AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0036320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036320 MtrunA17_Chr1g0198531 91.101 427 9 3 324 721 11 437 0.0 781
Msa0036320 MtrunA17_Chr1g0198531 82.336 351 38 2 1 327 81 431 0.0 580
Msa0036320 MtrunA17_Chr1g0198541 81.030 427 52 3 324 721 11 437 0.0 663
Msa0036320 MtrunA17_Chr1g0198541 91.354 347 6 2 1 323 81 427 0.0 595
Msa0036320 MtrunA17_Chr5g0422741 76.538 439 74 3 312 721 1 439 0.0 649
Msa0036320 MtrunA17_Chr5g0422741 76.420 352 59 2 1 328 83 434 0.0 523
Msa0036320 MtrunA17_Chr6g0458931 53.793 435 168 4 320 721 21 455 2.65e-168 491
Msa0036320 MtrunA17_Chr6g0458931 56.484 347 127 2 1 323 99 445 9.44e-139 415
Msa0036320 MtrunA17_Chr2g0331721 54.378 434 164 5 322 721 28 461 5.90e-160 470
Msa0036320 MtrunA17_Chr2g0331721 56.897 348 125 3 1 323 104 451 3.47e-131 396
Msa0036320 MtrunA17_Chr8g0376991 51.276 431 177 4 324 721 6 436 7.56e-157 461
Msa0036320 MtrunA17_Chr8g0376991 52.260 354 145 2 1 330 80 433 3.01e-128 387
Msa0036320 MtrunA17_Chr7g0230011 55.760 434 159 4 321 721 10 443 4.24e-155 457
Msa0036320 MtrunA17_Chr7g0230011 58.501 347 120 2 1 323 87 433 8.89e-125 379
Msa0036320 MtrunA17_Chr6g0459021 54.060 431 165 4 324 721 17 447 4.34e-150 444
Msa0036320 MtrunA17_Chr6g0459021 55.620 347 130 2 1 323 91 437 1.25e-117 360
Msa0036320 MtrunA17_Chr6g0458921 54.545 429 164 4 323 721 1 428 1.06e-148 440
Msa0036320 MtrunA17_Chr6g0458921 55.747 348 129 3 1 323 71 418 3.79e-114 351
Msa0036320 MtrunA17_Chr6g0459031 53.846 429 167 4 323 721 1 428 2.79e-146 434
Msa0036320 MtrunA17_Chr6g0459031 54.885 348 132 3 1 323 71 418 3.33e-112 346
Msa0036320 MtrunA17_Chr4g0057851 52.289 415 169 3 334 719 7 421 2.90e-145 431
Msa0036320 MtrunA17_Chr4g0057851 50.282 354 152 2 1 330 67 420 4.40e-120 366
Msa0036320 MtrunA17_Chr2g0328081 53.380 429 169 4 323 721 1 428 1.46e-136 409
Msa0036320 MtrunA17_Chr2g0328081 53.448 348 137 3 1 323 71 418 1.01e-106 332
Msa0036320 MtrunA17_Chr3g0122921 47.597 437 176 6 320 721 10 428 4.07e-136 407
Msa0036320 MtrunA17_Chr3g0122921 48.127 347 138 3 1 323 90 418 1.76e-105 328
Msa0036320 MtrunA17_Chr6g0459011 54.198 393 151 3 353 716 1 393 9.35e-133 397
Msa0036320 MtrunA17_Chr6g0459011 54.755 347 133 2 1 323 42 388 1.92e-119 363
Msa0036320 MtrunA17_Chr6g0459001 57.333 300 115 4 323 609 3 302 1.25e-113 351
Msa0036320 MtrunA17_Chr6g0459001 49.227 388 132 3 1 323 79 466 2.17e-106 332
Msa0036320 MtrunA17_Chr6g0459001 57.407 108 46 0 614 721 369 476 1.53e-22 101
Msa0036320 MtrunA17_Chr3g0077651 46.651 418 190 5 337 721 52 469 3.10e-109 340
Msa0036320 MtrunA17_Chr3g0077651 48.148 351 154 4 1 323 109 459 3.25e-90 290
Msa0036320 MtrunA17_Chr2g0281341 33.708 445 251 10 316 720 77 517 8.25e-67 229
Msa0036320 MtrunA17_Chr2g0281341 32.603 365 210 7 1 330 152 515 2.12e-54 195
Msa0036320 MtrunA17_Chr3g0143701 33.186 452 252 10 319 721 59 509 6.68e-65 224
Msa0036320 MtrunA17_Chr3g0143701 34.167 360 199 8 1 323 141 499 2.49e-57 203
Msa0036320 MtrunA17_Chr5g0406331 33.333 402 210 11 337 689 86 478 8.59e-55 196
Msa0036320 MtrunA17_Chr5g0406331 32.743 339 187 8 1 301 143 478 2.32e-48 178
Msa0036320 MtrunA17_Chr5g0406351 32.009 428 244 10 337 720 107 531 6.00e-54 194
Msa0036320 MtrunA17_Chr5g0406351 31.492 362 210 7 1 325 164 524 4.30e-47 175
Msa0036320 MtrunA17_Chr4g0038711 29.452 438 253 11 329 718 67 496 3.38e-45 169
Msa0036320 MtrunA17_Chr4g0038711 28.610 367 217 8 1 324 127 491 9.01e-40 153
Msa0036320 MtrunA17_Chr8g0387941 27.174 460 253 14 324 720 7 447 2.75e-38 148
Msa0036320 MtrunA17_Chr8g0387941 26.781 351 204 11 7 319 92 427 2.86e-22 100
Msa0036320 MtrunA17_Chr4g0027241 26.932 427 258 13 339 720 42 459 3.04e-36 142
Msa0036320 MtrunA17_Chr4g0027241 28.190 337 195 12 2 300 100 427 8.18e-25 108
Msa0036320 MtrunA17_Chr1g0198081 26.932 427 260 11 339 721 61 479 5.12e-36 142
Msa0036320 MtrunA17_Chr1g0198081 27.198 364 221 10 2 330 119 473 1.03e-24 108
Msa0036320 MtrunA17_Chr3g0130641 27.511 458 267 13 323 718 17 471 3.17e-33 134
Msa0036320 MtrunA17_Chr3g0130641 30.189 318 175 7 61 335 163 476 1.48e-31 129
Msa0036320 MtrunA17_Chr3g0140761 29.688 320 176 9 62 333 164 482 3.02e-32 131
Msa0036320 MtrunA17_Chr3g0140761 26.477 457 262 15 330 717 24 475 1.40e-30 126
Msa0036320 MtrunA17_Chr3g0125091 26.856 458 262 14 323 713 18 469 6.31e-32 130
Msa0036320 MtrunA17_Chr3g0125091 28.664 307 172 7 61 323 164 467 2.32e-29 122
Msa0036320 MtrunA17_Chr3g0125101 26.201 458 265 14 323 713 18 469 1.87e-30 125
Msa0036320 MtrunA17_Chr3g0125101 27.362 307 176 6 61 323 164 467 3.10e-27 115
Msa0036320 MtrunA17_Chr5g0447221 26.923 442 258 12 335 714 26 464 2.72e-30 125
Msa0036320 MtrunA17_Chr5g0447221 28.197 305 175 8 64 326 162 464 9.29e-27 114
Msa0036320 MtrunA17_Chr3g0125081 25.546 458 267 14 323 713 18 468 4.70e-30 124
Msa0036320 MtrunA17_Chr3g0125081 25.902 305 182 6 61 323 164 466 4.00e-27 115
Msa0036320 MtrunA17_Chr3g0130651 30.108 279 154 7 58 297 153 429 2.46e-29 122
Msa0036320 MtrunA17_Chr3g0130651 25.641 429 240 16 324 685 13 429 9.82e-26 111
Msa0036320 MtrunA17_Chr8g0384661 29.126 309 171 10 59 322 179 484 3.07e-29 122
Msa0036320 MtrunA17_Chr8g0384661 24.625 467 284 14 315 718 27 488 6.40e-28 118
Msa0036320 MtrunA17_Chr1g0146491 28.339 307 171 9 67 325 159 464 5.41e-29 121
Msa0036320 MtrunA17_Chr1g0146491 25.591 465 262 15 328 718 12 466 1.00e-28 120
Msa0036320 MtrunA17_Chr1g0159761 29.371 286 153 7 58 297 154 436 6.32e-28 118
Msa0036320 MtrunA17_Chr1g0159761 26.859 417 228 14 338 685 28 436 2.01e-25 110
Msa0036320 MtrunA17_Chr1g0184721 26.549 452 260 17 320 720 7 437 1.24e-27 116
Msa0036320 MtrunA17_Chr1g0184721 29.545 308 165 11 61 330 142 435 7.29e-26 111
Msa0036320 MtrunA17_Chr3g0103271 27.922 308 174 6 63 326 160 463 1.46e-27 116
Msa0036320 MtrunA17_Chr3g0103271 25.111 450 270 11 326 712 16 461 2.55e-24 107
Msa0036320 MtrunA17_Chr4g0037201 24.066 482 270 14 323 718 35 506 9.37e-27 115
Msa0036320 MtrunA17_Chr4g0037201 26.101 318 172 7 67 330 195 503 3.07e-23 104
Msa0036320 MtrunA17_Chr3g0140541 26.168 428 246 13 323 686 11 432 1.85e-26 113
Msa0036320 MtrunA17_Chr3g0140541 25.424 295 176 7 78 330 172 464 7.29e-23 102
Msa0036320 MtrunA17_Chr1g0146411 27.055 292 168 6 52 298 144 435 2.32e-26 113
Msa0036320 MtrunA17_Chr1g0146411 24.171 422 259 12 322 686 18 435 2.84e-25 110
Msa0036320 MtrunA17_Chr1g0146391 24.508 457 273 14 330 721 5 454 2.49e-26 113
Msa0036320 MtrunA17_Chr1g0146391 27.010 311 178 7 58 322 140 447 7.08e-23 102
Msa0036320 MtrunA17_Chr5g0447231 27.476 313 175 8 60 326 155 461 3.24e-26 112
Msa0036320 MtrunA17_Chr5g0447231 24.454 458 272 13 323 713 10 460 2.19e-22 101
Msa0036320 MtrunA17_Chr1g0206871 28.276 290 153 6 61 297 145 432 6.42e-25 108
Msa0036320 MtrunA17_Chr1g0206871 24.342 456 264 14 338 718 16 465 1.34e-23 104
Msa0036320 MtrunA17_Chr3g0103231 24.835 455 271 13 325 714 10 458 6.70e-25 108
Msa0036320 MtrunA17_Chr3g0103231 24.425 348 211 9 3 299 85 431 1.89e-22 101
Msa0036320 MtrunA17_Chr3g0103211 27.632 304 172 8 67 326 159 458 2.74e-24 107
Msa0036320 MtrunA17_Chr3g0103211 24.883 426 253 13 325 687 10 431 2.40e-21 97.8
Msa0036320 MtrunA17_Chr3g0140531 26.214 309 180 8 67 330 160 465 7.87e-24 105
Msa0036320 MtrunA17_Chr3g0140531 23.769 467 286 14 320 720 5 467 4.26e-20 94.0
Msa0036320 MtrunA17_Chr1g0206851 25.753 365 215 13 4 324 17 369 9.56e-24 103
Msa0036320 MtrunA17_Chr1g0206851 23.200 375 217 15 397 717 17 374 6.52e-18 86.3
Msa0036320 MtrunA17_Chr1g0146331 26.073 303 179 5 71 330 160 460 1.37e-23 104
Msa0036320 MtrunA17_Chr1g0146331 24.709 429 250 13 325 685 4 427 4.39e-20 94.0
Msa0036320 MtrunA17_Chr2g0293331 25.559 313 192 7 58 330 140 451 1.20e-22 101
Msa0036320 MtrunA17_Chr2g0293331 25.943 424 238 13 331 685 2 418 7.58e-22 99.4
Msa0036320 MtrunA17_Chr1g0206831 27.796 313 164 12 61 323 31 331 1.97e-22 99.4
Msa0036320 MtrunA17_Chr1g0206831 25.472 318 175 13 451 716 29 336 4.52e-17 83.2
Msa0036320 MtrunA17_Chr4g0058161 25.000 384 256 9 365 720 68 447 1.04e-21 99.0
Msa0036320 MtrunA17_Chr4g0058161 22.515 342 243 6 5 325 100 440 2.34e-17 85.5
Msa0036320 MtrunA17_Chr3g0103221 25.455 275 161 6 67 299 166 438 8.06e-21 96.3
Msa0036320 MtrunA17_Chr3g0103221 23.383 402 242 11 348 687 41 438 4.93e-19 90.9
Msa0036320 MtrunA17_Chr5g0436281 24.611 386 255 10 365 720 1 380 5.71e-20 92.8
Msa0036320 MtrunA17_Chr5g0436281 25.723 346 228 12 1 322 30 370 2.33e-17 84.7
Msa0036320 MtrunA17_Chr3g0103251 24.107 336 173 8 42 297 9 342 8.59e-20 92.0
Msa0036320 MtrunA17_Chr1g0206821 27.863 262 147 9 321 547 2 256 9.95e-16 80.9
Msa0036320 MtrunA17_Chr1g0206821 28.962 183 99 6 173 330 349 525 3.65e-13 72.8
Msa0036320 MtrunA17_Chr3g0130661 28.000 175 107 4 173 331 2 173 1.21e-14 72.8
Msa0036320 MtrunA17_Chr3g0112971 27.066 351 217 14 1 322 83 423 1.43e-14 76.6
Msa0036320 MtrunA17_Chr3g0112971 25.210 357 231 10 394 720 83 433 7.16e-14 74.3
Msa0036320 MtrunA17_Chr5g0402151 28.214 280 154 9 348 609 11 261 1.67e-14 74.7
Msa0036320 MtrunA17_Chr5g0402151 35.417 144 85 4 59 200 124 261 2.99e-11 64.7
Msa0036320 MtrunA17_Chr3g0105861 23.786 412 255 14 339 713 41 430 1.23e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036320 AT1G25530.1 69.249 426 102 3 324 720 14 439 0.0 570
Msa0036320 AT1G25530.1 68.091 351 88 2 1 327 84 434 5.64e-155 457
Msa0036320 AT5G40780.1 54.439 428 162 4 327 721 19 446 1.05e-162 477
Msa0036320 AT5G40780.1 55.043 347 132 2 1 323 90 436 3.76e-131 395
Msa0036320 AT1G48640.1 52.982 436 172 4 319 721 18 453 3.67e-154 455
Msa0036320 AT1G48640.1 54.179 347 135 2 1 323 97 443 1.30e-125 382
Msa0036320 AT5G40780.3 54.523 398 152 3 353 721 1 398 2.60e-151 446
Msa0036320 AT5G40780.3 55.043 347 132 2 1 323 42 388 4.79e-132 396
Msa0036320 AT5G40780.2 54.523 398 152 3 353 721 1 398 2.60e-151 446
Msa0036320 AT5G40780.2 55.043 347 132 2 1 323 42 388 4.79e-132 396
Msa0036320 AT1G24400.1 52.103 428 172 4 327 721 14 441 1.10e-148 441
Msa0036320 AT1G24400.1 53.026 347 139 2 1 323 85 431 4.30e-117 359
Msa0036320 AT1G67640.1 53.364 431 168 4 324 721 11 441 3.48e-145 432
Msa0036320 AT1G67640.1 54.755 347 133 2 1 323 85 431 3.26e-117 360
Msa0036320 AT1G61270.1 48.000 425 188 6 320 711 14 438 1.41e-129 392
Msa0036320 AT1G61270.1 48.286 350 155 3 1 324 90 439 7.10e-107 333
Msa0036320 AT1G71680.1 49.880 415 178 4 337 721 34 448 4.03e-123 375
Msa0036320 AT1G71680.1 53.736 348 136 3 1 323 91 438 3.77e-109 339
Msa0036320 AT3G01760.1 48.418 411 176 7 337 713 31 439 1.61e-122 374
Msa0036320 AT3G01760.1 48.148 351 153 5 1 323 88 437 2.33e-101 319
Msa0036320 AT1G71680.2 50.606 330 133 4 337 636 34 363 8.32e-103 319
Msa0036320 AT1G71680.2 53.114 273 103 3 1 248 91 363 2.54e-88 281
Msa0036320 AT1G47670.1 32.886 447 252 10 316 720 75 515 2.42e-65 226
Msa0036320 AT1G47670.1 32.877 365 209 6 1 330 150 513 3.11e-55 198
Msa0036320 AT4G35180.1 29.262 393 232 11 337 688 57 444 7.21e-39 150
Msa0036320 AT4G35180.1 28.280 343 205 10 1 307 114 451 1.63e-31 129
Msa0036320 AT1G08230.2 28.235 425 257 10 339 720 29 448 1.03e-37 147
Msa0036320 AT1G08230.2 26.184 359 222 9 2 323 87 439 1.97e-22 101
Msa0036320 AT4G35180.2 33.333 264 164 6 337 590 57 318 2.88e-36 140
Msa0036320 AT4G35180.2 29.469 207 118 6 1 181 114 318 1.68e-20 94.0
Msa0036320 AT5G41800.1 26.107 429 262 10 339 721 28 447 6.65e-34 135
Msa0036320 AT5G41800.1 25.683 366 228 11 7 335 91 449 1.23e-22 102
Msa0036320 AT1G10010.1 26.681 461 265 15 326 718 14 469 1.32e-32 132
Msa0036320 AT1G10010.1 25.515 388 230 11 3 334 89 473 3.55e-28 119
Msa0036320 AT1G10010.2 26.681 461 265 15 326 718 15 470 1.49e-32 132
Msa0036320 AT1G10010.2 25.515 388 230 11 3 334 90 474 4.01e-28 119
Msa0036320 AT1G58360.1 27.233 459 255 16 330 717 27 477 1.76e-32 132
Msa0036320 AT1G58360.1 28.135 327 180 11 58 334 164 485 2.59e-29 122
Msa0036320 AT5G09220.1 28.526 312 167 9 67 330 181 484 1.82e-29 123
Msa0036320 AT5G09220.1 24.947 473 270 16 320 718 26 487 3.35e-28 119
Msa0036320 AT5G63850.1 27.812 320 180 7 51 323 138 453 1.02e-28 120
Msa0036320 AT5G63850.1 25.275 455 253 17 338 718 19 460 1.17e-24 108
Msa0036320 AT5G49630.1 28.664 307 156 9 78 330 179 476 1.64e-27 117
Msa0036320 AT5G49630.1 26.866 469 251 17 320 711 16 469 2.31e-25 110
Msa0036320 AT1G44100.1 28.571 287 153 6 61 297 157 441 3.13e-26 113
Msa0036320 AT1G44100.1 24.375 480 285 15 311 718 1 474 1.42e-25 111
Msa0036320 AT1G77380.1 28.364 275 151 5 67 297 165 437 4.96e-26 112
Msa0036320 AT1G77380.1 25.000 420 249 12 330 685 20 437 1.71e-25 111
Msa0036320 AT5G23810.1 27.957 279 159 5 63 299 160 438 1.02e-24 108
Msa0036320 AT5G23810.1 27.354 446 221 15 325 687 13 438 9.66e-24 105
Msa0036320 AT1G08230.3 26.966 356 208 9 409 720 1 348 8.05e-23 101
Msa0036320 AT1G08230.3 25.797 345 213 9 16 323 1 339 4.33e-19 90.1
Msa0036320 AT1G08230.4 27.124 306 177 7 454 720 31 329 6.29e-20 92.0
Msa0036320 AT1G08230.4 25.763 295 182 7 61 323 31 320 3.95e-17 84.0
Msa0036320 AT1G08230.6 27.124 306 177 7 454 720 31 329 6.29e-20 92.0
Msa0036320 AT1G08230.6 25.763 295 182 7 61 323 31 320 3.95e-17 84.0
Msa0036320 AT1G08230.5 27.124 306 177 7 454 720 31 329 6.29e-20 92.0
Msa0036320 AT1G08230.5 25.763 295 182 7 61 323 31 320 3.95e-17 84.0
Msa0036320 AT5G23810.2 30.341 323 172 13 325 609 13 320 9.04e-19 89.4
Msa0036320 AT5G23810.2 30.220 182 104 4 63 221 160 341 3.69e-14 75.1
Msa0036320 AT3G55740.2 26.000 350 222 15 1 322 30 370 2.67e-16 82.0
Msa0036320 AT3G55740.2 22.021 386 265 9 365 720 1 380 7.49e-15 77.4
Msa0036320 AT3G55740.3 26.000 350 222 15 1 322 30 370 2.67e-16 82.0
Msa0036320 AT3G55740.3 22.021 386 265 9 365 720 1 380 7.49e-15 77.4
Msa0036320 AT3G55740.1 26.000 350 222 15 1 322 86 426 4.89e-16 81.6
Msa0036320 AT3G55740.1 21.678 429 294 11 323 720 19 436 5.71e-15 78.6
Msa0036320 AT2G39890.3 22.680 388 260 9 365 720 1 380 2.96e-15 79.0
Msa0036320 AT2G39890.3 25.862 348 225 13 1 322 30 370 4.41e-14 75.1
Msa0036320 AT2G39890.2 22.506 431 288 11 323 720 22 439 3.03e-15 79.3
Msa0036320 AT2G39890.2 25.648 347 227 12 1 322 89 429 8.08e-14 74.7
Msa0036320 AT2G39890.1 22.506 431 288 11 323 720 22 439 3.03e-15 79.3
Msa0036320 AT2G39890.1 25.648 347 227 12 1 322 89 429 8.08e-14 74.7
Msa0036320 AT2G36590.1 23.114 411 269 13 320 692 4 405 4.31e-15 78.6
Msa0036320 AT2G36590.1 25.994 327 209 15 1 301 83 402 4.49e-13 72.4
Msa0036320 AT5G23810.4 30.350 257 130 11 325 545 13 256 7.46e-14 72.8
Msa0036320 AT5G23810.5 32.020 203 96 9 325 498 13 202 1.65e-11 65.1
Msa0036320 AT5G23810.3 32.020 203 96 9 325 498 13 202 1.65e-11 65.1

Find 170 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAATTTCAATTCTGTTTC+TGG -0.047346 1_1:-64774977 Msa0036320:CDS
CCTTTCTTTGGTGATCTTCT+TGG 0.112311 1_1:-64773885 Msa0036320:CDS
CCATTCTTTGGTGATCTTCT+TGG 0.125094 1_1:-64768053 Msa0036320:CDS
CTTGGGTTCTTTGGTGGATT+TGG 0.189697 1_1:-64773867 Msa0036320:CDS
CTTGGTTTCTTTGGTGGATT+TGG 0.190402 1_1:-64768035 Msa0036320:CDS
ACAATCCATGCTCCAAATTT+TGG 0.192481 1_1:+64770466 None:intergenic
CACAAATCAAGCAATCTTAT+TGG 0.207596 1_1:-64770339 Msa0036320:CDS
GGTGATCTTCTTGGGTTCTT+TGG 0.217065 1_1:-64773876 Msa0036320:CDS
GGTGATCTTCTTGGTTTCTT+TGG 0.222066 1_1:-64768044 Msa0036320:CDS
CACAAATCAAGCAGACTTAT+TGG 0.233814 1_1:-64775042 Msa0036320:CDS
ACCAGAAACAGAATTGAAAT+TGG 0.235717 1_1:+64774976 None:intergenic
ATCATTGGATATTGGACTTT+TGG 0.238047 1_1:-64768540 Msa0036320:CDS
ACAAGCAACAGAATTGAAAT+TGG 0.243774 1_1:+64770273 None:intergenic
AAAAGACATTGGTTAAAGTT+TGG 0.245530 1_1:+64767557 None:intergenic
AACATATGCATTGTCTTTCT+AGG 0.256313 1_1:+64767412 None:intergenic
ACCTTAGGATATTGGGCTTT+TGG 0.273380 1_1:-64774397 Msa0036320:intron
TGTTGCAACCTTAGGATATT+GGG 0.286853 1_1:-64774404 Msa0036320:intron
ACATATTGCATTGATGAAAT+AGG 0.289055 1_1:+64768578 None:intergenic
CTTTCTTTGGTGATCTTCTT+GGG 0.293290 1_1:-64773884 Msa0036320:CDS
CAGTTGATGCTGAATTTCTT+TGG 0.293533 1_1:+64767855 None:intergenic
ATTGCAACATCATGCACTTT+AGG 0.299155 1_1:+64767584 None:intergenic
ACAATCCATGCTCCAAGTTT+TGG 0.304672 1_1:+64775169 None:intergenic
CTGTTGCAACCTTAGGATAT+TGG 0.307911 1_1:-64774405 Msa0036320:intron
AAAGACATTGGTTAAAGTTT+GGG 0.311021 1_1:+64767558 None:intergenic
CAAATATCATTTGCATTTGC+TGG 0.313692 1_1:-64768690 Msa0036320:intron
TGTTGCTTCTGCTAATTTGA+TGG 0.317052 1_1:-64774323 Msa0036320:CDS
TTCCACATTGCTATCTTTGA+TGG 0.317361 1_1:+64768615 None:intergenic
CACCATTTGGCTCGGCGAGC+GGG 0.318292 1_1:+64770820 None:intergenic
GCATCAACTGGTTCATCAAT+TGG 0.320001 1_1:-64767842 Msa0036320:CDS
CAGTTGCAATCATTGGATAT+TGG 0.324782 1_1:-64768548 Msa0036320:CDS
CAGCATCTGTGATGTCATTA+AGG 0.339444 1_1:-64774943 Msa0036320:intron
CAGCAGCTGCGATGTCATTA+AGG 0.342052 1_1:-64770240 Msa0036320:intron
GTATCAACTGGTTCATCAAT+TGG 0.343957 1_1:-64773672 Msa0036320:CDS
GATCTTGGTAGACATGCTTT+TGG 0.349503 1_1:-64770490 Msa0036320:CDS
GATCTTGGTAGACATGCTTT+TGG 0.349503 1_1:-64775193 Msa0036320:CDS
TATTTCCCAGTTGCAATCAT+TGG 0.357091 1_1:-64768555 Msa0036320:CDS
AGCAGTGACACTTGAAATTC+AGG 0.357234 1_1:-64774521 Msa0036320:CDS
TGTCACTTGAAAGACCTTCA+TGG 0.357587 1_1:-64774348 Msa0036320:CDS
CAATATCCAATGATTGCAAC+TGG 0.369765 1_1:+64768549 None:intergenic
TATTGCCTCTGCTAACTTGA+TGG 0.384313 1_1:-64768466 Msa0036320:intron
CCATATGCCATGGCATATCT+AGG 0.384355 1_1:-64770742 Msa0036320:CDS
TTTCCACATTGGTATCTTTG+AGG 0.388395 1_1:+64774471 None:intergenic
TTCGATCGATATATTGATCT+TGG 0.392177 1_1:-64770505 Msa0036320:CDS
TTCGATCGATATATTGATCT+TGG 0.392177 1_1:-64775208 Msa0036320:CDS
CCTAGATATGCCATGGCATA+TGG 0.396380 1_1:+64770742 None:intergenic
GATCTTCTTGGTTTCTTTGG+TGG 0.397329 1_1:-64768041 Msa0036320:CDS
TTCCACATTGGTATCTTTGA+GGG 0.404964 1_1:+64774472 None:intergenic
GATCTTCTTGGGTTCTTTGG+TGG 0.405520 1_1:-64773873 Msa0036320:CDS
CCCTCAATCAAGTCGAAAAC+AGG 0.411781 1_1:+64774115 None:intergenic
TGGGTGTGATATTGTGTATA+TGG 0.422852 1_1:-64770416 Msa0036320:intron
TGTCTTCTATGTAGGGGTCC+AGG 0.426937 1_1:-64770616 Msa0036320:intron
GCAAGGATACCAAAGGGAAA+AGG 0.435281 1_1:-64767369 Msa0036320:three_prime_UTR
CATAGGTGTGTGTATTATGT+TGG 0.442281 1_1:-64773470 Msa0036320:CDS
GTCTTCTATGTAGGGGTCCA+GGG 0.447900 1_1:-64770615 Msa0036320:intron
TTCAGAGTCTTCAGTGCACT+TGG 0.458661 1_1:-64774571 Msa0036320:CDS
CAAAGAAATTCAGCATCAAC+TGG 0.459192 1_1:-64767854 Msa0036320:CDS
ATGGTATTCATCAATGTTGT+TGG 0.461172 1_1:-64774304 Msa0036320:CDS
TATCGATCGAAACGAGTTCC+CGG 0.464202 1_1:+64770517 None:intergenic
TATCGATCGAAACGAGTTCC+CGG 0.464202 1_1:+64775220 None:intergenic
TATCAACTGGTTCATCAATT+GGG 0.465212 1_1:-64773671 Msa0036320:intron
CATCAACTGGTTCATCAATT+GGG 0.466386 1_1:-64767841 Msa0036320:intron
CCAGAAACAGAATTGAAATT+GGG 0.476787 1_1:+64774977 None:intergenic
CCGGTACACATTCATGTAGC+TGG 0.479177 1_1:+64770536 None:intergenic
CATAGCTAACATTGTCAATC+CGG 0.479899 1_1:+64768769 None:intergenic
GCAGTTATTCAACTATAGCC+TGG 0.481479 1_1:-64768812 Msa0036320:intron
ATTATCAACCACATTATACT+AGG 0.481623 1_1:+64773715 None:intergenic
CAAGCAACAGAATTGAAATT+GGG 0.483302 1_1:+64770274 None:intergenic
CAAGGAGATTCAGTATCAAC+TGG 0.484016 1_1:-64773684 Msa0036320:CDS
AGCAACTGATTGTACAAGTT+GGG 0.485034 1_1:-64770435 Msa0036320:CDS
AGCAACTGATTGTACAAGTT+GGG 0.485034 1_1:-64775138 Msa0036320:CDS
CATAGGTGTATGTATTATGC+TGG 0.485146 1_1:-64767667 Msa0036320:CDS
CAAGGATACCAAAGGGAAAA+GGG 0.486512 1_1:-64767368 Msa0036320:three_prime_UTR
GAGAACACCGGCACCTATCA+TGG 0.487053 1_1:+64770771 None:intergenic
CCAAGAAGATCACCAAAGAA+TGG 0.490031 1_1:+64768053 None:intergenic
CAATGTTGTTGGTAGTTACC+AGG 0.490189 1_1:-64774293 Msa0036320:intron
GAAAGTCGAGTACCACCATT+TGG 0.492593 1_1:+64770807 None:intergenic
ATGTTGGCATCTACAATTGG+TGG 0.495108 1_1:-64773454 Msa0036320:CDS
GAATTGTAGCTTGGATTTCA+AGG 0.495589 1_1:+64768655 None:intergenic
ATTATGTTGGCATCTACAAT+TGG 0.496034 1_1:-64773457 Msa0036320:CDS
CATAAAGTAGCACATGTTGA+AGG 0.497732 1_1:-64767473 Msa0036320:three_prime_UTR
TGGGTGTGACACTGTCTATA+TGG 0.500270 1_1:-64775119 Msa0036320:intron
GAATTTCAAGTGTCACTGCT+TGG 0.504427 1_1:+64774524 None:intergenic
ACCCCGCTCGCCGAGCCAAA+TGG 0.505335 1_1:-64770822 Msa0036320:CDS
TCTTGATGTTGTTACTATCA+TGG 0.505997 1_1:-64770591 Msa0036320:CDS
CCAAGAAGATCACCAAAGAA+AGG 0.507544 1_1:+64773885 None:intergenic
CACACGGTGACAGCCATGAT+AGG 0.515627 1_1:-64770784 Msa0036320:CDS
ATTCAGGCTGGAATTTACAT+AGG 0.516907 1_1:-64767684 Msa0036320:intron
ATTATCATCCACATTATGCT+AGG 0.517258 1_1:+64767885 None:intergenic
TGGCTTGCTTATCTAGAGGC+CGG 0.521139 1_1:-64768788 Msa0036320:CDS
CAGCAACTGATTGTACAAGT+TGG 0.521805 1_1:-64770436 Msa0036320:CDS
CAGCAACTGATTGTACAAGT+TGG 0.521805 1_1:-64775139 Msa0036320:CDS
CCACCATTTGGCTCGGCGAG+CGG 0.522493 1_1:+64770819 None:intergenic
TTCAGAGTCTTCAATGCACT+TGG 0.526535 1_1:-64768714 Msa0036320:CDS
CATCTACAATTGGTGGCTTG+AGG 0.526894 1_1:-64773447 Msa0036320:CDS
ATGCTGGCATCAACAGTTGG+TGG 0.536115 1_1:-64767651 Msa0036320:CDS
GTAGCTCGATCTGCTTATGT+AGG 0.537760 1_1:-64768197 Msa0036320:intron
TATCTTCATTTGAAACTGCA+AGG 0.538442 1_1:-64767386 Msa0036320:three_prime_UTR
CCAGCTACATGAATGTGTAC+CGG 0.539689 1_1:-64770536 Msa0036320:CDS
CCAGCTACATGAATGTGTAC+CGG 0.539689 1_1:-64775239 None:intergenic
TAACATATGCATTTATGTGA+TGG 0.541858 1_1:-64767328 Msa0036320:three_prime_UTR
ACCATTTGGCTCGGCGAGCG+GGG 0.543022 1_1:+64770821 None:intergenic
TTGGACCAAAATTTGGAGCA+TGG 0.543252 1_1:-64770471 Msa0036320:CDS
TTCAGCTTCCTAGCATAATG+TGG 0.544906 1_1:-64767893 Msa0036320:intron
AATTGTAGCTTGGATTTCAA+GGG 0.551783 1_1:+64768656 None:intergenic
TTGGACCAAAACTTGGAGCA+TGG 0.552103 1_1:-64775174 Msa0036320:CDS
CAGCTACATGAATGTGTACC+GGG 0.552607 1_1:-64770535 Msa0036320:CDS
CAGCTACATGAATGTGTACC+GGG 0.552607 1_1:-64775238 Msa0036320:CDS
GCAGAGGCAATAAGCCATGA+AGG 0.552923 1_1:+64768477 None:intergenic
TGGCTTGCTTATCTAGAGGT+CGG 0.553665 1_1:-64774645 Msa0036320:CDS
GAGCCTTACAAAATATGAAG+TGG 0.554960 1_1:+64768004 None:intergenic
CATCAACAGTTGGTGGCTTG+AGG 0.555996 1_1:-64767644 Msa0036320:CDS
TTTCAGGCTGCAATTTGCAT+AGG 0.556529 1_1:-64773487 Msa0036320:intron
GCAGAAGCAACAAGCCATGA+AGG 0.558683 1_1:+64774334 None:intergenic
TACAAGTCTAAGCGCTACAC+CGG 0.559820 1_1:+64768217 None:intergenic
GTGACAGCCATGATAGGTGC+CGG 0.561879 1_1:-64770778 Msa0036320:CDS
TGTCATCTTACCTACATAAG+CGG 0.563184 1_1:+64774033 None:intergenic
ACATGTTGAAGGCATAGTCT+AGG 0.567532 1_1:-64767462 Msa0036320:three_prime_UTR
GCAGCTATTCAACTATAGCA+TGG 0.567758 1_1:-64774669 Msa0036320:intron
CGACTTGATTGAGGGGACGA+TGG 0.567976 1_1:-64774107 Msa0036320:CDS
ATATGGCAGGCTGAGAACAC+CGG 0.571486 1_1:+64770759 None:intergenic
CAGTTATTCAACTATAGCCT+GGG 0.571690 1_1:-64768811 Msa0036320:CDS
AGTAACAACATCAAGATCCC+TGG 0.572772 1_1:+64770598 None:intergenic
CAGTTGATACTGAATCTCCT+TGG 0.572840 1_1:+64773685 None:intergenic
TTCAGCTTCCTAGTATAATG+TGG 0.573976 1_1:-64773723 Msa0036320:intron
GTGTCTTACAAAATATGAAG+TGG 0.575151 1_1:+64773836 None:intergenic
AACTCAAGCAGAACTAAAAG+AGG 0.577761 1_1:-64770854 Msa0036320:CDS
CAAATAGCACCTTTCCACAT+TGG 0.577846 1_1:+64774460 None:intergenic
GTAGCTCGATCCGCTTATGT+AGG 0.579192 1_1:-64774043 Msa0036320:intron
CGAAGATTGAACTTCCCTCC+CGG 0.581202 1_1:-64768236 Msa0036320:CDS
GATATGCCATGGCATATGGC+AGG 0.583697 1_1:+64770746 None:intergenic
TTAGGTGTAGAAACTATAAG+TGG 0.584367 1_1:+64767602 None:intergenic
CTATTCAACTATAGCATGGG+TGG 0.588940 1_1:-64774665 Msa0036320:CDS
GAAACTGCAAGGATACCAAA+GGG 0.589359 1_1:-64767375 Msa0036320:three_prime_UTR
CAGCTATTCAACTATAGCAT+GGG 0.589525 1_1:-64774668 Msa0036320:CDS
TCTCAGCCTGCCATATGCCA+TGG 0.590092 1_1:-64770752 Msa0036320:CDS
TGTCTTACAAAATATGAAGT+GGG 0.591229 1_1:+64773837 None:intergenic
ATGCCATGGCATATCTAGGA+TGG 0.592717 1_1:-64770738 Msa0036320:intron
GAAGTGTCTAAAGCAGTTTG+TGG 0.595626 1_1:-64770383 Msa0036320:intron
TGAAACTGCAAGGATACCAA+AGG 0.595997 1_1:-64767376 Msa0036320:three_prime_UTR
GTGTTGATGGAATTGTAGCT+TGG 0.599762 1_1:+64768646 None:intergenic
AGTCTAAGCGCTACACTAGG+AGG 0.600415 1_1:+64774067 None:intergenic
TCTAGATAAGCAAGCCACCC+AGG 0.604949 1_1:+64768794 None:intergenic
TCAAGCAGAACTAAAAGAGG+TGG 0.605172 1_1:-64770851 Msa0036320:CDS
GGTTGATAATCAAGAAGCCA+AGG 0.608652 1_1:-64773702 Msa0036320:CDS
TCGAGTACCACCATTTGGCT+CGG 0.611700 1_1:+64770812 None:intergenic
ACAAGTCTAAGCGCTACACT+AGG 0.618313 1_1:+64774064 None:intergenic
AGCCTTACAAAATATGAAGT+GGG 0.619496 1_1:+64768005 None:intergenic
TTACCATCCTAGATATGCCA+TGG 0.621396 1_1:+64770735 None:intergenic
GTCTAAGCGCTACACTAGGA+GGG 0.622626 1_1:+64774068 None:intergenic
CCGCTCGCCGAGCCAAATGG+TGG 0.623958 1_1:-64770819 Msa0036320:CDS
TCAAAGATAGCAATGTGGAA+TGG 0.633739 1_1:-64768612 Msa0036320:CDS
TGGGTGGCTTGCTTATCTAG+AGG 0.637440 1_1:-64768792 Msa0036320:CDS
GTCTAAGCGCTACACCGGGA+GGG 0.638037 1_1:+64768222 None:intergenic
GGCTACAATTCCATCAACAC+CGG 0.639290 1_1:-64774500 Msa0036320:CDS
TGGGTGGCTTGCTTATCTAG+AGG 0.642172 1_1:-64774649 Msa0036320:CDS
ACTTGTACAATCAGTTGCTG+AGG 0.645642 1_1:+64770439 None:intergenic
ACTTGTACAATCAGTTGCTG+AGG 0.645642 1_1:+64775142 None:intergenic
AATATCCAATGATTGCAACT+GGG 0.647290 1_1:+64768550 None:intergenic
TTATTCAACTATAGCCTGGG+TGG 0.647749 1_1:-64768808 Msa0036320:CDS
AATCAAGTCGAAAACAGGCA+TGG 0.649483 1_1:+64774120 None:intergenic
CTATCATGGCTGTCACCGTG+TGG 0.649580 1_1:+64770785 None:intergenic
TCAAAGATACCAATGTGGAA+AGG 0.651467 1_1:-64774469 Msa0036320:intron
GTCTAACATTAAACACAATG+TGG 0.662630 1_1:-64770567 Msa0036320:CDS
GTGGTACTCGACTTTCCACA+CGG 0.666742 1_1:-64770800 Msa0036320:CDS
ACAAGTCTAAGCGCTACACC+GGG 0.666755 1_1:+64768218 None:intergenic
GAATACCATCAAGTTAGCAG+AGG 0.672919 1_1:+64768461 None:intergenic
ATTATGCTGGCATCAACAGT+TGG 0.680435 1_1:-64767654 Msa0036320:CDS
AGTCTAAGCGCTACACCGGG+AGG 0.683026 1_1:+64768221 None:intergenic
AACCCTCAAAGATACCAATG+TGG 0.718377 1_1:-64774474 Msa0036320:CDS
AACCATCAAAGATAGCAATG+TGG 0.720124 1_1:-64768617 Msa0036320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr1_1:64771882-64771901 Msa0036320:intron 0.0%
!! AAATTATATTAGTATATGAT+AGG - chr1_1:64767709-64767728 Msa0036320:intron 10.0%
!!! ACTTATTTTAATTTGTTTTA+TGG + chr1_1:64767798-64767817 None:intergenic 10.0%
!! TAAAATCATATTATATAGTA+AGG + chr1_1:64767852-64767871 None:intergenic 10.0%
!!! TCTTTTTTTTTTTTTTTTGA+AGG - chr1_1:64768971-64768990 Msa0036320:intron 10.0%
!! ATTTACTCTTAATTTAAAAA+AGG - chr1_1:64770040-64770059 Msa0036320:intron 10.0%
!! TAATTTAAAAAAGGAAAAAA+AGG - chr1_1:64770049-64770068 Msa0036320:intron 10.0%
!! AATTTAAAAAAGGAAAAAAA+GGG - chr1_1:64770050-64770069 Msa0036320:intron 10.0%
!!! TCATTAAGTTAATATTATTT+TGG + chr1_1:64771105-64771124 None:intergenic 10.0%
!!! TTTAGATTTTATTATTGTAA+AGG + chr1_1:64774768-64774787 None:intergenic 10.0%
!! TGATCAGAAAATAAAATTTA+AGG + chr1_1:64768375-64768394 None:intergenic 15.0%
!!! AAATTTTATTTTCTGATCAA+TGG - chr1_1:64768376-64768395 Msa0036320:intron 15.0%
!!! AATTTTATTTTCTGATCAAT+GGG - chr1_1:64768377-64768396 Msa0036320:intron 15.0%
!! TTAAATAATTCTTCTATAAG+CGG + chr1_1:64768561-64768580 None:intergenic 15.0%
!! AATAAAAAAAGTAAAGACAT+TGG + chr1_1:64769199-64769218 None:intergenic 15.0%
!!! AAAATCATGTCATTTTTTAA+GGG + chr1_1:64769340-64769359 None:intergenic 15.0%
!! TATGTAGTAGTTAAAAAATA+TGG - chr1_1:64769747-64769766 Msa0036320:intron 15.0%
!!! TTTTTTAATTTTTGAGTGAT+GGG + chr1_1:64770913-64770932 None:intergenic 15.0%
!!! TTTTTTTAATTTTTGAGTGA+TGG + chr1_1:64770914-64770933 None:intergenic 15.0%
!! TTAATTAATGTGTAATGTAA+AGG + chr1_1:64770987-64771006 None:intergenic 15.0%
!!! TTAAGTTAATATTATTTTGG+TGG + chr1_1:64771102-64771121 None:intergenic 15.0%
!!! TATAATAAATTTTGTTAGCA+TGG - chr1_1:64771613-64771632 Msa0036320:intron 15.0%
!!! ACTTTCTATTTTTCTTTTTT+GGG + chr1_1:64772478-64772497 None:intergenic 15.0%
!!! TACTTTCTATTTTTCTTTTT+TGG + chr1_1:64772479-64772498 None:intergenic 15.0%
!!! GTAACTTTTTTTATAAGTTT+TGG - chr1_1:64772715-64772734 Msa0036320:intron 15.0%
!!! TGGTTTTGTTAAAAAAAAAA+GGG - chr1_1:64773272-64773291 Msa0036320:intron 15.0%
!! ATTAAATTATACCTACAAAT+AGG - chr1_1:64773577-64773596 Msa0036320:intron 15.0%
!! TCAAATATTTGTACAAAAAA+CGG + chr1_1:64774205-64774224 None:intergenic 15.0%
!!! AGAATCAATTCATTTTAAAT+TGG + chr1_1:64774596-64774615 None:intergenic 15.0%
!!! ACTTATTGGATTATGATTTT+TGG - chr1_1:64767516-64767535 Msa0036320:three_prime_UTR 20.0%
!!! TGTAACTATAGAATTTTTCT+GGG + chr1_1:64767690-64767709 None:intergenic 20.0%
!!! TTGTAACTATAGAATTTTTC+TGG + chr1_1:64767691-64767710 None:intergenic 20.0%
!! TTATGGAAAAGAATAAATGT+TGG + chr1_1:64767754-64767773 None:intergenic 20.0%
!!! ATTCTTTTCCATAAAGTATT+TGG - chr1_1:64767760-64767779 Msa0036320:intron 20.0%
!! AAATCAATCCAAATACTTTA+TGG + chr1_1:64767771-64767790 None:intergenic 20.0%
!!! ATTTTATTTTCTGATCAATG+GGG - chr1_1:64768378-64768397 Msa0036320:intron 20.0%
!!! TCAGCTTTTACATTATTATT+TGG - chr1_1:64768626-64768645 Msa0036320:CDS 20.0%
!!! CAGCTTTTACATTATTATTT+GGG - chr1_1:64768627-64768646 Msa0036320:CDS 20.0%
!!! AGCTTTTACATTATTATTTG+GGG - chr1_1:64768628-64768647 Msa0036320:CDS 20.0%
!! TTAGGTATAGAAATTATAAG+TGG + chr1_1:64769142-64769161 None:intergenic 20.0%
!!! TGAAATTTGGTAGTTTTTTA+GGG + chr1_1:64769308-64769327 None:intergenic 20.0%
!!! ATGAAATTTGGTAGTTTTTT+AGG + chr1_1:64769309-64769328 None:intergenic 20.0%
!!! AAATCATGTCATTTTTTAAG+GGG + chr1_1:64769339-64769358 None:intergenic 20.0%
!!! CAAAATCATGTCATTTTTTA+AGG + chr1_1:64769341-64769360 None:intergenic 20.0%
!!! AACATTCCTTACTTTTATAT+CGG - chr1_1:64769507-64769526 Msa0036320:intron 20.0%
!! TTAATGTCAAAGTTGTATAT+TGG + chr1_1:64769631-64769650 None:intergenic 20.0%
!! AAAACAAGATTAAACTATGT+TGG - chr1_1:64769947-64769966 Msa0036320:intron 20.0%
!!! ATGTCACTTTATACTAAATT+TGG - chr1_1:64769992-64770011 Msa0036320:intron 20.0%
!!! ACTAAATTTGGTAAGTTTTT+AGG - chr1_1:64770004-64770023 Msa0036320:intron 20.0%
!!! CTAAATTTGGTAAGTTTTTA+GGG - chr1_1:64770005-64770024 Msa0036320:intron 20.0%
!! TAATTGTTAATGTGATTGTA+TGG - chr1_1:64770231-64770250 Msa0036320:intron 20.0%
!! ATGATGAGTTTATATTATGT+TGG + chr1_1:64770456-64770475 None:intergenic 20.0%
!!! AAAACATATTTTTCGAACTA+AGG - chr1_1:64770632-64770651 Msa0036320:intron 20.0%
!! ATCATTAACTCAAAATTTAG+TGG - chr1_1:64770794-64770813 Msa0036320:CDS 20.0%
!!! AACATCACTTTTTTTTTAGT+GGG + chr1_1:64771063-64771082 None:intergenic 20.0%
!!! AAACATCACTTTTTTTTTAG+TGG + chr1_1:64771064-64771083 None:intergenic 20.0%
!! TCCATCATAAAAATTATTCT+TGG - chr1_1:64771136-64771155 Msa0036320:intron 20.0%
!!! ACCAAGAATAATTTTTATGA+TGG + chr1_1:64771140-64771159 None:intergenic 20.0%
!! CATAAAAATTATTCTTGGTT+AGG - chr1_1:64771141-64771160 Msa0036320:intron 20.0%
!! AAATAAAGCAAGATTATCTT+AGG + chr1_1:64771281-64771300 None:intergenic 20.0%
!!! ATAATCTTGCTTTATTTGTT+GGG - chr1_1:64771284-64771303 Msa0036320:intron 20.0%
!!! TCTTATTGGATTTTGATTTT+TGG - chr1_1:64772219-64772238 Msa0036320:intron 20.0%
!! TTTGATTATTTATTACTCCT+TGG - chr1_1:64772383-64772402 Msa0036320:intron 20.0%
!!! TGACATTTTATATTCATACA+AGG - chr1_1:64772423-64772442 Msa0036320:intron 20.0%
!!! AATTAATCATTTCTAGTTGT+TGG + chr1_1:64772530-64772549 None:intergenic 20.0%
!!! TTTTAATAGTGTTTGTACTA+TGG - chr1_1:64772663-64772682 Msa0036320:intron 20.0%
!!! TTTTGGTAGATATTTATGTT+GGG - chr1_1:64772732-64772751 Msa0036320:intron 20.0%
!!! GGTATCATAATATATTGATT+CGG - chr1_1:64773013-64773032 Msa0036320:intron 20.0%
!!! GTATCATAATATATTGATTC+GGG - chr1_1:64773014-64773033 Msa0036320:intron 20.0%
!!! TAGTCATATCTTTTCAATTT+GGG + chr1_1:64773109-64773128 None:intergenic 20.0%
!!! ATAGTCATATCTTTTCAATT+TGG + chr1_1:64773110-64773129 None:intergenic 20.0%
!! GTAAAGTAAATTGTTGAAAT+TGG + chr1_1:64773194-64773213 None:intergenic 20.0%
!!! CTGGTTTTGTTAAAAAAAAA+AGG - chr1_1:64773271-64773290 Msa0036320:intron 20.0%
!!! TTGCTATTTCATAAATTTGA+AGG - chr1_1:64773301-64773320 Msa0036320:intron 20.0%
!!! ATTAAATCAATTTTGCTGAT+TGG + chr1_1:64773809-64773828 None:intergenic 20.0%
!! GTTGGGTAAAAATATATTAT+AGG - chr1_1:64774241-64774260 Msa0036320:intron 20.0%
!!! AGAATTATTTTCTTCATGAT+AGG - chr1_1:64774419-64774438 Msa0036320:intron 20.0%
!! AAAACTAAAAAGTCAATTGT+TGG - chr1_1:64774616-64774635 Msa0036320:CDS 20.0%
!! AATTTATGTGTCTTTAATTC+AGG - chr1_1:64774844-64774863 Msa0036320:intron 20.0%
!! ACTAAAAAACTAAAAGACAT+TGG + chr1_1:64775001-64775020 None:intergenic 20.0%
!!! GCATATTGCATTGATTAAAT+AGG + chr1_1:64768112-64768131 None:intergenic 25.0%
! TGTCTTACAAAATATGAAGT+GGG + chr1_1:64768710-64768729 None:intergenic 25.0%
! AAAATTTGACATAAGCATAG+AGG + chr1_1:64768750-64768769 None:intergenic 25.0%
! ATTATCAACCACATTATACT+AGG + chr1_1:64768832-64768851 None:intergenic 25.0%
! AATTTCGTTTCTTTCATTTC+AGG - chr1_1:64769041-64769060 Msa0036320:intron 25.0%
!! AAAGACATTGGTTAAAGTTT+GGG + chr1_1:64769187-64769206 None:intergenic 25.0%
!! TAAAGACATTGGTTAAAGTT+TGG + chr1_1:64769188-64769207 None:intergenic 25.0%
!!! GAAATTTGGTAGTTTTTTAG+GGG + chr1_1:64769307-64769326 None:intergenic 25.0%
!!! GAGCTCAATTTTTTTTTTTG+AGG + chr1_1:64769468-64769487 None:intergenic 25.0%
!!! GAGCTCTAAATTTGATTTTT+AGG - chr1_1:64769482-64769501 Msa0036320:intron 25.0%
! AAAAGTCCGATATAAAAGTA+AGG + chr1_1:64769516-64769535 None:intergenic 25.0%
! TTCATCTTATAACTGTAATG+TGG - chr1_1:64770182-64770201 Msa0036320:intron 25.0%
! ACATTATATAAGATGTGCAT+CGG + chr1_1:64770296-64770315 None:intergenic 25.0%
! TGTGTGAAAAATTGACAAAA+GGG + chr1_1:64770321-64770340 None:intergenic 25.0%
!! CATTTCACTTCTTATTTGAT+TGG + chr1_1:64770405-64770424 None:intergenic 25.0%
! GAGTTTATATTATGTTGGAA+TGG + chr1_1:64770451-64770470 None:intergenic 25.0%
! CTTATAAGATATGAGCTAAA+TGG - chr1_1:64770526-64770545 Msa0036320:CDS 25.0%
!!! ATGTTTTAAAGAGTTACCTT+AGG + chr1_1:64770619-64770638 None:intergenic 25.0%
! TAGTAGAAAAACAATTCTAG+TGG - chr1_1:64770714-64770733 Msa0036320:intron 25.0%
! GAGTTAATGATTAAACTTTG+TGG + chr1_1:64770785-64770804 None:intergenic 25.0%
!! ACATTTTATTGGTAAGTGAA+AGG + chr1_1:64770889-64770908 None:intergenic 25.0%
!!! ACATCACTTTTTTTTTAGTG+GGG + chr1_1:64771062-64771081 None:intergenic 25.0%
!!! ATATTATTTTGGTGGTGTTA+GGG + chr1_1:64771094-64771113 None:intergenic 25.0%
!!! AATATTATTTTGGTGGTGTT+AGG + chr1_1:64771095-64771114 None:intergenic 25.0%
! TATATTACCCTACTATATAC+AGG - chr1_1:64771179-64771198 Msa0036320:intron 25.0%
! GAAATAGAATCAAATACTGA+TGG - chr1_1:64771245-64771264 Msa0036320:intron 25.0%
!!! GATAATCTTGCTTTATTTGT+TGG - chr1_1:64771283-64771302 Msa0036320:intron 25.0%
!! TTTATTTGTTGGGTTTAAAG+TGG - chr1_1:64771294-64771313 Msa0036320:intron 25.0%
! AATGAACAAGTTTCAATGAA+AGG + chr1_1:64771325-64771344 None:intergenic 25.0%
! ATTATATACACACAATGACT+TGG + chr1_1:64771599-64771618 None:intergenic 25.0%
! AATTATCTTGTCTTCTATGT+AGG - chr1_1:64771920-64771939 Msa0036320:intron 25.0%
! ATTATCTTGTCTTCTATGTA+GGG - chr1_1:64771921-64771940 Msa0036320:intron 25.0%
! GATATTGTGTATATGGTTAT+TGG - chr1_1:64772135-64772154 Msa0036320:intron 25.0%
!!! TATTGGATTTTGATTTTTGG+TGG - chr1_1:64772222-64772241 Msa0036320:intron 25.0%
!! TTATATTCATACAAGGTACT+AGG - chr1_1:64772430-64772449 Msa0036320:intron 25.0%
!! TATATTCATACAAGGTACTA+GGG - chr1_1:64772431-64772450 Msa0036320:intron 25.0%
!!! TTCATTAACTTCACCTTTTT+TGG - chr1_1:64772563-64772582 Msa0036320:intron 25.0%
!!! GTTTTGGTAGATATTTATGT+TGG - chr1_1:64772731-64772750 Msa0036320:intron 25.0%
!! AACATTTTACAAGTGATTGT+GGG + chr1_1:64772833-64772852 None:intergenic 25.0%
! ACTTTACTAAAGAGATACTT+AGG - chr1_1:64773207-64773226 Msa0036320:intron 25.0%
! TTAGAAGTAAGATTTAGTAG+AGG - chr1_1:64773482-64773501 Msa0036320:CDS 25.0%
! CATTCTTTAATATCAACAGT+AGG + chr1_1:64773519-64773538 None:intergenic 25.0%
!! ACATATTGCATTGATGAAAT+AGG + chr1_1:64773969-64773988 None:intergenic 25.0%
!! TCACTATTTTCACAAATTTG+AGG + chr1_1:64774160-64774179 None:intergenic 25.0%
! ATTTGAAAATGTCGTATGAT+CGG - chr1_1:64774219-64774238 Msa0036320:intron 25.0%
!! TCAGCTTTTACATTATTCTT+TGG - chr1_1:64774458-64774477 Msa0036320:intron 25.0%
!! CAGCTTTTACATTATTCTTT+GGG - chr1_1:64774459-64774478 Msa0036320:intron 25.0%
!! AGCTTTTACATTATTCTTTG+GGG - chr1_1:64774460-64774479 Msa0036320:intron 25.0%
! AAACAGAATACAAAAACCAA+AGG - chr1_1:64774787-64774806 Msa0036320:intron 25.0%
!! AAAGACATTGGTTAAAGTTT+GGG + chr1_1:64769187-64769206 None:intergenic 25.0%
!! AAAAGACATTGGTTAAAGTT+TGG + chr1_1:64774990-64775009 None:intergenic 25.0%
! TAACATATGCATTTATGTGA+TGG - chr1_1:64775216-64775235 Msa0036320:CDS 25.0%
TTCGATCGATATATTGATCT+TGG - chr1_1:64767336-64767355 Msa0036320:three_prime_UTR 30.0%
CCAGAAACAGAATTGAAATT+GGG + chr1_1:64767570-64767589 None:intergenic 30.0%
ACCAGAAACAGAATTGAAAT+TGG + chr1_1:64767571-64767590 None:intergenic 30.0%
CAAAAAAAGACTAGACATGT+TGG + chr1_1:64767638-64767657 None:intergenic 30.0%
TGGAAAAGAATAAATGTTGG+AGG + chr1_1:64767751-64767770 None:intergenic 30.0%
! CAAATCTCATTTGCATTTTC+TGG - chr1_1:64767997-64768016 Msa0036320:intron 30.0%
ATGGTATTCATCAATGTTGT+TGG - chr1_1:64768240-64768259 Msa0036320:CDS 30.0%
GTGTCTTACAAAATATGAAG+TGG + chr1_1:64768711-64768730 None:intergenic 30.0%
! TATCAACTGGTTCATCAATT+GGG - chr1_1:64768873-64768892 Msa0036320:intron 30.0%
ATTATGTTGGCATCTACAAT+TGG - chr1_1:64769087-64769106 Msa0036320:intron 30.0%
TTGTAACATCAATGCACTTT+AGG + chr1_1:64769160-64769179 None:intergenic 30.0%
CGTAGAAGAAAATTTCTGTA+GGG + chr1_1:64769365-64769384 None:intergenic 30.0%
!!! AACATGTATTTTGAAACGGA+GGG + chr1_1:64769586-64769605 None:intergenic 30.0%
!! CTGCAACATGTATTTTGAAA+CGG + chr1_1:64769590-64769609 None:intergenic 30.0%
TAGTGCACATTGTAAATTTG+CGG - chr1_1:64769789-64769808 Msa0036320:intron 30.0%
!! TGATGTTCTAAAAACACGTA+TGG - chr1_1:64769863-64769882 Msa0036320:intron 30.0%
ACTATGTTGGAAAATTGTGT+AGG - chr1_1:64769960-64769979 Msa0036320:intron 30.0%
! GTAAAGTAGCACATTTTGAA+TGG - chr1_1:64770076-64770095 Msa0036320:intron 30.0%
TGCAAATCATCTATGAATGT+TGG - chr1_1:64770147-64770166 Msa0036320:intron 30.0%
GTGTGTGAAAAATTGACAAA+AGG + chr1_1:64770322-64770341 None:intergenic 30.0%
CGAAAAATAATCAAAGCCTA+AGG - chr1_1:64770600-64770619 Msa0036320:CDS 30.0%
AACTAAGGTATAGCTTAAAG+AGG - chr1_1:64770647-64770666 Msa0036320:intron 30.0%
AGAGGATTCTTAACATGATA+TGG - chr1_1:64770665-64770684 Msa0036320:intron 30.0%
TTTCTACTAGTCACCTAAAA+AGG + chr1_1:64770703-64770722 None:intergenic 30.0%
ACAGTGGTATTTGTTTATCT+TGG + chr1_1:64770829-64770848 None:intergenic 30.0%
CAGTTATTGAATATTGACAG+TGG + chr1_1:64770845-64770864 None:intergenic 30.0%
TAGGAAACCTGTATATAGTA+GGG + chr1_1:64771189-64771208 None:intergenic 30.0%
! AGCAATAACAAAAGCACAAT+TGG - chr1_1:64771404-64771423 Msa0036320:intron 30.0%
CAATTGGCAAGAAAAACATT+AGG - chr1_1:64771420-64771439 Msa0036320:intron 30.0%
AAGAAAAACATTAGGTGGTA+GGG - chr1_1:64771428-64771447 Msa0036320:intron 30.0%
TCTTTGTGAGTGACTAAAAA+TGG - chr1_1:64771541-64771560 Msa0036320:intron 30.0%
TTATCTTGTCTTCTATGTAG+GGG - chr1_1:64771922-64771941 Msa0036320:intron 30.0%
TCTTGATGTTGTTACTATCA+TGG - chr1_1:64771953-64771972 Msa0036320:intron 30.0%
GTCTAACATTAAACACAATG+TGG - chr1_1:64771977-64771996 Msa0036320:intron 30.0%
TTCGATCGATATATTGATCT+TGG - chr1_1:64767336-64767355 Msa0036320:three_prime_UTR 30.0%
ATTGTGTATATGGTTATTGG+TGG - chr1_1:64772138-64772157 Msa0036320:intron 30.0%
TTGTGTATATGGTTATTGGT+GGG - chr1_1:64772139-64772158 Msa0036320:intron 30.0%
CACAAATCAAGCAATCTTAT+TGG - chr1_1:64772205-64772224 Msa0036320:intron 30.0%
GAAGCTGAGATAGAAAAAAA+TGG + chr1_1:64772251-64772270 None:intergenic 30.0%
CAAGCAACAGAATTGAAATT+GGG + chr1_1:64772273-64772292 None:intergenic 30.0%
ACAAGCAACAGAATTGAAAT+TGG + chr1_1:64772274-64772293 None:intergenic 30.0%
GAAGATACTACTAGACATAT+TGG + chr1_1:64772341-64772360 None:intergenic 30.0%
! GAACATTTTACAAGTGATTG+TGG + chr1_1:64772834-64772853 None:intergenic 30.0%
TTCAATTGTCAATATGTGCA+GGG + chr1_1:64772944-64772963 None:intergenic 30.0%
AGTAAGACTCAATTTCAACA+TGG - chr1_1:64772992-64773011 Msa0036320:intron 30.0%
!! TATCTTTTCAATTTGGGACT+TGG + chr1_1:64773103-64773122 None:intergenic 30.0%
TTACTAAAGAGATACTTAGG+TGG - chr1_1:64773210-64773229 Msa0036320:intron 30.0%
CATTCTTTAATCTAAGAGAC+TGG - chr1_1:64773252-64773271 Msa0036320:intron 30.0%
TTCAGTCCTCAAAATTGTAA+GGG + chr1_1:64773341-64773360 None:intergenic 30.0%
TTTCAGTCCTCAAAATTGTA+AGG + chr1_1:64773342-64773361 None:intergenic 30.0%
CTTTGCAAAACTACTAAAAG+AGG + chr1_1:64773377-64773396 None:intergenic 30.0%
ATACAATTGCACCTATTTGT+AGG + chr1_1:64773591-64773610 None:intergenic 30.0%
ACAAATAGGTGCAATTGTAT+CGG - chr1_1:64773591-64773610 Msa0036320:intron 30.0%
! CAACTATAGCCTTAATATTG+TGG - chr1_1:64773699-64773718 Msa0036320:CDS 30.0%
GTCAAAACACCACAATATTA+AGG + chr1_1:64773711-64773730 None:intergenic 30.0%
CAAATATCATTTGCATTTGC+TGG - chr1_1:64773854-64773873 Msa0036320:CDS 30.0%
AATTGTAGCTTGGATTTCAA+GGG + chr1_1:64773891-64773910 None:intergenic 30.0%
AATATCCAATGATTGCAACT+GGG + chr1_1:64773997-64774016 None:intergenic 30.0%
! ATCATTGGATATTGGACTTT+TGG - chr1_1:64774004-64774023 Msa0036320:intron 30.0%
AGCCTTACAAAATATGAAGT+GGG + chr1_1:64774542-64774561 None:intergenic 30.0%
AATTTGACATAAGCATAGAG+GGG + chr1_1:64768748-64768767 None:intergenic 30.0%
CAATTTGACATAAGCATAGA+GGG + chr1_1:64774573-64774592 None:intergenic 30.0%
ATTATCATCCACATTATGCT+AGG + chr1_1:64774662-64774681 None:intergenic 30.0%
AAAACAATTCACAGTTCCTT+TGG + chr1_1:64774806-64774825 None:intergenic 30.0%
TTAGGTGTAGAAACTATAAG+TGG + chr1_1:64774945-64774964 None:intergenic 30.0%
AACATATGCATTGTCTTTCT+AGG + chr1_1:64775135-64775154 None:intergenic 30.0%
! TATCTTCATTTGAAACTGCA+AGG - chr1_1:64775158-64775177 Msa0036320:CDS 30.0%
AGCAACTGATTGTACAAGTT+GGG - chr1_1:64767406-64767425 Msa0036320:three_prime_UTR 35.0%
GACACTGTCTATATGGTTAT+TGG - chr1_1:64767432-64767451 Msa0036320:three_prime_UTR 35.0%
ACTGTCTATATGGTTATTGG+TGG - chr1_1:64767435-64767454 Msa0036320:three_prime_UTR 35.0%
CTGTCTATATGGTTATTGGT+GGG - chr1_1:64767436-64767455 Msa0036320:three_prime_UTR 35.0%
CACAAATCAAGCAGACTTAT+TGG - chr1_1:64767502-64767521 Msa0036320:three_prime_UTR 35.0%
CTGAGACAGAAAAAAATGGA+TGG + chr1_1:64767544-64767563 None:intergenic 35.0%
GAAGCTGAGACAGAAAAAAA+TGG + chr1_1:64767548-64767567 None:intergenic 35.0%
CCCAATTTCAATTCTGTTTC+TGG - chr1_1:64767567-64767586 Msa0036320:three_prime_UTR 35.0%
GTATATGATAGGCCTGATTA+AGG - chr1_1:64767720-64767739 Msa0036320:intron 35.0%
CAGCTATTCAACTATAGCAT+GGG - chr1_1:64767876-64767895 Msa0036320:CDS 35.0%
TTCCACATTGGTATCTTTGA+GGG + chr1_1:64768075-64768094 None:intergenic 35.0%
TTTCCACATTGGTATCTTTG+AGG + chr1_1:64768076-64768095 None:intergenic 35.0%
TCAAAGATACCAATGTGGAA+AGG - chr1_1:64768075-64768094 Msa0036320:CDS 35.0%
AATATCCTAAGGTTGCAACA+GGG + chr1_1:64768140-64768159 None:intergenic 35.0%
TGTTGCAACCTTAGGATATT+GGG - chr1_1:64768140-64768159 Msa0036320:intron 35.0%
! TGTTGCTTCTGCTAATTTGA+TGG - chr1_1:64768221-64768240 Msa0036320:CDS 35.0%
GCAAATCCAAGACATGAAAT+TGG - chr1_1:64768285-64768304 Msa0036320:intron 35.0%
! TTTTCGCCAATTTCATGTCT+TGG + chr1_1:64768294-64768313 None:intergenic 35.0%
ATGGGGCAAAAATATGTTAC+AGG - chr1_1:64768395-64768414 Msa0036320:intron 35.0%
TGTCATCTTACCTACATAAG+CGG + chr1_1:64768514-64768533 None:intergenic 35.0%
! CTTTCTTTGGTGATCTTCTT+GGG - chr1_1:64768660-64768679 Msa0036320:CDS 35.0%
ATAAGCATAGAGGAATTGAG+AGG + chr1_1:64768740-64768759 None:intergenic 35.0%
TTCAGCTTCCTAGTATAATG+TGG - chr1_1:64768821-64768840 Msa0036320:intron 35.0%
! GTATCAACTGGTTCATCAAT+TGG - chr1_1:64768872-64768891 Msa0036320:intron 35.0%
CATAGGTGTGTGTATTATGT+TGG - chr1_1:64769074-64769093 Msa0036320:intron 35.0%
AGGGGACGAAAAATGAAATT+TGG + chr1_1:64769321-64769340 None:intergenic 35.0%
GCGTAGAAGAAAATTTCTGT+AGG + chr1_1:64769366-64769385 None:intergenic 35.0%
!!! CAACATGTATTTTGAAACGG+AGG + chr1_1:64769587-64769606 None:intergenic 35.0%
ATCCTACAAATGTCAAGATG+TGG - chr1_1:64770116-64770135 Msa0036320:intron 35.0%
TTCCACATCTTGACATTTGT+AGG + chr1_1:64770121-64770140 None:intergenic 35.0%
TTGTTATGACAACTATGCGA+TGG - chr1_1:64770352-64770371 Msa0036320:CDS 35.0%
!!! GTGCTGTTTAGTACCTTTTT+AGG - chr1_1:64770687-64770706 Msa0036320:intron 35.0%
!! GAGTGATGGGAACATTTTAT+TGG + chr1_1:64770900-64770919 None:intergenic 35.0%
GTAGGAAACCTGTATATAGT+AGG + chr1_1:64771190-64771209 None:intergenic 35.0%
TTGGCAAGAAAAACATTAGG+TGG - chr1_1:64771423-64771442 Msa0036320:intron 35.0%
CAAGAAAAACATTAGGTGGT+AGG - chr1_1:64771427-64771446 Msa0036320:intron 35.0%
ACTTTGATTCCAACATCCTA+GGG - chr1_1:64771509-64771528 Msa0036320:intron 35.0%
ATTACCTTAGAAGGTAGAGA+AGG + chr1_1:64771575-64771594 None:intergenic 35.0%
! TGACTTGGAATTACCTTAGA+AGG + chr1_1:64771584-64771603 None:intergenic 35.0%
TTTGTATGTTCCACAATTGC+AGG - chr1_1:64771666-64771685 Msa0036320:intron 35.0%
AACTCAAGCAGAACTAAAAG+AGG - chr1_1:64771690-64771709 Msa0036320:intron 35.0%
! CATGCTTTTGGACCAAAATT+TGG - chr1_1:64772066-64772085 Msa0036320:intron 35.0%
! ACAATCCATGCTCCAAATTT+TGG + chr1_1:64772081-64772100 None:intergenic 35.0%
AGCAACTGATTGTACAAGTT+GGG - chr1_1:64767406-64767425 Msa0036320:three_prime_UTR 35.0%
TGGGTGTGATATTGTGTATA+TGG - chr1_1:64772128-64772147 Msa0036320:intron 35.0%
! AGTGATTGTGGGTTAAAATG+TGG + chr1_1:64772822-64772841 None:intergenic 35.0%
GTTCAATTGTCAATATGTGC+AGG + chr1_1:64772945-64772964 None:intergenic 35.0%
ACACTCATCACCTTATGAAT+CGG - chr1_1:64773147-64773166 Msa0036320:intron 35.0%
!! CCTTATGAATCGGTTTTGTA+CGG - chr1_1:64773157-64773176 Msa0036320:intron 35.0%
!! CGGTTTTGTACGGATTAATT+AGG - chr1_1:64773167-64773186 Msa0036320:intron 35.0%
TAAAGAGATACTTAGGTGGA+GGG - chr1_1:64773214-64773233 Msa0036320:intron 35.0%
TTCGATATGACAGTTGATCA+AGG - chr1_1:64773540-64773559 Msa0036320:intron 35.0%
! TTAACGGTAGAGTTCTGATT+GGG + chr1_1:64773632-64773651 None:intergenic 35.0%
! TTTAACGGTAGAGTTCTGAT+TGG + chr1_1:64773633-64773652 None:intergenic 35.0%
! TCTAGCTTACACACGTTTAA+CGG + chr1_1:64773648-64773667 None:intergenic 35.0%
CAGTTATTCAACTATAGCCT+GGG - chr1_1:64773733-64773752 Msa0036320:intron 35.0%
CATAGCTAACATTGTCAATC+CGG + chr1_1:64767921-64767940 None:intergenic 35.0%
GAATTGTAGCTTGGATTTCA+AGG + chr1_1:64773892-64773911 None:intergenic 35.0%
!! GCTATCTTTGATGGTTTTTC+AGG + chr1_1:64773923-64773942 None:intergenic 35.0%
AACCATCAAAGATAGCAATG+TGG - chr1_1:64773927-64773946 Msa0036320:intron 35.0%
TTCCACATTGCTATCTTTGA+TGG + chr1_1:64773932-64773951 None:intergenic 35.0%
TCAAAGATAGCAATGTGGAA+TGG - chr1_1:64773932-64773951 Msa0036320:intron 35.0%
TATTTCCCAGTTGCAATCAT+TGG - chr1_1:64773989-64774008 Msa0036320:intron 35.0%
CAATATCCAATGATTGCAAC+TGG + chr1_1:64773998-64774017 None:intergenic 35.0%
CAGTTGCAATCATTGGATAT+TGG - chr1_1:64773996-64774015 Msa0036320:intron 35.0%
!! AAGCCATGAAGGTTTTTCAA+GGG + chr1_1:64774059-64774078 None:intergenic 35.0%
! TAAGCCATGAAGGTTTTTCA+AGG + chr1_1:64774060-64774079 None:intergenic 35.0%
ATGGTATTCATCCATGTTGT+TGG - chr1_1:64774097-64774116 Msa0036320:CDS 35.0%
! TTGCACTAATAGTTGATACC+TGG + chr1_1:64774129-64774148 None:intergenic 35.0%
AAAATGTCGTATGATCGGTT+GGG - chr1_1:64774224-64774243 Msa0036320:intron 35.0%
CTCTCAATCAAGTCAAAAAC+AGG + chr1_1:64774278-64774297 None:intergenic 35.0%
!!! CTGTTTTTGACTTGATTGAG+AGG - chr1_1:64774276-64774295 Msa0036320:intron 35.0%
! CTCCCACTTCATATTTTGTA+AGG - chr1_1:64768705-64768724 Msa0036320:CDS 35.0%
GAGCCTTACAAAATATGAAG+TGG + chr1_1:64774543-64774562 None:intergenic 35.0%
GCAATTTGACATAAGCATAG+AGG + chr1_1:64774574-64774593 None:intergenic 35.0%
! CAGTTGATGCTGAATTTCTT+TGG + chr1_1:64774692-64774711 None:intergenic 35.0%
CAAAGAAATTCAGCATCAAC+TGG - chr1_1:64774690-64774709 Msa0036320:intron 35.0%
! CATCAACTGGTTCATCAATT+GGG - chr1_1:64774703-64774722 Msa0036320:intron 35.0%
TGATCAATTGACACTAGCAT+TGG - chr1_1:64774733-64774752 Msa0036320:intron 35.0%
TATGTGTCTTTAATTCAGGC+TGG - chr1_1:64774848-64774867 Msa0036320:intron 35.0%
ATTCAGGCTGGAATTTACAT+AGG - chr1_1:64774860-64774879 Msa0036320:intron 35.0%
CATAGGTGTATGTATTATGC+TGG - chr1_1:64774877-64774896 Msa0036320:intron 35.0%
ATTGCAACATCATGCACTTT+AGG + chr1_1:64774963-64774982 None:intergenic 35.0%
CATAAAGTAGCACATGTTGA+AGG - chr1_1:64775071-64775090 Msa0036320:CDS 35.0%
! GATCTTGGTAGACATGCTTT+TGG - chr1_1:64767351-64767370 Msa0036320:three_prime_UTR 40.0%
! CATGCTTTTGGACCAAAACT+TGG - chr1_1:64767363-64767382 Msa0036320:three_prime_UTR 40.0%
! ACAATCCATGCTCCAAGTTT+TGG + chr1_1:64767378-64767397 None:intergenic 40.0%
ACTTGTACAATCAGTTGCTG+AGG + chr1_1:64767405-64767424 None:intergenic 40.0%
CAGCAACTGATTGTACAAGT+TGG - chr1_1:64767405-64767424 Msa0036320:three_prime_UTR 40.0%
CAGCATCTGTGATGTCATTA+AGG - chr1_1:64767601-64767620 Msa0036320:exon 40.0%
GCAGCTATTCAACTATAGCA+TGG - chr1_1:64767875-64767894 Msa0036320:CDS 40.0%
CTATTCAACTATAGCATGGG+TGG - chr1_1:64767879-64767898 Msa0036320:CDS 40.0%
! GAATTTCAAGTGTCACTGCT+TGG + chr1_1:64768023-64768042 None:intergenic 40.0%
AGCAGTGACACTTGAAATTC+AGG - chr1_1:64768023-64768042 Msa0036320:CDS 40.0%
!! GGTATCTTTGAGGGTTTTTC+CGG + chr1_1:64768066-64768085 None:intergenic 40.0%
AACCCTCAAAGATACCAATG+TGG - chr1_1:64768070-64768089 Msa0036320:CDS 40.0%
CAAATAGCACCTTTCCACAT+TGG + chr1_1:64768087-64768106 None:intergenic 40.0%
TATTTCCCTGTTGCAACCTT+AGG - chr1_1:64768132-64768151 Msa0036320:intron 40.0%
CAATATCCTAAGGTTGCAAC+AGG + chr1_1:64768141-64768160 None:intergenic 40.0%
CTGTTGCAACCTTAGGATAT+TGG - chr1_1:64768139-64768158 Msa0036320:intron 40.0%
! ACCTTAGGATATTGGGCTTT+TGG - chr1_1:64768147-64768166 Msa0036320:intron 40.0%
TCCAAAAGCCCAATATCCTA+AGG + chr1_1:64768151-64768170 None:intergenic 40.0%
! TGTCACTTGAAAGACCTTCA+TGG - chr1_1:64768196-64768215 Msa0036320:intron 40.0%
!! CAATGTTGTTGGTAGTTACC+AGG - chr1_1:64768251-64768270 Msa0036320:CDS 40.0%
AATCAAGTCGAAAACAGGCA+TGG + chr1_1:64768427-64768446 None:intergenic 40.0%
!! CCTGTTTTCGACTTGATTGA+GGG - chr1_1:64768429-64768448 Msa0036320:intron 40.0%
!! CTGTTTTCGACTTGATTGAG+GGG - chr1_1:64768430-64768449 Msa0036320:intron 40.0%
CCAAGAAGATCACCAAAGAA+AGG + chr1_1:64768662-64768681 None:intergenic 40.0%
! CCTTTCTTTGGTGATCTTCT+TGG - chr1_1:64768659-64768678 Msa0036320:CDS 40.0%
!! GGTTGATAATCAAGAAGCCA+AGG - chr1_1:64768842-64768861 Msa0036320:intron 40.0%
! CAGTTGATACTGAATCTCCT+TGG + chr1_1:64768862-64768881 None:intergenic 40.0%
CAAGGAGATTCAGTATCAAC+TGG - chr1_1:64768860-64768879 Msa0036320:intron 40.0%
TTTCAGGCTGCAATTTGCAT+AGG - chr1_1:64769057-64769076 Msa0036320:intron 40.0%
ATGTTGGCATCTACAATTGG+TGG - chr1_1:64769090-64769109 Msa0036320:intron 40.0%
! TTGCGGCATGTATTCTGAAA+CGG - chr1_1:64769806-64769825 Msa0036320:intron 40.0%
! GTAGCACATTTTGAATGGCA+TGG - chr1_1:64770081-64770100 Msa0036320:intron 40.0%
! CATTTTGAATGGCATGGTGT+AGG - chr1_1:64770087-64770106 Msa0036320:intron 40.0%
! TTTAACTTAGTGGAAGGGAG+CGG + chr1_1:64770749-64770768 None:intergenic 40.0%
! CGCTGTTTAACTTAGTGGAA+GGG + chr1_1:64770754-64770773 None:intergenic 40.0%
! TCGCTGTTTAACTTAGTGGA+AGG + chr1_1:64770755-64770774 None:intergenic 40.0%
TTCCTACGTTGTAACTAGAC+AGG - chr1_1:64771203-64771222 Msa0036320:intron 40.0%
TCCTACGTTGTAACTAGACA+GGG - chr1_1:64771204-64771223 Msa0036320:intron 40.0%
CACTTTGATTCCAACATCCT+AGG - chr1_1:64771508-64771527 Msa0036320:intron 40.0%
ACAAAGAATGAGAAGACCCT+AGG + chr1_1:64771528-64771547 None:intergenic 40.0%
TCAAGCAGAACTAAAAGAGG+TGG - chr1_1:64771693-64771712 Msa0036320:intron 40.0%
TTACCATCCTAGATATGCCA+TGG + chr1_1:64771812-64771831 None:intergenic 40.0%
AGTAACAACATCAAGATCCC+TGG + chr1_1:64771949-64771968 None:intergenic 40.0%
! GATCTTGGTAGACATGCTTT+TGG - chr1_1:64767351-64767370 Msa0036320:three_prime_UTR 40.0%
! TTGGACCAAAATTTGGAGCA+TGG - chr1_1:64772073-64772092 Msa0036320:intron 40.0%
ACTTGTACAATCAGTTGCTG+AGG + chr1_1:64767405-64767424 None:intergenic 40.0%
CAGCAACTGATTGTACAAGT+TGG - chr1_1:64767405-64767424 Msa0036320:three_prime_UTR 40.0%
! GAAGTGTCTAAAGCAGTTTG+TGG - chr1_1:64772161-64772180 Msa0036320:intron 40.0%
TCAGGGAAACTCACCAAAAA+AGG + chr1_1:64772579-64772598 None:intergenic 40.0%
CTAAAACCCTTGCAATCTCA+GGG + chr1_1:64772596-64772615 None:intergenic 40.0%
ACTAAAACCCTTGCAATCTC+AGG + chr1_1:64772597-64772616 None:intergenic 40.0%
ATATTTATGTTGGGCCACGA+GGG - chr1_1:64772741-64772760 Msa0036320:intron 40.0%
ACTCAGTTGTATGGTTGTTG+TGG + chr1_1:64772793-64772812 None:intergenic 40.0%
!! ATGATGGACTCACACTTGAA+GGG + chr1_1:64772917-64772936 None:intergenic 40.0%
!! AATGATGGACTCACACTTGA+AGG + chr1_1:64772918-64772937 None:intergenic 40.0%
ATATGTGCAGGGAAGAATGA+TGG + chr1_1:64772933-64772952 None:intergenic 40.0%
! CCGTACAAAACCGATTCATA+AGG + chr1_1:64773160-64773179 None:intergenic 40.0%
CTAAAGAGATACTTAGGTGG+AGG - chr1_1:64773213-64773232 Msa0036320:intron 40.0%
! TACCGACCCTTACAATTTTG+AGG - chr1_1:64773332-64773351 Msa0036320:intron 40.0%
GTCCTCAAAATTGTAAGGGT+CGG + chr1_1:64773337-64773356 None:intergenic 40.0%
GTGAAACAATTCAGAAGCAG+CGG - chr1_1:64773411-64773430 Msa0036320:intron 40.0%
GCAGTTATTCAACTATAGCC+TGG - chr1_1:64773732-64773751 Msa0036320:intron 40.0%
TTATTCAACTATAGCCTGGG+TGG - chr1_1:64773736-64773755 Msa0036320:intron 40.0%
TTCAGAGTCTTCAATGCACT+TGG - chr1_1:64773830-64773849 Msa0036320:intron 40.0%
! GTGTTGATGGAATTGTAGCT+TGG + chr1_1:64773901-64773920 None:intergenic 40.0%
!!! GATGGTTTTTCAGGTGTTGA+TGG + chr1_1:64773914-64773933 None:intergenic 40.0%
TGTCCCTTGAAAAACCTTCA+TGG - chr1_1:64774053-64774072 Msa0036320:CDS 40.0%
TATTGCCTCTGCTAACTTGA+TGG - chr1_1:64774078-64774097 Msa0036320:CDS 40.0%
GAATACCATCAAGTTAGCAG+AGG + chr1_1:64774086-64774105 None:intergenic 40.0%
GAAAATGTCGTATGATCGGT+TGG - chr1_1:64774223-64774242 Msa0036320:intron 40.0%
AGGTAAGATGTCAAAACTCG+AGG - chr1_1:64774367-64774386 Msa0036320:CDS 40.0%
CCAAGAAGATCACCAAAGAA+TGG + chr1_1:64768662-64768681 None:intergenic 40.0%
! CCATTCTTTGGTGATCTTCT+TGG - chr1_1:64774491-64774510 Msa0036320:CDS 40.0%
GGTGATCTTCTTGGTTTCTT+TGG - chr1_1:64774500-64774519 Msa0036320:CDS 40.0%
GATCTTCTTGGTTTCTTTGG+TGG - chr1_1:64774503-64774522 Msa0036320:CDS 40.0%
!! CTTGGTTTCTTTGGTGGATT+TGG - chr1_1:64774509-64774528 Msa0036320:CDS 40.0%
TTCAGCTTCCTAGCATAATG+TGG - chr1_1:64774651-64774670 Msa0036320:CDS 40.0%
! GCATCAACTGGTTCATCAAT+TGG - chr1_1:64774702-64774721 Msa0036320:intron 40.0%
ATTATGCTGGCATCAACAGT+TGG - chr1_1:64774890-64774909 Msa0036320:intron 40.0%
! ACATGTTGAAGGCATAGTCT+AGG - chr1_1:64775082-64775101 Msa0036320:CDS 40.0%
TGAAACTGCAAGGATACCAA+AGG - chr1_1:64775168-64775187 Msa0036320:CDS 40.0%
GAAACTGCAAGGATACCAAA+GGG - chr1_1:64775169-64775188 Msa0036320:CDS 40.0%
CAAGGATACCAAAGGGAAAA+GGG - chr1_1:64775176-64775195 Msa0036320:CDS 40.0%
TATCGATCGAAACGAGTTCC+CGG + chr1_1:64767327-64767346 None:intergenic 45.0%
TTGGACCAAAACTTGGAGCA+TGG - chr1_1:64767370-64767389 Msa0036320:three_prime_UTR 45.0%
TGGGTGTGACACTGTCTATA+TGG - chr1_1:64767425-64767444 Msa0036320:three_prime_UTR 45.0%
TTGGAGGCTGATCCTTAATC+AGG + chr1_1:64767735-64767754 None:intergenic 45.0%
!! TGGCTTGCTTATCTAGAGGT+CGG - chr1_1:64767899-64767918 Msa0036320:intron 45.0%
TTCAGAGTCTTCAGTGCACT+TGG - chr1_1:64767973-64767992 Msa0036320:intron 45.0%
GGCTACAATTCCATCAACAC+CGG - chr1_1:64768044-64768063 Msa0036320:CDS 45.0%
!! GTTGTTGGTAGTTACCAGGT+AGG - chr1_1:64768255-64768274 Msa0036320:intron 45.0%
GATTTGCATAGAGACCTACC+TGG + chr1_1:64768272-64768291 None:intergenic 45.0%
!! GCCTGTTTTCGACTTGATTG+AGG - chr1_1:64768428-64768447 Msa0036320:intron 45.0%
CCCTCAATCAAGTCGAAAAC+AGG + chr1_1:64768432-64768451 None:intergenic 45.0%
ACAAGTCTAAGCGCTACACT+AGG + chr1_1:64768483-64768502 None:intergenic 45.0%
! GGGGTGAGTTTTCCTTTCTT+TGG - chr1_1:64768647-64768666 Msa0036320:CDS 45.0%
GGTGATCTTCTTGGGTTCTT+TGG - chr1_1:64768668-64768687 Msa0036320:intron 45.0%
GATCTTCTTGGGTTCTTTGG+TGG - chr1_1:64768671-64768690 Msa0036320:intron 45.0%
!! CTTGGGTTCTTTGGTGGATT+TGG - chr1_1:64768677-64768696 Msa0036320:intron 45.0%
! CATCTACAATTGGTGGCTTG+AGG - chr1_1:64769097-64769116 Msa0036320:intron 45.0%
GTATATTGGCATGTGTGCAG+TGG + chr1_1:64769617-64769636 None:intergenic 45.0%
!! GGCATGTATTCTGAAACGGA+GGG - chr1_1:64769810-64769829 Msa0036320:intron 45.0%
TACTTGAGACCGACAAAGCT+TGG + chr1_1:64770561-64770580 None:intergenic 45.0%
! GCTGTCGCTGTTTAACTTAG+TGG + chr1_1:64770759-64770778 None:intergenic 45.0%
ACCCTGTCTAGTTACAACGT+AGG + chr1_1:64771208-64771227 None:intergenic 45.0%
ACGTTGTAACTAGACAGGGT+TGG - chr1_1:64771208-64771227 Msa0036320:intron 45.0%
ATGAGAAGACCCTAGGATGT+TGG + chr1_1:64771521-64771540 None:intergenic 45.0%
CTTAGAAGGTAGAGAAGGAG+TGG + chr1_1:64771570-64771589 None:intergenic 45.0%
CACTCCTTCTCTACCTTCTA+AGG - chr1_1:64771568-64771587 Msa0036320:intron 45.0%
GCTTGAGTTTCCTGCAATTG+TGG + chr1_1:64771679-64771698 None:intergenic 45.0%
GAAAGTCGAGTACCACCATT+TGG + chr1_1:64771740-64771759 None:intergenic 45.0%
CCTAGATATGCCATGGCATA+TGG + chr1_1:64771805-64771824 None:intergenic 45.0%
CCATATGCCATGGCATATCT+AGG - chr1_1:64771802-64771821 Msa0036320:intron 45.0%
ATGCCATGGCATATCTAGGA+TGG - chr1_1:64771806-64771825 Msa0036320:intron 45.0%
CCAGCTACATGAATGTGTAC+CGG - chr1_1:64772008-64772027 Msa0036320:intron 45.0%
CAGCTACATGAATGTGTACC+GGG - chr1_1:64772009-64772028 Msa0036320:intron 45.0%
TATCGATCGAAACGAGTTCC+CGG + chr1_1:64767327-64767346 None:intergenic 45.0%
TGAGTTTCCCTGAGATTGCA+AGG - chr1_1:64772586-64772605 Msa0036320:intron 45.0%
GAGTTTCCCTGAGATTGCAA+GGG - chr1_1:64772587-64772606 Msa0036320:intron 45.0%
GATATTTATGTTGGGCCACG+AGG - chr1_1:64772740-64772759 Msa0036320:intron 45.0%
TGGTGTGCAACTCAGTTGTA+TGG + chr1_1:64772802-64772821 None:intergenic 45.0%
TTGGTGTGTGGATATGTAGG+TGG + chr1_1:64773040-64773059 None:intergenic 45.0%
CCTTCACGTCCAACATCATT+GGG + chr1_1:64773064-64773083 None:intergenic 45.0%
CCAATGATGTTGGACGTGAA+GGG - chr1_1:64773062-64773081 Msa0036320:intron 45.0%
AGCAGCGGCAAATAAACAGT+TGG - chr1_1:64773426-64773445 Msa0036320:intron 45.0%
TACAAGTCTAAGCGCTACAC+CGG + chr1_1:64768484-64768503 None:intergenic 45.0%
GTAGCTCGATCTGCTTATGT+AGG - chr1_1:64774347-64774366 Msa0036320:CDS 45.0%
!!! GGGGTCACTTTTCCATTCTT+TGG - chr1_1:64774479-64774498 Msa0036320:CDS 45.0%
GCAAGGATACCAAAGGGAAA+AGG - chr1_1:64775175-64775194 Msa0036320:CDS 45.0%
! GCAAATTGCCCTTTTCCCTT+TGG + chr1_1:64775187-64775206 None:intergenic 45.0%
!! TGGGTGGCTTGCTTATCTAG+AGG - chr1_1:64767895-64767914 Msa0036320:intron 50.0%
!! GAGGGTTTTTCCGGTGTTGA+TGG + chr1_1:64768057-64768076 None:intergenic 50.0%
GCAGAAGCAACAAGCCATGA+AGG + chr1_1:64768213-64768232 None:intergenic 50.0%
GTCTAAGCGCTACACTAGGA+GGG + chr1_1:64768479-64768498 None:intergenic 50.0%
AGTCTAAGCGCTACACTAGG+AGG + chr1_1:64768480-64768499 None:intergenic 50.0%
GTAGCTCGATCCGCTTATGT+AGG - chr1_1:64768501-64768520 Msa0036320:CDS 50.0%
!! CGGCATGTATTCTGAAACGG+AGG - chr1_1:64769809-64769828 Msa0036320:intron 50.0%
CCGACAAAGCTTGGTCTGAT+CGG + chr1_1:64770552-64770571 None:intergenic 50.0%
! CCGATCAGACCAAGCTTTGT+CGG - chr1_1:64770549-64770568 Msa0036320:CDS 50.0%
TCGAGTACCACCATTTGGCT+CGG + chr1_1:64771735-64771754 None:intergenic 50.0%
GTGGTACTCGACTTTCCACA+CGG - chr1_1:64771744-64771763 Msa0036320:intron 50.0%
ATATGGCAGGCTGAGAACAC+CGG + chr1_1:64771788-64771807 None:intergenic 50.0%
GATATGCCATGGCATATGGC+AGG + chr1_1:64771801-64771820 None:intergenic 50.0%
TGTCTTCTATGTAGGGGTCC+AGG - chr1_1:64771928-64771947 Msa0036320:intron 50.0%
GTCTTCTATGTAGGGGTCCA+GGG - chr1_1:64771929-64771948 Msa0036320:intron 50.0%
CCGGTACACATTCATGTAGC+TGG + chr1_1:64772011-64772030 None:intergenic 50.0%
CTCAACGTGGATGATCTTCC+GGG + chr1_1:64772770-64772789 None:intergenic 50.0%
GCTCAACGTGGATGATCTTC+CGG + chr1_1:64772771-64772790 None:intergenic 50.0%
ATGGTTGTTGTGGCTCAACG+TGG + chr1_1:64772783-64772802 None:intergenic 50.0%
!! GGCTTGGTGTGTGGATATGT+AGG + chr1_1:64773043-64773062 None:intergenic 50.0%
!! ACATCATTGGGCTTGGTGTG+TGG + chr1_1:64773052-64773071 None:intergenic 50.0%
CACACCAAGCCCAATGATGT+TGG - chr1_1:64773052-64773071 Msa0036320:intron 50.0%
ACGTCCAACATCATTGGGCT+TGG + chr1_1:64773059-64773078 None:intergenic 50.0%
CCCAATGATGTTGGACGTGA+AGG - chr1_1:64773061-64773080 Msa0036320:intron 50.0%
CCCTTCACGTCCAACATCAT+TGG + chr1_1:64773065-64773084 None:intergenic 50.0%
! GGTAGAGTTCTGATTGGGTC+TGG + chr1_1:64773627-64773646 None:intergenic 50.0%
TCTAGATAAGCAAGCCACCC+AGG + chr1_1:64767896-64767915 None:intergenic 50.0%
!! TGGGTGGCTTGCTTATCTAG+AGG - chr1_1:64767895-64767914 Msa0036320:intron 50.0%
!! TGGCTTGCTTATCTAGAGGC+CGG - chr1_1:64773756-64773775 Msa0036320:intron 50.0%
GCAGAGGCAATAAGCCATGA+AGG + chr1_1:64774070-64774089 None:intergenic 50.0%
CCTGGTAGCTACCAACAACA+TGG + chr1_1:64774111-64774130 None:intergenic 50.0%
!! CCATGTTGTTGGTAGCTACC+AGG - chr1_1:64774108-64774127 Msa0036320:CDS 50.0%
CGAAGATTGAACTTCCCTCC+CGG - chr1_1:64768462-64768481 Msa0036320:intron 50.0%
ACAAGTCTAAGCGCTACACC+GGG + chr1_1:64774329-64774348 None:intergenic 50.0%
ATGCTGGCATCAACAGTTGG+TGG - chr1_1:64774893-64774912 Msa0036320:intron 50.0%
!! CATCAACAGTTGGTGGCTTG+AGG - chr1_1:64774900-64774919 Msa0036320:intron 50.0%
CGACTTGATTGAGGGGACGA+TGG - chr1_1:64768437-64768456 Msa0036320:intron 55.0%
CTATCATGGCTGTCACCGTG+TGG + chr1_1:64771762-64771781 None:intergenic 55.0%
CACACGGTGACAGCCATGAT+AGG - chr1_1:64771760-64771779 Msa0036320:intron 55.0%
GTGACAGCCATGATAGGTGC+CGG - chr1_1:64771766-64771785 Msa0036320:intron 55.0%
GAGAACACCGGCACCTATCA+TGG + chr1_1:64771776-64771795 None:intergenic 55.0%
TCTCAGCCTGCCATATGCCA+TGG - chr1_1:64771792-64771811 Msa0036320:intron 55.0%
AGCTAGCTCAGCAAGCACCA+AGG + chr1_1:64772403-64772422 None:intergenic 55.0%
GTCTAAGCGCTACACCGGGA+GGG + chr1_1:64774325-64774344 None:intergenic 60.0%
AGTCTAAGCGCTACACCGGG+AGG + chr1_1:64774326-64774345 None:intergenic 60.0%
!! ACCATTTGGCTCGGCGAGCG+GGG + chr1_1:64771726-64771745 None:intergenic 65.0%
!! CACCATTTGGCTCGGCGAGC+GGG + chr1_1:64771727-64771746 None:intergenic 65.0%
!! CCACCATTTGGCTCGGCGAG+CGG + chr1_1:64771728-64771747 None:intergenic 65.0%
GATCTTCCGGGCTTCCCTCG+TGG + chr1_1:64772758-64772777 None:intergenic 65.0%
ACCCCGCTCGCCGAGCCAAA+TGG - chr1_1:64771722-64771741 Msa0036320:intron 70.0%
CCGCTCGCCGAGCCAAATGG+TGG - chr1_1:64771725-64771744 Msa0036320:intron 70.0%
GTTGGGCCACGAGGGAAGCC+CGG - chr1_1:64772749-64772768 Msa0036320:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 64767309 64775257 64767309 ID=Msa0036320;Name=Msa0036320
chr1_1 mRNA 64767309 64775257 64767309 ID=Msa0036320-mRNA-1;Parent=Msa0036320;Name=Msa0036320-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.62|0.47|1|0.68|0.47|17|293|721
chr1_1 exon 64767309 64767700 64767309 ID=Msa0036320-mRNA-1:exon:20833;Parent=Msa0036320-mRNA-1
chr1_1 exon 64767842 64767910 64767842 ID=Msa0036320-mRNA-1:exon:20832;Parent=Msa0036320-mRNA-1
chr1_1 exon 64768013 64768104 64768013 ID=Msa0036320-mRNA-1:exon:20831;Parent=Msa0036320-mRNA-1
chr1_1 exon 64768198 64768270 64768198 ID=Msa0036320-mRNA-1:exon:20830;Parent=Msa0036320-mRNA-1
chr1_1 exon 64768467 64768681 64768467 ID=Msa0036320-mRNA-1:exon:20829;Parent=Msa0036320-mRNA-1
chr1_1 exon 64768691 64768830 64768691 ID=Msa0036320-mRNA-1:exon:20828;Parent=Msa0036320-mRNA-1
chr1_1 exon 64770241 64770401 64770241 ID=Msa0036320-mRNA-1:exon:20827;Parent=Msa0036320-mRNA-1
chr1_1 exon 64770417 64770624 64770417 ID=Msa0036320-mRNA-1:exon:20826;Parent=Msa0036320-mRNA-1
chr1_1 exon 64770739 64770878 64770739 ID=Msa0036320-mRNA-1:exon:20825;Parent=Msa0036320-mRNA-1
chr1_1 exon 64773438 64773503 64773438 ID=Msa0036320-mRNA-1:exon:20824;Parent=Msa0036320-mRNA-1
chr1_1 exon 64773672 64773740 64773672 ID=Msa0036320-mRNA-1:exon:20823;Parent=Msa0036320-mRNA-1
chr1_1 exon 64773845 64773936 64773845 ID=Msa0036320-mRNA-1:exon:20822;Parent=Msa0036320-mRNA-1
chr1_1 exon 64774044 64774149 64774044 ID=Msa0036320-mRNA-1:exon:20821;Parent=Msa0036320-mRNA-1
chr1_1 exon 64774294 64774412 64774294 ID=Msa0036320-mRNA-1:exon:20820;Parent=Msa0036320-mRNA-1
chr1_1 exon 64774470 64774687 64774470 ID=Msa0036320-mRNA-1:exon:20819;Parent=Msa0036320-mRNA-1
chr1_1 exon 64774944 64775104 64774944 ID=Msa0036320-mRNA-1:exon:20818;Parent=Msa0036320-mRNA-1
chr1_1 exon 64775120 64775257 64775120 ID=Msa0036320-mRNA-1:exon:20817;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64775120 64775257 64775120 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64774944 64775104 64774944 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64774470 64774687 64774470 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64774294 64774412 64774294 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64774044 64774149 64774044 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64773845 64773936 64773845 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64773672 64773740 64773672 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64773438 64773503 64773438 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64770739 64770878 64770739 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64770417 64770624 64770417 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64770241 64770401 64770241 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64768691 64768830 64768691 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64768467 64768681 64768467 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64768198 64768270 64768198 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64768013 64768104 64768013 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64767842 64767910 64767842 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 CDS 64767602 64767700 64767602 ID=Msa0036320-mRNA-1:cds;Parent=Msa0036320-mRNA-1
chr1_1 three_prime_UTR 64767309 64767601 64767309 ID=Msa0036320-mRNA-1:three_prime_utr;Parent=Msa0036320-mRNA-1
Gene Sequence

>Msa0036320

CTACATGAATGTGTACCGGGAACTCGTTTCGATCGATATATTGATCTTGGTAGACATGCTTTTGGACCAAAACTTGGAGCATGGATTGTTCTACCTCAGCAACTGATTGTACAAGTTGGGTGTGACACTGTCTATATGTGTCTAAAGAATTTTGTTGAGATAGCATTCATCAATTGTACACAAATCAAGCAGACTTATTGGATTATGATTTTTGGTGCCATCCATTTTTTTCTGTCTCAGCTTCCCAATTTCAATTCTGTTTCTGGTGTTTCTTTAGCAGCATCTGTGATGTCATTAAGCTATTCAACTATAGCATGGGTGGCTTGCTTATCTAGAGGTCGGATTGACAATGTTAGCTATGCATACAAGCAAATAAGCAAAACTGATTTATTGTTCAGAGTCTTCAGTGCACTTGGTCAAATCTCATTTGCATTTTCTGGCCAAGCAGTGACACTTGAAATTCAGGCTACAATTCCATCAACACCGGAAAAACCCTCAAAGATACCAATGTGGAAAGGATATTGGGCTTTTGGACAAGATGTTGATGATAACATACTTATGTCACTTGAAAGACCTTCATGGCTTGTTGCTTCTGCTAATTTGATGGTATTCATCAATGTTGTTGGTAGTTACCAGGTTTATGCCATGCCTGTTTTCGACTTGATTGAGGGGACGATGGTTCGAAGATTGAACTTCCCTCCTAGTGTAGCGCTTAGACTTGTAGCTCGATCCGCTTATGTAGCTTTTACATTATTATTTGGGGTGAGTTTTCCTTTCTTTGGTGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGTATAATGTGGTTGATAATCAAGAAGCCAAGGAGATTCAGTATCAACTGGTTCATCAATTGGGCTGCAATTTGCATAGGTGTGTGTATTATGTTGGCATCTACAATTGGTGGCTTGAGGAACATTATTGAAACTCAAGCAGAACTAAAAGAGGTGGAGAATGACCCCGCTCGCCGAGCCAAATGGTGGTACTCGACTTTCCACACGGTGACAGCCATGATAGGTGCCGGTGTTCTCAGCCTGCCATATGCCATGGCATATCTAGGATGGGGTCCAGGGATCTTGATGTTGTTACTATCATGGTGTCTAACATTAAACACAATGTGGCAAATGATCCAGCTACATGAATGTGTACCGGGAACTCGTTTCGATCGATATATTGATCTTGGTAGACATGCTTTTGGACCAAAATTTGGAGCATGGATTGTTCTACCTCAGCAACTGATTGTACAAGTTGGGTGTGATATTGTGTATATGTGTCTAAAGCAGTTTGTGGAGATAGCATGCACTGATTGTACACAAATCAAGCAATCTTATTGGATTTTGATTTTTGGTGGCATCCATTTTTTTCTATCTCAGCTTCCCAATTTCAATTCTGTTGCTTGTGTTTCTTTAGCAGCAGCTGCGATGTCATTAAGTTATTCAACTATAGCCTGGGTGGCTTGCTTATCTAGAGGCCGGATTGACAATGTTAGCTATGCATACAAACCAATCAGCAAAATTGATTTAATGTTCAGAGTCTTCAATGCACTTGGTCAAATATCATTTGCATTTGCTGTGACCCTTGAAATCCAAGCTACAATTCCATCAACACCTGAAAAACCATCAAAGATAGCAATGTGGAATGGTGCTATTTGTGCCTATTTCATCAATGCAATATGTTATTTCCCAGTTGCAATCATTGGATATTGGACTTTTGGACAAGATGTTAATGATAATATACTAATGTCCCTTGAAAAACCTTCATGGCTTATTGCCTCTGCTAACTTGATGAGGATGATGATGCGAAGATTGAACTTCCCTCCCGGTGTAGCGCTTAGACTTGTAGCTCGATCTGCTTATGTAGCTTTTACATTATTCTTTGGGGTCACTTTTCCATTCTTTGGTGATCTTCTTGGTTTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGCATAATGTGGATGATAATCAAGAAACCAAAGAAATTCAGCATCAACTGGTTCATCAATTGGGCTGGAATTTACATAGGTGTATGTATTATGCTGGCATCAACAGTTGGTGGCTTGAGGAACATTATTGCTGATTCATCCACTTATAGTTTCTACACCTAA
Protein sequence

>Msa0036320

LHECVPGTRFDRYIDLGRHAFGPKLGAWIVLPQQLIVQVGCDTVYMCLKNFVEIAFINCTQIKQTYWIMIFGAIHFFLSQLPNFNSVSGVSLAASVMSLSYSTIAWVACLSRGRIDNVSYAYKQISKTDLLFRVFSALGQISFAFSGQAVTLEIQATIPSTPEKPSKIPMWKGYWAFGQDVDDNILMSLERPSWLVASANLMVFINVVGSYQVYAMPVFDLIEGTMVRRLNFPPSVALRLVARSAYVAFTLLFGVSFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPRRFSINWFINWAAICIGVCIMLASTIGGLRNIIETQAELKEVENDPARRAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWGPGILMLLLSWCLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKFGAWIVLPQQLIVQVGCDIVYMCLKQFVEIACTDCTQIKQSYWILIFGGIHFFLSQLPNFNSVACVSLAAAAMSLSYSTIAWVACLSRGRIDNVSYAYKPISKIDLMFRVFNALGQISFAFAVTLEIQATIPSTPEKPSKIAMWNGAICAYFINAICYFPVAIIGYWTFGQDVNDNILMSLEKPSWLIASANLMRMMMRRLNFPPGVALRLVARSAYVAFTLFFGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWMIIKKPKKFSINWFINWAGIYIGVCIMLASTVGGLRNIIADSSTYSFYT*