G00740.1 43.715 533 271 9 62 585 81 593 1.78e-147 439
Msa0027470 AT4G00740.2 43.715 533 271 9 62 585 81 593 1.78e-147 439
Msa0027470 AT4G00750.1 42.541 543 277 12 62 585 96 622 3.03e-147 439
Msa0027470 AT4G19120.1 40.604 596 317 13 14 590 18 595 5.23e-146 435
Msa0027470 AT4G19120.2 40.604 596 317 13 14 590 18 595 5.23e-146 435
Msa0027470 AT3G10200.2 46.058 482 248 7 56 533 65 538 5.47e-146 435
Msa0027470 AT1G26850.2 40.203 592 314 13 22 590 39 613 7.70e-146 435
Msa0027470 AT1G26850.1 40.203 592 314 13 22 590 39 613 7.70e-146 435
Msa0027470 AT2G43200.2 42.357 543 270 16 62 584 91 610 1.59e-140 421
Msa0027470 AT2G43200.1 42.357 543 270 16 62 584 91 610 1.59e-140 421
Msa0027470 AT2G40280.1 45.363 496 245 14 71 559 90 566 5.17e-139 417
Msa0027470 AT3G51070.2 50.108 465 196 13 70 515 380 827 2.10e-138 423
Msa0027470 AT1G31850.1 36.971 614 346 13 1 588 1 599 1.02e-137 414
Msa0027470 AT1G31850.2 36.971 614 346 13 1 588 1 599 1.02e-137 414
Msa0027470 AT1G31850.4 36.971 614 346 13 1 588 1 599 1.02e-137 414
Msa0027470 AT1G31850.3 36.971 614 346 13 1 588 1 599 1.02e-137 414
Msa0027470 AT3G56080.1 44.064 497 253 11 71 559 114 593 6.65e-137 412
Msa0027470 AT4G18030.1 36.508 630 333 15 2 589 3 607 1.50e-130 396
Msa0027470 AT3G56080.2 45.796 452 223 10 71 515 114 550 4.57e-127 385
Msa0027470 AT4G19120.3 40.404 495 263 11 14 489 18 499 1.70e-116 356
Msa0027470 AT1G26850.3 39.316 468 249 10 22 467 39 493 1.78e-106 330
Msa0027470 AT1G19430.1 37.476 531 292 14 64 585 223 722 6.86e-106 335
Msa0027470 AT1G19430.3 37.476 531 292 14 64 585 223 722 6.86e-106 335
Msa0027470 AT1G78240.1 34.426 549 318 14 60 582 144 676 6.26e-105 332
Msa0027470 AT1G78240.2 34.426 549 318 14 60 582 144 676 6.26e-105 332
Msa0027470 AT1G13860.4 33.273 556 306 10 60 584 79 600 6.64e-102 321
Msa0027470 AT1G13860.3 33.273 556 306 10 60 584 79 600 6.64e-102 321
Msa0027470 AT1G13860.1 33.273 556 306 10 60 584 79 600 6.64e-102 321
Msa0027470 AT1G13860.5 33.273 556 306 10 60 584 79 600 6.64e-102 321
Msa0027470 AT2G03480.2 33.821 547 298 10 60 582 84 590 2.13e-98 312
Msa0027470 AT2G03480.1 33.273 550 308 10 60 582 84 601 1.24e-94 302
Msa0027470 AT1G13860.2 35.205 463 253 8 150 584 1 444 2.85e-89 283
Msa0027470 AT1G19430.2 35.013 397 225 12 64 451 223 595 2.98e-62 216
Msa0027470 AT2G03480.3 32.509 283 180 3 60 335 84 362 5.94e-53 187

Find 174 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATTGTTTATAATATTATT+TGG 0.139749 1_1:+51774268 None:intergenic
GATGGACATGAAGGCAAATT+TGG 0.152140 1_1:-51773145 Msa0027470:CDS
CCGGCATATCTTGGTGTTCT+AGG 0.184593 1_1:-51774100 Msa0027470:CDS
CCATACCTGATCTCTGCTTT+TGG 0.205429 1_1:+51774556 None:intergenic
TGTAAGGGAGGTATTGAATT+TGG 0.232566 1_1:+51776162 None:intergenic
TCTCTAAAGCAAACTGGATT+TGG 0.272128 1_1:+51774131 None:intergenic
CGAATAATTACGAAACCTTT+TGG 0.279658 1_1:+51772497 None:intergenic
CGAAATTGATTTGAAGTTAG+TGG 0.281979 1_1:-51772007 Msa0027470:three_prime_UTR
CCTGAATCTTGCTCCACATT+AGG 0.291132 1_1:+51772404 None:intergenic
TTAACTCCCCAAACAGTATC+AGG 0.293289 1_1:+51773740 None:intergenic
TATGACAGTCTGGTTCTTCT+TGG 0.314236 1_1:+51773844 None:intergenic
CCTAATGTGGAGCAAGATTC+AGG 0.314315 1_1:-51772404 Msa0027470:CDS
ATGAAGAGGACCGGAGAATA+TGG 0.318271 1_1:-51773913 Msa0027470:CDS
GTTGTGATCAACCGCTTTCT+TGG 0.319951 1_1:+51775311 None:intergenic
GGTATTGTATTGTATTGTAT+TGG 0.320855 1_1:+51776276 None:intergenic
GATCAGTTGTGTTGTCTATA+AGG 0.329182 1_1:-51772466 Msa0027470:CDS
CTTTGAAGGACAAAGATGTT+TGG 0.331479 1_1:-51773107 Msa0027470:CDS
GGCTGTGGCGTTGCAAGCTT+TGG 0.331598 1_1:-51774217 Msa0027470:CDS
AATCAAGCTTCAATCTTGTT+TGG 0.335022 1_1:+51774795 None:intergenic
TGCTTTAGAGAGAGGAATTC+CGG 0.335406 1_1:-51774119 Msa0027470:CDS
AGAAGAGGAACAACATAAAA+AGG 0.339308 1_1:+51772183 None:intergenic
TTATCTTCTATTGAGTATAC+TGG 0.346874 1_1:-51775227 Msa0027470:CDS
TGATGATCCTGATACTGTTT+GGG 0.360046 1_1:-51773747 Msa0027470:CDS
GTATTGTATTGTATTGTATT+GGG 0.362994 1_1:+51776277 None:intergenic
CAGAACTGGATGGTAGTAAA+AGG 0.366337 1_1:-51774488 Msa0027470:CDS
TAAGTTGAGGGCTTCTTGTT+GGG 0.370472 1_1:-51775489 Msa0027470:five_prime_UTR
AACGGAGAGTTAGTTATTAC+TGG 0.376365 1_1:-51773212 Msa0027470:CDS
GAAGCTTGATTTGACTTTGA+TGG 0.377646 1_1:-51774783 Msa0027470:CDS
TGTATGCAGTTCTTGCTTTG+TGG 0.380548 1_1:-51775555 Msa0027470:intron
CTGAGAAATCTGACCAGAAC+TGG 0.381079 1_1:-51774502 Msa0027470:CDS
TTTGAAGGACAAAGATGTTT+GGG 0.382594 1_1:-51773106 Msa0027470:CDS
GTTCCTCTTCTCTACGCTAC+AGG 0.383315 1_1:-51772171 Msa0027470:three_prime_UTR
CGGCATACTTCTTCTTGAAC+TGG 0.386980 1_1:-51773996 Msa0027470:CDS
CACACCTTGTTATTGTGATT+AGG 0.387550 1_1:-51772090 Msa0027470:three_prime_UTR
TCATCCTGAGCATAAGCTTC+AGG 0.388078 1_1:+51773932 None:intergenic
ATGATGATCCTGATACTGTT+TGG 0.389952 1_1:-51773748 Msa0027470:CDS
AAGTAACAATCATTTGTTAG+AGG 0.390015 1_1:+51773812 None:intergenic
ATTGTATTGGGATTGGGATA+TGG 0.392177 1_1:+51776289 None:intergenic
GGCTGACAACCGAGAGCATC+CGG 0.395794 1_1:-51772337 Msa0027470:CDS
TATATGATCTTGAGTGTGTT+AGG 0.396759 1_1:+51773057 None:intergenic
ATGGACATGAAGGCAAATTT+GGG 0.396994 1_1:-51773144 Msa0027470:CDS
GTTTAGTTTACCTGTATTCT+CGG 0.399278 1_1:-51775262 Msa0027470:CDS
TTAAGTTGAGGGCTTCTTGT+TGG 0.405460 1_1:-51775490 Msa0027470:five_prime_UTR
TTCCTCTCTCTAAAGCAAAC+TGG 0.405583 1_1:+51774125 None:intergenic
TTGTGATCAACCGCTTTCTT+GGG 0.407230 1_1:+51775312 None:intergenic
ATCACGTTCCGAACCGTGTC+AGG 0.408599 1_1:+51773165 None:intergenic
AATAAGATCAGATGATGAAA+AGG 0.413796 1_1:+51776350 None:intergenic
GTTAAGACTTTGCCCATTGT+TGG 0.420819 1_1:+51772293 None:intergenic
ATAAGATCAGATGATGAAAA+GGG 0.424109 1_1:+51776351 None:intergenic
TATTGTATTGTATTGGGATT+GGG 0.425040 1_1:+51776283 None:intergenic
TACCTGTATTCTCGGAATAG+TGG 0.426262 1_1:-51775254 Msa0027470:CDS
AGTTCTTGCCAGCATTGCAC+TGG 0.432352 1_1:-51772442 Msa0027470:CDS
TTATAACGCCTCTCGGGCAT+TGG 0.432605 1_1:+51774740 None:intergenic
CATATATGACAGAGGGCTGT+TGG 0.434744 1_1:-51773040 Msa0027470:CDS
AAATAAAACCTGACACGGTT+CGG 0.438507 1_1:-51773173 Msa0027470:CDS
ACCTTGTTAGAAAGAGTGTA+AGG 0.445651 1_1:+51776146 None:intergenic
AGAGGAATTCCGGCATATCT+TGG 0.451720 1_1:-51774109 Msa0027470:CDS
AACTTGAATCATTAAGTTGA+GGG 0.453925 1_1:-51775501 Msa0027470:five_prime_UTR
ATGAATGTAGTGCCTGAAAA+CGG 0.455508 1_1:-51773081 Msa0027470:CDS
GCAAGTTCAAAAGATCTACT+AGG 0.457604 1_1:+51774058 None:intergenic
CGGCATATCTTGGTGTTCTA+GGG 0.462006 1_1:-51774099 Msa0027470:CDS
TTCTAATGAAATGTTTGTAA+AGG 0.467890 1_1:-51773352 Msa0027470:CDS
TGAATGTAGTGCCTGAAAAC+GGG 0.471762 1_1:-51773080 Msa0027470:CDS
TTCTGAAACCCGGATGCTCT+CGG 0.472956 1_1:+51772328 None:intergenic
CCAAATAATATTATAAACAA+TGG 0.474558 1_1:-51774268 Msa0027470:CDS
AGAGAAATGAGTGCTCTTGT+AGG 0.475258 1_1:-51773890 Msa0027470:CDS
GAGGAAGTGATTTGTCTCCT+TGG 0.483143 1_1:-51773422 Msa0027470:CDS
TGTATCACCTAGGCGATTTG+TGG 0.487377 1_1:-51775524 Msa0027470:five_prime_UTR
GTATTGTATTGTATTGGGAT+TGG 0.488653 1_1:+51776282 None:intergenic
ACAGGATTTATTGATTGAGA+TGG 0.488943 1_1:-51772534 Msa0027470:CDS
AGAAGAACCAGACTGTCATA+TGG 0.491000 1_1:-51773841 Msa0027470:CDS
CAGAGTGGAGGTTGTGTACC+GGG 0.492619 1_1:+51773779 None:intergenic
AAATGACATACTCCAACAAT+GGG 0.496674 1_1:-51772305 Msa0027470:exon
ATATATGACAGAGGGCTGTT+GGG 0.496859 1_1:-51773039 Msa0027470:CDS
TATGAGATTTCTGTCTAGAC+AGG 0.499113 1_1:+51774820 None:intergenic
ACCTTATACCCAGGAGGAGG+GGG 0.499594 1_1:+51774707 None:intergenic
TGTTGGGAACAGTTCACAAC+TGG 0.499616 1_1:-51773023 Msa0027470:intron
CAAGCAATTATAACGCCTCT+CGG 0.500884 1_1:+51774733 None:intergenic
TCAGTTGCAAGATGTGTATG+AGG 0.504627 1_1:+51774521 None:intergenic
AAAATGACATACTCCAACAA+TGG 0.509145 1_1:-51772306 Msa0027470:exon
AGCCACTATTCCGAGAATAC+AGG 0.511267 1_1:+51775252 None:intergenic
GTGGAGCAAGATTCAGGTAC+AGG 0.511524 1_1:-51772398 Msa0027470:CDS
GCTTGACCCATATGACAGTC+TGG 0.511749 1_1:+51773834 None:intergenic
GTGGCCCAAAAGCAGAGATC+AGG 0.514095 1_1:-51774561 Msa0027470:CDS
GTCTCCTGAAGCTTATGCTC+AGG 0.516719 1_1:-51773936 Msa0027470:CDS
CTCTTGTAGGGCGGATGTGT+TGG 0.518185 1_1:-51773877 Msa0027470:CDS
CGAGAGAGAATGCAGTGTAC+AGG 0.520018 1_1:-51772552 Msa0027470:CDS
ACTGCATCCCAGTGCAATGC+TGG 0.520186 1_1:+51772434 None:intergenic
TGTGGCGTTGCAAGCTTTGG+AGG 0.522269 1_1:-51774214 Msa0027470:CDS
AATTTGCTTTCATATGATGT+AGG 0.522506 1_1:-51772210 Msa0027470:three_prime_UTR
GAAGAACCAGACTGTCATAT+GGG 0.526121 1_1:-51773840 Msa0027470:CDS
GATAGAATACTGAGGCCAAA+AGG 0.526384 1_1:-51772512 Msa0027470:CDS
AAGTCCGCAAGACGAGGAGG+TGG 0.526904 1_1:+51773381 None:intergenic
GAGAAATGAGTGCTCTTGTA+GGG 0.527337 1_1:-51773889 Msa0027470:CDS
ACAGAGTGGAGGTTGTGTAC+CGG 0.528028 1_1:+51773778 None:intergenic
TCATTTCTCTCCATATTCTC+CGG 0.528512 1_1:+51773903 None:intergenic
CCCTTACACTCTTTCTAACA+AGG 0.532879 1_1:-51776147 Msa0027470:intron
TCAAAAGATCTACTAGGGTA+AGG 0.537128 1_1:+51774064 None:intergenic
TACTCCACCTCCTCGTCTTG+CGG 0.537168 1_1:-51773385 Msa0027470:CDS
CATTCATTCATCAAAGTCAC+AGG 0.541417 1_1:+51776255 None:intergenic
GAACTTGAATCATTAAGTTG+AGG 0.550003 1_1:-51775502 Msa0027470:five_prime_UTR
ATCCAGTTTGCTTTAGAGAG+AGG 0.550193 1_1:-51774127 Msa0027470:CDS
AGTTATTACTGGAAACTGCT+AGG 0.552946 1_1:-51773201 Msa0027470:CDS
AACCTTATACCCAGGAGGAG+GGG 0.553012 1_1:+51774706 None:intergenic
ATGGCTAAAGGAAGAGCAGA+TGG 0.553867 1_1:-51775338 Msa0027470:CDS
AAGCAATTATAACGCCTCTC+GGG 0.554098 1_1:+51774734 None:intergenic
CAAGTTCAAAAGATCTACTA+GGG 0.557506 1_1:+51774059 None:intergenic
GTTCACGTTGTAGAATCGAT+TGG 0.562540 1_1:-51774030 Msa0027470:CDS
TTATTGTGTAGTGGCAAGAA+TGG 0.564047 1_1:-51775357 Msa0027470:intron
AATAATAGATTCCAATCAAG+TGG 0.565081 1_1:-51774580 Msa0027470:intron
GAGAAATCAACCTTATACCC+AGG 0.565273 1_1:+51774698 None:intergenic
TCAACCTTATACCCAGGAGG+AGG 0.565572 1_1:+51774704 None:intergenic
GTTCTTGCCAGCATTGCACT+GGG 0.565594 1_1:-51772441 Msa0027470:CDS
AGCTTATGCTCAGGATGAAG+AGG 0.567186 1_1:-51773927 Msa0027470:CDS
CCTAGAACACCAAGATATGC+CGG 0.571775 1_1:+51774100 None:intergenic
CCAAAAGCAGAGATCAGGTA+TGG 0.573692 1_1:-51774556 Msa0027470:CDS
TTGTGCAGGATGTTTGGCAA+CGG 0.579340 1_1:-51773230 Msa0027470:intron
TGCAGTGACAAAACCTAATG+TGG 0.579494 1_1:-51772417 Msa0027470:CDS
CAGAAAATATAGTCCATGCA+TGG 0.581823 1_1:+51772582 None:intergenic
ATGCTCAGGATGAAGAGGAC+CGG 0.584377 1_1:-51773922 Msa0027470:CDS
CAACCTTATACCCAGGAGGA+GGG 0.584470 1_1:+51774705 None:intergenic
CGTATGATCTACTCCATGCA+TGG 0.586686 1_1:-51772595 Msa0027470:CDS
ATCGATTGGCTTCAAAGAGA+CGG 0.587659 1_1:-51774016 Msa0027470:CDS
GTAGTCAATCGAGCTGGCCA+AGG 0.587735 1_1:+51773405 None:intergenic
CTCAAGATCATATATGACAG+AGG 0.589807 1_1:-51773048 Msa0027470:CDS
CAATAAAATAAAACCTGACA+CGG 0.590040 1_1:-51773178 Msa0027470:CDS
AAGCCTGTAGCGTAGAGAAG+AGG 0.591425 1_1:+51772168 None:intergenic
AAAGCTTTAGATGTCGGAGG+AGG 0.592210 1_1:-51775203 Msa0027470:CDS
TACTTCTTCTTGAACTGGAT+AGG 0.593528 1_1:-51773991 Msa0027470:CDS
GAGTAAACAAAGTAGCCTCC+TGG 0.595078 1_1:+51773959 None:intergenic
TAGTTAAAGTCCGCAAGACG+AGG 0.598998 1_1:+51773375 None:intergenic
TGAAAGTGAGTTCCTCCACC+AGG 0.600536 1_1:+51774449 None:intergenic
TAATGACATTGCTAGTACAT+CGG 0.605402 1_1:+51774177 None:intergenic
AATAATATTATAAACAATGG+AGG 0.607875 1_1:-51774265 Msa0027470:CDS
ACTGGCAAAGCTTTAGATGT+CGG 0.608841 1_1:-51775209 Msa0027470:CDS
TCGGAACGTGATGGACATGA+AGG 0.609435 1_1:-51773154 Msa0027470:CDS
GAAATCTGACCAGAACTGGA+TGG 0.609998 1_1:-51774498 Msa0027470:CDS
GGTTTGTGATGATCGGCACT+CGG 0.612121 1_1:-51774852 Msa0027470:CDS
GCAGAGGTGCATAAAGCAAG+AGG 0.613537 1_1:-51773441 Msa0027470:intron
GGTGGAGTAGTCAATCGAGC+TGG 0.621531 1_1:+51773399 None:intergenic
TCAAGTTCCACAAATCGCCT+AGG 0.624730 1_1:+51775517 None:intergenic
GCTGACAACCGAGAGCATCC+GGG 0.625657 1_1:-51772336 Msa0027470:CDS
TAAGATCAGATGATGAAAAG+GGG 0.626499 1_1:+51776352 None:intergenic
TAACTCACAGGAATGGTCCT+CGG 0.631167 1_1:+51775164 None:intergenic
CCTTGTTAGAAAGAGTGTAA+GGG 0.631219 1_1:+51776147 None:intergenic
TGAAATGTTTGTAAAGGACA+TGG 0.631979 1_1:-51773346 Msa0027470:intron
CTGGATAGGATACTCAGACC+AGG 0.635130 1_1:-51773977 Msa0027470:CDS
TAATAATTCAGAAGAAGATG+TGG 0.638051 1_1:-51772358 Msa0027470:CDS
GTTGAGATAACTCACAGGAA+TGG 0.639279 1_1:+51775157 None:intergenic
TCAAGATCATATATGACAGA+GGG 0.644394 1_1:-51773047 Msa0027470:CDS
TGGCTAAAGGAAGAGCAGAT+GGG 0.647563 1_1:-51775337 Msa0027470:CDS
TGGAGTAGATCATACGTGCG+AGG 0.647861 1_1:+51772602 None:intergenic
TGACACGGTTCGGAACGTGA+TGG 0.649437 1_1:-51773163 Msa0027470:CDS
GACATTGTCCAATGCCCGAG+AGG 0.656529 1_1:-51774748 Msa0027470:CDS
GTAGTGGCAAGAATGGCTAA+AGG 0.660501 1_1:-51775350 Msa0027470:intron
AAATGAGTGCTCTTGTAGGG+CGG 0.661036 1_1:-51773886 Msa0027470:CDS
TGTTAGAAAGAGTGTAAGGG+AGG 0.663152 1_1:+51776150 None:intergenic
GGCAAAGCTTTAGATGTCGG+AGG 0.667661 1_1:-51775206 Msa0027470:CDS
TTAAAGTCCGCAAGACGAGG+AGG 0.668560 1_1:+51773378 None:intergenic
GGAGTAGATCATACGTGCGA+GGG 0.668937 1_1:+51772603 None:intergenic
CAGATGGGAACCCAAGAAAG+CGG 0.670400 1_1:-51775322 Msa0027470:CDS
AGTGAGTGCCTGAGTGAGTG+TGG 0.670851 1_1:-51775453 Msa0027470:intron
TCATCAGAACTACAGAGTGG+AGG 0.681664 1_1:+51773767 None:intergenic
ATGAGATTTCTGTCTAGACA+GGG 0.682706 1_1:+51774821 None:intergenic
GCAAGATTCAGGTACAGGTG+AGG 0.684250 1_1:-51772393 Msa0027470:CDS
GGTTCTCAAGTGTATCACCT+AGG 0.687833 1_1:-51775534 Msa0027470:five_prime_UTR
GAGATGACATTGTTGTACCG+AGG 0.702918 1_1:-51775181 Msa0027470:CDS
GATGATCCTGATACTGTTTG+GGG 0.707262 1_1:-51773746 Msa0027470:CDS
AAATCAACCTTATACCCAGG+AGG 0.723641 1_1:+51774701 None:intergenic
TCATCATCAGAACTACAGAG+TGG 0.727703 1_1:+51773764 None:intergenic
TTGAGATGGATAGAATACTG+AGG 0.734978 1_1:-51772520 Msa0027470:CDS
GGAGGAACTCACTTTCATCG+CGG 0.746135 1_1:-51774443 Msa0027470:CDS
GATAGGATACTCAGACCAGG+AGG 0.758692 1_1:-51773974 Msa0027470:CDS
AACAACGAATAAAATCAACA+CGG 0.758873 1_1:+51775289 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATCGATTTTTATATT+TGG - chr1_1:51772925-51772944 Msa0027470:intron 10.0%
!! AATAAAAGTTTACATACAAA+TGG + chr1_1:51772648-51772667 None:intergenic 15.0%
!! CCATTGTTTATAATATTATT+TGG + chr1_1:51774063-51774082 None:intergenic 15.0%
!! CCAAATAATATTATAAACAA+TGG - chr1_1:51774060-51774079 Msa0027470:CDS 15.0%
!! AATAATATTATAAACAATGG+AGG - chr1_1:51774063-51774082 Msa0027470:CDS 15.0%
!! ATGAATAGTTGTTAATATAA+AGG + chr1_1:51775357-51775376 None:intergenic 15.0%
!!! TTTTAAGGTTCATATTATAT+AGG + chr1_1:51775465-51775484 None:intergenic 15.0%
!!! GGTTATAAAAAGTTTTTTTT+TGG + chr1_1:51775657-51775676 None:intergenic 15.0%
!! GTATTGTATTGTATTGTATT+GGG + chr1_1:51772054-51772073 None:intergenic 20.0%
!! TATGAATAAGATGATGAAAA+TGG + chr1_1:51772252-51772271 None:intergenic 20.0%
!! ATAGAATAGAAATCAAATTG+TGG + chr1_1:51772535-51772554 None:intergenic 20.0%
!!! TTATTTCAAGTAATGAATTC+AGG - chr1_1:51772663-51772682 Msa0027470:intron 20.0%
!!! ATGACTTGATATTTTTGATT+TGG - chr1_1:51774017-51774036 Msa0027470:CDS 20.0%
!! ACAAATCATTGTATGAAATA+GGG + chr1_1:51774660-51774679 None:intergenic 20.0%
!! AACAAATCATTGTATGAAAT+AGG + chr1_1:51774661-51774680 None:intergenic 20.0%
!! AGAACAACAAAAGTAATATT+GGG + chr1_1:51774694-51774713 None:intergenic 20.0%
!! AAGAACAACAAAAGTAATAT+TGG + chr1_1:51774695-51774714 None:intergenic 20.0%
!! TAACGAAATAAAAAAGAACA+TGG + chr1_1:51774725-51774744 None:intergenic 20.0%
!! ACAATAGTCATGAATTAATT+CGG + chr1_1:51774823-51774842 None:intergenic 20.0%
!! TTCTAATGAAATGTTTGTAA+AGG - chr1_1:51774976-51774995 Msa0027470:intron 20.0%
!! TATATTCATTATTTGCAACA+AGG + chr1_1:51775416-51775435 None:intergenic 20.0%
! TACACACAAGAAAAAAAGTT+TGG - chr1_1:51772003-51772022 Msa0027470:three_prime_UTR 25.0%
! ACACACAAGAAAAAAAGTTT+GGG - chr1_1:51772004-51772023 Msa0027470:three_prime_UTR 25.0%
! TATTGTATTGTATTGGGATT+GGG + chr1_1:51772048-51772067 None:intergenic 25.0%
! GGTATTGTATTGTATTGTAT+TGG + chr1_1:51772055-51772074 None:intergenic 25.0%
! CAATGAAAAATGTTGCTAAA+GGG + chr1_1:51772133-51772152 None:intergenic 25.0%
! ACAATGAAAAATGTTGCTAA+AGG + chr1_1:51772134-51772153 None:intergenic 25.0%
! ATCATCTTATTCATACTTTC+TGG - chr1_1:51772257-51772276 Msa0027470:three_prime_UTR 25.0%
! TCATCTTATTCATACTTTCT+GGG - chr1_1:51772258-51772277 Msa0027470:three_prime_UTR 25.0%
! AAAACAATCCATTACATTAC+AGG + chr1_1:51772482-51772501 None:intergenic 25.0%
!!! AACTTGAATCATTAAGTTGA+GGG - chr1_1:51772827-51772846 Msa0027470:intron 25.0%
!!! GAATTTTGATTATTGTGTAG+TGG - chr1_1:51772962-51772981 Msa0027470:intron 25.0%
! AACAACGAATAAAATCAACA+CGG + chr1_1:51773042-51773061 None:intergenic 25.0%
! TTATCTTCTATTGAGTATAC+TGG - chr1_1:51773101-51773120 Msa0027470:CDS 25.0%
!! ATGTAAAAGTTGTTTAGTTC+AGG + chr1_1:51773196-51773215 None:intergenic 25.0%
!!! TTTACTCTTTTCACTTTTCA+AGG - chr1_1:51773455-51773474 Msa0027470:intron 25.0%
! AATAATAGATTCCAATCAAG+TGG - chr1_1:51773748-51773767 Msa0027470:CDS 25.0%
!! AAGTAACAATCATTTGTTAG+AGG + chr1_1:51774519-51774538 None:intergenic 25.0%
!!! TTACTTTTGTTGTTCTTGAT+AGG - chr1_1:51774698-51774717 Msa0027470:intron 25.0%
! CAATAGTCATGAATTAATTC+GGG + chr1_1:51774822-51774841 None:intergenic 25.0%
! TCGATTAAATGTGGAAAAAA+AGG + chr1_1:51775023-51775042 None:intergenic 25.0%
! CAATAAAATAAAACCTGACA+CGG - chr1_1:51775150-51775169 Msa0027470:intron 25.0%
! TTATATAGGTGGTTTCAAAT+GGG + chr1_1:51775451-51775470 None:intergenic 25.0%
! ATTATATAGGTGGTTTCAAA+TGG + chr1_1:51775452-51775471 None:intergenic 25.0%
! TAAGGTTCATATTATATAGG+TGG + chr1_1:51775462-51775481 None:intergenic 25.0%
! GAACCTTAAAATAAAAGAAG+AGG - chr1_1:51775474-51775493 Msa0027470:five_prime_UTR 25.0%
! TAATAATTCAGAAGAAGATG+TGG - chr1_1:51775970-51775989 Msa0027470:intron 25.0%
!!! GTTTTAAACTTCAAGTGAAA+TGG + chr1_1:51776060-51776079 None:intergenic 25.0%
!! AATTTGCTTTCATATGATGT+AGG - chr1_1:51776118-51776137 Msa0027470:intron 25.0%
! TAAGTTCAAAAAGACGATTT+AGG + chr1_1:51776206-51776225 None:intergenic 25.0%
!! TTTTCCTAATCACAATAACA+AGG + chr1_1:51776245-51776264 None:intergenic 25.0%
GTATTGTATTGTATTGGGAT+TGG + chr1_1:51772049-51772068 None:intergenic 30.0%
ATGAAAATGGATCTGAGAAA+TGG + chr1_1:51772239-51772258 None:intergenic 30.0%
! GGCATTTTTGTAAATGTAAG+TGG + chr1_1:51772293-51772312 None:intergenic 30.0%
AGTGATTGAACAGATATTGA+TGG + chr1_1:51772359-51772378 None:intergenic 30.0%
CATTGAAAGCTTGAAACTTT+CGG - chr1_1:51772401-51772420 Msa0027470:CDS 30.0%
ATTCCTTTGTGCAATTTCTA+TGG - chr1_1:51772436-51772455 Msa0027470:CDS 30.0%
AATCCATAGAAATTGCACAA+AGG + chr1_1:51772442-51772461 None:intergenic 30.0%
GTTAGTTAGTTATGACAGTT+TGG - chr1_1:51772581-51772600 Msa0027470:CDS 30.0%
! GAACTTGAATCATTAAGTTG+AGG - chr1_1:51772826-51772845 Msa0027470:intron 30.0%
!!! GTGTTGATTTTATTCGTTGT+TGG - chr1_1:51773041-51773060 Msa0027470:CDS 30.0%
! TTGATTTTATTCGTTGTTGG+TGG - chr1_1:51773044-51773063 Msa0027470:CDS 30.0%
! GTTTAGTTTACCTGTATTCT+CGG - chr1_1:51773066-51773085 Msa0027470:CDS 30.0%
!! TTTTCAAGGTTTGTGATGAT+CGG - chr1_1:51773469-51773488 Msa0027470:intron 30.0%
AATCAAGCTTCAATCTTGTT+TGG + chr1_1:51773536-51773555 None:intergenic 30.0%
AGCCAACATCAAAAACATTA+CGG + chr1_1:51774095-51774114 None:intergenic 30.0%
TAATGACATTGCTAGTACAT+CGG + chr1_1:51774154-51774173 None:intergenic 30.0%
! TGGTTTTCATGAACATCATT+CGG + chr1_1:51774180-51774199 None:intergenic 30.0%
CAAGTTCAAAAGATCTACTA+GGG + chr1_1:51774272-51774291 None:intergenic 30.0%
TGAAATGTTTGTAAAGGACA+TGG - chr1_1:51774982-51775001 Msa0027470:intron 30.0%
ATCATGTCTTCGATTAAATG+TGG + chr1_1:51775032-51775051 None:intergenic 30.0%
TTTGAAGGACAAAGATGTTT+GGG - chr1_1:51775222-51775241 Msa0027470:CDS 30.0%
TATATGATCTTGAGTGTGTT+AGG + chr1_1:51775274-51775293 None:intergenic 30.0%
TCAAGATCATATATGACAGA+GGG - chr1_1:51775281-51775300 Msa0027470:CDS 30.0%
!!! AGGCCTCTTCTTTTATTTTA+AGG + chr1_1:51775480-51775499 None:intergenic 30.0%
CTAGTTAAAGATGTATCGTT+CGG - chr1_1:51775521-51775540 Msa0027470:five_prime_UTR 30.0%
TAGTTAAAGATGTATCGTTC+GGG - chr1_1:51775522-51775541 Msa0027470:five_prime_UTR 30.0%
ATCCTAACTGTAACAATCAT+TGG - chr1_1:51775560-51775579 Msa0027470:intron 30.0%
!!! TTTTTTTTGGTCTTAACCTC+CGG + chr1_1:51775644-51775663 None:intergenic 30.0%
TTACATTGATGCACAAAACA+AGG + chr1_1:51775678-51775697 None:intergenic 30.0%
! ACAGGATTTATTGATTGAGA+TGG - chr1_1:51775794-51775813 Msa0027470:intron 30.0%
! CGAATAATTACGAAACCTTT+TGG + chr1_1:51775834-51775853 None:intergenic 30.0%
!!! TATGTCATTTTTCTGAAACC+CGG + chr1_1:51776013-51776032 None:intergenic 30.0%
AAAATGACATACTCCAACAA+TGG - chr1_1:51776022-51776041 Msa0027470:intron 30.0%
AAATGACATACTCCAACAAT+GGG - chr1_1:51776023-51776042 Msa0027470:intron 30.0%
AGAAGAGGAACAACATAAAA+AGG + chr1_1:51776148-51776167 None:intergenic 30.0%
!! CGAAATTGATTTGAAGTTAG+TGG - chr1_1:51776321-51776340 Msa0027470:intron 30.0%
ATTGTATTGGGATTGGGATA+TGG + chr1_1:51772042-51772061 None:intergenic 35.0%
CATTCATTCATCAAAGTCAC+AGG + chr1_1:51772076-51772095 None:intergenic 35.0%
!! TGTAAGGGAGGTATTGAATT+TGG + chr1_1:51772169-51772188 None:intergenic 35.0%
! CCTTGTTAGAAAGAGTGTAA+GGG + chr1_1:51772184-51772203 None:intergenic 35.0%
! ACCTTGTTAGAAAGAGTGTA+AGG + chr1_1:51772185-51772204 None:intergenic 35.0%
ATGCAAGAAGAGGAAAAAGT+TGG + chr1_1:51772314-51772333 None:intergenic 35.0%
ATGGCACAAAGAATTTGAAG+TGG + chr1_1:51772340-51772359 None:intergenic 35.0%
ACTCAACTGTGTTCATCAAA+TGG - chr1_1:51772376-51772395 Msa0027470:CDS 35.0%
CTCAACTGTGTTCATCAAAT+GGG - chr1_1:51772377-51772396 Msa0027470:CDS 35.0%
! TTACCACATAACTGACTCAA+GGG + chr1_1:51772624-51772643 None:intergenic 35.0%
! ATTACCACATAACTGACTCA+AGG + chr1_1:51772625-51772644 None:intergenic 35.0%
! TGAGTGTGGTCAGAAAATTT+TGG - chr1_1:51772889-51772908 Msa0027470:intron 35.0%
! GAGTGTGGTCAGAAAATTTT+GGG - chr1_1:51772890-51772909 Msa0027470:intron 35.0%
TTATTGTGTAGTGGCAAGAA+TGG - chr1_1:51772971-51772990 Msa0027470:intron 35.0%
TAAGCAGTGTTGTCAAATAG+CGG - chr1_1:51773218-51773237 Msa0027470:CDS 35.0%
!! ACCACTATTGTTCTGAGATA+TGG - chr1_1:51773274-51773293 Msa0027470:intron 35.0%
TCCATATCTCAGAACAATAG+TGG + chr1_1:51773278-51773297 None:intergenic 35.0%
! TCACGGATTGCAAAAAAAAG+CGG + chr1_1:51773374-51773393 None:intergenic 35.0%
ATGAGATTTCTGTCTAGACA+GGG + chr1_1:51773510-51773529 None:intergenic 35.0%
TATGAGATTTCTGTCTAGAC+AGG + chr1_1:51773511-51773530 None:intergenic 35.0%
! GAAGCTTGATTTGACTTTGA+TGG - chr1_1:51773545-51773564 Msa0027470:intron 35.0%
CTTAGACACTGCTTCTTATA+TGG - chr1_1:51773652-51773671 Msa0027470:intron 35.0%
! GGTGAAAAGATAGTTTTTCC+TGG - chr1_1:51773861-51773880 Msa0027470:CDS 35.0%
! GAAAAGATAGTTTTTCCTGG+TGG - chr1_1:51773864-51773883 Msa0027470:CDS 35.0%
!! CTCCGTAATGTTTTTGATGT+TGG - chr1_1:51774090-51774109 Msa0027470:CDS 35.0%
!! AATGTTTTTGATGTTGGCTG+TGG - chr1_1:51774096-51774115 Msa0027470:CDS 35.0%
!! TCTCTAAAGCAAACTGGATT+TGG + chr1_1:51774200-51774219 None:intergenic 35.0%
TCAAAAGATCTACTAGGGTA+AGG + chr1_1:51774267-51774286 None:intergenic 35.0%
GCAAGTTCAAAAGATCTACT+AGG + chr1_1:51774273-51774292 None:intergenic 35.0%
TACTTCTTCTTGAACTGGAT+AGG - chr1_1:51774337-51774356 Msa0027470:intron 35.0%
TCATTTCTCTCCATATTCTC+CGG + chr1_1:51774428-51774447 None:intergenic 35.0%
! TGTTACTTAAAAAGAGAGCC+CGG - chr1_1:51774531-51774550 Msa0027470:CDS 35.0%
ATGATGATCCTGATACTGTT+TGG - chr1_1:51774580-51774599 Msa0027470:intron 35.0%
TGATGATCCTGATACTGTTT+GGG - chr1_1:51774581-51774600 Msa0027470:intron 35.0%
TGTTAGTGTTGCACATTGTT+CGG - chr1_1:51774781-51774800 Msa0027470:CDS 35.0%
TCGAAGACATGATAGTTTCA+TGG - chr1_1:51775039-51775058 Msa0027470:intron 35.0%
ACATCCTGCACAAAATTAGT+CGG + chr1_1:51775091-51775110 None:intergenic 35.0%
! CTAATTTTGTGCAGGATGTT+TGG - chr1_1:51775092-51775111 Msa0027470:intron 35.0%
AACGGAGAGTTAGTTATTAC+TGG - chr1_1:51775116-51775135 Msa0027470:intron 35.0%
AGTTATTACTGGAAACTGCT+AGG - chr1_1:51775127-51775146 Msa0027470:intron 35.0%
AAATAAAACCTGACACGGTT+CGG - chr1_1:51775155-51775174 Msa0027470:intron 35.0%
ATGGACATGAAGGCAAATTT+GGG - chr1_1:51775184-51775203 Msa0027470:CDS 35.0%
! CTTTGAAGGACAAAGATGTT+TGG - chr1_1:51775221-51775240 Msa0027470:CDS 35.0%
ATGAATGTAGTGCCTGAAAA+CGG - chr1_1:51775247-51775266 Msa0027470:CDS 35.0%
CTCAAGATCATATATGACAG+AGG - chr1_1:51775280-51775299 Msa0027470:CDS 35.0%
GCATGAAACTCAATTGATAC+AGG + chr1_1:51775500-51775519 None:intergenic 35.0%
TTACAGTTAGGATTCGAACT+CGG + chr1_1:51775553-51775572 None:intergenic 35.0%
GACCAATGATTGTTACAGTT+AGG + chr1_1:51775565-51775584 None:intergenic 35.0%
AACTGTAACAATCATTGGTC+AGG - chr1_1:51775565-51775584 Msa0027470:intron 35.0%
!!! TTTTTTTGGTCTTAACCTCC+GGG + chr1_1:51775643-51775662 None:intergenic 35.0%
TTGTGCATCAATGTAACAAC+AGG - chr1_1:51775682-51775701 Msa0027470:intron 35.0%
CAGAAAATATAGTCCATGCA+TGG + chr1_1:51775749-51775768 None:intergenic 35.0%
TTGAGATGGATAGAATACTG+AGG - chr1_1:51775808-51775827 Msa0027470:intron 35.0%
GATCAGTTGTGTTGTCTATA+AGG - chr1_1:51775862-51775881 Msa0027470:intron 35.0%
!! CACACCTTGTTATTGTGATT+AGG - chr1_1:51776238-51776257 Msa0027470:five_prime_UTR 35.0%
! TGTTAGAAAGAGTGTAAGGG+AGG + chr1_1:51772181-51772200 None:intergenic 40.0%
CCCTTACACTCTTTCTAACA+AGG - chr1_1:51772181-51772200 Msa0027470:three_prime_UTR 40.0%
TTCACGTGCCTGTAATGTAA+TGG - chr1_1:51772471-51772490 Msa0027470:CDS 40.0%
TTTCCCTTGAGTCAGTTATG+TGG - chr1_1:51772618-51772637 Msa0027470:CDS 40.0%
TGTATGCAGTTCTTGCTTTG+TGG - chr1_1:51772773-51772792 Msa0027470:intron 40.0%
!! TTAAGTTGAGGGCTTCTTGT+TGG - chr1_1:51772838-51772857 Msa0027470:intron 40.0%
! TAAGTTGAGGGCTTCTTGTT+GGG - chr1_1:51772839-51772858 Msa0027470:intron 40.0%
TTGTGATCAACCGCTTTCTT+GGG + chr1_1:51773019-51773038 None:intergenic 40.0%
TACCTGTATTCTCGGAATAG+TGG - chr1_1:51773074-51773093 Msa0027470:CDS 40.0%
!! ACTGGCAAAGCTTTAGATGT+CGG - chr1_1:51773119-51773138 Msa0027470:CDS 40.0%
GTTGAGATAACTCACAGGAA+TGG + chr1_1:51773174-51773193 None:intergenic 40.0%
!! TTCAGGTTGAGATAACTCAC+AGG + chr1_1:51773179-51773198 None:intergenic 40.0%
CGGCTATAGTGTTATAGTGT+AGG - chr1_1:51773238-51773257 Msa0027470:intron 40.0%
GGGAAGGGCTAAATTAATCA+CGG + chr1_1:51773391-51773410 None:intergenic 40.0%
GTAATAGACACCAACACTTG+AGG + chr1_1:51773419-51773438 None:intergenic 40.0%
AAGCAATTATAACGCCTCTC+GGG + chr1_1:51773597-51773616 None:intergenic 40.0%
CAAGCAATTATAACGCCTCT+CGG + chr1_1:51773598-51773617 None:intergenic 40.0%
AAATCAACCTTATACCCAGG+AGG + chr1_1:51773630-51773649 None:intergenic 40.0%
GAGAAATCAACCTTATACCC+AGG + chr1_1:51773633-51773652 None:intergenic 40.0%
!! CATACCTGATCTCTGCTTTT+GGG + chr1_1:51773774-51773793 None:intergenic 40.0%
TCAGTTGCAAGATGTGTATG+AGG + chr1_1:51773810-51773829 None:intergenic 40.0%
! CTTTTACTACCATCCAGTTC+TGG + chr1_1:51773842-51773861 None:intergenic 40.0%
CAGAACTGGATGGTAGTAAA+AGG - chr1_1:51773840-51773859 Msa0027470:CDS 40.0%
! AAGATAGTTTTTCCTGGTGG+AGG - chr1_1:51773867-51773886 Msa0027470:CDS 40.0%
CATCAATTGCCAATGTAAGC+TGG - chr1_1:51773925-51773944 Msa0027470:CDS 40.0%
CAAGAGTAACCAGCTTACAT+TGG + chr1_1:51773937-51773956 None:intergenic 40.0%
!! ATCCAGTTTGCTTTAGAGAG+AGG - chr1_1:51774201-51774220 Msa0027470:CDS 40.0%
!! TTCCTCTCTCTAAAGCAAAC+TGG + chr1_1:51774206-51774225 None:intergenic 40.0%
!! TGCTTTAGAGAGAGGAATTC+CGG - chr1_1:51774209-51774228 Msa0027470:CDS 40.0%
GTTCACGTTGTAGAATCGAT+TGG - chr1_1:51774298-51774317 Msa0027470:intron 40.0%
!! ATCGATTGGCTTCAAAGAGA+CGG - chr1_1:51774312-51774331 Msa0027470:intron 40.0%
AGAGAAATGAGTGCTCTTGT+AGG - chr1_1:51774438-51774457 Msa0027470:CDS 40.0%
GAGAAATGAGTGCTCTTGTA+GGG - chr1_1:51774439-51774458 Msa0027470:CDS 40.0%
!! TATGACAGTCTGGTTCTTCT+TGG + chr1_1:51774487-51774506 None:intergenic 40.0%
AGAAGAACCAGACTGTCATA+TGG - chr1_1:51774487-51774506 Msa0027470:CDS 40.0%
GAAGAACCAGACTGTCATAT+GGG - chr1_1:51774488-51774507 Msa0027470:CDS 40.0%
TCATCATCAGAACTACAGAG+TGG + chr1_1:51774567-51774586 None:intergenic 40.0%
GATGATCCTGATACTGTTTG+GGG - chr1_1:51774582-51774601 Msa0027470:intron 40.0%
TTAACTCCCCAAACAGTATC+AGG + chr1_1:51774591-51774610 None:intergenic 40.0%
CATCCTGCACAAAATTAGTC+GGG + chr1_1:51775090-51775109 None:intergenic 40.0%
GATGGACATGAAGGCAAATT+TGG - chr1_1:51775183-51775202 Msa0027470:CDS 40.0%
!! TTCTTTTGCAGCTGCTTTGA+AGG - chr1_1:51775207-51775226 Msa0027470:CDS 40.0%
TGAATGTAGTGCCTGAAAAC+GGG - chr1_1:51775248-51775267 Msa0027470:CDS 40.0%
ATATATGACAGAGGGCTGTT+GGG - chr1_1:51775289-51775308 Msa0027470:CDS 40.0%
GATAGAATACTGAGGCCAAA+AGG - chr1_1:51775816-51775835 Msa0027470:intron 40.0%
TGCAGTGACAAAACCTAATG+TGG - chr1_1:51775911-51775930 Msa0027470:intron 40.0%
GTTAAGACTTTGCCCATTGT+TGG + chr1_1:51776038-51776057 None:intergenic 40.0%
GAAGTGGAAGATGCAAGAAG+AGG + chr1_1:51772324-51772343 None:intergenic 45.0%
GGTTCTCAAGTGTATCACCT+AGG - chr1_1:51772794-51772813 Msa0027470:intron 45.0%
TGTATCACCTAGGCGATTTG+TGG - chr1_1:51772804-51772823 Msa0027470:intron 45.0%
TCAAGTTCCACAAATCGCCT+AGG + chr1_1:51772814-51772833 None:intergenic 45.0%
! TTTTCTGACCACACTCACTC+AGG + chr1_1:51772886-51772905 None:intergenic 45.0%
GTAGTGGCAAGAATGGCTAA+AGG - chr1_1:51772978-51772997 Msa0027470:intron 45.0%
ATGGCTAAAGGAAGAGCAGA+TGG - chr1_1:51772990-51773009 Msa0027470:intron 45.0%
TGGCTAAAGGAAGAGCAGAT+GGG - chr1_1:51772991-51773010 Msa0027470:intron 45.0%
GTTGTGATCAACCGCTTTCT+TGG + chr1_1:51773020-51773039 None:intergenic 45.0%
AGCCACTATTCCGAGAATAC+AGG + chr1_1:51773079-51773098 None:intergenic 45.0%
!! AAAGCTTTAGATGTCGGAGG+AGG - chr1_1:51773125-51773144 Msa0027470:CDS 45.0%
GAGATGACATTGTTGTACCG+AGG - chr1_1:51773147-51773166 Msa0027470:CDS 45.0%
TAACTCACAGGAATGGTCCT+CGG + chr1_1:51773167-51773186 None:intergenic 45.0%
ACACCAACACTTGAGGCTAA+CGG + chr1_1:51773412-51773431 None:intergenic 45.0%
! CCATACCTGATCTCTGCTTT+TGG + chr1_1:51773775-51773794 None:intergenic 45.0%
CCAAAAGCAGAGATCAGGTA+TGG - chr1_1:51773772-51773791 Msa0027470:CDS 45.0%
CTGAGAAATCTGACCAGAAC+TGG - chr1_1:51773826-51773845 Msa0027470:CDS 45.0%
GAAATCTGACCAGAACTGGA+TGG - chr1_1:51773830-51773849 Msa0027470:CDS 45.0%
AGAGGAATTCCGGCATATCT+TGG - chr1_1:51774219-51774238 Msa0027470:CDS 45.0%
CCTAGAACACCAAGATATGC+CGG + chr1_1:51774231-51774250 None:intergenic 45.0%
!! CGGCATATCTTGGTGTTCTA+GGG - chr1_1:51774229-51774248 Msa0027470:CDS 45.0%
CGGCATACTTCTTCTTGAAC+TGG - chr1_1:51774332-51774351 Msa0027470:intron 45.0%
GAGTAAACAAAGTAGCCTCC+TGG + chr1_1:51774372-51774391 None:intergenic 45.0%
TCATCCTGAGCATAAGCTTC+AGG + chr1_1:51774399-51774418 None:intergenic 45.0%
AGCTTATGCTCAGGATGAAG+AGG - chr1_1:51774401-51774420 Msa0027470:intron 45.0%
ATGAAGAGGACCGGAGAATA+TGG - chr1_1:51774415-51774434 Msa0027470:CDS 45.0%
AAATGAGTGCTCTTGTAGGG+CGG - chr1_1:51774442-51774461 Msa0027470:CDS 45.0%
TCATCAGAACTACAGAGTGG+AGG + chr1_1:51774564-51774583 None:intergenic 45.0%
GCATAGTCGAGGAGAATATC+TGG + chr1_1:51774869-51774888 None:intergenic 45.0%
TATTCTCCTCGACTATGCAG+AGG - chr1_1:51774871-51774890 Msa0027470:intron 45.0%
! GAGGAAGTGATTTGTCTCCT+TGG - chr1_1:51774906-51774925 Msa0027470:intron 45.0%
TAGTTAAAGTCCGCAAGACG+AGG + chr1_1:51774956-51774975 None:intergenic 45.0%
! TGACCCGACTAATTTTGTGC+AGG - chr1_1:51775084-51775103 Msa0027470:intron 45.0%
TTGTGCAGGATGTTTGGCAA+CGG - chr1_1:51775098-51775117 Msa0027470:intron 45.0%
CATATATGACAGAGGGCTGT+TGG - chr1_1:51775288-51775307 Msa0027470:CDS 45.0%
TGTTGGGAACAGTTCACAAC+TGG - chr1_1:51775305-51775324 Msa0027470:CDS 45.0%
GGAACAGTTCACAACTGGTA+TGG - chr1_1:51775310-51775329 Msa0027470:CDS 45.0%
TATTTACCTAAGCCGCACTC+CGG - chr1_1:51775591-51775610 Msa0027470:intron 45.0%
CGTATGATCTACTCCATGCA+TGG - chr1_1:51775733-51775752 Msa0027470:intron 45.0%
CCTGAATCTTGCTCCACATT+AGG + chr1_1:51775927-51775946 None:intergenic 45.0%
CCTAATGTGGAGCAAGATTC+AGG - chr1_1:51775924-51775943 Msa0027470:intron 45.0%
CAGATGGGAACCCAAGAAAG+CGG - chr1_1:51773006-51773025 Msa0027470:intron 50.0%
!! GGCAAAGCTTTAGATGTCGG+AGG - chr1_1:51773122-51773141 Msa0027470:CDS 50.0%
ACACTTGAGGCTAACGGGAA+GGG + chr1_1:51773406-51773425 None:intergenic 50.0%
AACACTTGAGGCTAACGGGA+AGG + chr1_1:51773407-51773426 None:intergenic 50.0%
! TTCCCGTTAGCCTCAAGTGT+TGG - chr1_1:51773406-51773425 Msa0027470:CDS 50.0%
CACCAACACTTGAGGCTAAC+GGG + chr1_1:51773411-51773430 None:intergenic 50.0%
GGTTTGTGATGATCGGCACT+CGG - chr1_1:51773476-51773495 Msa0027470:intron 50.0%
TTATAACGCCTCTCGGGCAT+TGG + chr1_1:51773591-51773610 None:intergenic 50.0%
AACCTTATACCCAGGAGGAG+GGG + chr1_1:51773625-51773644 None:intergenic 50.0%
CAACCTTATACCCAGGAGGA+GGG + chr1_1:51773626-51773645 None:intergenic 50.0%
TCAACCTTATACCCAGGAGG+AGG + chr1_1:51773627-51773646 None:intergenic 50.0%
!! CTGCTTTTGGGCCACTTGAT+TGG + chr1_1:51773762-51773781 None:intergenic 50.0%
TGAAAGTGAGTTCCTCCACC+AGG + chr1_1:51773882-51773901 None:intergenic 50.0%
GGAGGAACTCACTTTCATCG+CGG - chr1_1:51773885-51773904 Msa0027470:CDS 50.0%
!! CCGGCATATCTTGGTGTTCT+AGG - chr1_1:51774228-51774247 Msa0027470:CDS 50.0%
CTGGATAGGATACTCAGACC+AGG - chr1_1:51774351-51774370 Msa0027470:intron 50.0%
GATAGGATACTCAGACCAGG+AGG - chr1_1:51774354-51774373 Msa0027470:intron 50.0%
GTCTCCTGAAGCTTATGCTC+AGG - chr1_1:51774392-51774411 Msa0027470:intron 50.0%
ATGCTCAGGATGAAGAGGAC+CGG - chr1_1:51774406-51774425 Msa0027470:intron 50.0%
GCTTGACCCATATGACAGTC+TGG + chr1_1:51774497-51774516 None:intergenic 50.0%
ACAGAGTGGAGGTTGTGTAC+CGG + chr1_1:51774553-51774572 None:intergenic 50.0%
TATGCACCTCTGCATAGTCG+AGG + chr1_1:51774880-51774899 None:intergenic 50.0%
! GCAGAGGTGCATAAAGCAAG+AGG - chr1_1:51774887-51774906 Msa0027470:intron 50.0%
TTAAAGTCCGCAAGACGAGG+AGG + chr1_1:51774953-51774972 None:intergenic 50.0%
ATACCCACGATCAGACAAGG+TGG + chr1_1:51775065-51775084 None:intergenic 50.0%
GTCATACCCACGATCAGACA+AGG + chr1_1:51775068-51775087 None:intergenic 50.0%
!! TCGGAACGTGATGGACATGA+AGG - chr1_1:51775174-51775193 Msa0027470:CDS 50.0%
! AGTGTGTTAGGCCCGTTTTC+AGG + chr1_1:51775262-51775281 None:intergenic 50.0%
! GGGAAGACCCTTTGGTAATC+CGG + chr1_1:51775613-51775632 None:intergenic 50.0%
ATTACCAAAGGGTCTTCCCC+TGG - chr1_1:51775614-51775633 Msa0027470:intron 50.0%
TTACCAAAGGGTCTTCCCCT+GGG - chr1_1:51775615-51775634 Msa0027470:intron 50.0%
GGAGTAGATCATACGTGCGA+GGG + chr1_1:51775728-51775747 None:intergenic 50.0%
TGGAGTAGATCATACGTGCG+AGG + chr1_1:51775729-51775748 None:intergenic 50.0%
CGAGAGAGAATGCAGTGTAC+AGG - chr1_1:51775776-51775795 Msa0027470:intron 50.0%
AGTTCTTGCCAGCATTGCAC+TGG - chr1_1:51775886-51775905 Msa0027470:intron 50.0%
GTTCTTGCCAGCATTGCACT+GGG - chr1_1:51775887-51775906 Msa0027470:intron 50.0%
GTGGAGCAAGATTCAGGTAC+AGG - chr1_1:51775930-51775949 Msa0027470:intron 50.0%
GCAAGATTCAGGTACAGGTG+AGG - chr1_1:51775935-51775954 Msa0027470:intron 50.0%
!! TTCTGAAACCCGGATGCTCT+CGG + chr1_1:51776003-51776022 None:intergenic 50.0%
GTTCCTCTTCTCTACGCTAC+AGG - chr1_1:51776157-51776176 Msa0027470:five_prime_UTR 50.0%
AAGCCTGTAGCGTAGAGAAG+AGG + chr1_1:51776163-51776182 None:intergenic 50.0%
AGTGAGTGCCTGAGTGAGTG+TGG - chr1_1:51772875-51772894 Msa0027470:intron 55.0%
GACATTGTCCAATGCCCGAG+AGG - chr1_1:51773580-51773599 Msa0027470:intron 55.0%
ACCTTATACCCAGGAGGAGG+GGG + chr1_1:51773624-51773643 None:intergenic 55.0%
GTGGCCCAAAAGCAGAGATC+AGG - chr1_1:51773767-51773786 Msa0027470:CDS 55.0%
! TGTGGCGTTGCAAGCTTTGG+AGG - chr1_1:51774114-51774133 Msa0027470:CDS 55.0%
CTCTTGTAGGGCGGATGTGT+TGG - chr1_1:51774451-51774470 Msa0027470:CDS 55.0%
CAGAGTGGAGGTTGTGTACC+GGG + chr1_1:51774552-51774571 None:intergenic 55.0%
GTAGTCAATCGAGCTGGCCA+AGG + chr1_1:51774926-51774945 None:intergenic 55.0%
GGTGGAGTAGTCAATCGAGC+TGG + chr1_1:51774932-51774951 None:intergenic 55.0%
TACTCCACCTCCTCGTCTTG+CGG - chr1_1:51774943-51774962 Msa0027470:intron 55.0%
ATGGCCACCTTGTCTGATCG+TGG - chr1_1:51775058-51775077 Msa0027470:intron 55.0%
TGGCCACCTTGTCTGATCGT+GGG - chr1_1:51775059-51775078 Msa0027470:intron 55.0%
ATCACGTTCCGAACCGTGTC+AGG + chr1_1:51775166-51775185 None:intergenic 55.0%
! TGACACGGTTCGGAACGTGA+TGG - chr1_1:51775165-51775184 Msa0027470:intron 55.0%
! CCCTTTGGTAATCCGGAGTG+CGG + chr1_1:51775606-51775625 None:intergenic 55.0%
CCGCACTCCGGATTACCAAA+GGG - chr1_1:51775603-51775622 Msa0027470:intron 55.0%
TCTTAACCTCCGGGTTCCCA+GGG + chr1_1:51775634-51775653 None:intergenic 55.0%
ACTGCATCCCAGTGCAATGC+TGG + chr1_1:51775897-51775916 None:intergenic 55.0%
TGCTTGATTCCCCCTCCTCC+TGG - chr1_1:51773612-51773631 Msa0027470:intron 60.0%
GCTTGATTCCCCCTCCTCCT+GGG - chr1_1:51773613-51773632 Msa0027470:intron 60.0%
TCCCCCTCCTCCTGGGTATA+AGG - chr1_1:51773620-51773639 Msa0027470:intron 60.0%
GGCTGTGGCGTTGCAAGCTT+TGG - chr1_1:51774111-51774130 Msa0027470:CDS 60.0%
AAGTCCGCAAGACGAGGAGG+TGG + chr1_1:51774950-51774969 None:intergenic 60.0%
GGTAATCCGGAGTGCGGCTT+AGG + chr1_1:51775600-51775619 None:intergenic 60.0%
GCCGCACTCCGGATTACCAA+AGG - chr1_1:51775602-51775621 Msa0027470:intron 60.0%
GTTCCCAGGGGAAGACCCTT+TGG + chr1_1:51775621-51775640 None:intergenic 60.0%
CTTAACCTCCGGGTTCCCAG+GGG + chr1_1:51775633-51775652 None:intergenic 60.0%
GTCTTAACCTCCGGGTTCCC+AGG + chr1_1:51775635-51775654 None:intergenic 60.0%
!! GGCTGACAACCGAGAGCATC+CGG - chr1_1:51775991-51776010 Msa0027470:intron 60.0%
!! GCTGACAACCGAGAGCATCC+GGG - chr1_1:51775992-51776011 Msa0027470:intron 60.0%
AGGGTCTTCCCCTGGGAACC+CGG - chr1_1:51775622-51775641 Msa0027470:intron 65.0%
GTCTTCCCCTGGGAACCCGG+AGG - chr1_1:51775625-51775644 Msa0027470:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 51771979 51776371 51771979 ID=Msa0027470;Name=Msa0027470
chr1_1 mRNA 51771979 51776371 51771979 ID=Msa0027470-mRNA-1;Parent=Msa0027470;Name=Msa0027470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=327|1|1|1|0.66|0.6|10|343|596
chr1_1 exon 51771979 51772646 51771979 ID=Msa0027470-mRNA-1:exon:15191;Parent=Msa0027470-mRNA-1
chr1_1 exon 51773024 51773244 51773024 ID=Msa0027470-mRNA-1:exon:15190;Parent=Msa0027470-mRNA-1
chr1_1 exon 51773347 51773459 51773347 ID=Msa0027470-mRNA-1:exon:15189;Parent=Msa0027470-mRNA-1
chr1_1 exon 51773708 51774302 51773708 ID=Msa0027470-mRNA-1:exon:15188;Parent=Msa0027470-mRNA-1
chr1_1 exon 51774412 51774594 51774412 ID=Msa0027470-mRNA-1:exon:15187;Parent=Msa0027470-mRNA-1
chr1_1 exon 51774709 51774873 51774709 ID=Msa0027470-mRNA-1:exon:15186;Parent=Msa0027470-mRNA-1
chr1_1 exon 51775172 51775368 51775172 ID=Msa0027470-mRNA-1:exon:15185;Parent=Msa0027470-mRNA-1
chr1_1 exon 51775454 51775568 51775454 ID=Msa0027470-mRNA-1:exon:15184;Parent=Msa0027470-mRNA-1
chr1_1 exon 51776148 51776337 51776148 ID=Msa0027470-mRNA-1:exon:15183;Parent=Msa0027470-mRNA-1
chr1_1 exon 51776358 51776371 51776358 ID=Msa0027470-mRNA-1:exon:15182;Parent=Msa0027470-mRNA-1
chr1_1 five_prime_UTR 51776358 51776371 51776358 ID=Msa0027470-mRNA-1:five_prime_utr;Parent=Msa0027470-mRNA-1
chr1_1 five_prime_UTR 51776148 51776337 51776148 ID=Msa0027470-mRNA-1:five_prime_utr;Parent=Msa0027470-mRNA-1
chr1_1 five_prime_UTR 51775454 51775568 51775454 ID=Msa0027470-mRNA-1:five_prime_utr;Parent=Msa0027470-mRNA-1
chr1_1 five_prime_UTR 51775361 51775368 51775361 ID=Msa0027470-mRNA-1:five_prime_utr;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51775172 51775360 51775172 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51774709 51774873 51774709 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51774412 51774594 51774412 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51773708 51774302 51773708 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51773347 51773459 51773347 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51773024 51773244 51773024 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 CDS 51772322 51772646 51772322 ID=Msa0027470-mRNA-1:cds;Parent=Msa0027470-mRNA-1
chr1_1 three_prime_UTR 51771979 51772321 51771979 ID=Msa0027470-mRNA-1:three_prime_utr;Parent=Msa0027470-mRNA-1
Gene Sequence

>Msa0027470

ATGGCTAAAGGAAGAGCAGATGGGAACCCAAGAAAGCGGTTGATCACAACCGTGTTGATTTTATTCGTTGTTGGTGGTTTAGTTTACCTGTATTCTCGGAATAGTGGCTCATTATCTTCTATTGAGTATACTGGCAAAGCTTTAGATGTCGGAGGAGGAGATGACATTGTTGTACCGAGGACCATTCCTGTTTGTGATGATCGGCACTCGGAGCTAATTCCCTGTCTAGACAGAAATCTCATATACCAAACAAGATTGAAGCTTGATTTGACTTTGATGGAGCATTATGAGCGACATTGTCCAATGCCCGAGAGGCGTTATAATTGCTTGATTCCCCCTCCTCCTGGGTATAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTATGGAGAGCAAATATACCTCATACACATCTTGCAACTGAGAAATCTGACCAGAACTGGATGGTAGTAAAAGGTGAAAAGATAGTTTTTCCTGGTGGAGGAACTCACTTTCATCGCGGTGCTGATAAGTATATTGCATCAATTGCCAATATGCTCAATTTTCCAAATAATATTATAAACAATGGAGGAAGACTCCGTAATGTTTTTGATGTTGGCTGTGGCGTTGCAAGCTTTGGAGGATATCTTCTTTCTTCCGATGTACTAGCAATGTCATTAGCACCGAATGATGTTCATGAAAACCAAATCCAGTTTGCTTTAGAGAGAGGAATTCCGGCATATCTTGGTGTTCTAGGGACATTCAGACTACCTTACCCTAGTAGATCTTTTGAACTTGCTCATTGTTCACGTTGTAGAATCGATTGGCTTCAAAGAGACGGCATACTTCTTCTTGAACTGGATAGGATACTCAGACCAGGAGGCTACTTTGTTTACTCGTCTCCTGAAGCTTATGCTCAGGATGAAGAGGACCGGAGAATATGGAGAGAAATGAGTGCTCTTGTAGGGCGGATGTGTTGGAAAGTAGCTGCCAAGAAGAACCAGACTGTCATATGGGTCAAGCCTCTAACAAATGATTGTTACTTAAAAAGAGAGCCCGGTACACAACCTCCACTCTGTAGTTCTGATGATGATCCTGATACTGTTTGGGGAGTTAAAATGAAAGCTTGCATCACACGTTACTCTGATCAGGTGCATAAAGCAAGAGGAAGTGATTTGTCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTTGCGGACTTTAACTATTCTAATGAAATGTTTGTAAAGGACATGGATGTTTGGCAACGGAGAGTTAGTTATTACTGGAAACTGCTAGGCAATAAAATAAAACCTGACACGGTTCGGAACGTGATGGACATGAAGGCAAATTTGGGTTCTTTTGCAGCTGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTAGTGCCTGAAAACGGGCCTAACACACTCAAGATCATATATGACAGAGGGCTGTTGGGAACAGTTCACAACTGGTGTGAAGCATTTTCAACTTACCCTCGCACGTATGATCTACTCCATGCATGGACTATATTTTCTGATATCATCGAGAGAGAATGCAGTGTACAGGATTTATTGATTGAGATGGATAGAATACTGAGGCCAAAAGGTTTCGTAATTATTCGTGATAAGCGATCAGTTGTGTTGTCTATAAGGAAGTTCTTGCCAGCATTGCACTGGGATGCAGTGACAAAACCTAATGTGGAGCAAGATTCAGGTACAGGTGAGGATGATGCAGTGTTAATAATTCAGAAGAAGATGTGGCTGACAACCGAGAGCATCCGGGTTTCAGAAAAATGA
Protein sequence

>Msa0027470

MAKGRADGNPRKRLITTVLILFVVGGLVYLYSRNSGSLSSIEYTGKALDVGGGDDIVVPRTIPVCDDRHSELIPCLDRNLIYQTRLKLDLTLMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWRANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHRGADKYIASIANMLNFPNNIINNGGRLRNVFDVGCGVASFGGYLLSSDVLAMSLAPNDVHENQIQFALERGIPAYLGVLGTFRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRILRPGGYFVYSSPEAYAQDEEDRRIWREMSALVGRMCWKVAAKKNQTVIWVKPLTNDCYLKREPGTQPPLCSSDDDPDTVWGVKMKACITRYSDQVHKARGSDLSPWPARLTTPPPRLADFNYSNEMFVKDMDVWQRRVSYYWKLLGNKIKPDTVRNVMDMKANLGSFAAALKDKDVWVMNVVPENGPNTLKIIYDRGLLGTVHNWCEAFSTYPRTYDLLHAWTIFSDIIERECSVQDLLIEMDRILRPKGFVIIRDKRSVVLSIRKFLPALHWDAVTKPNVEQDSGTGEDDAVLIIQKKMWLTTESIRVSEK*