Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028790 | sp|Q9LJ86|LTPG5_ARATH | 45.745 | 188 | 78 | 5 | 1 | 185 | 3 | 169 | 3.22e-39 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028790 | Msa0497190 | 0.806046 | 9.946518e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028790 | MtrunA17_Chr1g0185321 | 86.243 | 189 | 24 | 2 | 1 | 188 | 1 | 188 | 4.06e-92 | 266 |
| Msa0028790 | MtrunA17_Chr5g0395001 | 52.514 | 179 | 68 | 2 | 1 | 179 | 1 | 162 | 4.98e-49 | 156 |
| Msa0028790 | MtrunA17_Chr1g0205201 | 45.402 | 174 | 58 | 1 | 10 | 183 | 10 | 146 | 3.33e-46 | 149 |
| Msa0028790 | MtrunA17_Chr1g0205181 | 42.553 | 141 | 76 | 2 | 1 | 139 | 1 | 138 | 2.55e-29 | 106 |
| Msa0028790 | MtrunA17_Chr7g0260061 | 44.604 | 139 | 63 | 4 | 6 | 137 | 8 | 139 | 1.35e-27 | 102 |
| Msa0028790 | MtrunA17_Chr1g0205191 | 59.036 | 83 | 32 | 1 | 24 | 106 | 24 | 104 | 7.89e-27 | 98.6 |
| Msa0028790 | MtrunA17_Chr3g0118471 | 40.860 | 93 | 52 | 2 | 24 | 113 | 46 | 138 | 1.97e-15 | 71.2 |
| Msa0028790 | MtrunA17_Chr8g0356191 | 29.630 | 189 | 116 | 7 | 1 | 184 | 9 | 185 | 8.38e-15 | 69.3 |
| Msa0028790 | MtrunA17_Chr5g0394991 | 34.659 | 176 | 92 | 9 | 6 | 161 | 8 | 180 | 1.54e-14 | 68.9 |
| Msa0028790 | MtrunA17_Chr8g0378461 | 27.976 | 168 | 113 | 4 | 22 | 188 | 30 | 190 | 1.29e-12 | 63.5 |
| Msa0028790 | MtrunA17_Chr5g0429901 | 32.283 | 127 | 68 | 4 | 28 | 151 | 35 | 146 | 2.35e-12 | 62.8 |
| Msa0028790 | MtrunA17_Chr6g0484651 | 34.653 | 101 | 60 | 2 | 3 | 98 | 13 | 112 | 7.25e-12 | 60.1 |
| Msa0028790 | MtrunA17_Chr1g0201291 | 49.254 | 67 | 31 | 2 | 10 | 75 | 10 | 74 | 1.13e-11 | 58.5 |
| Msa0028790 | MtrunA17_Chr7g0219391 | 34.314 | 102 | 63 | 3 | 6 | 105 | 13 | 112 | 1.62e-11 | 59.3 |
| Msa0028790 | MtrunA17_Chr2g0278981 | 29.839 | 124 | 78 | 3 | 6 | 121 | 7 | 129 | 1.62e-11 | 60.5 |
| Msa0028790 | MtrunA17_Chr3g0121381 | 33.333 | 84 | 54 | 2 | 23 | 105 | 26 | 108 | 2.52e-11 | 59.7 |
| Msa0028790 | MtrunA17_Chr2g0278971 | 33.028 | 109 | 67 | 3 | 7 | 110 | 52 | 159 | 3.35e-11 | 60.1 |
| Msa0028790 | MtrunA17_Chr7g0260071 | 38.462 | 91 | 47 | 3 | 35 | 117 | 41 | 130 | 9.70e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0028790 | AT3G22600.1 | 45.745 | 188 | 78 | 5 | 1 | 185 | 3 | 169 | 3.28e-40 | 134 |
| Msa0028790 | AT1G03103.1 | 46.369 | 179 | 83 | 5 | 7 | 181 | 2 | 171 | 3.48e-39 | 132 |
| Msa0028790 | AT2G48130.2 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT2G48130.6 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT2G48130.4 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT2G48130.5 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT2G48130.1 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT2G48130.3 | 41.989 | 181 | 94 | 4 | 4 | 181 | 5 | 177 | 1.25e-37 | 128 |
| Msa0028790 | AT4G14815.1 | 40.909 | 176 | 67 | 6 | 8 | 182 | 5 | 144 | 1.89e-31 | 112 |
| Msa0028790 | AT2G13820.3 | 32.402 | 179 | 102 | 6 | 8 | 183 | 18 | 180 | 1.48e-17 | 76.6 |
| Msa0028790 | AT2G13820.1 | 32.402 | 179 | 102 | 6 | 8 | 183 | 6 | 168 | 1.72e-17 | 76.3 |
| Msa0028790 | AT3G43720.2 | 32.335 | 167 | 88 | 5 | 28 | 184 | 38 | 189 | 3.47e-16 | 73.2 |
| Msa0028790 | AT3G43720.1 | 31.361 | 169 | 89 | 5 | 28 | 184 | 38 | 191 | 1.03e-15 | 72.0 |
| Msa0028790 | AT1G55260.1 | 27.160 | 162 | 112 | 4 | 23 | 183 | 71 | 227 | 1.06e-14 | 70.1 |
| Msa0028790 | AT2G13820.2 | 37.374 | 99 | 58 | 3 | 10 | 105 | 8 | 105 | 1.62e-14 | 67.4 |
| Msa0028790 | AT1G55260.2 | 27.160 | 162 | 109 | 4 | 23 | 183 | 71 | 224 | 2.50e-14 | 68.9 |
| Msa0028790 | AT2G44290.1 | 26.866 | 201 | 122 | 7 | 1 | 184 | 9 | 201 | 6.56e-14 | 67.4 |
| Msa0028790 | AT5G09370.3 | 35.714 | 112 | 67 | 3 | 23 | 132 | 23 | 131 | 1.44e-13 | 65.5 |
| Msa0028790 | AT2G44300.1 | 30.000 | 180 | 103 | 9 | 21 | 184 | 28 | 200 | 3.11e-13 | 65.9 |
| Msa0028790 | AT4G08670.1 | 35.465 | 172 | 81 | 9 | 26 | 186 | 46 | 198 | 7.72e-13 | 64.7 |
| Msa0028790 | AT5G09370.2 | 38.372 | 86 | 49 | 2 | 23 | 106 | 23 | 106 | 1.81e-12 | 62.0 |
| Msa0028790 | AT5G09370.1 | 38.372 | 86 | 49 | 2 | 23 | 106 | 23 | 106 | 2.04e-12 | 62.4 |
| Msa0028790 | AT1G05450.2 | 34.884 | 172 | 96 | 7 | 30 | 188 | 36 | 204 | 2.54e-12 | 63.2 |
| Msa0028790 | AT5G64080.1 | 30.380 | 158 | 86 | 5 | 28 | 183 | 43 | 178 | 1.32e-11 | 60.8 |
| Msa0028790 | AT5G64080.2 | 31.056 | 161 | 77 | 7 | 28 | 183 | 43 | 174 | 1.92e-11 | 60.5 |
Find 48 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTAGTTCCAAGATAAA+AGG | 0.236232 | 1_1:+53844738 | Msa0028790:five_prime_UTR |
| AAAGGAGTAATGGCATTTAA+AGG | 0.261095 | 1_1:+53844756 | Msa0028790:exon |
| AATGGTGGTGGTTCAACTTT+TGG | 0.266499 | 1_1:+53844981 | Msa0028790:CDS |
| GTCTCTCCCTTCTGCTTGTA+AGG | 0.299840 | 1_1:+53845031 | Msa0028790:CDS |
| TGTCTATGCTCCCTCCTTAA+TGG | 0.316118 | 1_1:+53844963 | Msa0028790:CDS |
| TCAAGTTCAACTTCTTCAAT+TGG | 0.356147 | 1_1:+53845226 | Msa0028790:CDS |
| CCCTTGTCTAAACTACATAA+TGG | 0.358396 | 1_1:+53844872 | Msa0028790:CDS |
| AAGTTGAACCACCACCATTA+AGG | 0.366872 | 1_1:-53844977 | None:intergenic |
| GAAGGTGTTATTGTGCCTTC+AGG | 0.369459 | 1_1:-53845277 | None:intergenic |
| GACGAGCCAGCGTCTGTTGA+TGG | 0.377260 | 1_1:-53845472 | None:intergenic |
| TTACCTTTGCACTGGCTAAC+CGG | 0.388855 | 1_1:-53845065 | None:intergenic |
| ATTGAAGAAGTTGAACTTGA+AGG | 0.407603 | 1_1:-53845223 | None:intergenic |
| AAGGAGTAATGGCATTTAAA+GGG | 0.456484 | 1_1:+53844757 | Msa0028790:exon |
| TCAGACTTTCCCTCATCCTC+AGG | 0.458230 | 1_1:+53845304 | Msa0028790:CDS |
| TGCTCCCTCCTTAATGGTGG+TGG | 0.462126 | 1_1:+53844969 | Msa0028790:CDS |
| TCTTCAATTGGTTCACCTGT+TGG | 0.462385 | 1_1:+53845238 | Msa0028790:CDS |
| CCTTGTCTAAACTACATAAT+GGG | 0.473365 | 1_1:+53844873 | Msa0028790:CDS |
| GATTCAGTTGGAGCACCAAC+AGG | 0.475748 | 1_1:-53845253 | None:intergenic |
| ACTCAAAATGAAGCTCAATC+AGG | 0.480107 | 1_1:+53844822 | Msa0028790:CDS |
| GTGCCTTCAGGTGATTCAGT+TGG | 0.485931 | 1_1:-53845265 | None:intergenic |
| ATAGACACTGTGGAGAAGAT+TGG | 0.486063 | 1_1:-53844947 | None:intergenic |
| ACAGACGCTGGCTCGTCTGA+TGG | 0.500132 | 1_1:+53845478 | Msa0028790:CDS |
| AGTATATATACCTGAGGATG+AGG | 0.503241 | 1_1:-53845314 | None:intergenic |
| ATTCAAACTTACCTTTGCAC+TGG | 0.504688 | 1_1:-53845073 | None:intergenic |
| TTCCAAGATAAAAGGAGTAA+TGG | 0.511922 | 1_1:+53844746 | Msa0028790:exon |
| GTATATCCTATGTCTAGTTA+TGG | 0.517596 | 1_1:+53844779 | Msa0028790:CDS |
| CCCATTATGTAGTTTAGACA+AGG | 0.536489 | 1_1:-53844873 | None:intergenic |
| GTATACATAAAATCAAAACT+TGG | 0.540554 | 1_1:-53845566 | None:intergenic |
| ACGAGCCAGCGTCTGTTGAT+GGG | 0.545167 | 1_1:-53845471 | None:intergenic |
| GTTTGAACCTTACAAGCAGA+AGG | 0.551664 | 1_1:-53845038 | None:intergenic |
| TTGTAAGGTTCAAACTCCAC+CGG | 0.580289 | 1_1:+53845046 | Msa0028790:CDS |
| GTTGAACTTGAAGGAGATGT+TGG | 0.580975 | 1_1:-53845214 | None:intergenic |
| TGTGAGCAACATGAAGATGA+TGG | 0.581104 | 1_1:-53844909 | None:intergenic |
| CTACGACCATAACTAGACAT+AGG | 0.586523 | 1_1:-53844785 | None:intergenic |
| CTATGCTCCCTCCTTAATGG+TGG | 0.612240 | 1_1:+53844966 | Msa0028790:CDS |
| CCTTTGCACTGGCTAACCGG+TGG | 0.616670 | 1_1:-53845062 | None:intergenic |
| TTGAACCACCACCATTAAGG+AGG | 0.620999 | 1_1:-53844974 | None:intergenic |
| GAGGGAAAGTCTGAAGCAGA+AGG | 0.627664 | 1_1:-53845295 | None:intergenic |
| ATGTCTAGTTATGGTCGTAG+TGG | 0.633614 | 1_1:+53844788 | Msa0028790:CDS |
| AGCGTCCCATCAACAGACGC+TGG | 0.637645 | 1_1:+53845466 | Msa0028790:CDS |
| CCACCGGTTAGCCAGTGCAA+AGG | 0.638372 | 1_1:+53845062 | Msa0028790:CDS |
| GTATATATACCTGAGGATGA+GGG | 0.643487 | 1_1:-53845313 | None:intergenic |
| CCATTATGTAGTTTAGACAA+GGG | 0.644176 | 1_1:-53844872 | None:intergenic |
| TTTGAACCTTACAAGCAGAA+GGG | 0.651803 | 1_1:-53845037 | None:intergenic |
| TGAACCACCACCATTAAGGA+GGG | 0.659706 | 1_1:-53844973 | None:intergenic |
| GCTCCAACTGAATCACCTGA+AGG | 0.660479 | 1_1:+53845262 | Msa0028790:CDS |
| CAAGAAGGGAAAGAACAAAG+TGG | 0.672272 | 1_1:-53845522 | None:intergenic |
| AGGAGGGAGCATAGACACTG+TGG | 0.710687 | 1_1:-53844957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAGTTCCAAGATAAA+AGG | + | chr1_1:53844738-53844757 | Msa0028790:five_prime_UTR | 20.0% |
| !! | TATTTACATGGTATGAATTT+AGG | + | chr1_1:53845181-53845200 | Msa0028790:intron | 20.0% |
| !! | TCTATTACAAATGATTACTT+GGG | - | chr1_1:53845373-53845392 | None:intergenic | 20.0% |
| !!! | TTCATTTTGAGTACACATAT+TGG | - | chr1_1:53844814-53844833 | None:intergenic | 25.0% |
| ! | ATACCAATGACTTATTTACA+TGG | + | chr1_1:53845169-53845188 | Msa0028790:intron | 25.0% |
| ! | ATACCATGTAAATAAGTCAT+TGG | - | chr1_1:53845175-53845194 | None:intergenic | 25.0% |
| ! | AGTATTAGTATATATACCTG+AGG | - | chr1_1:53845323-53845342 | None:intergenic | 25.0% |
| ! | GTCTATTACAAATGATTACT+TGG | - | chr1_1:53845374-53845393 | None:intergenic | 25.0% |
| !!! | TTTATTGATTCACATGGTTT+TGG | + | chr1_1:53845419-53845438 | Msa0028790:intron | 25.0% |
| TTCCAAGATAAAAGGAGTAA+TGG | + | chr1_1:53844746-53844765 | Msa0028790:exon | 30.0% | |
| AAAGGAGTAATGGCATTTAA+AGG | + | chr1_1:53844756-53844775 | Msa0028790:exon | 30.0% | |
| AAGGAGTAATGGCATTTAAA+GGG | + | chr1_1:53844757-53844776 | Msa0028790:exon | 30.0% | |
| GTATATCCTATGTCTAGTTA+TGG | + | chr1_1:53844779-53844798 | Msa0028790:CDS | 30.0% | |
| CCATTATGTAGTTTAGACAA+GGG | - | chr1_1:53844875-53844894 | None:intergenic | 30.0% | |
| CCTTGTCTAAACTACATAAT+GGG | + | chr1_1:53844873-53844892 | Msa0028790:CDS | 30.0% | |
| TTACATGGTATGAATTTAGG+TGG | + | chr1_1:53845184-53845203 | Msa0028790:intron | 30.0% | |
| ATTGAAGAAGTTGAACTTGA+AGG | - | chr1_1:53845226-53845245 | None:intergenic | 30.0% | |
| TCAAGTTCAACTTCTTCAAT+TGG | + | chr1_1:53845226-53845245 | Msa0028790:CDS | 30.0% | |
| !! | ATAGCGTTTATTGATTCACA+TGG | + | chr1_1:53845413-53845432 | Msa0028790:intron | 30.0% |
| AAAAAACACAATGGCAAGAA+GGG | - | chr1_1:53845539-53845558 | None:intergenic | 30.0% | |
| ! | TGCCATTACTCCTTTTATCT+TGG | - | chr1_1:53844751-53844770 | None:intergenic | 35.0% |
| ACTCAAAATGAAGCTCAATC+AGG | + | chr1_1:53844822-53844841 | Msa0028790:CDS | 35.0% | |
| CCCTTGTCTAAACTACATAA+TGG | + | chr1_1:53844872-53844891 | Msa0028790:CDS | 35.0% | |
| CCCATTATGTAGTTTAGACA+AGG | - | chr1_1:53844876-53844895 | None:intergenic | 35.0% | |
| TTTGAACCTTACAAGCAGAA+GGG | - | chr1_1:53845040-53845059 | None:intergenic | 35.0% | |
| ATTCAAACTTACCTTTGCAC+TGG | - | chr1_1:53845076-53845095 | None:intergenic | 35.0% | |
| GTATATATACCTGAGGATGA+GGG | - | chr1_1:53845316-53845335 | None:intergenic | 35.0% | |
| AGTATATATACCTGAGGATG+AGG | - | chr1_1:53845317-53845336 | None:intergenic | 35.0% | |
| CAAAAAACACAATGGCAAGA+AGG | - | chr1_1:53845540-53845559 | None:intergenic | 35.0% | |
| GGTGACAACAAAAAACACAA+TGG | - | chr1_1:53845548-53845567 | None:intergenic | 35.0% | |
| CTACGACCATAACTAGACAT+AGG | - | chr1_1:53844788-53844807 | None:intergenic | 40.0% | |
| ATGTCTAGTTATGGTCGTAG+TGG | + | chr1_1:53844788-53844807 | Msa0028790:CDS | 40.0% | |
| TGTGAGCAACATGAAGATGA+TGG | - | chr1_1:53844912-53844931 | None:intergenic | 40.0% | |
| ATAGACACTGTGGAGAAGAT+TGG | - | chr1_1:53844950-53844969 | None:intergenic | 40.0% | |
| AAGTTGAACCACCACCATTA+AGG | - | chr1_1:53844980-53844999 | None:intergenic | 40.0% | |
| !!! | AATGGTGGTGGTTCAACTTT+TGG | + | chr1_1:53844981-53845000 | Msa0028790:CDS | 40.0% |
| GTTTGAACCTTACAAGCAGA+AGG | - | chr1_1:53845041-53845060 | None:intergenic | 40.0% | |
| TTGTAAGGTTCAAACTCCAC+CGG | + | chr1_1:53845046-53845065 | Msa0028790:CDS | 40.0% | |
| CCAATTATTACAGACGCTTC+AGG | - | chr1_1:53845136-53845155 | None:intergenic | 40.0% | |
| ! | CCTGAAGCGTCTGTAATAAT+TGG | + | chr1_1:53845133-53845152 | Msa0028790:intron | 40.0% |
| GTTGAACTTGAAGGAGATGT+TGG | - | chr1_1:53845217-53845236 | None:intergenic | 40.0% | |
| ! | TCTTCAATTGGTTCACCTGT+TGG | + | chr1_1:53845238-53845257 | Msa0028790:CDS | 40.0% |
| !!! | ACATGGTTTTGGTGAATTGC+AGG | + | chr1_1:53845430-53845449 | Msa0028790:intron | 40.0% |
| CAAGAAGGGAAAGAACAAAG+TGG | - | chr1_1:53845525-53845544 | None:intergenic | 40.0% | |
| TGTCTATGCTCCCTCCTTAA+TGG | + | chr1_1:53844963-53844982 | Msa0028790:CDS | 45.0% | |
| TGAACCACCACCATTAAGGA+GGG | - | chr1_1:53844976-53844995 | None:intergenic | 45.0% | |
| TTGAACCACCACCATTAAGG+AGG | - | chr1_1:53844977-53844996 | None:intergenic | 45.0% | |
| !! | TTACCTTTGCACTGGCTAAC+CGG | - | chr1_1:53845068-53845087 | None:intergenic | 45.0% |
| !! | TTACAGACGCTTCAGGTTGA+AGG | - | chr1_1:53845129-53845148 | None:intergenic | 45.0% |
| !! | GAAGGTGTTATTGTGCCTTC+AGG | - | chr1_1:53845280-53845299 | None:intergenic | 45.0% |
| ! | TTTTGGTGAATTGCAGGTGC+AGG | + | chr1_1:53845436-53845455 | Msa0028790:intron | 45.0% |
| CTATGCTCCCTCCTTAATGG+TGG | + | chr1_1:53844966-53844985 | Msa0028790:CDS | 50.0% | |
| GTCTCTCCCTTCTGCTTGTA+AGG | + | chr1_1:53845031-53845050 | Msa0028790:CDS | 50.0% | |
| ! | GATTCAGTTGGAGCACCAAC+AGG | - | chr1_1:53845256-53845275 | None:intergenic | 50.0% |
| GCTCCAACTGAATCACCTGA+AGG | + | chr1_1:53845262-53845281 | Msa0028790:CDS | 50.0% | |
| GTGCCTTCAGGTGATTCAGT+TGG | - | chr1_1:53845268-53845287 | None:intergenic | 50.0% | |
| ! | GAGGGAAAGTCTGAAGCAGA+AGG | - | chr1_1:53845298-53845317 | None:intergenic | 50.0% |
| TCAGACTTTCCCTCATCCTC+AGG | + | chr1_1:53845304-53845323 | Msa0028790:CDS | 50.0% | |
| ! | AGGAGGGAGCATAGACACTG+TGG | - | chr1_1:53844960-53844979 | None:intergenic | 55.0% |
| TGCTCCCTCCTTAATGGTGG+TGG | + | chr1_1:53844969-53844988 | Msa0028790:CDS | 55.0% | |
| ACGAGCCAGCGTCTGTTGAT+GGG | - | chr1_1:53845474-53845493 | None:intergenic | 55.0% | |
| !! | CCTTTGCACTGGCTAACCGG+TGG | - | chr1_1:53845065-53845084 | None:intergenic | 60.0% |
| ! | CCACCGGTTAGCCAGTGCAA+AGG | + | chr1_1:53845062-53845081 | Msa0028790:CDS | 60.0% |
| AGCGTCCCATCAACAGACGC+TGG | + | chr1_1:53845466-53845485 | Msa0028790:CDS | 60.0% | |
| GACGAGCCAGCGTCTGTTGA+TGG | - | chr1_1:53845475-53845494 | None:intergenic | 60.0% | |
| !! | ACAGACGCTGGCTCGTCTGA+TGG | + | chr1_1:53845478-53845497 | Msa0028790:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 53844715 | 53845576 | 53844715 | ID=Msa0028790;Name=Msa0028790 |
| chr1_1 | mRNA | 53844715 | 53845576 | 53844715 | ID=Msa0028790-mRNA-1;Parent=Msa0028790;Name=Msa0028790-mRNA-1;_AED=0.18;_eAED=0.18;_QI=50|1|0.66|1|1|1|3|0|188 |
| chr1_1 | exon | 53844715 | 53845083 | 53844715 | ID=Msa0028790-mRNA-1:exon:15908;Parent=Msa0028790-mRNA-1 |
| chr1_1 | exon | 53845203 | 53845325 | 53845203 | ID=Msa0028790-mRNA-1:exon:15909;Parent=Msa0028790-mRNA-1 |
| chr1_1 | exon | 53845452 | 53845576 | 53845452 | ID=Msa0028790-mRNA-1:exon:15910;Parent=Msa0028790-mRNA-1 |
| chr1_1 | five_prime_UTR | 53844715 | 53844764 | 53844715 | ID=Msa0028790-mRNA-1:five_prime_utr;Parent=Msa0028790-mRNA-1 |
| chr1_1 | CDS | 53844765 | 53845083 | 53844765 | ID=Msa0028790-mRNA-1:cds;Parent=Msa0028790-mRNA-1 |
| chr1_1 | CDS | 53845203 | 53845325 | 53845203 | ID=Msa0028790-mRNA-1:cds;Parent=Msa0028790-mRNA-1 |
| chr1_1 | CDS | 53845452 | 53845576 | 53845452 | ID=Msa0028790-mRNA-1:cds;Parent=Msa0028790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
