Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033210 | XP_039685300.1 | 97.455 | 550 | 14 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033210 | sp|Q9ASR4|BCAL2_ARATH | 80.146 | 549 | 109 | 0 | 3 | 551 | 1 | 549 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033210 | I3S2Y0 | 97.455 | 550 | 14 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1103 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033210 | Msa0079870 | 0.888936 | 3.792190e-73 | -8.615850e-47 |
| Msa0033210 | Msa0165630 | 0.933009 | 3.598237e-95 | -8.615850e-47 |
| Msa0033210 | Msa0618360 | -0.800546 | 1.369859e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033210 | MtrunA17_Chr1g0191561 | 97.455 | 550 | 14 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1103 |
| Msa0033210 | MtrunA17_Chr1g0192181 | 88.441 | 372 | 43 | 0 | 3 | 374 | 1 | 372 | 0.0 | 679 |
| Msa0033210 | MtrunA17_Chr1g0192191 | 81.043 | 211 | 10 | 2 | 374 | 554 | 6 | 216 | 5.79e-113 | 334 |
| Msa0033210 | MtrunA17_Chr1g0157721 | 26.866 | 268 | 186 | 6 | 273 | 533 | 97 | 361 | 5.30e-19 | 89.4 |
| Msa0033210 | MtrunA17_Chr5g0400811 | 26.950 | 282 | 171 | 13 | 283 | 541 | 121 | 390 | 1.24e-15 | 79.3 |
| Msa0033210 | MtrunA17_Chr1g0191551 | 93.939 | 33 | 2 | 0 | 513 | 545 | 14 | 46 | 9.57e-15 | 69.7 |
| Msa0033210 | MtrunA17_Chr2g0316981 | 22.814 | 263 | 185 | 7 | 281 | 534 | 70 | 323 | 5.89e-12 | 67.4 |
| Msa0033210 | MtrunA17_Chr4g0049231 | 26.394 | 269 | 167 | 12 | 269 | 516 | 56 | 314 | 9.44e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0033210 | AT5G27410.2 | 80.146 | 549 | 109 | 0 | 3 | 551 | 378 | 926 | 0.0 | 925 |
| Msa0033210 | AT5G27410.1 | 80.146 | 549 | 109 | 0 | 3 | 551 | 1 | 549 | 0.0 | 920 |
| Msa0033210 | AT3G05190.2 | 80.545 | 550 | 107 | 0 | 2 | 551 | 3 | 552 | 0.0 | 890 |
| Msa0033210 | AT3G05190.3 | 80.545 | 550 | 107 | 0 | 2 | 551 | 3 | 552 | 0.0 | 890 |
| Msa0033210 | AT3G05190.1 | 80.545 | 550 | 107 | 0 | 2 | 551 | 3 | 552 | 0.0 | 890 |
| Msa0033210 | AT5G27410.3 | 80.361 | 499 | 98 | 0 | 3 | 501 | 1 | 499 | 0.0 | 837 |
| Msa0033210 | AT5G27410.4 | 81.279 | 438 | 82 | 0 | 114 | 551 | 24 | 461 | 0.0 | 738 |
| Msa0033210 | AT3G49680.2 | 26.644 | 289 | 180 | 12 | 276 | 540 | 115 | 395 | 1.55e-16 | 82.4 |
| Msa0033210 | AT3G49680.1 | 26.644 | 289 | 180 | 12 | 276 | 540 | 117 | 397 | 1.97e-16 | 82.0 |
| Msa0033210 | AT5G65780.1 | 25.887 | 282 | 175 | 12 | 283 | 541 | 127 | 397 | 4.20e-14 | 75.1 |
| Msa0033210 | AT5G57850.2 | 26.154 | 260 | 179 | 8 | 281 | 533 | 22 | 275 | 2.65e-13 | 71.2 |
| Msa0033210 | AT5G57850.1 | 26.154 | 260 | 179 | 8 | 281 | 533 | 99 | 352 | 3.97e-13 | 71.6 |
| Msa0033210 | AT1G50110.1 | 26.718 | 262 | 166 | 10 | 263 | 506 | 46 | 299 | 4.90e-12 | 68.2 |
| Msa0033210 | AT1G50110.2 | 26.718 | 262 | 166 | 10 | 263 | 506 | 11 | 264 | 5.10e-12 | 67.8 |
Find 159 sgRNAs with CRISPR-Local
Find 508 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACATTCCATTCCTAATA+AGG | 0.135928 | 1_1:-60561787 | None:intergenic |
| CGGGAACTAATAATTCTATT+TGG | 0.137161 | 1_1:-60565844 | None:intergenic |
| CTGTATGGATGCACATTAAT+TGG | 0.231114 | 1_1:+60562381 | Msa0033210:CDS |
| CACAAGCCATCTATTGGTTT+TGG | 0.244720 | 1_1:-60560446 | None:intergenic |
| ACTTCATTTACTCTGCCTTT+TGG | 0.291907 | 1_1:+60565819 | Msa0033210:three_prime_UTR |
| TTAATTTGCAGGCTACTTTA+CGG | 0.308689 | 1_1:+60560205 | Msa0033210:intron |
| ACCAATAACTAGAAAATTGC+AGG | 0.309549 | 1_1:+60565531 | Msa0033210:CDS |
| CATGCTGATTACTGTCTTCC+TGG | 0.310626 | 1_1:+60564536 | Msa0033210:CDS |
| AAGAAATCCTCTTGACATAT+TGG | 0.317259 | 1_1:+60559463 | Msa0033210:CDS |
| TAATTTGCAGGCTACTTTAC+GGG | 0.327850 | 1_1:+60560206 | Msa0033210:intron |
| TCCAAGGTGGCGACTCGGTT+TGG | 0.330233 | 1_1:+60561141 | Msa0033210:CDS |
| AATGACGTAATTTACGGTTC+TGG | 0.330852 | 1_1:+60558451 | Msa0033210:CDS |
| ACAAAGGGTGCTTGGTTTGC+CGG | 0.332728 | 1_1:+60559403 | Msa0033210:CDS |
| CATATATCTCACCAGGATAT+CGG | 0.333449 | 1_1:+60561507 | Msa0033210:intron |
| AAACATTCCATTCCTAATAA+GGG | 0.341277 | 1_1:-60561786 | None:intergenic |
| CCACGCTCATTATCATAAAC+AGG | 0.350229 | 1_1:-60563073 | None:intergenic |
| ACGGGGTCTCTGTGATGATT+TGG | 0.351093 | 1_1:+60560224 | Msa0033210:CDS |
| CCAAGGTGGCGACTCGGTTT+GGG | 0.356133 | 1_1:+60561142 | Msa0033210:CDS |
| TCTCATTTCCTCCGTGTTAG+TGG | 0.357250 | 1_1:+60558278 | Msa0033210:CDS |
| ATCGTTCTTTGAGTTGGGTT+TGG | 0.359691 | 1_1:+60559622 | Msa0033210:CDS |
| GGGAACTAATAATTCTATTT+GGG | 0.363390 | 1_1:-60565843 | None:intergenic |
| ACAGGAATCTGATGGAAATA+AGG | 0.365836 | 1_1:+60558423 | Msa0033210:intron |
| CCTCCATCGTTCTTTGAGTT+GGG | 0.367704 | 1_1:+60559617 | Msa0033210:CDS |
| GACTTGGAAATAAGTGAAAA+TGG | 0.368268 | 1_1:+60565729 | Msa0033210:three_prime_UTR |
| TCAACTGTGCAGTTGGGACT+TGG | 0.368521 | 1_1:+60565713 | Msa0033210:intron |
| GCCTCCATCGTTCTTTGAGT+TGG | 0.369307 | 1_1:+60559616 | Msa0033210:CDS |
| TGGGCCCCTTGGTGGTATAA+TGG | 0.370653 | 1_1:+60560467 | Msa0033210:CDS |
| GTTGTTAATGACGTAATTTA+CGG | 0.371729 | 1_1:+60558445 | Msa0033210:CDS |
| AATTGCATATATAAACTAAT+CGG | 0.373666 | 1_1:-60565864 | None:intergenic |
| ACTCTATACCTGAGCATTGC+TGG | 0.376356 | 1_1:-60560261 | None:intergenic |
| GGGGCCCACAAGCCATCTAT+TGG | 0.390878 | 1_1:-60560452 | None:intergenic |
| TTGATTATAATTTATTATAG+AGG | 0.393535 | 1_1:+60558089 | Msa0033210:five_prime_UTR |
| AGACTTGTGCTAAGAGATCT+TGG | 0.399975 | 1_1:-60558200 | None:intergenic |
| ATCGGATTCAGCTAAAGCTT+TGG | 0.411539 | 1_1:+60561525 | Msa0033210:CDS |
| CTGAGCATTGCTGGTTGAAA+AGG | 0.420002 | 1_1:-60560252 | None:intergenic |
| AGCGAGAAATAGTACCATAT+TGG | 0.420195 | 1_1:-60558333 | None:intergenic |
| TTCAAAACCCTTATTAGGAA+TGG | 0.428456 | 1_1:+60561779 | Msa0033210:CDS |
| AGATGAAGTACTCTCCAATA+TGG | 0.435190 | 1_1:+60558319 | Msa0033210:CDS |
| TTTGGTTTGGTGCAGGTTGA+AGG | 0.436320 | 1_1:+60564025 | Msa0033210:intron |
| CAACAAATCATAGAGAGAAA+AGG | 0.436715 | 1_1:-60560828 | None:intergenic |
| TTCCAGGTAGTGAAGGTTGA+TGG | 0.441769 | 1_1:+60565481 | Msa0033210:intron |
| ACAACGCACTACTGTATACT+TGG | 0.442392 | 1_1:-60558019 | None:intergenic |
| CCTTGGCGAGTATGTTATTG+AGG | 0.442460 | 1_1:-60563726 | None:intergenic |
| TATAATGAACTCTGCGAGAA+TGG | 0.442573 | 1_1:+60559662 | Msa0033210:CDS |
| TACAGAAAGCTACCTAGATA+TGG | 0.442739 | 1_1:+60565931 | Msa0033210:three_prime_UTR |
| AACAAATCATAGAGAGAAAA+GGG | 0.447539 | 1_1:-60560827 | None:intergenic |
| TTTGCAGGAACTGGAAGGTC+GGG | 0.447939 | 1_1:-60560932 | None:intergenic |
| AAACTTGTCAGTTGGGAAGC+AGG | 0.449700 | 1_1:+60560422 | Msa0033210:intron |
| ACATACGATGTTAGTTGCAT+TGG | 0.452194 | 1_1:-60564107 | None:intergenic |
| TTCTCTAACACGAGGAAAGA+AGG | 0.453409 | 1_1:+60561829 | Msa0033210:CDS |
| TACCTCTTTACAACATGCTT+CGG | 0.457436 | 1_1:+60560861 | Msa0033210:CDS |
| CAGATAAAGATACCATATCT+AGG | 0.459654 | 1_1:-60565943 | None:intergenic |
| GCAGGTCCAAAACCAATAGA+TGG | 0.461121 | 1_1:+60560440 | Msa0033210:CDS |
| AGTTCTGCAGCATCAATAAC+AGG | 0.464173 | 1_1:-60559695 | None:intergenic |
| TCATAGAGAGAAAAGGGAAA+TGG | 0.470885 | 1_1:-60560821 | None:intergenic |
| GAAGCAAAGGAGAGCTCAGA+AGG | 0.471120 | 1_1:-60560907 | None:intergenic |
| GCCTTGCAGGTATGGACGAC+AGG | 0.474754 | 1_1:+60565291 | Msa0033210:intron |
| TAATTCTATTTGGGACCAAA+AGG | 0.479919 | 1_1:-60565834 | None:intergenic |
| TTCCATAGCTTAGGCGAAGA+TGG | 0.480985 | 1_1:+60558148 | Msa0033210:exon |
| ATAATTTATTATAGAGGCGT+TGG | 0.483621 | 1_1:+60558095 | Msa0033210:five_prime_UTR |
| ATATCAAAACAAAGGGTGCT+TGG | 0.484483 | 1_1:+60559395 | Msa0033210:CDS |
| GTGTAGTTCATAGTTAAGAA+AGG | 0.486304 | 1_1:+60564497 | Msa0033210:intron |
| ATTGCATATATAAACTAATC+GGG | 0.487695 | 1_1:-60565863 | None:intergenic |
| AGGTGGCGACTCGGTTTGGG+AGG | 0.488056 | 1_1:+60561145 | Msa0033210:CDS |
| AACTTGAGGAACATCTAGAT+AGG | 0.488737 | 1_1:+60561198 | Msa0033210:CDS |
| CTCCATCTTCGCCTAAGCTA+TGG | 0.489466 | 1_1:-60558150 | None:intergenic |
| GTTCTTTGAGTTGGGTTTGG+CGG | 0.493891 | 1_1:+60559625 | Msa0033210:CDS |
| CTGCGGTATGCACTTCTGAC+AGG | 0.497577 | 1_1:-60564774 | None:intergenic |
| AAGGTTGATGGGCGCACAAT+TGG | 0.498142 | 1_1:+60565493 | Msa0033210:CDS |
| TGGAAATAAGTGAAAATGGC+TGG | 0.499119 | 1_1:+60565733 | Msa0033210:three_prime_UTR |
| TTGATGATCTAGGCTAAGAT+TGG | 0.502749 | 1_1:-60565769 | None:intergenic |
| CCCAAACCGAGTCGCCACCT+TGG | 0.505664 | 1_1:-60561142 | None:intergenic |
| TAGATGGCTTGTGGGCCCCT+TGG | 0.507067 | 1_1:+60560456 | Msa0033210:CDS |
| AAAATTCGATTCCATAGCTT+AGG | 0.508004 | 1_1:+60558139 | Msa0033210:five_prime_UTR |
| GTGTTAGAGAAAGTCGGATG+TGG | 0.515874 | 1_1:-60561817 | None:intergenic |
| AGCCCAGCATTGAATCTGTA+TGG | 0.517073 | 1_1:+60562366 | Msa0033210:CDS |
| ATCCATACAGATTCAATGCT+GGG | 0.517729 | 1_1:-60562368 | None:intergenic |
| ATGGCTTGTGGGCCCCTTGG+TGG | 0.519292 | 1_1:+60560459 | Msa0033210:CDS |
| ATTTGCAGGAACTGGAAGGT+CGG | 0.519588 | 1_1:-60560933 | None:intergenic |
| AAAACCAATAGATGGCTTGT+GGG | 0.519625 | 1_1:+60560448 | Msa0033210:CDS |
| AATGGTGTACATAAATCTAC+TGG | 0.525316 | 1_1:+60560485 | Msa0033210:CDS |
| AGCTTTCTGTATTAGACCGC+AGG | 0.526478 | 1_1:-60565919 | None:intergenic |
| CATCCATACAGATTCAATGC+TGG | 0.531657 | 1_1:-60562369 | None:intergenic |
| GAGAGTACTTCATCTCTGTA+AGG | 0.532433 | 1_1:-60558311 | None:intergenic |
| GCAATAATGCTTGACAAGGA+TGG | 0.532867 | 1_1:+60564070 | Msa0033210:CDS |
| TTGCCACTTCCAGGTAGTGA+AGG | 0.536162 | 1_1:+60565474 | Msa0033210:intron |
| GTGATTGTACCAAGCTCAAA+GGG | 0.536224 | 1_1:-60566028 | None:intergenic |
| TTGCAGGAACTGGAAGGTCG+GGG | 0.536916 | 1_1:-60560931 | None:intergenic |
| CCTCCAGCCGTCCTTTGACA+AGG | 0.539720 | 1_1:+60559589 | Msa0033210:intron |
| TCCAGGTAGTGAAGGTTGAT+GGG | 0.540950 | 1_1:+60565482 | Msa0033210:intron |
| GAACTACCTCAAAACTTGAA+AGG | 0.541038 | 1_1:+60565597 | Msa0033210:exon |
| ACAATTGGTGATGGAAAAGT+AGG | 0.541477 | 1_1:+60565508 | Msa0033210:CDS |
| ATTTAAGGTCATGGATCTTG+TGG | 0.543156 | 1_1:+60564714 | Msa0033210:intron |
| AGCTTAGGCGAAGATGGAGG+TGG | 0.543382 | 1_1:+60558154 | Msa0033210:exon |
| GTGTTTGATTCAGTTGTCCA+AGG | 0.543392 | 1_1:+60561125 | Msa0033210:CDS |
| GTATGGACGACAGGAACAAT+GGG | 0.546128 | 1_1:+60565300 | Msa0033210:CDS |
| GGTGGCGACTCGGTTTGGGA+GGG | 0.546460 | 1_1:+60561146 | Msa0033210:CDS |
| CAAAACCAATAGATGGCTTG+TGG | 0.549700 | 1_1:+60560447 | Msa0033210:CDS |
| CGCCGAAGCATGTTGTAAAG+AGG | 0.551565 | 1_1:-60560863 | None:intergenic |
| TCAGCATATATCAAAACAAA+GGG | 0.552474 | 1_1:+60559388 | Msa0033210:intron |
| TGTGATTGTACCAAGCTCAA+AGG | 0.554959 | 1_1:-60566029 | None:intergenic |
| CAGCATGTGGCGTCAAAACA+CGG | 0.555121 | 1_1:-60564520 | None:intergenic |
| GGTCATGGATCTTGTGGTGA+AGG | 0.557825 | 1_1:+60564720 | Msa0033210:intron |
| TGCAGGAACTGGAAGGTCGG+GGG | 0.568134 | 1_1:-60560930 | None:intergenic |
| GGTATGGACGACAGGAACAA+TGG | 0.569033 | 1_1:+60565299 | Msa0033210:intron |
| AATTTGCAGGCTACTTTACG+GGG | 0.569661 | 1_1:+60560207 | Msa0033210:intron |
| ACAGTTGCTCGAGTAATGCC+AGG | 0.572507 | 1_1:-60564554 | None:intergenic |
| AACAATGGGAGAACTAAGCC+CGG | 0.575191 | 1_1:+60565314 | Msa0033210:CDS |
| AGTTGTCCAAGGTGGCGACT+CGG | 0.579530 | 1_1:+60561136 | Msa0033210:CDS |
| CGATGCAATAATGCTTGACA+AGG | 0.579891 | 1_1:+60564066 | Msa0033210:CDS |
| TTCAGCATATATCAAAACAA+AGG | 0.584471 | 1_1:+60559387 | Msa0033210:intron |
| CACGCTCATTATCATAAACA+GGG | 0.584683 | 1_1:-60563072 | None:intergenic |
| TGGAGGCACAACCTTGTCAA+AGG | 0.591986 | 1_1:-60559600 | None:intergenic |
| TTGTAACTGCCACCACGCGC+AGG | 0.592997 | 1_1:+60563104 | Msa0033210:CDS |
| AGTGTTACCAATATGTCAAG+AGG | 0.593316 | 1_1:-60559470 | None:intergenic |
| TTTCATTTGCAGGAACTGGA+AGG | 0.597192 | 1_1:-60560937 | None:intergenic |
| ATTACGCAGTGCTTGCCGAA+TGG | 0.597800 | 1_1:+60563044 | Msa0033210:intron |
| GCAGGAACTGGAAGGTCGGG+GGG | 0.598206 | 1_1:-60560929 | None:intergenic |
| GAGAATAGAGAGGCTCATCA+AGG | 0.598498 | 1_1:-60558259 | None:intergenic |
| TGGCGAGTATGTTATTGAGG+AGG | 0.600825 | 1_1:-60563723 | None:intergenic |
| GGCACAACCTTGTCAAAGGA+CGG | 0.603901 | 1_1:-60559596 | None:intergenic |
| TTCCTCGTGTTAGAGAAAGT+CGG | 0.612059 | 1_1:-60561823 | None:intergenic |
| GTCGATCGAAGCCACTAACA+CGG | 0.612398 | 1_1:-60558289 | None:intergenic |
| GATGGGCGCACAATTGGTGA+TGG | 0.613067 | 1_1:+60565499 | Msa0033210:CDS |
| TGTATGCAACAGGAATCTGA+TGG | 0.614036 | 1_1:+60558415 | Msa0033210:intron |
| AAATGTTCCATCGCGAGATG+AGG | 0.614777 | 1_1:+60561555 | Msa0033210:CDS |
| TGTTAGAGAAAGTCGGATGT+GGG | 0.617381 | 1_1:-60561816 | None:intergenic |
| GGACTCACCTCATCTCGCGA+TGG | 0.621549 | 1_1:-60561562 | None:intergenic |
| TTGACATGTATATCTACAGG+AGG | 0.622047 | 1_1:-60565977 | None:intergenic |
| AGAAGTGCATACCGCAGATG+AGG | 0.622720 | 1_1:+60564780 | Msa0033210:CDS |
| CCTCAATAACATACTCGCCA+AGG | 0.624853 | 1_1:+60563726 | Msa0033210:CDS |
| AGGTGGAAGTGATTCACTCA+TGG | 0.626814 | 1_1:+60558171 | Msa0033210:CDS |
| TGTACACCATTATACCACCA+AGG | 0.633013 | 1_1:-60560473 | None:intergenic |
| ATGTCACGTCCAAAATGGAG+TGG | 0.635723 | 1_1:+60557977 | None:intergenic |
| AAGGGTGCTTGGTTTGCCGG+AGG | 0.637662 | 1_1:+60559406 | Msa0033210:CDS |
| TGTGCCACGTGAGAGTGCTA+AGG | 0.643139 | 1_1:+60560988 | Msa0033210:CDS |
| GTACACCATTATACCACCAA+GGG | 0.650442 | 1_1:-60560472 | None:intergenic |
| TGGTGAGTTCCTGCGCGTGG+TGG | 0.654939 | 1_1:-60563113 | None:intergenic |
| ACGTCCAAAATGGAGTGGAC+TGG | 0.655257 | 1_1:+60557982 | None:intergenic |
| CGGAGGAAATGAGAATAGAG+AGG | 0.656402 | 1_1:-60558269 | None:intergenic |
| CCTGTTTATGATAATGAGCG+TGG | 0.662350 | 1_1:+60563073 | Msa0033210:CDS |
| CCCAACTCAAAGAACGATGG+AGG | 0.664360 | 1_1:-60559617 | None:intergenic |
| GGAAGACAGTAATCAGCATG+TGG | 0.665958 | 1_1:-60564533 | None:intergenic |
| AAACCCAACTCAAAGAACGA+TGG | 0.667733 | 1_1:-60559620 | None:intergenic |
| TAGGCTAAGATTGGTAGCAG+CGG | 0.675348 | 1_1:-60565760 | None:intergenic |
| CGCTCATTATCATAAACAGG+GGG | 0.676475 | 1_1:-60563070 | None:intergenic |
| TTTGATTCAGTTGTCCAAGG+TGG | 0.677021 | 1_1:+60561128 | Msa0033210:CDS |
| AAGCAAAGGAGAGCTCAGAA+GGG | 0.681502 | 1_1:-60560906 | None:intergenic |
| CATAGCTTAGGCGAAGATGG+AGG | 0.681688 | 1_1:+60558151 | Msa0033210:exon |
| GGAACAAAGAAAGGATACTG+AGG | 0.684365 | 1_1:+60560514 | Msa0033210:CDS |
| GTTTGGTGAGTTCCTGCGCG+TGG | 0.691306 | 1_1:-60563116 | None:intergenic |
| CAATGCTGGGCTCATCCCAG+AGG | 0.700855 | 1_1:-60562355 | None:intergenic |
| AGTACCTTAGCACTCTCACG+TGG | 0.704094 | 1_1:-60560992 | None:intergenic |
| ATCCGACTTTCTCTAACACG+AGG | 0.705151 | 1_1:+60561821 | Msa0033210:CDS |
| ACGCTCATTATCATAAACAG+GGG | 0.715678 | 1_1:-60563071 | None:intergenic |
| TTATTGGTGAACCTCATCTG+CGG | 0.721267 | 1_1:-60564791 | None:intergenic |
| TCTGCAGCATCAATAACAGG+CGG | 0.721983 | 1_1:-60559692 | None:intergenic |
| TACACCATTATACCACCAAG+GGG | 0.724561 | 1_1:-60560471 | None:intergenic |
| GATCGAAGCCACTAACACGG+AGG | 0.766453 | 1_1:-60558286 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTATAATTTATTATAG+AGG | + | chr1_1:60558089-60558108 | Msa0033210:five_prime_UTR | 10.0% |
| !! | AAAAAAAAACGTTATAATTA+CGG | - | chr1_1:60558562-60558581 | None:intergenic | 10.0% |
| !!! | TTTTTTTTCTGTTTATTTTT+TGG | + | chr1_1:60558603-60558622 | Msa0033210:intron | 10.0% |
| !!! | AGATTTTTTTTTTTTTTTGA+GGG | - | chr1_1:60561231-60561250 | None:intergenic | 10.0% |
| !!! | TAGATTTTTTTTTTTTTTTG+AGG | - | chr1_1:60561232-60561251 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAATCTAGAT+AGG | + | chr1_1:60561235-60561254 | Msa0033210:intron | 10.0% |
| !! | AAAAAAAAAAAATTGTAATC+AGG | - | chr1_1:60562024-60562043 | None:intergenic | 10.0% |
| !!! | CAATTTTTTTTTTTTAGTTT+AGG | + | chr1_1:60562029-60562048 | Msa0033210:intron | 10.0% |
| !! | TAAAAAAACATAAATATCTT+GGG | - | chr1_1:60562445-60562464 | None:intergenic | 10.0% |
| !!! | GAATTAATTAGAAAATTTTA+TGG | + | chr1_1:60562489-60562508 | Msa0033210:intron | 10.0% |
| !!! | ATAAGTATATTTTATTATCT+TGG | + | chr1_1:60564646-60564665 | Msa0033210:intron | 10.0% |
| !! | ATTTAAAAACAATATACATT+AGG | - | chr1_1:60565685-60565704 | None:intergenic | 10.0% |
| !! | AAAAAAAACGTTATAATTAC+GGG | - | chr1_1:60558561-60558580 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTGGTGTATATT+TGG | + | chr1_1:60558614-60558633 | Msa0033210:intron | 15.0% |
| !! | TAACTCTATAAAATTATGTT+TGG | - | chr1_1:60558854-60558873 | None:intergenic | 15.0% |
| !! | GATAGATTTCATAAAAAATT+TGG | - | chr1_1:60560036-60560055 | None:intergenic | 15.0% |
| !! | ACATAAAACTTACATAAATT+AGG | - | chr1_1:60560109-60560128 | None:intergenic | 15.0% |
| !! | AAAAAAGATATTTAAACTTG+AGG | + | chr1_1:60561184-60561203 | Msa0033210:CDS | 15.0% |
| !! | TTTATTTGCATAAATTACAA+GGG | + | chr1_1:60561971-60561990 | Msa0033210:intron | 15.0% |
| !! | GAATTAGAAAATTATTCAAT+GGG | + | chr1_1:60562065-60562084 | Msa0033210:intron | 15.0% |
| !! | ATAATATAAAATATAGTCGA+CGG | - | chr1_1:60562242-60562261 | None:intergenic | 15.0% |
| !! | AAAAGAAGATAACATAAAAT+TGG | - | chr1_1:60562326-60562345 | None:intergenic | 15.0% |
| !! | ATATCATTATTACTTATTGA+AGG | - | chr1_1:60562418-60562437 | None:intergenic | 15.0% |
| !! | TCAATAAGTAATAATGATAT+TGG | + | chr1_1:60562418-60562437 | Msa0033210:intron | 15.0% |
| !! | GTAAAAAAACATAAATATCT+TGG | - | chr1_1:60562446-60562465 | None:intergenic | 15.0% |
| !!! | ATTTACGTAATTTTTTATGA+TGG | + | chr1_1:60562879-60562898 | Msa0033210:intron | 15.0% |
| !!! | TTTATTTTAATAATCTATGC+TGG | + | chr1_1:60563177-60563196 | Msa0033210:intron | 15.0% |
| !! | TTCATAATGATAATTGAAAT+TGG | + | chr1_1:60563248-60563267 | Msa0033210:intron | 15.0% |
| !! | TTAAATCTAAATTCATTGAA+GGG | - | chr1_1:60563405-60563424 | None:intergenic | 15.0% |
| !!! | AGAATAACTACTTTTTTTAA+TGG | + | chr1_1:60563509-60563528 | Msa0033210:intron | 15.0% |
| !! | AATATATGTAAAAAATCACA+AGG | - | chr1_1:60563766-60563785 | None:intergenic | 15.0% |
| !! | TTACATATATTAATGCAAAA+TGG | + | chr1_1:60563775-60563794 | Msa0033210:intron | 15.0% |
| !!! | TTGGAGTTATTATTATATTT+TGG | + | chr1_1:60564665-60564684 | Msa0033210:intron | 15.0% |
| !!! | AATTTAATTTAACTCCAATA+TGG | + | chr1_1:60565092-60565111 | Msa0033210:intron | 15.0% |
| !!! | ATTTAATTTAACTCCAATAT+GGG | + | chr1_1:60565093-60565112 | Msa0033210:intron | 15.0% |
| !! | AATTGCATATATAAACTAAT+CGG | - | chr1_1:60565867-60565886 | None:intergenic | 15.0% |
| !!! | ATCTAAAATAGAATTGTTGA+AGG | - | chr1_1:60558516-60558535 | None:intergenic | 20.0% |
| !! | AAAAAAACGTTATAATTACG+GGG | - | chr1_1:60558560-60558579 | None:intergenic | 20.0% |
| !! | TAAACAGAAAAAAAACTTGT+GGG | - | chr1_1:60558598-60558617 | None:intergenic | 20.0% |
| !! | ATAAACAGAAAAAAAACTTG+TGG | - | chr1_1:60558599-60558618 | None:intergenic | 20.0% |
| !! | CAGATAAAATGATTTATGTT+TGG | + | chr1_1:60558692-60558711 | Msa0033210:intron | 20.0% |
| !!! | ATAATTCAACTCACTTTTAA+AGG | - | chr1_1:60558726-60558745 | None:intergenic | 20.0% |
| !!! | TGTTAGAATCAATTTTAGAA+TGG | + | chr1_1:60558755-60558774 | Msa0033210:intron | 20.0% |
| !!! | TTTTTTGAGAAATCAATTGT+GGG | - | chr1_1:60558822-60558841 | None:intergenic | 20.0% |
| !! | TTGATTAGATTATTATCCAA+CGG | - | chr1_1:60559294-60559313 | None:intergenic | 20.0% |
| !!! | AATTCTTTGTTTGTAGTTAT+TGG | + | chr1_1:60559319-60559338 | Msa0033210:intron | 20.0% |
| !!! | TTGTTTTTCATACTTCATTA+AGG | - | chr1_1:60559771-60559790 | None:intergenic | 20.0% |
| !! | AGATGAAAATAAATTCAAAG+AGG | + | chr1_1:60559814-60559833 | Msa0033210:intron | 20.0% |
| !!! | ATCTTTCAAAAAAAGTATTC+TGG | - | chr1_1:60560011-60560030 | None:intergenic | 20.0% |
| !! | AATTGAAGTAAGATTAAAAG+TGG | - | chr1_1:60560175-60560194 | None:intergenic | 20.0% |
| !!! | TTTTTATCGTTTTAATTTGC+AGG | + | chr1_1:60560194-60560213 | Msa0033210:intron | 20.0% |
| !!! | TTTTTGTTCTGTTATATATC+AGG | + | chr1_1:60561097-60561116 | Msa0033210:intron | 20.0% |
| !! | ATGTTCAACTTTCAATTATT+GGG | - | chr1_1:60561355-60561374 | None:intergenic | 20.0% |
| !!! | TTTCATTCAGTTATGTATTT+TGG | + | chr1_1:60561385-60561404 | Msa0033210:intron | 20.0% |
| !!! | CTTTATTTGCATAAATTACA+AGG | + | chr1_1:60561970-60561989 | Msa0033210:intron | 20.0% |
| !! | GGAATTAGAAAATTATTCAA+TGG | + | chr1_1:60562064-60562083 | Msa0033210:intron | 20.0% |
| !!! | TTATGTTATCTTCTTTTCTA+AGG | + | chr1_1:60562329-60562348 | Msa0033210:intron | 20.0% |
| !! | ATTATTACTTATTGAAGGAT+AGG | - | chr1_1:60562413-60562432 | None:intergenic | 20.0% |
| !! | TAATATATGTATGTCAATGT+TGG | + | chr1_1:60562467-60562486 | Msa0033210:intron | 20.0% |
| !!! | CTTTGAAATTACTTATGTTT+TGG | + | chr1_1:60562729-60562748 | Msa0033210:intron | 20.0% |
| !!! | TTTTTTTGCTGACAAAAAAA+TGG | - | chr1_1:60562830-60562849 | None:intergenic | 20.0% |
| !!! | TTGTATAATTGTTAGTTTGA+AGG | + | chr1_1:60563152-60563171 | Msa0033210:intron | 20.0% |
| !!! | TGTATAATTGTTAGTTTGAA+GGG | + | chr1_1:60563153-60563172 | Msa0033210:intron | 20.0% |
| !! | GTTAAATCTAAATTCATTGA+AGG | - | chr1_1:60563406-60563425 | None:intergenic | 20.0% |
| !!! | ATGTTCTAAGAGTAAAAAAA+AGG | - | chr1_1:60563483-60563502 | None:intergenic | 20.0% |
| !!! | TTTAGTAACATACTCTTTTT+TGG | + | chr1_1:60563622-60563641 | Msa0033210:intron | 20.0% |
| !! | GGTAAAACAAACAAATAAAA+AGG | - | chr1_1:60563672-60563691 | None:intergenic | 20.0% |
| !!! | AGATTTTATACATAAGAACA+AGG | + | chr1_1:60563827-60563846 | Msa0033210:intron | 20.0% |
| !!! | GATTTTATACATAAGAACAA+GGG | + | chr1_1:60563828-60563847 | Msa0033210:intron | 20.0% |
| !!! | TTTTAAGCTAATCATGAATT+TGG | + | chr1_1:60563857-60563876 | Msa0033210:intron | 20.0% |
| !! | TAATTTAACAAGTGAAACTA+TGG | + | chr1_1:60563942-60563961 | Msa0033210:intron | 20.0% |
| !! | TAAAAAATGTGTTAAAGCTA+AGG | - | chr1_1:60563973-60563992 | None:intergenic | 20.0% |
| !!! | TGGTTTGATAATTATATACT+AGG | + | chr1_1:60564170-60564189 | Msa0033210:intron | 20.0% |
| !!! | GGTTTGATAATTATATACTA+GGG | + | chr1_1:60564171-60564190 | Msa0033210:intron | 20.0% |
| !!! | TGTTAATGCATTTTATTTTG+TGG | + | chr1_1:60564613-60564632 | Msa0033210:intron | 20.0% |
| !!! | TTATTATATTTTGGTACTTG+CGG | + | chr1_1:60564674-60564693 | Msa0033210:intron | 20.0% |
| !! | TCTGGAAAAGAATATATTAT+TGG | - | chr1_1:60564810-60564829 | None:intergenic | 20.0% |
| !!! | TTCTAAAATTAACAGATTTC+TGG | - | chr1_1:60564828-60564847 | None:intergenic | 20.0% |
| !! | ATATATTACTCCTATCATAT+AGG | + | chr1_1:60565028-60565047 | Msa0033210:intron | 20.0% |
| !! | TCCATTAAATGATCATATTA+CGG | + | chr1_1:60565132-60565151 | Msa0033210:intron | 20.0% |
| !! | GAAAATAAACATCTACTAAA+TGG | - | chr1_1:60565430-60565449 | None:intergenic | 20.0% |
| !! | AACAATATACATTAGGATTA+TGG | - | chr1_1:60565678-60565697 | None:intergenic | 20.0% |
| !! | ATTGCATATATAAACTAATC+GGG | - | chr1_1:60565866-60565885 | None:intergenic | 20.0% |
| !!! | TTGACTCTAGTTTTTCAATA+AGG | + | chr1_1:60558044-60558063 | Msa0033210:five_prime_UTR | 25.0% |
| !! | ATAATTTATTATAGAGGCGT+TGG | + | chr1_1:60558095-60558114 | Msa0033210:five_prime_UTR | 25.0% |
| !! | TAATGTACTCTTTTTCTCAA+AGG | + | chr1_1:60558222-60558241 | Msa0033210:CDS | 25.0% |
| !! | AATGTACTCTTTTTCTCAAA+GGG | + | chr1_1:60558223-60558242 | Msa0033210:CDS | 25.0% |
| ! | GTTGTTAATGACGTAATTTA+CGG | + | chr1_1:60558445-60558464 | Msa0033210:CDS | 25.0% |
| !! | CAAAAAGTATAGATTCTGTA+AGG | + | chr1_1:60558477-60558496 | Msa0033210:CDS | 25.0% |
| !!! | CTTTTTTGAGAAATCAATTG+TGG | - | chr1_1:60558823-60558842 | None:intergenic | 25.0% |
| !! | TATAGAGTTAGAATTGCTTT+TGG | + | chr1_1:60558864-60558883 | Msa0033210:intron | 25.0% |
| !!! | ATAGAGTTAGAATTGCTTTT+GGG | + | chr1_1:60558865-60558884 | Msa0033210:intron | 25.0% |
| ! | ATAAGCTGTAATTATGACTA+AGG | - | chr1_1:60558934-60558953 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGATATATGCTGA+AGG | - | chr1_1:60559388-60559407 | None:intergenic | 25.0% |
| ! | TTCAGCATATATCAAAACAA+AGG | + | chr1_1:60559387-60559406 | Msa0033210:intron | 25.0% |
| ! | TCAGCATATATCAAAACAAA+GGG | + | chr1_1:60559388-60559407 | Msa0033210:intron | 25.0% |
| !!! | TAGAATTTGTTATGTGGTTT+TGG | - | chr1_1:60559986-60560005 | None:intergenic | 25.0% |
| ! | TAAGATTAAAAGTGGAATTC+AGG | - | chr1_1:60560167-60560186 | None:intergenic | 25.0% |
| ! | AATGTTGATGCATACATATA+TGG | + | chr1_1:60560380-60560399 | Msa0033210:intron | 25.0% |
| ! | ATGTTGATGCATACATATAT+GGG | + | chr1_1:60560381-60560400 | Msa0033210:intron | 25.0% |
| !! | TGAATTTTAAACTTGTCAGT+TGG | + | chr1_1:60560414-60560433 | Msa0033210:intron | 25.0% |
| !! | GAATTTTAAACTTGTCAGTT+GGG | + | chr1_1:60560415-60560434 | Msa0033210:intron | 25.0% |
| !!! | ACATAAATCTACTGGTTTTA+AGG | + | chr1_1:60560493-60560512 | Msa0033210:CDS | 25.0% |
| ! | AAACATTGAAAAAGATTTCG+GGG | - | chr1_1:60560617-60560636 | None:intergenic | 25.0% |
| ! | GAAACATTGAAAAAGATTTC+GGG | - | chr1_1:60560618-60560637 | None:intergenic | 25.0% |
| ! | GGAAACATTGAAAAAGATTT+CGG | - | chr1_1:60560619-60560638 | None:intergenic | 25.0% |
| ! | CCAATCATAAGGAAATATAT+GGG | - | chr1_1:60560746-60560765 | None:intergenic | 25.0% |
| ! | ACCAATCATAAGGAAATATA+TGG | - | chr1_1:60560747-60560766 | None:intergenic | 25.0% |
| ! | TATATTTCCTTATGATTGGT+TGG | + | chr1_1:60560747-60560766 | Msa0033210:intron | 25.0% |
| !! | ATATTTCCTTATGATTGGTT+GGG | + | chr1_1:60560748-60560767 | Msa0033210:intron | 25.0% |
| ! | AACAAATCATAGAGAGAAAA+GGG | - | chr1_1:60560830-60560849 | None:intergenic | 25.0% |
| !!! | GTACTTGTTTTACAACATTA+AGG | + | chr1_1:60561010-60561029 | Msa0033210:intron | 25.0% |
| !!! | AGAAATTGAAAGTTGATATC+CGG | + | chr1_1:60561277-60561296 | Msa0033210:intron | 25.0% |
| ! | GATGTTCAACTTTCAATTAT+TGG | - | chr1_1:60561356-60561375 | None:intergenic | 25.0% |
| !! | TTCAGTTGTATTTTGTAGAT+TGG | + | chr1_1:60561413-60561432 | Msa0033210:intron | 25.0% |
| ! | GTAACATATATTGCAGATTA+AGG | + | chr1_1:60561748-60561767 | Msa0033210:intron | 25.0% |
| !! | CTATTTTCAAAACCCTTATT+AGG | + | chr1_1:60561774-60561793 | Msa0033210:CDS | 25.0% |
| ! | AAACATTCCATTCCTAATAA+GGG | - | chr1_1:60561789-60561808 | None:intergenic | 25.0% |
| ! | ATAAATTAAACAAAGAGTCC+AGG | - | chr1_1:60561864-60561883 | None:intergenic | 25.0% |
| ! | ATTTGATTCTTCAATTGACA+TGG | + | chr1_1:60561922-60561941 | Msa0033210:intron | 25.0% |
| !! | TTTAGTTTAGGAACCTATTT+AGG | + | chr1_1:60562041-60562060 | Msa0033210:intron | 25.0% |
| ! | TTAGTTTAGGAACCTATTTA+GGG | + | chr1_1:60562042-60562061 | Msa0033210:intron | 25.0% |
| !! | ATTTTCTAATTCCCCTAAAT+AGG | - | chr1_1:60562057-60562076 | None:intergenic | 25.0% |
| !! | TGAGTTATCTTTTTCTTGTA+TGG | + | chr1_1:60562149-60562168 | Msa0033210:intron | 25.0% |
| ! | TTTCGCAACTGAATTAAATA+TGG | - | chr1_1:60562292-60562311 | None:intergenic | 25.0% |
| ! | GATAACATAAAATTGGTAAG+TGG | - | chr1_1:60562319-60562338 | None:intergenic | 25.0% |
| !!! | TATCATTTCCACTTTTTTCA+AGG | + | chr1_1:60562534-60562553 | Msa0033210:intron | 25.0% |
| !!! | ATCATTTCCACTTTTTTCAA+GGG | + | chr1_1:60562535-60562554 | Msa0033210:intron | 25.0% |
| ! | CAATATATCAACAACAACAA+AGG | - | chr1_1:60562635-60562654 | None:intergenic | 25.0% |
| !! | TCTAATTTAACTCTTTTGCA+AGG | + | chr1_1:60562793-60562812 | Msa0033210:intron | 25.0% |
| ! | ATCGAGTCATTTAATAAACT+TGG | + | chr1_1:60562905-60562924 | Msa0033210:intron | 25.0% |
| ! | AATGATAATTGAAATTGGCA+TGG | + | chr1_1:60563253-60563272 | Msa0033210:intron | 25.0% |
| ! | ATGATAATTGAAATTGGCAT+GGG | + | chr1_1:60563254-60563273 | Msa0033210:intron | 25.0% |
| ! | AAGGAAAGAAATGTTATGTT+TGG | + | chr1_1:60563315-60563334 | Msa0033210:intron | 25.0% |
| !! | ATTTAACCCTTTCATTTTAG+TGG | + | chr1_1:60563419-60563438 | Msa0033210:intron | 25.0% |
| !! | TATATTTTCCAAATTACCCA+TGG | - | chr1_1:60563457-60563476 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATATGAGAC+CGG | + | chr1_1:60563547-60563566 | Msa0033210:intron | 25.0% |
| !! | AAGAGTATGTTACTAAAACT+AGG | - | chr1_1:60563619-60563638 | None:intergenic | 25.0% |
| ! | TATACATGGATATTGATCTA+AGG | - | chr1_1:60563893-60563912 | None:intergenic | 25.0% |
| ! | ATCAATATCCATGTATATTG+TGG | + | chr1_1:60563896-60563915 | Msa0033210:intron | 25.0% |
| ! | TCAATATCCATGTATATTGT+GGG | + | chr1_1:60563897-60563916 | Msa0033210:intron | 25.0% |
| !!! | AGCATTTTATTTTAGAAGAG+CGG | + | chr1_1:60564743-60564762 | Msa0033210:CDS | 25.0% |
| ! | TCCGTAATATGATCATTTAA+TGG | - | chr1_1:60565136-60565155 | None:intergenic | 25.0% |
| ! | TATTGAACATCAGATTTATG+TGG | - | chr1_1:60565388-60565407 | None:intergenic | 25.0% |
| ! | AATCTGATGTTCAATAAACT+TGG | + | chr1_1:60565392-60565411 | Msa0033210:intron | 25.0% |
| ! | GGAAATTAAGTCCAAATATT+CGG | - | chr1_1:60565657-60565676 | None:intergenic | 25.0% |
| !! | GATTGAAAAATTGATGATCT+AGG | - | chr1_1:60565782-60565801 | None:intergenic | 25.0% |
| ! | GGGAACTAATAATTCTATTT+GGG | - | chr1_1:60565846-60565865 | None:intergenic | 25.0% |
| !! | TTTTTGACATGTATATCTAC+AGG | - | chr1_1:60565983-60566002 | None:intergenic | 25.0% |
| ! | AAGCTATGGAATCGAATTTT+TGG | - | chr1_1:60558139-60558158 | None:intergenic | 30.0% |
| AAAATTCGATTCCATAGCTT+AGG | + | chr1_1:60558139-60558158 | Msa0033210:five_prime_UTR | 30.0% | |
| TTGAAAGAGTAACAGAAATG+AGG | - | chr1_1:60558394-60558413 | None:intergenic | 30.0% | |
| ! | GTAATTATGACTAAGGTGTT+TGG | - | chr1_1:60558927-60558946 | None:intergenic | 30.0% |
| AGTCATAATTACAGCTTATC+CGG | + | chr1_1:60558935-60558954 | Msa0033210:intron | 30.0% | |
| ! | TCAACAGTTTTTGAATTTGC+AGG | + | chr1_1:60559018-60559037 | Msa0033210:intron | 30.0% |
| ! | CAACAGTTTTTGAATTTGCA+GGG | + | chr1_1:60559019-60559038 | Msa0033210:intron | 30.0% |
| !! | TCTGTCATTATAGAGTGTTT+TGG | - | chr1_1:60559051-60559070 | None:intergenic | 30.0% |
| ACTCGCAATTTAAACAACAA+AGG | - | chr1_1:60559114-60559133 | None:intergenic | 30.0% | |
| CTAGATCACTAATCATTACT+TGG | + | chr1_1:60559359-60559378 | Msa0033210:intron | 30.0% | |
| AAGAAATCCTCTTGACATAT+TGG | + | chr1_1:60559463-60559482 | Msa0033210:CDS | 30.0% | |
| TTCAAAAACTGAAATACCTC+GGG | - | chr1_1:60559731-60559750 | None:intergenic | 30.0% | |
| GTTCAAAAACTGAAATACCT+CGG | - | chr1_1:60559732-60559751 | None:intergenic | 30.0% | |
| ATTCAAAGAGGAATCAGAAT+AGG | + | chr1_1:60559826-60559845 | Msa0033210:intron | 30.0% | |
| CAAGACATGTTGAAAGAATA+AGG | - | chr1_1:60560070-60560089 | None:intergenic | 30.0% | |
| CTTATTCTTTCAACATGTCT+TGG | + | chr1_1:60560068-60560087 | Msa0033210:intron | 30.0% | |
| !! | TTAATTTGCAGGCTACTTTA+CGG | + | chr1_1:60560205-60560224 | Msa0033210:intron | 30.0% |
| TGACAAAACTTAGCATTACA+AGG | - | chr1_1:60560307-60560326 | None:intergenic | 30.0% | |
| AATGGTGTACATAAATCTAC+TGG | + | chr1_1:60560485-60560504 | Msa0033210:CDS | 30.0% | |
| !!! | TGGTTTTAAGGAACAAAGAA+AGG | + | chr1_1:60560505-60560524 | Msa0033210:CDS | 30.0% |
| ! | TTCTTTTAACGGGAACTAAA+CGG | - | chr1_1:60560565-60560584 | None:intergenic | 30.0% |
| AACATTGAAAAAGATTTCGG+GGG | - | chr1_1:60560616-60560635 | None:intergenic | 30.0% | |
| ATACTATTTATGCACAACTG+TGG | - | chr1_1:60560640-60560659 | None:intergenic | 30.0% | |
| TATTATCGCAATTGAACACA+AGG | + | chr1_1:60560669-60560688 | Msa0033210:intron | 30.0% | |
| ATGGGATTTAATACTGTACA+TGG | - | chr1_1:60560728-60560747 | None:intergenic | 30.0% | |
| CCCATATATTTCCTTATGAT+TGG | + | chr1_1:60560743-60560762 | Msa0033210:intron | 30.0% | |
| ! | TATTTCCTTATGATTGGTTG+GGG | + | chr1_1:60560749-60560768 | Msa0033210:intron | 30.0% |
| CAACAAATCATAGAGAGAAA+AGG | - | chr1_1:60560831-60560850 | None:intergenic | 30.0% | |
| !! | CTTTTCTCTCTATGATTTGT+TGG | + | chr1_1:60560829-60560848 | Msa0033210:CDS | 30.0% |
| ! | AATTTTTCATTTGCAGGAAC+TGG | - | chr1_1:60560944-60560963 | None:intergenic | 30.0% |
| AAATGAAAAATTGCTCGCTT+GGG | + | chr1_1:60560952-60560971 | Msa0033210:CDS | 30.0% | |
| AAATATATACATGACAGCTC+CGG | - | chr1_1:60561299-60561318 | None:intergenic | 30.0% | |
| ! | GAGCTGTCATGTATATATTT+TGG | + | chr1_1:60561299-60561318 | Msa0033210:intron | 30.0% |
| ! | TGATTTTCATATATCTCACC+AGG | + | chr1_1:60561500-60561519 | Msa0033210:intron | 30.0% |
| CAGGATATAAAATGAGGTAA+CGG | - | chr1_1:60561624-60561643 | None:intergenic | 30.0% | |
| ! | ACCTCATTTTATATCCTGAT+TGG | + | chr1_1:60561626-60561645 | Msa0033210:intron | 30.0% |
| TTCAAAACCCTTATTAGGAA+TGG | + | chr1_1:60561779-60561798 | Msa0033210:CDS | 30.0% | |
| CAAACATTCCATTCCTAATA+AGG | - | chr1_1:60561790-60561809 | None:intergenic | 30.0% | |
| TTCTTCAATTGACATGGAAA+TGG | + | chr1_1:60561928-60561947 | Msa0033210:intron | 30.0% | |
| TAGTTTAGGAACCTATTTAG+GGG | + | chr1_1:60562043-60562062 | Msa0033210:intron | 30.0% | |
| AAAAGATAACTCAAGTGACT+GGG | - | chr1_1:60562142-60562161 | None:intergenic | 30.0% | |
| AAAAAGATAACTCAAGTGAC+TGG | - | chr1_1:60562143-60562162 | None:intergenic | 30.0% | |
| !! | GGTTGATAGTTTCATAACTT+CGG | - | chr1_1:60562271-60562290 | None:intergenic | 30.0% |
| ACATAAAATTGGTAAGTGGT+CGG | - | chr1_1:60562315-60562334 | None:intergenic | 30.0% | |
| TTAGCATTCAAGAAGATCAT+AGG | + | chr1_1:60562669-60562688 | Msa0033210:intron | 30.0% | |
| TCATGTCAAATCACATAAGA+CGG | - | chr1_1:60562766-60562785 | None:intergenic | 30.0% | |
| TCTTATGTGATTTGACATGA+TGG | + | chr1_1:60562766-60562785 | Msa0033210:intron | 30.0% | |
| !! | AACTTGCTTTTCTAATGGAT+GGG | + | chr1_1:60562991-60563010 | Msa0033210:intron | 30.0% |
| ACAAACAAGAAACTTACGTT+TGG | - | chr1_1:60563136-60563155 | None:intergenic | 30.0% | |
| ! | GATTTTCATTCTTTCACGTA+TGG | + | chr1_1:60563212-60563231 | Msa0033210:intron | 30.0% |
| ! | TCTTTCCTTATATTTGAGAC+CGG | - | chr1_1:60563304-60563323 | None:intergenic | 30.0% |
| AATTCATTGAAGGGTAATGT+GGG | - | chr1_1:60563396-60563415 | None:intergenic | 30.0% | |
| AAATTCATTGAAGGGTAATG+TGG | - | chr1_1:60563397-60563416 | None:intergenic | 30.0% | |
| CTTGTTCCACTAAAATGAAA+GGG | - | chr1_1:60563428-60563447 | None:intergenic | 30.0% | |
| ACTTGTTCCACTAAAATGAA+AGG | - | chr1_1:60563429-60563448 | None:intergenic | 30.0% | |
| TACTAAAACTAGGATGTTGT+TGG | - | chr1_1:60563609-60563628 | None:intergenic | 30.0% | |
| !!! | TTGTTTGTTTTACCAGAGTT+TGG | + | chr1_1:60563678-60563697 | Msa0033210:intron | 30.0% |
| AGCTAATCATGAATTTGGAT+AGG | + | chr1_1:60563862-60563881 | Msa0033210:intron | 30.0% | |
| CAATATCCATGTATATTGTG+GGG | + | chr1_1:60563898-60563917 | Msa0033210:intron | 30.0% | |
| ATTATTCCCCACAATATACA+TGG | - | chr1_1:60563907-60563926 | None:intergenic | 30.0% | |
| ! | TTTTAAATGTCTCTGTTCTC+TGG | + | chr1_1:60564150-60564169 | Msa0033210:intron | 30.0% |
| ACTGTGTAAATCAATAGTCT+AGG | - | chr1_1:60564235-60564254 | None:intergenic | 30.0% | |
| GTGTAGTTCATAGTTAAGAA+AGG | + | chr1_1:60564497-60564516 | Msa0033210:intron | 30.0% | |
| ACAAATCTCATTGAGAGAAA+AGG | - | chr1_1:60564592-60564611 | None:intergenic | 30.0% | |
| TCAGTTGATTACGTATTTGT+TGG | + | chr1_1:60564862-60564881 | Msa0033210:intron | 30.0% | |
| ! | TTACGTATTTGTTGGACTTA+TGG | + | chr1_1:60564870-60564889 | Msa0033210:intron | 30.0% |
| AGAAATCTAGGAGTAACATT+TGG | - | chr1_1:60564913-60564932 | None:intergenic | 30.0% | |
| !! | TCAAAAAGCTCTAGAAATCT+AGG | - | chr1_1:60564925-60564944 | None:intergenic | 30.0% |
| ACACAAGATTGCATTTATTG+TGG | + | chr1_1:60564969-60564988 | Msa0033210:intron | 30.0% | |
| GTTAATTACGCCTATATGAT+AGG | - | chr1_1:60565041-60565060 | None:intergenic | 30.0% | |
| AACTGCTTTCTGATTTATTG+TGG | + | chr1_1:60565058-60565077 | Msa0033210:intron | 30.0% | |
| AAAACTACTGAATCCCATAT+TGG | - | chr1_1:60565109-60565128 | None:intergenic | 30.0% | |
| TATTCAAACCAATAGAGAGA+GGG | - | chr1_1:60565237-60565256 | None:intergenic | 30.0% | |
| ATATTCAAACCAATAGAGAG+AGG | - | chr1_1:60565238-60565257 | None:intergenic | 30.0% | |
| ACCAATAACTAGAAAATTGC+AGG | + | chr1_1:60565531-60565550 | Msa0033210:CDS | 30.0% | |
| TAAAAAGTTGACTGAAGAGT+CGG | + | chr1_1:60565561-60565580 | Msa0033210:CDS | 30.0% | |
| ACTTTCCAATACCGAATATT+TGG | + | chr1_1:60565643-60565662 | Msa0033210:intron | 30.0% | |
| TAAGTCCAAATATTCGGTAT+TGG | - | chr1_1:60565651-60565670 | None:intergenic | 30.0% | |
| GACTTGGAAATAAGTGAAAA+TGG | + | chr1_1:60565729-60565748 | Msa0033210:three_prime_UTR | 30.0% | |
| ! | TAATTCTATTTGGGACCAAA+AGG | - | chr1_1:60565837-60565856 | None:intergenic | 30.0% |
| CGGGAACTAATAATTCTATT+TGG | - | chr1_1:60565847-60565866 | None:intergenic | 30.0% | |
| CAGATAAAGATACCATATCT+AGG | - | chr1_1:60565946-60565965 | None:intergenic | 30.0% | |
| ! | AGATGAAGTACTCTCCAATA+TGG | + | chr1_1:60558319-60558338 | Msa0033210:CDS | 35.0% |
| AGCGAGAAATAGTACCATAT+TGG | - | chr1_1:60558336-60558355 | None:intergenic | 35.0% | |
| CTCTTTCAATTGTATGCAAC+AGG | + | chr1_1:60558405-60558424 | Msa0033210:intron | 35.0% | |
| ACAGGAATCTGATGGAAATA+AGG | + | chr1_1:60558423-60558442 | Msa0033210:intron | 35.0% | |
| AATGACGTAATTTACGGTTC+TGG | + | chr1_1:60558451-60558470 | Msa0033210:CDS | 35.0% | |
| GAACAAATCGCTATTATTCG+AGG | + | chr1_1:60559196-60559215 | Msa0033210:intron | 35.0% | |
| GTTCAAATTCCACTGTTGTA+TGG | - | chr1_1:60559268-60559287 | None:intergenic | 35.0% | |
| !! | ATATCAAAACAAAGGGTGCT+TGG | + | chr1_1:60559395-60559414 | Msa0033210:CDS | 35.0% |
| AGTGTTACCAATATGTCAAG+AGG | - | chr1_1:60559473-60559492 | None:intergenic | 35.0% | |
| TTGAACGAGCATATGAGAAA+CGG | - | chr1_1:60559546-60559565 | None:intergenic | 35.0% | |
| TTTCTCATATGCTCGTTCAA+TGG | + | chr1_1:60559546-60559565 | Msa0033210:intron | 35.0% | |
| TATAATGAACTCTGCGAGAA+TGG | + | chr1_1:60559662-60559681 | Msa0033210:CDS | 35.0% | |
| TCATATCCTTAGTCAACCAA+GGG | - | chr1_1:60559924-60559943 | None:intergenic | 35.0% | |
| TTCATATCCTTAGTCAACCA+AGG | - | chr1_1:60559925-60559944 | None:intergenic | 35.0% | |
| !! | CTGGTCTAGAATTTGTTATG+TGG | - | chr1_1:60559992-60560011 | None:intergenic | 35.0% |
| ! | TAATTTGCAGGCTACTTTAC+GGG | + | chr1_1:60560206-60560225 | Msa0033210:intron | 35.0% |
| ! | AAAACCAATAGATGGCTTGT+GGG | + | chr1_1:60560448-60560467 | Msa0033210:CDS | 35.0% |
| ! | ATGACCTGGACTTCTTTTAA+CGG | - | chr1_1:60560576-60560595 | None:intergenic | 35.0% |
| CTGCAAATGATATAATGACC+TGG | - | chr1_1:60560590-60560609 | None:intergenic | 35.0% | |
| TCATAGAGAGAAAAGGGAAA+TGG | - | chr1_1:60560824-60560843 | None:intergenic | 35.0% | |
| TACCTCTTTACAACATGCTT+CGG | + | chr1_1:60560861-60560880 | Msa0033210:CDS | 35.0% | |
| !! | GGGATGACTTTTTCTTTACA+TGG | - | chr1_1:60560889-60560908 | None:intergenic | 35.0% |
| CAAATGAAAAATTGCTCGCT+TGG | + | chr1_1:60560951-60560970 | Msa0033210:CDS | 35.0% | |
| GGTTTCTACTAACCAGAATA+AGG | + | chr1_1:60561031-60561050 | Msa0033210:intron | 35.0% | |
| ! | GTAAATCATGTGCCTTATTC+TGG | - | chr1_1:60561046-60561065 | None:intergenic | 35.0% |
| ACGTGATTTAGCATGCATTA+TGG | + | chr1_1:60561064-60561083 | Msa0033210:intron | 35.0% | |
| AACTTGAGGAACATCTAGAT+AGG | + | chr1_1:60561198-60561217 | Msa0033210:CDS | 35.0% | |
| CATATATCTCACCAGGATAT+CGG | + | chr1_1:60561507-60561526 | Msa0033210:intron | 35.0% | |
| GCCAATCAGGATATAAAATG+AGG | - | chr1_1:60561630-60561649 | None:intergenic | 35.0% | |
| AGGATAACTGAATTAGCACT+TGG | - | chr1_1:60561687-60561706 | None:intergenic | 35.0% | |
| TTATGAAGTAAACAAGAGCG+AGG | - | chr1_1:60561707-60561726 | None:intergenic | 35.0% | |
| !!! | GAAAGAAGGTTTTATTCTCC+TGG | + | chr1_1:60561843-60561862 | Msa0033210:intron | 35.0% |
| AATGGGAATTGTGTTCATAC+TGG | + | chr1_1:60562082-60562101 | Msa0033210:intron | 35.0% | |
| CAGCATATTGCATGTTTACA+AGG | - | chr1_1:60562188-60562207 | None:intergenic | 35.0% | |
| GTAGCCTATTGTTTCATTAG+CGG | + | chr1_1:60562212-60562231 | Msa0033210:intron | 35.0% | |
| TTCACCGCTAATGAAACAAT+AGG | - | chr1_1:60562219-60562238 | None:intergenic | 35.0% | |
| !!! | TTCTTTTCTAAGGTTACCTC+TGG | + | chr1_1:60562339-60562358 | Msa0033210:intron | 35.0% |
| !!! | TCTTTTCTAAGGTTACCTCT+GGG | + | chr1_1:60562340-60562359 | Msa0033210:intron | 35.0% |
| ATCCATACAGATTCAATGCT+GGG | - | chr1_1:60562371-60562390 | None:intergenic | 35.0% | |
| CTGTATGGATGCACATTAAT+TGG | + | chr1_1:60562381-60562400 | Msa0033210:CDS | 35.0% | |
| !!! | TTCCACTTTTTTCAAGGGAA+TGG | + | chr1_1:60562540-60562559 | Msa0033210:intron | 35.0% |
| GTTTGCGAGAAAATGTCTAA+TGG | + | chr1_1:60562564-60562583 | Msa0033210:intron | 35.0% | |
| TCGAGAAGAGCTTCAATATT+GGG | + | chr1_1:60562703-60562722 | Msa0033210:intron | 35.0% | |
| AAATCCCTAAAAGAACACGA+TGG | - | chr1_1:60562863-60562882 | None:intergenic | 35.0% | |
| !! | CAACTTGCTTTTCTAATGGA+TGG | + | chr1_1:60562990-60563009 | Msa0033210:intron | 35.0% |
| GGGATGTGTTATACTGAAAT+TGG | + | chr1_1:60563011-60563030 | Msa0033210:intron | 35.0% | |
| ACGCTCATTATCATAAACAG+GGG | - | chr1_1:60563074-60563093 | None:intergenic | 35.0% | |
| CACGCTCATTATCATAAACA+GGG | - | chr1_1:60563075-60563094 | None:intergenic | 35.0% | |
| AGCGTTAAATATGACAGAAG+CGG | - | chr1_1:60563367-60563386 | None:intergenic | 35.0% | |
| AGGTGAATAGCAAATTACCT+TGG | - | chr1_1:60563746-60563765 | None:intergenic | 35.0% | |
| TTCAGACAAATGCCGTTATT+TGG | + | chr1_1:60564007-60564026 | Msa0033210:intron | 35.0% | |
| ACAAATGCCGTTATTTGGTT+TGG | + | chr1_1:60564012-60564031 | Msa0033210:intron | 35.0% | |
| ACATACGATGTTAGTTGCAT+TGG | - | chr1_1:60564110-60564129 | None:intergenic | 35.0% | |
| ! | ATTTAAGGTCATGGATCTTG+TGG | + | chr1_1:60564714-60564733 | Msa0033210:intron | 35.0% |
| TTGTTGGACTTATGGAAATG+AGG | + | chr1_1:60564878-60564897 | Msa0033210:intron | 35.0% | |
| AACATCTACTAAATGGTTGC+AGG | - | chr1_1:60565423-60565442 | None:intergenic | 35.0% | |
| !! | ACAATTGGTGATGGAAAAGT+AGG | + | chr1_1:60565508-60565527 | Msa0033210:CDS | 35.0% |
| !!! | GCCTGCAATTTTCTAGTTAT+TGG | - | chr1_1:60565535-60565554 | None:intergenic | 35.0% |
| AAAAAGTTGACTGAAGAGTC+GGG | + | chr1_1:60565562-60565581 | Msa0033210:CDS | 35.0% | |
| !!! | GTTTTGAGGTAGTTCTGAAT+TGG | - | chr1_1:60565592-60565611 | None:intergenic | 35.0% |
| GAACTACCTCAAAACTTGAA+AGG | + | chr1_1:60565597-60565616 | Msa0033210:exon | 35.0% | |
| !!! | TGCATACCTTTCAAGTTTTG+AGG | - | chr1_1:60565606-60565625 | None:intergenic | 35.0% |
| AAATTCTTCAACTGTGCAGT+TGG | + | chr1_1:60565706-60565725 | Msa0033210:intron | 35.0% | |
| AATTCTTCAACTGTGCAGTT+GGG | + | chr1_1:60565707-60565726 | Msa0033210:intron | 35.0% | |
| TGGAAATAAGTGAAAATGGC+TGG | + | chr1_1:60565733-60565752 | Msa0033210:three_prime_UTR | 35.0% | |
| ! | TTGATGATCTAGGCTAAGAT+TGG | - | chr1_1:60565772-60565791 | None:intergenic | 35.0% |
| ! | ACTTCATTTACTCTGCCTTT+TGG | + | chr1_1:60565819-60565838 | Msa0033210:three_prime_UTR | 35.0% |
| ! | TTGTTGAGTTTTTGTTCCTG+CGG | + | chr1_1:60565903-60565922 | Msa0033210:three_prime_UTR | 35.0% |
| TACAGAAAGCTACCTAGATA+TGG | + | chr1_1:60565931-60565950 | Msa0033210:three_prime_UTR | 35.0% | |
| TTGACATGTATATCTACAGG+AGG | - | chr1_1:60565980-60565999 | None:intergenic | 35.0% | |
| ACAACGCACTACTGTATACT+TGG | - | chr1_1:60558022-60558041 | None:intergenic | 40.0% | |
| AGACTTGTGCTAAGAGATCT+TGG | - | chr1_1:60558203-60558222 | None:intergenic | 40.0% | |
| !! | GAGAGTACTTCATCTCTGTA+AGG | - | chr1_1:60558314-60558333 | None:intergenic | 40.0% |
| TGTATGCAACAGGAATCTGA+TGG | + | chr1_1:60558415-60558434 | Msa0033210:intron | 40.0% | |
| !! | GGACTTGAAAAGCACTTCTA+AGG | + | chr1_1:60558886-60558905 | Msa0033210:intron | 40.0% |
| GTGGAATTTGAACAAACCGT+TGG | + | chr1_1:60559275-60559294 | Msa0033210:intron | 40.0% | |
| !!! | CCTTTTTTCACTAGATCCTC+CGG | - | chr1_1:60559425-60559444 | None:intergenic | 40.0% |
| AAACCCAACTCAAAGAACGA+TGG | - | chr1_1:60559623-60559642 | None:intergenic | 40.0% | |
| !! | ATCGTTCTTTGAGTTGGGTT+TGG | + | chr1_1:60559622-60559641 | Msa0033210:CDS | 40.0% |
| AGTTCTGCAGCATCAATAAC+AGG | - | chr1_1:60559698-60559717 | None:intergenic | 40.0% | |
| AGAACTTCAAAAAGATCCCG+AGG | + | chr1_1:60559712-60559731 | Msa0033210:CDS | 40.0% | |
| CAAAGAGGAATCAGAATAGG+CGG | + | chr1_1:60559829-60559848 | Msa0033210:intron | 40.0% | |
| ATTGCCATTCTCTTCCCAAA+GGG | - | chr1_1:60559873-60559892 | None:intergenic | 40.0% | |
| AATTGCCATTCTCTTCCCAA+AGG | - | chr1_1:60559874-60559893 | None:intergenic | 40.0% | |
| ! | AATTTGCAGGCTACTTTACG+GGG | + | chr1_1:60560207-60560226 | Msa0033210:intron | 40.0% |
| !!! | CACAAGCCATCTATTGGTTT+TGG | - | chr1_1:60560449-60560468 | None:intergenic | 40.0% |
| CAAAACCAATAGATGGCTTG+TGG | + | chr1_1:60560447-60560466 | Msa0033210:CDS | 40.0% | |
| TACACCATTATACCACCAAG+GGG | - | chr1_1:60560474-60560493 | None:intergenic | 40.0% | |
| GTACACCATTATACCACCAA+GGG | - | chr1_1:60560475-60560494 | None:intergenic | 40.0% | |
| TGTACACCATTATACCACCA+AGG | - | chr1_1:60560476-60560495 | None:intergenic | 40.0% | |
| GGAACAAAGAAAGGATACTG+AGG | + | chr1_1:60560514-60560533 | Msa0033210:CDS | 40.0% | |
| TTTAACGGGAACTAAACGGA+AGG | - | chr1_1:60560561-60560580 | None:intergenic | 40.0% | |
| ! | TGACCTGGACTTCTTTTAAC+GGG | - | chr1_1:60560575-60560594 | None:intergenic | 40.0% |
| ! | GTACATGGAAAGAAAGCACA+GGG | - | chr1_1:60560713-60560732 | None:intergenic | 40.0% |
| ! | TGTACATGGAAAGAAAGCAC+AGG | - | chr1_1:60560714-60560733 | None:intergenic | 40.0% |
| GAAAAGGGAAATGGCTGAAA+AGG | - | chr1_1:60560815-60560834 | None:intergenic | 40.0% | |
| TTTCATTTGCAGGAACTGGA+AGG | - | chr1_1:60560940-60560959 | None:intergenic | 40.0% | |
| ! | GCGAGCAATTTTTCATTTGC+AGG | - | chr1_1:60560950-60560969 | None:intergenic | 40.0% |
| GTGTTTGATTCAGTTGTCCA+AGG | + | chr1_1:60561125-60561144 | Msa0033210:CDS | 40.0% | |
| TTTGATTCAGTTGTCCAAGG+TGG | + | chr1_1:60561128-60561147 | Msa0033210:CDS | 40.0% | |
| TTTAGCTGAATCCGATATCC+TGG | - | chr1_1:60561521-60561540 | None:intergenic | 40.0% | |
| ATCGGATTCAGCTAAAGCTT+TGG | + | chr1_1:60561525-60561544 | Msa0033210:CDS | 40.0% | |
| AGATGAACAGAAGCCATCTT+CGG | - | chr1_1:60561586-60561605 | None:intergenic | 40.0% | |
| CATCAAACACAAAGCCAATC+AGG | - | chr1_1:60561643-60561662 | None:intergenic | 40.0% | |
| ! | GGCTTTGTGTTTGATGTTTC+TGG | + | chr1_1:60561647-60561666 | Msa0033210:intron | 40.0% |
| TGTTAGAGAAAGTCGGATGT+GGG | - | chr1_1:60561819-60561838 | None:intergenic | 40.0% | |
| TTCCTCGTGTTAGAGAAAGT+CGG | - | chr1_1:60561826-60561845 | None:intergenic | 40.0% | |
| TTCTCTAACACGAGGAAAGA+AGG | + | chr1_1:60561829-60561848 | Msa0033210:CDS | 40.0% | |
| CATCCATACAGATTCAATGC+TGG | - | chr1_1:60562372-60562391 | None:intergenic | 40.0% | |
| CACCATTCCCTTGAAAAAAG+TGG | - | chr1_1:60562545-60562564 | None:intergenic | 40.0% | |
| ACTCATTGGATTCTGGTAGA+TGG | - | chr1_1:60562601-60562620 | None:intergenic | 40.0% | |
| ATCTACCAGAATCCAATGAG+TGG | + | chr1_1:60562600-60562619 | Msa0033210:intron | 40.0% | |
| TCTACCAGAATCCAATGAGT+GGG | + | chr1_1:60562601-60562620 | Msa0033210:intron | 40.0% | |
| ! | TTTTCCCACTCATTGGATTC+TGG | - | chr1_1:60562608-60562627 | None:intergenic | 40.0% |
| !!! | AGGTTGTTTTTCCCACTCAT+TGG | - | chr1_1:60562615-60562634 | None:intergenic | 40.0% |
| CAATATTGAAGCTCTTCTCG+AGG | - | chr1_1:60562704-60562723 | None:intergenic | 40.0% | |
| CTCGAGAAGAGCTTCAATAT+TGG | + | chr1_1:60562702-60562721 | Msa0033210:intron | 40.0% | |
| ! | AAGCTCCATCGTGTTCTTTT+AGG | + | chr1_1:60562855-60562874 | Msa0033210:intron | 40.0% |
| ! | AGCTCCATCGTGTTCTTTTA+GGG | + | chr1_1:60562856-60562875 | Msa0033210:intron | 40.0% |
| ! | AAGCACTGCGTAATTCATCA+AGG | - | chr1_1:60563038-60563057 | None:intergenic | 40.0% |
| CGCTCATTATCATAAACAGG+GGG | - | chr1_1:60563073-60563092 | None:intergenic | 40.0% | |
| CCACGCTCATTATCATAAAC+AGG | - | chr1_1:60563076-60563095 | None:intergenic | 40.0% | |
| ! | CCTGTTTATGATAATGAGCG+TGG | + | chr1_1:60563073-60563092 | Msa0033210:CDS | 40.0% |
| ! | TCCTTATATTTGAGACCGGA+GGG | - | chr1_1:60563300-60563319 | None:intergenic | 40.0% |
| ! | TTCCTTATATTTGAGACCGG+AGG | - | chr1_1:60563301-60563320 | None:intergenic | 40.0% |
| AGTTCTCACCATGGGTAATT+TGG | + | chr1_1:60563446-60563465 | Msa0033210:intron | 40.0% | |
| TTGCTTATATATGAGACCGG+TGG | + | chr1_1:60563550-60563569 | Msa0033210:intron | 40.0% | |
| TGCTTATATATGAGACCGGT+GGG | + | chr1_1:60563551-60563570 | Msa0033210:intron | 40.0% | |
| TGATTAAAAGCTACTCCCAC+CGG | - | chr1_1:60563569-60563588 | None:intergenic | 40.0% | |
| GTATCTTTGAGTCCAAACTC+TGG | - | chr1_1:60563693-60563712 | None:intergenic | 40.0% | |
| ACCTGCACCAAACCAAATAA+CGG | - | chr1_1:60564022-60564041 | None:intergenic | 40.0% | |
| CGATGCAATAATGCTTGACA+AGG | + | chr1_1:60564066-60564085 | Msa0033210:CDS | 40.0% | |
| GCAATAATGCTTGACAAGGA+TGG | + | chr1_1:60564070-60564089 | Msa0033210:CDS | 40.0% | |
| ! | AGAATCAACTCCTTGCTATC+TGG | - | chr1_1:60564200-60564219 | None:intergenic | 40.0% |
| ! | GATAGCAAGGAGTTGATTCT+TGG | + | chr1_1:60564200-60564219 | Msa0033210:intron | 40.0% |
| ATTTGAGTAGCAAGCTGAGA+GGG | - | chr1_1:60564340-60564359 | None:intergenic | 40.0% | |
| GGGGCAAAAAGAAACACAAA+AGG | - | chr1_1:60564411-60564430 | None:intergenic | 40.0% | |
| ! | TTTTGGTACTTGCGGAACTA+AGG | + | chr1_1:60564682-60564701 | Msa0033210:intron | 40.0% |
| !! | CTAAGGTGTCGCACAATTTA+AGG | + | chr1_1:60564699-60564718 | Msa0033210:intron | 40.0% |
| ! | TGTCGCACAATTTAAGGTCA+TGG | + | chr1_1:60564705-60564724 | Msa0033210:intron | 40.0% |
| TTATTGGTGAACCTCATCTG+CGG | - | chr1_1:60564794-60564813 | None:intergenic | 40.0% | |
| TTTGAACCACACTGAGATCA+CGG | + | chr1_1:60564940-60564959 | Msa0033210:intron | 40.0% | |
| GTAAGAACTCGCAAGGTATA+AGG | - | chr1_1:60565346-60565365 | None:intergenic | 40.0% | |
| AACAAGTGTAAGAACTCGCA+AGG | - | chr1_1:60565353-60565372 | None:intergenic | 40.0% | |
| !! | TACTTTTGTTTGCCACTTCC+AGG | + | chr1_1:60565465-60565484 | Msa0033210:intron | 40.0% |
| TTCCATAGCTTAGGCGAAGA+TGG | + | chr1_1:60558148-60558167 | Msa0033210:exon | 45.0% | |
| AGGTGGAAGTGATTCACTCA+TGG | + | chr1_1:60558171-60558190 | Msa0033210:CDS | 45.0% | |
| GAGAATAGAGAGGCTCATCA+AGG | - | chr1_1:60558262-60558281 | None:intergenic | 45.0% | |
| CGGAGGAAATGAGAATAGAG+AGG | - | chr1_1:60558272-60558291 | None:intergenic | 45.0% | |
| TCTCATTTCCTCCGTGTTAG+TGG | + | chr1_1:60558278-60558297 | Msa0033210:CDS | 45.0% | |
| ATTGAGTCACGTATGACGTC+AGG | + | chr1_1:60558988-60559007 | Msa0033210:intron | 45.0% | |
| ! | TCCACTGTTGTATGGTGCTA+TGG | - | chr1_1:60559260-60559279 | None:intergenic | 45.0% |
| CCGGAGGATCTAGTGAAAAA+AGG | + | chr1_1:60559422-60559441 | Msa0033210:CDS | 45.0% | |
| ! | CCTCCATCGTTCTTTGAGTT+GGG | + | chr1_1:60559617-60559636 | Msa0033210:CDS | 45.0% |
| !! | GTTCTTTGAGTTGGGTTTGG+CGG | + | chr1_1:60559625-60559644 | Msa0033210:CDS | 45.0% |
| TCTGCAGCATCAATAACAGG+CGG | - | chr1_1:60559695-60559714 | None:intergenic | 45.0% | |
| TCTAGACCCTTGGTTGACTA+AGG | + | chr1_1:60559915-60559934 | Msa0033210:intron | 45.0% | |
| ! | CTGAGCATTGCTGGTTGAAA+AGG | - | chr1_1:60560255-60560274 | None:intergenic | 45.0% |
| ! | CTTTTCAACCAGCAATGCTC+AGG | + | chr1_1:60560253-60560272 | Msa0033210:CDS | 45.0% |
| ! | ACTCTATACCTGAGCATTGC+TGG | - | chr1_1:60560264-60560283 | None:intergenic | 45.0% |
| AAACTTGTCAGTTGGGAAGC+AGG | + | chr1_1:60560422-60560441 | Msa0033210:intron | 45.0% | |
| GCAGGTCCAAAACCAATAGA+TGG | + | chr1_1:60560440-60560459 | Msa0033210:CDS | 45.0% | |
| GTTCCCGTTAAAAGAAGTCC+AGG | + | chr1_1:60560569-60560588 | Msa0033210:intron | 45.0% | |
| ACAACACAGCATAACTCACC+AGG | - | chr1_1:60560787-60560806 | None:intergenic | 45.0% | |
| AAGCAAAGGAGAGCTCAGAA+GGG | - | chr1_1:60560909-60560928 | None:intergenic | 45.0% | |
| ATTTGCAGGAACTGGAAGGT+CGG | - | chr1_1:60560936-60560955 | None:intergenic | 45.0% | |
| GAAAAATTGCTCGCTTGGGT+CGG | + | chr1_1:60560956-60560975 | Msa0033210:CDS | 45.0% | |
| AAATGTTCCATCGCGAGATG+AGG | + | chr1_1:60561555-60561574 | Msa0033210:CDS | 45.0% | |
| GTGTTAGAGAAAGTCGGATG+TGG | - | chr1_1:60561820-60561839 | None:intergenic | 45.0% | |
| ATCCGACTTTCTCTAACACG+AGG | + | chr1_1:60561821-60561840 | Msa0033210:CDS | 45.0% | |
| ! | AGCCCAGCATTGAATCTGTA+TGG | + | chr1_1:60562366-60562385 | Msa0033210:CDS | 45.0% |
| ATAAACAGGGGGCTTCCATT+CGG | - | chr1_1:60563062-60563081 | None:intergenic | 45.0% | |
| ATTGGCATGGGATTGTTGCT+TGG | + | chr1_1:60563266-60563285 | Msa0033210:intron | 45.0% | |
| ! | TTGGCATGGGATTGTTGCTT+GGG | + | chr1_1:60563267-60563286 | Msa0033210:intron | 45.0% |
| TCCCTCCGGTCTCAAATATA+AGG | + | chr1_1:60563296-60563315 | Msa0033210:intron | 45.0% | |
| AGTGGAACAAGTTCTCACCA+TGG | + | chr1_1:60563437-60563456 | Msa0033210:intron | 45.0% | |
| GTGGAACAAGTTCTCACCAT+GGG | + | chr1_1:60563438-60563457 | Msa0033210:intron | 45.0% | |
| TGGCGAGTATGTTATTGAGG+AGG | - | chr1_1:60563726-60563745 | None:intergenic | 45.0% | |
| CCTTGGCGAGTATGTTATTG+AGG | - | chr1_1:60563729-60563748 | None:intergenic | 45.0% | |
| CCTCAATAACATACTCGCCA+AGG | + | chr1_1:60563726-60563745 | Msa0033210:CDS | 45.0% | |
| !! | TTTGGTTTGGTGCAGGTTGA+AGG | + | chr1_1:60564025-60564044 | Msa0033210:intron | 45.0% |
| CATTTGAGTAGCAAGCTGAG+AGG | - | chr1_1:60564341-60564360 | None:intergenic | 45.0% | |
| !! | CTCTCAGCTTGCTACTCAAA+TGG | + | chr1_1:60564339-60564358 | Msa0033210:intron | 45.0% |
| TCAGTTGCAAGCGAAACTTG+GGG | - | chr1_1:60564430-60564449 | None:intergenic | 45.0% | |
| GTCAGTTGCAAGCGAAACTT+GGG | - | chr1_1:60564431-60564450 | None:intergenic | 45.0% | |
| TGTCAGTTGCAAGCGAAACT+TGG | - | chr1_1:60564432-60564451 | None:intergenic | 45.0% | |
| GTTTCGCTTGCAACTGACAA+TGG | + | chr1_1:60564433-60564452 | Msa0033210:intron | 45.0% | |
| GGAAGACAGTAATCAGCATG+TGG | - | chr1_1:60564536-60564555 | None:intergenic | 45.0% | |
| ! | CATGCTGATTACTGTCTTCC+TGG | + | chr1_1:60564536-60564555 | Msa0033210:CDS | 45.0% |
| CCAATAGAGAGAGGGAGAAT+TGG | - | chr1_1:60565229-60565248 | None:intergenic | 45.0% | |
| CCAATTCTCCCTCTCTCTAT+TGG | + | chr1_1:60565226-60565245 | Msa0033210:intron | 45.0% | |
| TAACTAGAAGACTGCCTTGC+AGG | + | chr1_1:60565278-60565297 | Msa0033210:intron | 45.0% | |
| GTATGGACGACAGGAACAAT+GGG | + | chr1_1:60565300-60565319 | Msa0033210:CDS | 45.0% | |
| AACAATGGGAGAACTAAGCC+CGG | + | chr1_1:60565314-60565333 | Msa0033210:CDS | 45.0% | |
| ! | CAAGGTATAAGGCACTTACC+GGG | - | chr1_1:60565335-60565354 | None:intergenic | 45.0% |
| ! | GCAAGGTATAAGGCACTTAC+CGG | - | chr1_1:60565336-60565355 | None:intergenic | 45.0% |
| TTCCAGGTAGTGAAGGTTGA+TGG | + | chr1_1:60565481-60565500 | Msa0033210:intron | 45.0% | |
| ! | TCCAGGTAGTGAAGGTTGAT+GGG | + | chr1_1:60565482-60565501 | Msa0033210:intron | 45.0% |
| ! | TAGGCTAAGATTGGTAGCAG+CGG | - | chr1_1:60565763-60565782 | None:intergenic | 45.0% |
| AGCTTTCTGTATTAGACCGC+AGG | - | chr1_1:60565922-60565941 | None:intergenic | 45.0% | |
| CTCCATCTTCGCCTAAGCTA+TGG | - | chr1_1:60558153-60558172 | None:intergenic | 50.0% | |
| CATAGCTTAGGCGAAGATGG+AGG | + | chr1_1:60558151-60558170 | Msa0033210:exon | 50.0% | |
| GTCGATCGAAGCCACTAACA+CGG | - | chr1_1:60558292-60558311 | None:intergenic | 50.0% | |
| GCCATAGCACCATACAACAG+TGG | + | chr1_1:60559256-60559275 | Msa0033210:intron | 50.0% | |
| !! | ACAAAGGGTGCTTGGTTTGC+CGG | + | chr1_1:60559403-60559422 | Msa0033210:CDS | 50.0% |
| GGCACAACCTTGTCAAAGGA+CGG | - | chr1_1:60559599-60559618 | None:intergenic | 50.0% | |
| ! | TGGAGGCACAACCTTGTCAA+AGG | - | chr1_1:60559603-60559622 | None:intergenic | 50.0% |
| GCCTCCATCGTTCTTTGAGT+TGG | + | chr1_1:60559616-60559635 | Msa0033210:CDS | 50.0% | |
| CCCAACTCAAAGAACGATGG+AGG | - | chr1_1:60559620-60559639 | None:intergenic | 50.0% | |
| ATATGCATCTGCCTGCCCTT+TGG | + | chr1_1:60559855-60559874 | Msa0033210:intron | 50.0% | |
| TATGCATCTGCCTGCCCTTT+GGG | + | chr1_1:60559856-60559875 | Msa0033210:intron | 50.0% | |
| TTAGCAGCTCTCTAGACCCT+TGG | + | chr1_1:60559905-60559924 | Msa0033210:intron | 50.0% | |
| ACGGGGTCTCTGTGATGATT+TGG | + | chr1_1:60560224-60560243 | Msa0033210:CDS | 50.0% | |
| ! | CTTATGATTGGTTGGGGCCT+GGG | + | chr1_1:60560755-60560774 | Msa0033210:intron | 50.0% |
| ! | TTATGATTGGTTGGGGCCTG+GGG | + | chr1_1:60560756-60560775 | Msa0033210:intron | 50.0% |
| CGCCGAAGCATGTTGTAAAG+AGG | - | chr1_1:60560866-60560885 | None:intergenic | 50.0% | |
| GAAGCAAAGGAGAGCTCAGA+AGG | - | chr1_1:60560910-60560929 | None:intergenic | 50.0% | |
| TTTGCAGGAACTGGAAGGTC+GGG | - | chr1_1:60560935-60560954 | None:intergenic | 50.0% | |
| AGTACCTTAGCACTCTCACG+TGG | - | chr1_1:60560995-60561014 | None:intergenic | 50.0% | |
| AGATGAGGTGAGTCCGAAGA+TGG | + | chr1_1:60561570-60561589 | Msa0033210:intron | 50.0% | |
| ATTACGCAGTGCTTGCCGAA+TGG | + | chr1_1:60563044-60563063 | Msa0033210:intron | 50.0% | |
| TGCTTGGGATATACTCCCTC+CGG | + | chr1_1:60563282-60563301 | Msa0033210:intron | 50.0% | |
| !! | GCCGTTATTTGGTTTGGTGC+AGG | + | chr1_1:60564018-60564037 | Msa0033210:intron | 50.0% |
| ACTAGGGTTGCCAGATAGCA+AGG | + | chr1_1:60564187-60564206 | Msa0033210:intron | 50.0% | |
| CAGCATGTGGCGTCAAAACA+CGG | - | chr1_1:60564523-60564542 | None:intergenic | 50.0% | |
| ACAGTTGCTCGAGTAATGCC+AGG | - | chr1_1:60564557-60564576 | None:intergenic | 50.0% | |
| GGTCATGGATCTTGTGGTGA+AGG | + | chr1_1:60564720-60564739 | Msa0033210:intron | 50.0% | |
| ! | AGAAGTGCATACCGCAGATG+AGG | + | chr1_1:60564780-60564799 | Msa0033210:CDS | 50.0% |
| AGAAGACTGCCTTGCAGGTA+TGG | + | chr1_1:60565283-60565302 | Msa0033210:intron | 50.0% | |
| GGTATGGACGACAGGAACAA+TGG | + | chr1_1:60565299-60565318 | Msa0033210:intron | 50.0% | |
| ! | TTGCCACTTCCAGGTAGTGA+AGG | + | chr1_1:60565474-60565493 | Msa0033210:intron | 50.0% |
| CAACCTTCACTACCTGGAAG+TGG | - | chr1_1:60565480-60565499 | None:intergenic | 50.0% | |
| !! | AAGGTTGATGGGCGCACAAT+TGG | + | chr1_1:60565493-60565512 | Msa0033210:CDS | 50.0% |
| TCAACTGTGCAGTTGGGACT+TGG | + | chr1_1:60565713-60565732 | Msa0033210:intron | 50.0% | |
| AGCTTAGGCGAAGATGGAGG+TGG | + | chr1_1:60558154-60558173 | Msa0033210:exon | 55.0% | |
| GATCGAAGCCACTAACACGG+AGG | - | chr1_1:60558289-60558308 | None:intergenic | 55.0% | |
| ! | ATGTGCTGCTGCTACATGGC+CGG | - | chr1_1:60558957-60558976 | None:intergenic | 55.0% |
| ! | CACCATGTGCTGCTGCTACA+TGG | - | chr1_1:60558961-60558980 | None:intergenic | 55.0% |
| GTCACGTATGACGTCAGGAC+TGG | + | chr1_1:60558993-60559012 | Msa0033210:intron | 55.0% | |
| CAACCTTGTCAAAGGACGGC+TGG | - | chr1_1:60559595-60559614 | None:intergenic | 55.0% | |
| CCATTCTCTTCCCAAAGGGC+AGG | - | chr1_1:60559869-60559888 | None:intergenic | 55.0% | |
| ! | CCTGCCCTTTGGGAAGAGAA+TGG | + | chr1_1:60559866-60559885 | Msa0033210:intron | 55.0% |
| ! | TGGGCCCCTTGGTGGTATAA+TGG | + | chr1_1:60560467-60560486 | Msa0033210:CDS | 55.0% |
| CCAGGCCCCAACCAATCATA+AGG | - | chr1_1:60560757-60560776 | None:intergenic | 55.0% | |
| ! | CCTTATGATTGGTTGGGGCC+TGG | + | chr1_1:60560754-60560773 | Msa0033210:intron | 55.0% |
| ! | TATGATTGGTTGGGGCCTGG+GGG | + | chr1_1:60560757-60560776 | Msa0033210:intron | 55.0% |
| AACTCACCAGGATTTCCCCC+AGG | - | chr1_1:60560775-60560794 | None:intergenic | 55.0% | |
| TTGCAGGAACTGGAAGGTCG+GGG | - | chr1_1:60560934-60560953 | None:intergenic | 55.0% | |
| !! | TGTGCCACGTGAGAGTGCTA+AGG | + | chr1_1:60560988-60561007 | Msa0033210:CDS | 55.0% |
| AGTTGTCCAAGGTGGCGACT+CGG | + | chr1_1:60561136-60561155 | Msa0033210:CDS | 55.0% | |
| CTGCGGTATGCACTTCTGAC+AGG | - | chr1_1:60564777-60564796 | None:intergenic | 55.0% | |
| CGTGAACCGTGATCTCAGTG+TGG | - | chr1_1:60564949-60564968 | None:intergenic | 55.0% | |
| TCCTGTCGTCCATACCTGCA+AGG | - | chr1_1:60565295-60565314 | None:intergenic | 55.0% | |
| GCCCATCAACCTTCACTACC+TGG | - | chr1_1:60565486-60565505 | None:intergenic | 55.0% | |
| GATGGGCGCACAATTGGTGA+TGG | + | chr1_1:60565499-60565518 | Msa0033210:CDS | 55.0% | |
| GGCCATGTAGCAGCAGCACA+TGG | + | chr1_1:60558956-60558975 | Msa0033210:intron | 60.0% | |
| !! | AAGGGTGCTTGGTTTGCCGG+AGG | + | chr1_1:60559406-60559425 | Msa0033210:CDS | 60.0% |
| CCTTGTCAAAGGACGGCTGG+AGG | - | chr1_1:60559592-60559611 | None:intergenic | 60.0% | |
| CCTCCAGCCGTCCTTTGACA+AGG | + | chr1_1:60559589-60559608 | Msa0033210:intron | 60.0% | |
| GGGGCCCACAAGCCATCTAT+TGG | - | chr1_1:60560455-60560474 | None:intergenic | 60.0% | |
| ! | TAGATGGCTTGTGGGCCCCT+TGG | + | chr1_1:60560456-60560475 | Msa0033210:CDS | 60.0% |
| TGCAGGAACTGGAAGGTCGG+GGG | - | chr1_1:60560933-60560952 | None:intergenic | 60.0% | |
| !! | TCCAAGGTGGCGACTCGGTT+TGG | + | chr1_1:60561141-60561160 | Msa0033210:CDS | 60.0% |
| !! | CCAAGGTGGCGACTCGGTTT+GGG | + | chr1_1:60561142-60561161 | Msa0033210:CDS | 60.0% |
| GGACTCACCTCATCTCGCGA+TGG | - | chr1_1:60561565-60561584 | None:intergenic | 60.0% | |
| CAATGCTGGGCTCATCCCAG+AGG | - | chr1_1:60562358-60562377 | None:intergenic | 60.0% | |
| TTGTAACTGCCACCACGCGC+AGG | + | chr1_1:60563104-60563123 | Msa0033210:CDS | 60.0% | |
| ! | GTTTGGTGAGTTCCTGCGCG+TGG | - | chr1_1:60563119-60563138 | None:intergenic | 60.0% |
| GCCTTGCAGGTATGGACGAC+AGG | + | chr1_1:60565291-60565310 | Msa0033210:intron | 60.0% | |
| ! | ATGGCTTGTGGGCCCCTTGG+TGG | + | chr1_1:60560459-60560478 | Msa0033210:CDS | 65.0% |
| TTGGGGCCTGGGGGAAATCC+TGG | + | chr1_1:60560766-60560785 | Msa0033210:intron | 65.0% | |
| GGAAGGTCGGGGGGAAGCAA+AGG | - | chr1_1:60560923-60560942 | None:intergenic | 65.0% | |
| GCAGGAACTGGAAGGTCGGG+GGG | - | chr1_1:60560932-60560951 | None:intergenic | 65.0% | |
| CCCAAACCGAGTCGCCACCT+TGG | - | chr1_1:60561145-60561164 | None:intergenic | 65.0% | |
| !! | AGGTGGCGACTCGGTTTGGG+AGG | + | chr1_1:60561145-60561164 | Msa0033210:CDS | 65.0% |
| !! | GGTGGCGACTCGGTTTGGGA+GGG | + | chr1_1:60561146-60561165 | Msa0033210:CDS | 65.0% |
| TGGTGAGTTCCTGCGCGTGG+TGG | - | chr1_1:60563116-60563135 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 60557990 | 60566041 | 60557990 | ID=Msa0033210;Name=Msa0033210 |
| chr1_1 | mRNA | 60557990 | 60566041 | 60557990 | ID=Msa0033210-mRNA-1;Parent=Msa0033210;Name=Msa0033210-mRNA-1;_AED=0.14;_eAED=0.14;_QI=177|1|1|1|0.77|0.84|19|320|554 |
| chr1_1 | exon | 60557990 | 60558340 | 60557990 | ID=Msa0033210-mRNA-1:exon:18940;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60558427 | 60558498 | 60558427 | ID=Msa0033210-mRNA-1:exon:18941;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60559392 | 60559484 | 60559392 | ID=Msa0033210-mRNA-1:exon:18942;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60559596 | 60559733 | 60559596 | ID=Msa0033210-mRNA-1:exon:18943;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60560216 | 60560274 | 60560216 | ID=Msa0033210-mRNA-1:exon:18944;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60560433 | 60560535 | 60560433 | ID=Msa0033210-mRNA-1:exon:18945;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60560821 | 60561009 | 60560821 | ID=Msa0033210-mRNA-1:exon:18946;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60561119 | 60561219 | 60561119 | ID=Msa0033210-mRNA-1:exon:18947;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60561522 | 60561576 | 60561522 | ID=Msa0033210-mRNA-1:exon:18948;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60561764 | 60561850 | 60561764 | ID=Msa0033210-mRNA-1:exon:18949;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60562351 | 60562402 | 60562351 | ID=Msa0033210-mRNA-1:exon:18950;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60563053 | 60563138 | 60563053 | ID=Msa0033210-mRNA-1:exon:18951;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60563694 | 60563747 | 60563694 | ID=Msa0033210-mRNA-1:exon:18952;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60564040 | 60564123 | 60564040 | ID=Msa0033210-mRNA-1:exon:18953;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60564503 | 60564574 | 60564503 | ID=Msa0033210-mRNA-1:exon:18954;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60564721 | 60564801 | 60564721 | ID=Msa0033210-mRNA-1:exon:18955;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60565300 | 60565335 | 60565300 | ID=Msa0033210-mRNA-1:exon:18956;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60565487 | 60565618 | 60565487 | ID=Msa0033210-mRNA-1:exon:18957;Parent=Msa0033210-mRNA-1 |
| chr1_1 | exon | 60565725 | 60566041 | 60565725 | ID=Msa0033210-mRNA-1:exon:18958;Parent=Msa0033210-mRNA-1 |
| chr1_1 | five_prime_UTR | 60557990 | 60558166 | 60557990 | ID=Msa0033210-mRNA-1:five_prime_utr;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60558167 | 60558340 | 60558167 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60558427 | 60558498 | 60558427 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60559392 | 60559484 | 60559392 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60559596 | 60559733 | 60559596 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60560216 | 60560274 | 60560216 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60560433 | 60560535 | 60560433 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60560821 | 60561009 | 60560821 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60561119 | 60561219 | 60561119 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60561522 | 60561576 | 60561522 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60561764 | 60561850 | 60561764 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60562351 | 60562402 | 60562351 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60563053 | 60563138 | 60563053 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60563694 | 60563747 | 60563694 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60564040 | 60564123 | 60564040 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60564503 | 60564574 | 60564503 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60564721 | 60564801 | 60564721 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60565300 | 60565335 | 60565300 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | CDS | 60565487 | 60565615 | 60565487 | ID=Msa0033210-mRNA-1:cds;Parent=Msa0033210-mRNA-1 |
| chr1_1 | three_prime_UTR | 60565616 | 60565618 | 60565616 | ID=Msa0033210-mRNA-1:three_prime_utr;Parent=Msa0033210-mRNA-1 |
| chr1_1 | three_prime_UTR | 60565725 | 60566041 | 60565725 | ID=Msa0033210-mRNA-1:three_prime_utr;Parent=Msa0033210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
