Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039910 | XP_013469727.1 | 98.925 | 465 | 5 | 0 | 1 | 465 | 1 | 465 | 0.0 | 947 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039910 | sp|Q9LIK9|APS1_ARATH | 81.290 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039910 | Msa0180790 | 0.809168 | 2.161663e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039910 | MtrunA17_Chr1g0204511 | 98.925 | 465 | 5 | 0 | 1 | 465 | 1 | 465 | 0.0 | 947 |
| Msa0039910 | MtrunA17_Chr6g0456031 | 75.650 | 423 | 103 | 0 | 38 | 460 | 60 | 482 | 0.0 | 680 |
| Msa0039910 | MtrunA17_Chr6g0456021 | 63.380 | 71 | 26 | 0 | 390 | 460 | 10 | 80 | 1.01e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039910 | AT3G22890.1 | 81.290 | 465 | 85 | 1 | 1 | 465 | 1 | 463 | 0.0 | 783 |
| Msa0039910 | AT4G14680.1 | 77.991 | 468 | 97 | 3 | 1 | 465 | 1 | 465 | 0.0 | 752 |
| Msa0039910 | AT5G43780.1 | 77.586 | 464 | 102 | 2 | 2 | 463 | 3 | 466 | 0.0 | 739 |
| Msa0039910 | AT1G19920.1 | 76.904 | 407 | 94 | 0 | 45 | 451 | 57 | 463 | 0.0 | 677 |
| Msa0039910 | AT4G14680.2 | 77.030 | 431 | 93 | 3 | 1 | 428 | 1 | 428 | 0.0 | 676 |
Find 189 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTAAACATTCTTCCTTTC+AGG | 0.137830 | 1_1:-69890893 | Msa0039910:CDS |
| CCGGGCTATCCTTTCTTCTT+TGG | 0.163995 | 1_1:+69892006 | None:intergenic |
| GAGCCATCCCAAACTTTATT+AGG | 0.164478 | 1_1:+69890310 | None:intergenic |
| CCGCAAGCGGCTTCTTGATA+TGG | 0.186607 | 1_1:-69891738 | Msa0039910:CDS |
| CGGGCTATCCTTTCTTCTTT+GGG | 0.223543 | 1_1:+69892007 | None:intergenic |
| CTCTGATGGGAGGGGCAAAA+TGG | 0.227116 | 1_1:+69894263 | None:intergenic |
| CCAAACTTTATTAGGGGATT+AGG | 0.255588 | 1_1:+69890318 | None:intergenic |
| GTGAGAAGGGAAAGAGGTTT+TGG | 0.256344 | 1_1:+69894309 | None:intergenic |
| CCTAATCCCCTAATAAAGTT+TGG | 0.276547 | 1_1:-69890318 | Msa0039910:three_prime_UTR |
| TCTGAGTTTCTGATTGGTTC+TGG | 0.283516 | 1_1:+69894216 | None:intergenic |
| AGCCATCCCAAACTTTATTA+GGG | 0.307132 | 1_1:+69890311 | None:intergenic |
| CTATAACTAATGCTGGAAAT+TGG | 0.315885 | 1_1:-69891940 | Msa0039910:CDS |
| TGACAAGACTCAGGGTAAAA+TGG | 0.330940 | 1_1:-69890776 | Msa0039910:CDS |
| AGTGGATGAAGGAGGGTAGA+AGG | 0.341852 | 1_1:+69894427 | None:intergenic |
| GAGTTCAAGATTGAATTAAT+AGG | 0.345039 | 1_1:+69890117 | None:intergenic |
| GTGCATGGGAGACGGGAATA+TGG | 0.346185 | 1_1:+69891088 | None:intergenic |
| GTGAATTGAAATGAAGCGTT+TGG | 0.352161 | 1_1:+69893993 | None:intergenic |
| GGCCATTGTGGACAGGGTTC+CGG | 0.360528 | 1_1:+69891783 | None:intergenic |
| ACTTAAAGTTTCTCCCAATC+AGG | 0.362842 | 1_1:+69890387 | None:intergenic |
| ACAAAATCCTGAGGCCTTGA+TGG | 0.363166 | 1_1:+69890742 | None:intergenic |
| CACTAGACCGGAACAGGTTC+CGG | 0.365121 | 1_1:+69890429 | None:intergenic |
| TTCAGCCACCACACCTTCAA+TGG | 0.366346 | 1_1:-69894353 | Msa0039910:exon |
| GAGCAGTTGTTCCCCAAGTC+CGG | 0.369560 | 1_1:+69891987 | None:intergenic |
| TTTCAAAGATTGATGTTGAA+TGG | 0.369904 | 1_1:-69894081 | Msa0039910:CDS |
| TTCAAGCAATGGCAAAGTTC+CGG | 0.370171 | 1_1:-69890448 | Msa0039910:CDS |
| CAAAGTTCCGGAACCTGTTC+CGG | 0.376156 | 1_1:-69890436 | Msa0039910:CDS |
| AAAATGGGTATCAAACGTTT+TGG | 0.377383 | 1_1:+69894279 | None:intergenic |
| ACATTGCCTCTCTGTAAGTA+TGG | 0.388638 | 1_1:-69890275 | Msa0039910:three_prime_UTR |
| GTTATAGTTTCTTCAGCATA+AGG | 0.393434 | 1_1:+69891956 | None:intergenic |
| CATATCAAGAAGCCGCTTGC+GGG | 0.394862 | 1_1:+69891739 | None:intergenic |
| TACTCTTTGAGAATGGCAAC+AGG | 0.396818 | 1_1:+69893848 | None:intergenic |
| CGCAAGCGGCTTCTTGATAT+GGG | 0.397191 | 1_1:-69891737 | Msa0039910:CDS |
| TTTAATGTATAAACCTGATT+GGG | 0.399533 | 1_1:-69890400 | Msa0039910:three_prime_UTR |
| GGGATTAGGCCATGAGATCT+TGG | 0.399964 | 1_1:+69890332 | None:intergenic |
| CTAATCCCCTAATAAAGTTT+GGG | 0.400182 | 1_1:-69890317 | Msa0039910:three_prime_UTR |
| ATTGTGGTTTGCAAAGGATT+TGG | 0.400692 | 1_1:-69890201 | Msa0039910:three_prime_UTR |
| TTCATCCGGTTTGATTGAAC+CGG | 0.402859 | 1_1:-69894191 | Msa0039910:CDS |
| TGAACCGGATGGTGGAAAAT+TGG | 0.405429 | 1_1:-69894176 | Msa0039910:CDS |
| ACGGGATGGCCCATGCCTGC+AGG | 0.410318 | 1_1:+69890984 | None:intergenic |
| GATTTATGTGCCCTGGTGGC+TGG | 0.411095 | 1_1:-69890506 | Msa0039910:CDS |
| TGTGGACAGGGTTCCGGAGC+TGG | 0.411510 | 1_1:+69891789 | None:intergenic |
| CTTAAACATTCTTCCTTTCA+GGG | 0.415924 | 1_1:-69890892 | Msa0039910:intron |
| CTGTGTTTGCGTTCCAGCTC+CGG | 0.416559 | 1_1:-69891802 | Msa0039910:CDS |
| TTCAAAGATTGATGTTGAAT+GGG | 0.419355 | 1_1:-69894080 | Msa0039910:CDS |
| ATCAGAGTCAACGTAGCAAT+TGG | 0.420035 | 1_1:-69894247 | Msa0039910:CDS |
| AAGAAAGGATAGCCCGGACT+TGG | 0.424969 | 1_1:-69892000 | Msa0039910:CDS |
| AATGCTGGAAATTGGTTGAT+TGG | 0.426694 | 1_1:-69891932 | Msa0039910:CDS |
| GAGAGAGTGAGAAGGGAAAG+AGG | 0.428871 | 1_1:+69894303 | None:intergenic |
| AAGCCCATCATGATACTTGA+TGG | 0.430211 | 1_1:+69891886 | None:intergenic |
| CTTTGATCCATCAAGGCCTC+AGG | 0.430540 | 1_1:-69890749 | Msa0039910:CDS |
| TCTGATGGGAGGGGCAAAAT+GGG | 0.437230 | 1_1:+69894264 | None:intergenic |
| TGAAACTCTGAGTTTCTGAT+TGG | 0.437359 | 1_1:+69894210 | None:intergenic |
| CGGTAGAGACCCTGCAGGCA+TGG | 0.441184 | 1_1:-69890994 | Msa0039910:CDS |
| ATACAACACTAGACCGGAAC+AGG | 0.442459 | 1_1:+69890423 | None:intergenic |
| TATGTCTGTTCCGATTGTTT+TGG | 0.445173 | 1_1:-69893942 | Msa0039910:CDS |
| ATCTTTGAAAGCTTTATCCT+TGG | 0.450558 | 1_1:+69894094 | None:intergenic |
| GATCTTTCTTTAGGTACTTG+AGG | 0.454226 | 1_1:-69891144 | Msa0039910:intron |
| GGTATCTTACTCTTTGAGAA+TGG | 0.454494 | 1_1:+69893841 | None:intergenic |
| CACACCTTCAATGGCTTCCA+TGG | 0.454764 | 1_1:-69894344 | Msa0039910:exon |
| ATGGATACAACTGTTGTCTC+TGG | 0.459319 | 1_1:+69891107 | None:intergenic |
| ATGTTTAAGCGCTCGAGTCC+AGG | 0.465204 | 1_1:+69890906 | None:intergenic |
| CCTGATGGATTTATGTGCCC+TGG | 0.467387 | 1_1:-69890513 | Msa0039910:CDS |
| TTTCTTTAGGTACTTGAGGA+TGG | 0.469913 | 1_1:-69891140 | Msa0039910:intron |
| GAAGAAACTATAACTAATGC+TGG | 0.471140 | 1_1:-69891947 | Msa0039910:CDS |
| ACCATCCGGTTCAATCAAAC+CGG | 0.472422 | 1_1:+69894186 | None:intergenic |
| AAAGCATGGCCATTGTGGAC+AGG | 0.475521 | 1_1:+69891776 | None:intergenic |
| CAGAAACTCAGAGTTTCATC+CGG | 0.475836 | 1_1:-69894205 | Msa0039910:CDS |
| CCGTCTCCCATGCACTATGC+TGG | 0.482401 | 1_1:-69891080 | Msa0039910:CDS |
| AATTCACTTAGACTCAATGA+TGG | 0.483643 | 1_1:-69893977 | Msa0039910:CDS |
| GCATGCCACTGCACCTCAGT+TGG | 0.486147 | 1_1:+69891056 | None:intergenic |
| AGTTTAGTGCTTTCAAGCAA+TGG | 0.487220 | 1_1:-69890459 | Msa0039910:CDS |
| GGGTGGGCTACCCCACTTGG+TGG | 0.489758 | 1_1:-69894040 | Msa0039910:CDS |
| CTGATGATGTACCACTTGAT+TGG | 0.492090 | 1_1:-69891664 | Msa0039910:CDS |
| AATTGCTACGTTGACTCTGA+TGG | 0.492558 | 1_1:+69894249 | None:intergenic |
| TTCTTCAGCATAAGGCAGGC+CGG | 0.499948 | 1_1:+69891964 | None:intergenic |
| AAGTGGTACATCATCAGCTT+TGG | 0.500888 | 1_1:+69891670 | None:intergenic |
| GAAGGGTGGGCTACCCCACT+TGG | 0.502913 | 1_1:-69894043 | Msa0039910:CDS |
| AGCAGTTGTTCCCCAAGTCC+GGG | 0.505472 | 1_1:+69891988 | None:intergenic |
| TAGTTTCTTCAGCATAAGGC+AGG | 0.507019 | 1_1:+69891960 | None:intergenic |
| GCAAAGGCTAGGATCAATGC+AGG | 0.509848 | 1_1:-69891035 | Msa0039910:CDS |
| CAGCATAGTGCATGGGAGAC+GGG | 0.510140 | 1_1:+69891081 | None:intergenic |
| AACTCATCACGGAGTTCTGA+AGG | 0.511645 | 1_1:+69891845 | None:intergenic |
| TGCTCAATACTTTCTTTCCG+TGG | 0.512487 | 1_1:+69890934 | None:intergenic |
| TGGTATATAAAACTACGAAA+AGG | 0.513505 | 1_1:+69894394 | None:intergenic |
| TTCATGTGCTGAGTGAAGGG+TGG | 0.514044 | 1_1:-69894057 | Msa0039910:CDS |
| GGTTTGCAAAGGATTTGGTT+TGG | 0.515413 | 1_1:-69890196 | Msa0039910:three_prime_UTR |
| GGTAGAGACCCTGCAGGCAT+GGG | 0.515724 | 1_1:-69890993 | Msa0039910:CDS |
| TCATCAATAGCCAAAACAAT+CGG | 0.518346 | 1_1:+69893932 | None:intergenic |
| TCTTCAGCATAAGGCAGGCC+GGG | 0.518602 | 1_1:+69891965 | None:intergenic |
| TGGCATTCTTTGATCCATCA+AGG | 0.519192 | 1_1:-69890756 | Msa0039910:CDS |
| TCTTTGTAATATATTGATTG+TGG | 0.520699 | 1_1:-69890217 | Msa0039910:three_prime_UTR |
| CCAGGGCACATAAATCCATC+AGG | 0.520870 | 1_1:+69890513 | None:intergenic |
| GGTGAAATCAGTGTCTTGGC+AGG | 0.521029 | 1_1:+69890353 | None:intergenic |
| TCATGTGCTGAGTGAAGGGT+GGG | 0.527216 | 1_1:-69894056 | Msa0039910:CDS |
| CGGGATGGCCCATGCCTGCA+GGG | 0.527773 | 1_1:+69890985 | None:intergenic |
| AATTGAAATGAAGCGTTTGG+AGG | 0.528583 | 1_1:+69893996 | None:intergenic |
| GTGGATGAAGGAGGGTAGAA+GGG | 0.528868 | 1_1:+69894428 | None:intergenic |
| GGGGCTAACTTCTACATTGT+CGG | 0.529113 | 1_1:-69891014 | Msa0039910:CDS |
| ATATTGATTGTGGTTTGCAA+AGG | 0.529189 | 1_1:-69890207 | Msa0039910:three_prime_UTR |
| ACTAGCACCTTCCAGCCACC+AGG | 0.530061 | 1_1:+69890495 | None:intergenic |
| AAGCATGGCCATTGTGGACA+GGG | 0.530459 | 1_1:+69891777 | None:intergenic |
| CTCCAAGTGGATGAAGCAAA+AGG | 0.531856 | 1_1:+69891699 | None:intergenic |
| GAACCCATCAAGTATCATGA+TGG | 0.533542 | 1_1:-69891890 | Msa0039910:CDS |
| CTGATTTCACCAAGATCTCA+TGG | 0.533656 | 1_1:-69890341 | Msa0039910:three_prime_UTR |
| AGAAAGGATAGCCCGGACTT+GGG | 0.536377 | 1_1:-69891999 | Msa0039910:CDS |
| CCAGCATAGTGCATGGGAGA+CGG | 0.537239 | 1_1:+69891080 | None:intergenic |
| GGGCTATCCTTTCTTCTTTG+GGG | 0.541088 | 1_1:+69892008 | None:intergenic |
| GTATTGTTGCTAGTGGATGA+AGG | 0.541399 | 1_1:+69894416 | None:intergenic |
| ATAAGCACCCCAAAGAAGAA+AGG | 0.543122 | 1_1:-69892015 | Msa0039910:CDS |
| TGATGGGTTCTATAACCTCT+AGG | 0.543315 | 1_1:+69891903 | None:intergenic |
| AATTCATCAATTACCCTGAA+AGG | 0.548114 | 1_1:+69890879 | None:intergenic |
| TCTTGGTGAAATCAGTGTCT+TGG | 0.549542 | 1_1:+69890349 | None:intergenic |
| ACTTGGGGAACAACTGCTCC+CGG | 0.550066 | 1_1:-69891983 | Msa0039910:CDS |
| AACAAAGAAAGTCCTCCTGA+TGG | 0.550290 | 1_1:-69890528 | Msa0039910:CDS |
| AAAGTATTGAGCATGGCACC+TGG | 0.552120 | 1_1:-69890924 | Msa0039910:CDS |
| TTTGGACAAAAGGGTAGCCA+TGG | 0.552527 | 1_1:+69894327 | None:intergenic |
| TGCAGATGCGCACACTTGCT+AGG | 0.553668 | 1_1:-69890551 | Msa0039910:intron |
| AGTGGATGAAGCAAAAGGAC+TGG | 0.554010 | 1_1:+69891704 | None:intergenic |
| TATGTGCCCTGGTGGCTGGA+AGG | 0.556507 | 1_1:-69890502 | Msa0039910:CDS |
| CTACGTTGACTCTGATGGGA+GGG | 0.561987 | 1_1:+69894254 | None:intergenic |
| TCCGGTTTGATTGAACCGGA+TGG | 0.563694 | 1_1:-69894187 | Msa0039910:CDS |
| GTAGCCATGGAAGCCATTGA+AGG | 0.564236 | 1_1:+69894340 | None:intergenic |
| ATTGCTACGTTGACTCTGAT+GGG | 0.567247 | 1_1:+69894250 | None:intergenic |
| CTCTCATGAAACCACCAAGT+GGG | 0.567308 | 1_1:+69894029 | None:intergenic |
| GTGAAGCTTTATCATTGCCA+AGG | 0.567965 | 1_1:-69894111 | Msa0039910:CDS |
| GAAAGGATAGCCCGGACTTG+GGG | 0.571803 | 1_1:-69891998 | Msa0039910:CDS |
| TACGTTGACTCTGATGGGAG+GGG | 0.576534 | 1_1:+69894255 | None:intergenic |
| TGGGTTCATGTGCTGAGTGA+AGG | 0.577966 | 1_1:-69894061 | Msa0039910:CDS |
| CCAAAGAAGAAAGGATAGCC+CGG | 0.578206 | 1_1:-69892006 | Msa0039910:CDS |
| TGTTGCTAGTGGATGAAGGA+GGG | 0.580083 | 1_1:+69894420 | None:intergenic |
| ATTAAAATACAACACTAGAC+CGG | 0.582109 | 1_1:+69890417 | None:intergenic |
| ATGATGTACCACTTGATTGG+AGG | 0.582625 | 1_1:-69891661 | Msa0039910:CDS |
| CGAAAAGGTATTGTTGCTAG+TGG | 0.584709 | 1_1:+69894409 | None:intergenic |
| AACCCATCAAGTATCATGAT+GGG | 0.586308 | 1_1:-69891889 | Msa0039910:CDS |
| GTTGGTCCAGCATAGTGCAT+GGG | 0.590516 | 1_1:+69891074 | None:intergenic |
| ATTCACTTAGACTCAATGAT+GGG | 0.594320 | 1_1:-69893976 | Msa0039910:CDS |
| TCCCCTAATAAAGTTTGGGA+TGG | 0.595490 | 1_1:-69890313 | Msa0039910:three_prime_UTR |
| GGTTTGATTGAACCGGATGG+TGG | 0.596506 | 1_1:-69894184 | Msa0039910:CDS |
| AGCCCATCATGATACTTGAT+GGG | 0.597356 | 1_1:+69891887 | None:intergenic |
| TGCTGCATATGACAAGACTC+AGG | 0.597492 | 1_1:-69890785 | Msa0039910:CDS |
| GCCATCCCAAACTTTATTAG+GGG | 0.598743 | 1_1:+69890312 | None:intergenic |
| GGGTTCATGTGCTGAGTGAA+GGG | 0.599411 | 1_1:-69894060 | Msa0039910:CDS |
| GCTGGAAATTGGTTGATTGG+TGG | 0.600582 | 1_1:-69891929 | Msa0039910:CDS |
| AGTTGGTCCAGCATAGTGCA+TGG | 0.601513 | 1_1:+69891073 | None:intergenic |
| CCATATCAAGAAGCCGCTTG+CGG | 0.602478 | 1_1:+69891738 | None:intergenic |
| TGCAGTGGCATGCAAAGGCT+AGG | 0.605138 | 1_1:-69891046 | Msa0039910:CDS |
| CAAAGGCTAGGATCAATGCA+GGG | 0.607482 | 1_1:-69891034 | Msa0039910:CDS |
| TGAGGTGCAGTGGCATGCAA+AGG | 0.611774 | 1_1:-69891051 | Msa0039910:CDS |
| TTAGCAAAGCATGGCCATTG+TGG | 0.614348 | 1_1:+69891771 | None:intergenic |
| TGTCTTCATATCAGGCACAA+AGG | 0.619092 | 1_1:-69890722 | Msa0039910:intron |
| TTGTTGCTAGTGGATGAAGG+AGG | 0.621698 | 1_1:+69894419 | None:intergenic |
| TATCAGTCATTAGCAAAGCA+TGG | 0.624374 | 1_1:+69891762 | None:intergenic |
| CTGGAACGCAAACACAGCAT+CGG | 0.624640 | 1_1:+69891808 | None:intergenic |
| GAGGATGAAACAGCATGAGA+AGG | 0.625780 | 1_1:-69891642 | Msa0039910:intron |
| ATCAATATATTACAAAGAGG+TGG | 0.627385 | 1_1:+69890222 | None:intergenic |
| TGGAAAATTGGTAGAGCTTG+TGG | 0.628005 | 1_1:-69894164 | Msa0039910:CDS |
| GGTGGCACTATAACTGCAAG+AGG | 0.629772 | 1_1:+69890240 | None:intergenic |
| ACTCATCACGGAGTTCTGAA+GGG | 0.630273 | 1_1:+69891846 | None:intergenic |
| CTCCGGAACCCTGTCCACAA+TGG | 0.630690 | 1_1:-69891785 | Msa0039910:CDS |
| ACAATCAATATATTACAAAG+AGG | 0.632753 | 1_1:+69890219 | None:intergenic |
| AACTCCGTGATGAGTTCACA+AGG | 0.634078 | 1_1:-69891838 | Msa0039910:CDS |
| AGACAGAAAGACAGAAACGT+AGG | 0.634735 | 1_1:+69894539 | None:intergenic |
| CTCATCACGGAGTTCTGAAG+GGG | 0.634921 | 1_1:+69891847 | None:intergenic |
| TGCGCCTTGTGAACTCATCA+CGG | 0.635019 | 1_1:+69891834 | None:intergenic |
| TGTTTCATCCTCCAATCAAG+TGG | 0.641105 | 1_1:+69891653 | None:intergenic |
| TAATGACTGATACCCGCAAG+CGG | 0.641357 | 1_1:-69891751 | Msa0039910:CDS |
| GATGGATTTATGTGCCCTGG+TGG | 0.643053 | 1_1:-69890510 | Msa0039910:CDS |
| ATTGTCGGTAGAGACCCTGC+AGG | 0.643568 | 1_1:-69890999 | Msa0039910:CDS |
| ACTCTTTGAGAATGGCAACA+GGG | 0.643983 | 1_1:+69893849 | None:intergenic |
| TCTCATGAAACCACCAAGTG+GGG | 0.649285 | 1_1:+69894030 | None:intergenic |
| CGGAAAGAAAGTATTGAGCA+TGG | 0.652115 | 1_1:-69890931 | Msa0039910:CDS |
| CTGGACCAACTGAGGTGCAG+TGG | 0.655057 | 1_1:-69891061 | Msa0039910:CDS |
| TCTCTCATGAAACCACCAAG+TGG | 0.655442 | 1_1:+69894028 | None:intergenic |
| GGAAGCCATTGAAGGTGTGG+TGG | 0.655553 | 1_1:+69894348 | None:intergenic |
| TTGATGATGATCAGAAACAT+CGG | 0.659323 | 1_1:-69893916 | Msa0039910:CDS |
| CTAGCACCTTCCAGCCACCA+GGG | 0.661333 | 1_1:+69890496 | None:intergenic |
| GATGATCAGAAACATCGGAT+CGG | 0.661345 | 1_1:-69893911 | Msa0039910:CDS |
| CATGGAAGCCATTGAAGGTG+TGG | 0.663064 | 1_1:+69894345 | None:intergenic |
| GATCTATATGATGCTGACCA+CGG | 0.665987 | 1_1:-69890951 | Msa0039910:CDS |
| GCTACGTTGACTCTGATGGG+AGG | 0.667478 | 1_1:+69894253 | None:intergenic |
| GCTGCATATGACAAGACTCA+GGG | 0.669592 | 1_1:-69890784 | Msa0039910:CDS |
| GTTGATTGGTGGTGACCTAG+AGG | 0.677209 | 1_1:-69891918 | Msa0039910:CDS |
| AAAGGCTAGGATCAATGCAG+GGG | 0.692913 | 1_1:-69891033 | Msa0039910:CDS |
| AAAATTGGTAGAGCTTGTGG+TGG | 0.695154 | 1_1:-69894161 | Msa0039910:CDS |
| GCACTATGCTGGACCAACTG+AGG | 0.705349 | 1_1:-69891069 | Msa0039910:CDS |
| GGGCACATAAATCCATCAGG+AGG | 0.714670 | 1_1:+69890516 | None:intergenic |
| TACAAGCCATACTTACAGAG+AGG | 0.714959 | 1_1:+69890269 | None:intergenic |
| GCTTTGGTATAGCCTCCAAG+TGG | 0.715657 | 1_1:+69891686 | None:intergenic |
| GATATGAAGACAAAATCCTG+AGG | 0.718990 | 1_1:+69890733 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATGTATTATTATAAACT+AGG | + | chr1_1:69891869-69891888 | None:intergenic | 10.0% |
| !! | ATTATTCATATTACTTAAAT+AGG | - | chr1_1:69891994-69892013 | Msa0039910:CDS | 10.0% |
| !!! | AATTTATTTTTGTATTTGTT+TGG | + | chr1_1:69892248-69892267 | None:intergenic | 10.0% |
| !! | TATAATAATACTTATTAGAA+GGG | + | chr1_1:69893150-69893169 | None:intergenic | 10.0% |
| !! | ATATAATAATACTTATTAGA+AGG | + | chr1_1:69893151-69893170 | None:intergenic | 10.0% |
| !! | TAATAAGTATTATTATATAG+CGG | - | chr1_1:69893153-69893172 | Msa0039910:intron | 10.0% |
| !! | TCTCATAAAAAAAACAAAAA+TGG | + | chr1_1:69891129-69891148 | None:intergenic | 15.0% |
| !! | AATGAAAAAGAATTAAAACA+AGG | + | chr1_1:69891279-69891298 | None:intergenic | 15.0% |
| !! | TTTAGTAGGTAAATAAATTA+TGG | + | chr1_1:69893412-69893431 | None:intergenic | 15.0% |
| !!! | ACAAAAAACTTTTTAAGTAG+TGG | + | chr1_1:69890140-69890159 | None:intergenic | 20.0% |
| !!! | AAGAAAAATGAAATTCGTTT+TGG | + | chr1_1:69890278-69890297 | None:intergenic | 20.0% |
| !! | CAAAAACATGAAATTTACAT+AGG | + | chr1_1:69890933-69890952 | None:intergenic | 20.0% |
| !!! | GGAGTAACAATATTTTTATT+GGG | + | chr1_1:69891021-69891040 | None:intergenic | 20.0% |
| !!! | AATTCTTTTTCATTTTGTGT+TGG | - | chr1_1:69891285-69891304 | Msa0039910:intron | 20.0% |
| !!! | TAAGATATAAGCTTTTAAAC+AGG | + | chr1_1:69891680-69891699 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCTTAAATAGAGA+AGG | + | chr1_1:69892102-69892121 | None:intergenic | 20.0% |
| !!! | TATTTCACAATGCTTTATTA+GGG | + | chr1_1:69892173-69892192 | None:intergenic | 20.0% |
| !!! | ATATGCTATTTAGTACAAAA+TGG | - | chr1_1:69893244-69893263 | Msa0039910:intron | 20.0% |
| !!! | ATATCTTTTGATCTTTCTTT+AGG | - | chr1_1:69893496-69893515 | Msa0039910:intron | 20.0% |
| !!! | ATATAGATCTCTTTTTTCAA+CGG | + | chr1_1:69893687-69893706 | None:intergenic | 20.0% |
| !!! | TTTTAATGTATAAACCTGAT+TGG | - | chr1_1:69894248-69894267 | Msa0039910:CDS | 20.0% |
| !! | TTTAATGTATAAACCTGATT+GGG | - | chr1_1:69894249-69894268 | Msa0039910:CDS | 20.0% |
| !! | ACAATCAATATATTACAAAG+AGG | + | chr1_1:69894433-69894452 | None:intergenic | 20.0% |
| !!! | TCTTTGTAATATATTGATTG+TGG | - | chr1_1:69894432-69894451 | Msa0039910:five_prime_UTR | 20.0% |
| ! | TGGTATATAAAACTACGAAA+AGG | + | chr1_1:69890258-69890277 | None:intergenic | 25.0% |
| ! | TCAAAGAGAGATTTGAAAAA+AGG | - | chr1_1:69890516-69890535 | Msa0039910:CDS | 25.0% |
| ! | TTTCAAAGATTGATGTTGAA+TGG | - | chr1_1:69890568-69890587 | Msa0039910:intron | 25.0% |
| ! | TTCAAAGATTGATGTTGAAT+GGG | - | chr1_1:69890569-69890588 | Msa0039910:intron | 25.0% |
| !!! | GTAAATTTCATGTTTTTGTG+AGG | - | chr1_1:69890935-69890954 | Msa0039910:CDS | 25.0% |
| !!! | TTTGTTTTTTGTCTGTTCTT+AGG | - | chr1_1:69890959-69890978 | Msa0039910:CDS | 25.0% |
| !!! | TTGTTTTTTGTCTGTTCTTA+GGG | - | chr1_1:69890960-69890979 | Msa0039910:CDS | 25.0% |
| !!! | GGGAGTAACAATATTTTTAT+TGG | + | chr1_1:69891022-69891041 | None:intergenic | 25.0% |
| !! | TAGTATTGTTTTCAATATGC+AGG | - | chr1_1:69891168-69891187 | Msa0039910:intron | 25.0% |
| !! | AGTATTGTTTTCAATATGCA+GGG | - | chr1_1:69891169-69891188 | Msa0039910:intron | 25.0% |
| ! | AAACTATCTCAAAATCATCA+CGG | + | chr1_1:69891351-69891370 | None:intergenic | 25.0% |
| !!! | GCTTAGGCTTTAAAAAAATA+TGG | + | chr1_1:69891582-69891601 | None:intergenic | 25.0% |
| ! | CAATGTGATCTAAGTTTAAA+TGG | - | chr1_1:69891718-69891737 | Msa0039910:CDS | 25.0% |
| !! | TTAAGCCTATTTAGCTTAAA+AGG | + | chr1_1:69892066-69892085 | None:intergenic | 25.0% |
| ! | CTCTATTTAAGAAAAAAGTC+TGG | - | chr1_1:69892103-69892122 | Msa0039910:intron | 25.0% |
| !! | CTATTTCACAATGCTTTATT+AGG | + | chr1_1:69892174-69892193 | None:intergenic | 25.0% |
| !! | TATGTATCTAGAGATTTTGT+GGG | + | chr1_1:69892215-69892234 | None:intergenic | 25.0% |
| ! | ACAAAATCTCTAGATACATA+GGG | - | chr1_1:69892215-69892234 | Msa0039910:intron | 25.0% |
| ! | TTAAAATTCTTGTTGCGAAT+AGG | - | chr1_1:69892367-69892386 | Msa0039910:intron | 25.0% |
| ! | TCGACAAAATACAATATTCA+GGG | + | chr1_1:69892417-69892436 | None:intergenic | 25.0% |
| ! | AGAGGAAAAATATTAGTCAT+GGG | + | chr1_1:69892592-69892611 | None:intergenic | 25.0% |
| ! | AACACAAAAAGAAAAGAAAG+TGG | + | chr1_1:69893085-69893104 | None:intergenic | 25.0% |
| !!! | CTCTAACTGATTTTTTTAGT+AGG | + | chr1_1:69893426-69893445 | None:intergenic | 25.0% |
| ! | AGCAACTTAAACCATATTAT+GGG | + | chr1_1:69893453-69893472 | None:intergenic | 25.0% |
| ! | AAGCAACTTAAACCATATTA+TGG | + | chr1_1:69893454-69893473 | None:intergenic | 25.0% |
| !!! | TATGGTTTAAGTTGCTTTTT+TGG | - | chr1_1:69893457-69893476 | Msa0039910:intron | 25.0% |
| !!! | TATAGATCTCTTTTTTCAAC+GGG | + | chr1_1:69893686-69893705 | None:intergenic | 25.0% |
| ! | TTCTCACTAATAAATACATG+AGG | - | chr1_1:69893797-69893816 | Msa0039910:intron | 25.0% |
| ! | GATTATTTCCATTCATTTGT+AGG | - | chr1_1:69893840-69893859 | Msa0039910:intron | 25.0% |
| ! | TGTTGTCTCTTAATTAACAA+AGG | - | chr1_1:69894063-69894082 | Msa0039910:CDS | 25.0% |
| ! | ATTAAAATACAACACTAGAC+CGG | + | chr1_1:69894235-69894254 | None:intergenic | 25.0% |
| ! | ATCAATATATTACAAAGAGG+TGG | + | chr1_1:69894430-69894449 | None:intergenic | 25.0% |
| ! | GAGTTCAAGATTGAATTAAT+AGG | + | chr1_1:69894535-69894554 | None:intergenic | 25.0% |
| ! | AAAATGGGTATCAAACGTTT+TGG | + | chr1_1:69890373-69890392 | None:intergenic | 30.0% |
| ! | ATCTTTGAAAGCTTTATCCT+TGG | + | chr1_1:69890558-69890577 | None:intergenic | 30.0% |
| AATTCACTTAGACTCAATGA+TGG | - | chr1_1:69890672-69890691 | Msa0039910:intron | 30.0% | |
| ATTCACTTAGACTCAATGAT+GGG | - | chr1_1:69890673-69890692 | Msa0039910:intron | 30.0% | |
| TCATCAATAGCCAAAACAAT+CGG | + | chr1_1:69890720-69890739 | None:intergenic | 30.0% | |
| !! | TTGATGATGATCAGAAACAT+CGG | - | chr1_1:69890733-69890752 | Msa0039910:CDS | 30.0% |
| !! | AGTTGCTCTTTTTGATTCTA+AGG | - | chr1_1:69890773-69890792 | Msa0039910:CDS | 30.0% |
| !! | GTTGCTCTTTTTGATTCTAA+GGG | - | chr1_1:69890774-69890793 | Msa0039910:CDS | 30.0% |
| ACATGAACAAGAGAAGAAAA+AGG | + | chr1_1:69890832-69890851 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTGTCTGTTCTTAG+GGG | - | chr1_1:69890961-69890980 | Msa0039910:CDS | 30.0% |
| GGAATATAATCTGGTAATCT+AGG | - | chr1_1:69890985-69891004 | Msa0039910:CDS | 30.0% | |
| TGTTGAGGATTAATCAAGTT+GGG | + | chr1_1:69891042-69891061 | None:intergenic | 30.0% | |
| TTGTTGAGGATTAATCAAGT+TGG | + | chr1_1:69891043-69891062 | None:intergenic | 30.0% | |
| AGCCAATCATAGAGTTTAAT+TGG | - | chr1_1:69891207-69891226 | Msa0039910:intron | 30.0% | |
| GACCAATTAAACTCTATGAT+TGG | + | chr1_1:69891212-69891231 | None:intergenic | 30.0% | |
| TTGTGTTGGAATGTTATGAT+TGG | - | chr1_1:69891299-69891318 | Msa0039910:intron | 30.0% | |
| CATGTTCTATTTACCAATGT+TGG | - | chr1_1:69891451-69891470 | Msa0039910:intron | 30.0% | |
| !! | AGGCTTTAAAAAAATATGGC+AGG | + | chr1_1:69891578-69891597 | None:intergenic | 30.0% |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | - | chr1_1:69891583-69891602 | Msa0039910:intron | 30.0% |
| ! | ATAATCAACACGAGGTTTTA+GGG | - | chr1_1:69891782-69891801 | Msa0039910:CDS | 30.0% |
| ATAGGCTTAAAAAAAAGCCT+AGG | - | chr1_1:69892076-69892095 | Msa0039910:intron | 30.0% | |
| AGCATTGTGAAATAGACTAT+AGG | - | chr1_1:69892179-69892198 | Msa0039910:intron | 30.0% | |
| ! | CTATGTATCTAGAGATTTTG+TGG | + | chr1_1:69892216-69892235 | None:intergenic | 30.0% |
| CACAAAATCTCTAGATACAT+AGG | - | chr1_1:69892214-69892233 | Msa0039910:intron | 30.0% | |
| TCTTGAACTTATCTTGAACA+AGG | + | chr1_1:69892289-69892308 | None:intergenic | 30.0% | |
| GTCGACAAAATACAATATTC+AGG | + | chr1_1:69892418-69892437 | None:intergenic | 30.0% | |
| TATTAGTCATGGGAAACAAA+TGG | + | chr1_1:69892582-69892601 | None:intergenic | 30.0% | |
| CAGAGGAAAAATATTAGTCA+TGG | + | chr1_1:69892593-69892612 | None:intergenic | 30.0% | |
| ! | CATGACTAATATTTTTCCTC+TGG | - | chr1_1:69892591-69892610 | Msa0039910:intron | 30.0% |
| GTTATAGTTTCTTCAGCATA+AGG | + | chr1_1:69892696-69892715 | None:intergenic | 30.0% | |
| GAAGAAACTATAACTAATGC+TGG | - | chr1_1:69892702-69892721 | Msa0039910:intron | 30.0% | |
| CTATAACTAATGCTGGAAAT+TGG | - | chr1_1:69892709-69892728 | Msa0039910:intron | 30.0% | |
| TGTGGAAAAGCAAGAAATTA+AGG | + | chr1_1:69893116-69893135 | None:intergenic | 30.0% | |
| ATTATTATATAGCGGCGAAT+CGG | - | chr1_1:69893161-69893180 | Msa0039910:intron | 30.0% | |
| GCAACTTAAACCATATTATG+GGG | + | chr1_1:69893452-69893471 | None:intergenic | 30.0% | |
| !!! | GTTTAAGTTGCTTTTTTGGA+TGG | - | chr1_1:69893461-69893480 | Msa0039910:intron | 30.0% |
| CTTAAACATTCTTCCTTTCA+GGG | - | chr1_1:69893757-69893776 | Msa0039910:intron | 30.0% | |
| AATTCATCAATTACCCTGAA+AGG | + | chr1_1:69893773-69893792 | None:intergenic | 30.0% | |
| TAAATACATGAGGTTCACTT+AGG | - | chr1_1:69893807-69893826 | Msa0039910:intron | 30.0% | |
| ! | GGTATGTTATTCTGTGATTT+TGG | - | chr1_1:69893948-69893967 | Msa0039910:CDS | 30.0% |
| !!! | TTCTGTGATTTTGGAACATA+CGG | - | chr1_1:69893957-69893976 | Msa0039910:CDS | 30.0% |
| CTAATCCCCTAATAAAGTTT+GGG | - | chr1_1:69894332-69894351 | Msa0039910:CDS | 30.0% | |
| ! | ATATTGATTGTGGTTTGCAA+AGG | - | chr1_1:69894442-69894461 | Msa0039910:five_prime_UTR | 30.0% |
| !!! | GAAAGAGGTTTTGGACAAAA+GGG | + | chr1_1:69890334-69890353 | None:intergenic | 35.0% |
| TGAAACTCTGAGTTTCTGAT+TGG | + | chr1_1:69890442-69890461 | None:intergenic | 35.0% | |
| ! | AATTGAAATGAAGCGTTTGG+AGG | + | chr1_1:69890656-69890675 | None:intergenic | 35.0% |
| ! | GTGAATTGAAATGAAGCGTT+TGG | + | chr1_1:69890659-69890678 | None:intergenic | 35.0% |
| ! | TATGTCTGTTCCGATTGTTT+TGG | - | chr1_1:69890707-69890726 | Msa0039910:intron | 35.0% |
| ! | GGTATCTTACTCTTTGAGAA+TGG | + | chr1_1:69890811-69890830 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTCTGTTCTTAGG+GGG | - | chr1_1:69890962-69890981 | Msa0039910:CDS | 35.0% |
| !!! | TTTTTTGTCTGTTCTTAGGG+GGG | - | chr1_1:69890963-69890982 | Msa0039910:CDS | 35.0% |
| ! | ACTCTATGATTGGCTAAAGA+AGG | + | chr1_1:69891202-69891221 | None:intergenic | 35.0% |
| ACAAGGACACAAAACATGTA+CGG | + | chr1_1:69891262-69891281 | None:intergenic | 35.0% | |
| GTTGGAATGTTATGATTGGT+TGG | - | chr1_1:69891303-69891322 | Msa0039910:intron | 35.0% | |
| ATCATCAGAACAACCAACAT+TGG | + | chr1_1:69891467-69891486 | None:intergenic | 35.0% | |
| ! | ATGTTGGTTGTTCTGATGAT+TGG | - | chr1_1:69891467-69891486 | Msa0039910:intron | 35.0% |
| AATACCTCGTCATAAAGCAT+AGG | - | chr1_1:69891504-69891523 | Msa0039910:intron | 35.0% | |
| ATACCTCGTCATAAAGCATA+GGG | - | chr1_1:69891505-69891524 | Msa0039910:intron | 35.0% | |
| TTAAAAAAATATGGCAGGCC+AGG | + | chr1_1:69891573-69891592 | None:intergenic | 35.0% | |
| !! | CTCTTTTGATAATCAACACG+AGG | - | chr1_1:69891774-69891793 | Msa0039910:CDS | 35.0% |
| ! | GATAATCAACACGAGGTTTT+AGG | - | chr1_1:69891781-69891800 | Msa0039910:CDS | 35.0% |
| CTTAAATAGGTCAGCCTAAT+AGG | - | chr1_1:69892007-69892026 | Msa0039910:CDS | 35.0% | |
| AAAAGCCTCTTAAGCCTATT+AGG | + | chr1_1:69892024-69892043 | None:intergenic | 35.0% | |
| !! | TCTGGCCTTTTAAGCTAAAT+AGG | - | chr1_1:69892058-69892077 | Msa0039910:intron | 35.0% |
| TTCTTAAATAGAGAAGGCCT+AGG | + | chr1_1:69892096-69892115 | None:intergenic | 35.0% | |
| TTTAAGAAAAAAGTCTGGCC+TGG | - | chr1_1:69892108-69892127 | Msa0039910:intron | 35.0% | |
| ! | CACAATGCTTTATTAGGGAT+GGG | + | chr1_1:69892168-69892187 | None:intergenic | 35.0% |
| ! | TCACAATGCTTTATTAGGGA+TGG | + | chr1_1:69892169-69892188 | None:intergenic | 35.0% |
| AATGCTGGAAATTGGTTGAT+TGG | - | chr1_1:69892717-69892736 | Msa0039910:intron | 35.0% | |
| AACCCATCAAGTATCATGAT+GGG | - | chr1_1:69892760-69892779 | Msa0039910:intron | 35.0% | |
| TATCAGTCATTAGCAAAGCA+TGG | + | chr1_1:69892890-69892909 | None:intergenic | 35.0% | |
| AGAAGCAATGTTGTCAATCA+CGG | + | chr1_1:69893345-69893364 | None:intergenic | 35.0% | |
| GATCTTTCTTTAGGTACTTG+AGG | - | chr1_1:69893505-69893524 | Msa0039910:intron | 35.0% | |
| TTTCTTTAGGTACTTGAGGA+TGG | - | chr1_1:69893509-69893528 | Msa0039910:intron | 35.0% | |
| GCTTAAACATTCTTCCTTTC+AGG | - | chr1_1:69893756-69893775 | Msa0039910:intron | 35.0% | |
| GATATGAAGACAAAATCCTG+AGG | + | chr1_1:69893919-69893938 | None:intergenic | 35.0% | |
| ! | CAGGATTTTGTCTTCATATC+AGG | - | chr1_1:69893919-69893938 | Msa0039910:CDS | 35.0% |
| AGTTTAGTGCTTTCAAGCAA+TGG | - | chr1_1:69894190-69894209 | Msa0039910:CDS | 35.0% | |
| ACTTAAAGTTTCTCCCAATC+AGG | + | chr1_1:69894265-69894284 | None:intergenic | 35.0% | |
| CCAAACTTTATTAGGGGATT+AGG | + | chr1_1:69894334-69894353 | None:intergenic | 35.0% | |
| CCTAATCCCCTAATAAAGTT+TGG | - | chr1_1:69894331-69894350 | Msa0039910:CDS | 35.0% | |
| AGCCATCCCAAACTTTATTA+GGG | + | chr1_1:69894341-69894360 | None:intergenic | 35.0% | |
| ! | ATTGTGGTTTGCAAAGGATT+TGG | - | chr1_1:69894448-69894467 | Msa0039910:five_prime_UTR | 35.0% |
| AGACAGAAAGACAGAAACGT+AGG | + | chr1_1:69890113-69890132 | None:intergenic | 40.0% | |
| ! | GTATTGTTGCTAGTGGATGA+AGG | + | chr1_1:69890236-69890255 | None:intergenic | 40.0% |
| !! | CGAAAAGGTATTGTTGCTAG+TGG | + | chr1_1:69890243-69890262 | None:intergenic | 40.0% |
| !!! | GGAAAGAGGTTTTGGACAAA+AGG | + | chr1_1:69890335-69890354 | None:intergenic | 40.0% |
| !! | TTTTGGAGAGAGAGTGAGAA+GGG | + | chr1_1:69890356-69890375 | None:intergenic | 40.0% |
| !! | ATTGCTACGTTGACTCTGAT+GGG | + | chr1_1:69890402-69890421 | None:intergenic | 40.0% |
| !! | AATTGCTACGTTGACTCTGA+TGG | + | chr1_1:69890403-69890422 | None:intergenic | 40.0% |
| ATCAGAGTCAACGTAGCAAT+TGG | - | chr1_1:69890402-69890421 | Msa0039910:three_prime_UTR | 40.0% | |
| ! | TCTGAGTTTCTGATTGGTTC+TGG | + | chr1_1:69890436-69890455 | None:intergenic | 40.0% |
| CAGAAACTCAGAGTTTCATC+CGG | - | chr1_1:69890444-69890463 | Msa0039910:CDS | 40.0% | |
| ! | TTCATCCGGTTTGATTGAAC+CGG | - | chr1_1:69890458-69890477 | Msa0039910:CDS | 40.0% |
| ! | TCTACCAATTTTCCACCATC+CGG | + | chr1_1:69890480-69890499 | None:intergenic | 40.0% |
| TGGAAAATTGGTAGAGCTTG+TGG | - | chr1_1:69890485-69890504 | Msa0039910:CDS | 40.0% | |
| AAAATTGGTAGAGCTTGTGG+TGG | - | chr1_1:69890488-69890507 | Msa0039910:CDS | 40.0% | |
| ! | GTGAAGCTTTATCATTGCCA+AGG | - | chr1_1:69890538-69890557 | Msa0039910:CDS | 40.0% |
| GATGATCAGAAACATCGGAT+CGG | - | chr1_1:69890738-69890757 | Msa0039910:CDS | 40.0% | |
| ! | ACTCTTTGAGAATGGCAACA+GGG | + | chr1_1:69890803-69890822 | None:intergenic | 40.0% |
| ! | TACTCTTTGAGAATGGCAAC+AGG | + | chr1_1:69890804-69890823 | None:intergenic | 40.0% |
| ! | TTTTTGTCTGTTCTTAGGGG+GGG | - | chr1_1:69890964-69890983 | Msa0039910:CDS | 40.0% |
| GAGGCAAACAATGACAATAG+AGG | + | chr1_1:69891375-69891394 | None:intergenic | 40.0% | |
| GGTTGTTCTGATGATTGGTA+AGG | - | chr1_1:69891472-69891491 | Msa0039910:intron | 40.0% | |
| TCGTCATAAAGCATAGGGAT+GGG | - | chr1_1:69891510-69891529 | Msa0039910:intron | 40.0% | |
| CTAAAAAGTAGGCCTATGAC+AGG | + | chr1_1:69891616-69891635 | None:intergenic | 40.0% | |
| !!! | CTGTCATAGGCCTACTTTTT+AGG | - | chr1_1:69891614-69891633 | Msa0039910:intron | 40.0% |
| ! | AAGCTTTTAAACAGGCTAGC+AGG | + | chr1_1:69891672-69891691 | None:intergenic | 40.0% |
| ! | GCTTTATTAGGGATGGGAAT+AGG | + | chr1_1:69892162-69892181 | None:intergenic | 40.0% |
| TTCGATACTGAAATAGCCAG+AGG | + | chr1_1:69892610-69892629 | None:intergenic | 40.0% | |
| ATAAGCACCCCAAAGAAGAA+AGG | - | chr1_1:69892634-69892653 | Msa0039910:intron | 40.0% | |
| TAGTTTCTTCAGCATAAGGC+AGG | + | chr1_1:69892692-69892711 | None:intergenic | 40.0% | |
| !! | TGATGGGTTCTATAACCTCT+AGG | + | chr1_1:69892749-69892768 | None:intergenic | 40.0% |
| GAACCCATCAAGTATCATGA+TGG | - | chr1_1:69892759-69892778 | Msa0039910:intron | 40.0% | |
| AGCCCATCATGATACTTGAT+GGG | + | chr1_1:69892765-69892784 | None:intergenic | 40.0% | |
| AAGCCCATCATGATACTTGA+TGG | + | chr1_1:69892766-69892785 | None:intergenic | 40.0% | |
| AAGTGGTACATCATCAGCTT+TGG | + | chr1_1:69892982-69893001 | None:intergenic | 40.0% | |
| ! | CTGATGATGTACCACTTGAT+TGG | - | chr1_1:69892985-69893004 | Msa0039910:intron | 40.0% |
| ATGATGTACCACTTGATTGG+AGG | - | chr1_1:69892988-69893007 | Msa0039910:intron | 40.0% | |
| TGTTTCATCCTCCAATCAAG+TGG | + | chr1_1:69892999-69893018 | None:intergenic | 40.0% | |
| AGAGTCTCATTGTTGAAGCT+AGG | - | chr1_1:69893059-69893078 | Msa0039910:intron | 40.0% | |
| ! | GTTTTACCATATCCCAACTG+TGG | - | chr1_1:69893375-69893394 | Msa0039910:intron | 40.0% |
| GTTCTTAGTCAACCACAGTT+GGG | + | chr1_1:69893390-69893409 | None:intergenic | 40.0% | |
| GTTAGAGCTTCCCCATAATA+TGG | - | chr1_1:69893439-69893458 | Msa0039910:intron | 40.0% | |
| ATGGATACAACTGTTGTCTC+TGG | + | chr1_1:69893545-69893564 | None:intergenic | 40.0% | |
| !!! | GATCTCTTTTTTCAACGGGA+TGG | + | chr1_1:69893682-69893701 | None:intergenic | 40.0% |
| GATCTATATGATGCTGACCA+CGG | - | chr1_1:69893698-69893717 | Msa0039910:intron | 40.0% | |
| TGCTCAATACTTTCTTTCCG+TGG | + | chr1_1:69893718-69893737 | None:intergenic | 40.0% | |
| !! | CGGAAAGAAAGTATTGAGCA+TGG | - | chr1_1:69893718-69893737 | Msa0039910:intron | 40.0% |
| TGCAGCAACCTACAAATGAA+TGG | + | chr1_1:69893851-69893870 | None:intergenic | 40.0% | |
| TGACAAGACTCAGGGTAAAA+TGG | - | chr1_1:69893873-69893892 | Msa0039910:CDS | 40.0% | |
| TGGCATTCTTTGATCCATCA+AGG | - | chr1_1:69893893-69893912 | Msa0039910:CDS | 40.0% | |
| TGTCTTCATATCAGGCACAA+AGG | - | chr1_1:69893927-69893946 | Msa0039910:CDS | 40.0% | |
| AACAAAGAAAGTCCTCCTGA+TGG | - | chr1_1:69894121-69894140 | Msa0039910:CDS | 40.0% | |
| TTCAAGCAATGGCAAAGTTC+CGG | - | chr1_1:69894201-69894220 | Msa0039910:CDS | 40.0% | |
| TCTTGGTGAAATCAGTGTCT+TGG | + | chr1_1:69894303-69894322 | None:intergenic | 40.0% | |
| CTGATTTCACCAAGATCTCA+TGG | - | chr1_1:69894308-69894327 | Msa0039910:CDS | 40.0% | |
| TCCCCTAATAAAGTTTGGGA+TGG | - | chr1_1:69894336-69894355 | Msa0039910:CDS | 40.0% | |
| GCCATCCCAAACTTTATTAG+GGG | + | chr1_1:69894340-69894359 | None:intergenic | 40.0% | |
| GAGCCATCCCAAACTTTATT+AGG | + | chr1_1:69894342-69894361 | None:intergenic | 40.0% | |
| ACATTGCCTCTCTGTAAGTA+TGG | - | chr1_1:69894374-69894393 | Msa0039910:five_prime_UTR | 40.0% | |
| TACAAGCCATACTTACAGAG+AGG | + | chr1_1:69894383-69894402 | None:intergenic | 40.0% | |
| ! | GGTTTGCAAAGGATTTGGTT+TGG | - | chr1_1:69894453-69894472 | Msa0039910:five_prime_UTR | 40.0% |
| ! | TGTTGCTAGTGGATGAAGGA+GGG | + | chr1_1:69890232-69890251 | None:intergenic | 45.0% |
| ! | TTGTTGCTAGTGGATGAAGG+AGG | + | chr1_1:69890233-69890252 | None:intergenic | 45.0% |
| TTTGGACAAAAGGGTAGCCA+TGG | + | chr1_1:69890325-69890344 | None:intergenic | 45.0% | |
| ! | GTGAGAAGGGAAAGAGGTTT+TGG | + | chr1_1:69890343-69890362 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGAGAGAGTGAGA+AGG | + | chr1_1:69890357-69890376 | None:intergenic | 45.0% |
| ACCATCCGGTTCAATCAAAC+CGG | + | chr1_1:69890466-69890485 | None:intergenic | 45.0% | |
| !! | TGAACCGGATGGTGGAAAAT+TGG | - | chr1_1:69890473-69890492 | Msa0039910:CDS | 45.0% |
| TCTCATGAAACCACCAAGTG+GGG | + | chr1_1:69890622-69890641 | None:intergenic | 45.0% | |
| CTCTCATGAAACCACCAAGT+GGG | + | chr1_1:69890623-69890642 | None:intergenic | 45.0% | |
| TCTCTCATGAAACCACCAAG+TGG | + | chr1_1:69890624-69890643 | None:intergenic | 45.0% | |
| CTTAGGGGGGGAATATAATC+TGG | - | chr1_1:69890976-69890995 | Msa0039910:CDS | 45.0% | |
| !! | TGGTTTGGCTCAACTTGTTG+AGG | + | chr1_1:69891057-69891076 | None:intergenic | 45.0% |
| ! | AACAAGTTGAGCCAAACCAC+CGG | - | chr1_1:69891058-69891077 | Msa0039910:CDS | 45.0% |
| CATCCCTATGCTTTATGACG+AGG | + | chr1_1:69891511-69891530 | None:intergenic | 45.0% | |
| CTCGTCATAAAGCATAGGGA+TGG | - | chr1_1:69891509-69891528 | Msa0039910:intron | 45.0% | |
| CATAGGGATGGGAATAGACT+AGG | - | chr1_1:69891521-69891540 | Msa0039910:intron | 45.0% | |
| CAGGCTCATGCCTAAAAAGT+AGG | + | chr1_1:69891627-69891646 | None:intergenic | 45.0% | |
| !!! | CTACTTTTTAGGCATGAGCC+TGG | - | chr1_1:69891625-69891644 | Msa0039910:intron | 45.0% |
| GTCAGCCTAATAGGCTTAAG+AGG | - | chr1_1:69892016-69892035 | Msa0039910:CDS | 45.0% | |
| !! | GGCTTAAGAGGCTTTTTGAG+AGG | - | chr1_1:69892028-69892047 | Msa0039910:CDS | 45.0% |
| GGGCTATCCTTTCTTCTTTG+GGG | + | chr1_1:69892644-69892663 | None:intergenic | 45.0% | |
| CGGGCTATCCTTTCTTCTTT+GGG | + | chr1_1:69892645-69892664 | None:intergenic | 45.0% | |
| CCAAAGAAGAAAGGATAGCC+CGG | - | chr1_1:69892643-69892662 | Msa0039910:intron | 45.0% | |
| GCTGGAAATTGGTTGATTGG+TGG | - | chr1_1:69892720-69892739 | Msa0039910:intron | 45.0% | |
| !! | ACTCATCACGGAGTTCTGAA+GGG | + | chr1_1:69892806-69892825 | None:intergenic | 45.0% |
| ! | AACTCATCACGGAGTTCTGA+AGG | + | chr1_1:69892807-69892826 | None:intergenic | 45.0% |
| AACTCCGTGATGAGTTCACA+AGG | - | chr1_1:69892811-69892830 | Msa0039910:intron | 45.0% | |
| TTAGCAAAGCATGGCCATTG+TGG | + | chr1_1:69892881-69892900 | None:intergenic | 45.0% | |
| TAATGACTGATACCCGCAAG+CGG | - | chr1_1:69892898-69892917 | Msa0039910:intron | 45.0% | |
| AGTGGATGAAGCAAAAGGAC+TGG | + | chr1_1:69892948-69892967 | None:intergenic | 45.0% | |
| ! | GTCCTTTTGCTTCATCCACT+TGG | - | chr1_1:69892948-69892967 | Msa0039910:intron | 45.0% |
| CTCCAAGTGGATGAAGCAAA+AGG | + | chr1_1:69892953-69892972 | None:intergenic | 45.0% | |
| ! | CTTTTGCTTCATCCACTTGG+AGG | - | chr1_1:69892951-69892970 | Msa0039910:intron | 45.0% |
| GAGGATGAAACAGCATGAGA+AGG | - | chr1_1:69893007-69893026 | Msa0039910:intron | 45.0% | |
| AGAAGGGAAACATGCATGTG+TGG | + | chr1_1:69893134-69893153 | None:intergenic | 45.0% | |
| AGTCAACCACAGTTGGGATA+TGG | + | chr1_1:69893384-69893403 | None:intergenic | 45.0% | |
| GGTTCTTAGTCAACCACAGT+TGG | + | chr1_1:69893391-69893410 | None:intergenic | 45.0% | |
| CAAAGGCTAGGATCAATGCA+GGG | - | chr1_1:69893615-69893634 | Msa0039910:intron | 45.0% | |
| AAAGGCTAGGATCAATGCAG+GGG | - | chr1_1:69893616-69893635 | Msa0039910:intron | 45.0% | |
| GGGGCTAACTTCTACATTGT+CGG | - | chr1_1:69893635-69893654 | Msa0039910:intron | 45.0% | |
| !! | AAAGTATTGAGCATGGCACC+TGG | - | chr1_1:69893725-69893744 | Msa0039910:intron | 45.0% |
| TGCTGCATATGACAAGACTC+AGG | - | chr1_1:69893864-69893883 | Msa0039910:CDS | 45.0% | |
| GCTGCATATGACAAGACTCA+GGG | - | chr1_1:69893865-69893884 | Msa0039910:CDS | 45.0% | |
| ACAAAATCCTGAGGCCTTGA+TGG | + | chr1_1:69893910-69893929 | None:intergenic | 45.0% | |
| ATACAACACTAGACCGGAAC+AGG | + | chr1_1:69894229-69894248 | None:intergenic | 45.0% | |
| !! | TAAAAAAAAAAAAAAAAAAG+AGG | + | chr1_1:69891394-69891413 | None:intergenic | 5.0% |
| GTGGATGAAGGAGGGTAGAA+GGG | + | chr1_1:69890224-69890243 | None:intergenic | 50.0% | |
| AGTGGATGAAGGAGGGTAGA+AGG | + | chr1_1:69890225-69890244 | None:intergenic | 50.0% | |
| TTCAGCCACCACACCTTCAA+TGG | - | chr1_1:69890296-69890315 | Msa0039910:three_prime_UTR | 50.0% | |
| CATGGAAGCCATTGAAGGTG+TGG | + | chr1_1:69890307-69890326 | None:intergenic | 50.0% | |
| CACACCTTCAATGGCTTCCA+TGG | - | chr1_1:69890305-69890324 | Msa0039910:three_prime_UTR | 50.0% | |
| GTAGCCATGGAAGCCATTGA+AGG | + | chr1_1:69890312-69890331 | None:intergenic | 50.0% | |
| GAGAGAGTGAGAAGGGAAAG+AGG | + | chr1_1:69890349-69890368 | None:intergenic | 50.0% | |
| TCTGATGGGAGGGGCAAAAT+GGG | + | chr1_1:69890388-69890407 | None:intergenic | 50.0% | |
| !! | TACGTTGACTCTGATGGGAG+GGG | + | chr1_1:69890397-69890416 | None:intergenic | 50.0% |
| !! | CTACGTTGACTCTGATGGGA+GGG | + | chr1_1:69890398-69890417 | None:intergenic | 50.0% |
| ! | TCCGGTTTGATTGAACCGGA+TGG | - | chr1_1:69890462-69890481 | Msa0039910:CDS | 50.0% |
| GGTTTGATTGAACCGGATGG+TGG | - | chr1_1:69890465-69890484 | Msa0039910:CDS | 50.0% | |
| TGGGTTCATGTGCTGAGTGA+AGG | - | chr1_1:69890588-69890607 | Msa0039910:intron | 50.0% | |
| GGGTTCATGTGCTGAGTGAA+GGG | - | chr1_1:69890589-69890608 | Msa0039910:intron | 50.0% | |
| TTCATGTGCTGAGTGAAGGG+TGG | - | chr1_1:69890592-69890611 | Msa0039910:intron | 50.0% | |
| TCATGTGCTGAGTGAAGGGT+GGG | - | chr1_1:69890593-69890612 | Msa0039910:intron | 50.0% | |
| ! | ACAAGTTGAGCCAAACCACC+GGG | - | chr1_1:69891059-69891078 | Msa0039910:CDS | 50.0% |
| AAATATGGCAGGCCAGGCTT+AGG | + | chr1_1:69891567-69891586 | None:intergenic | 50.0% | |
| TATCAGGCTTTCAGAAGGCC+AGG | + | chr1_1:69891646-69891665 | None:intergenic | 50.0% | |
| ! | GGCCTTCTGAAAGCCTGATA+TGG | - | chr1_1:69891646-69891665 | Msa0039910:CDS | 50.0% |
| GGCCATATCAGGCTTTCAGA+AGG | + | chr1_1:69891651-69891670 | None:intergenic | 50.0% | |
| !! | TTTTTGAGAGGCCTGTGGTC+TGG | - | chr1_1:69892040-69892059 | Msa0039910:intron | 50.0% |
| AGCTTAAAAGGCCAGACCAC+AGG | + | chr1_1:69892054-69892073 | None:intergenic | 50.0% | |
| ATTAGGGATGGGAATAGGCC+AGG | + | chr1_1:69892157-69892176 | None:intergenic | 50.0% | |
| CCGGGCTATCCTTTCTTCTT+TGG | + | chr1_1:69892646-69892665 | None:intergenic | 50.0% | |
| AAGAAAGGATAGCCCGGACT+TGG | - | chr1_1:69892649-69892668 | Msa0039910:intron | 50.0% | |
| AGAAAGGATAGCCCGGACTT+GGG | - | chr1_1:69892650-69892669 | Msa0039910:intron | 50.0% | |
| TTCTTCAGCATAAGGCAGGC+CGG | + | chr1_1:69892688-69892707 | None:intergenic | 50.0% | |
| !! | GTTGATTGGTGGTGACCTAG+AGG | - | chr1_1:69892731-69892750 | Msa0039910:intron | 50.0% |
| !! | CTCATCACGGAGTTCTGAAG+GGG | + | chr1_1:69892805-69892824 | None:intergenic | 50.0% |
| TGCGCCTTGTGAACTCATCA+CGG | + | chr1_1:69892818-69892837 | None:intergenic | 50.0% | |
| CTGGAACGCAAACACAGCAT+CGG | + | chr1_1:69892844-69892863 | None:intergenic | 50.0% | |
| AAGCATGGCCATTGTGGACA+GGG | + | chr1_1:69892875-69892894 | None:intergenic | 50.0% | |
| AAAGCATGGCCATTGTGGAC+AGG | + | chr1_1:69892876-69892895 | None:intergenic | 50.0% | |
| CATATCAAGAAGCCGCTTGC+GGG | + | chr1_1:69892913-69892932 | None:intergenic | 50.0% | |
| CCATATCAAGAAGCCGCTTG+CGG | + | chr1_1:69892914-69892933 | None:intergenic | 50.0% | |
| CGCAAGCGGCTTCTTGATAT+GGG | - | chr1_1:69892912-69892931 | Msa0039910:intron | 50.0% | |
| GCTTTGGTATAGCCTCCAAG+TGG | + | chr1_1:69892966-69892985 | None:intergenic | 50.0% | |
| GTTGGTCCAGCATAGTGCAT+GGG | + | chr1_1:69893578-69893597 | None:intergenic | 50.0% | |
| AGTTGGTCCAGCATAGTGCA+TGG | + | chr1_1:69893579-69893598 | None:intergenic | 50.0% | |
| GCAAAGGCTAGGATCAATGC+AGG | - | chr1_1:69893614-69893633 | Msa0039910:intron | 50.0% | |
| ATGTTTAAGCGCTCGAGTCC+AGG | + | chr1_1:69893746-69893765 | None:intergenic | 50.0% | |
| CTTTGATCCATCAAGGCCTC+AGG | - | chr1_1:69893900-69893919 | Msa0039910:CDS | 50.0% | |
| GTCAGCATCAGTGTCATGTC+TGG | + | chr1_1:69894021-69894040 | None:intergenic | 50.0% | |
| GGGCACATAAATCCATCAGG+AGG | + | chr1_1:69894136-69894155 | None:intergenic | 50.0% | |
| CCAGGGCACATAAATCCATC+AGG | + | chr1_1:69894139-69894158 | None:intergenic | 50.0% | |
| !! | CCTGATGGATTTATGTGCCC+TGG | - | chr1_1:69894136-69894155 | Msa0039910:CDS | 50.0% |
| ! | GATGGATTTATGTGCCCTGG+TGG | - | chr1_1:69894139-69894158 | Msa0039910:CDS | 50.0% |
| CAAAGTTCCGGAACCTGTTC+CGG | - | chr1_1:69894213-69894232 | Msa0039910:CDS | 50.0% | |
| GGTGAAATCAGTGTCTTGGC+AGG | + | chr1_1:69894299-69894318 | None:intergenic | 50.0% | |
| GGGATTAGGCCATGAGATCT+TGG | + | chr1_1:69894320-69894339 | None:intergenic | 50.0% | |
| GGTGGCACTATAACTGCAAG+AGG | + | chr1_1:69894412-69894431 | None:intergenic | 50.0% | |
| ! | GGAAGCCATTGAAGGTGTGG+TGG | + | chr1_1:69890304-69890323 | None:intergenic | 55.0% |
| CTCTGATGGGAGGGGCAAAA+TGG | + | chr1_1:69890389-69890408 | None:intergenic | 55.0% | |
| !! | GCTACGTTGACTCTGATGGG+AGG | + | chr1_1:69890399-69890418 | None:intergenic | 55.0% |
| AAACCACCGGGCAAGTGGTT+GGG | - | chr1_1:69891071-69891090 | Msa0039910:CDS | 55.0% | |
| AAACCTCCCAACCACTTGCC+CGG | + | chr1_1:69891080-69891099 | None:intergenic | 55.0% | |
| GGAATAGACTAGGCCGAGCT+AGG | - | chr1_1:69891531-69891550 | Msa0039910:intron | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+CGG | + | chr1_1:69891547-69891566 | None:intergenic | 55.0% | |
| TAAAGCCTAAGCCTGGCCTG+CGG | - | chr1_1:69891590-69891609 | Msa0039910:intron | 55.0% | |
| ACAGGCTAGCAGGCCATATC+AGG | + | chr1_1:69891662-69891681 | None:intergenic | 55.0% | |
| !! | GAGGCTTTTTGAGAGGCCTG+TGG | - | chr1_1:69892035-69892054 | Msa0039910:intron | 55.0% |
| GAAAAAAGTCTGGCCTGGCC+TGG | - | chr1_1:69892113-69892132 | Msa0039910:intron | 55.0% | |
| GAAAGGATAGCCCGGACTTG+GGG | - | chr1_1:69892651-69892670 | Msa0039910:intron | 55.0% | |
| AGCAGTTGTTCCCCAAGTCC+GGG | + | chr1_1:69892664-69892683 | None:intergenic | 55.0% | |
| GAGCAGTTGTTCCCCAAGTC+CGG | + | chr1_1:69892665-69892684 | None:intergenic | 55.0% | |
| ACTTGGGGAACAACTGCTCC+CGG | - | chr1_1:69892666-69892685 | Msa0039910:intron | 55.0% | |
| TCTTCAGCATAAGGCAGGCC+GGG | + | chr1_1:69892687-69892706 | None:intergenic | 55.0% | |
| CTGTGTTTGCGTTCCAGCTC+CGG | - | chr1_1:69892847-69892866 | Msa0039910:intron | 55.0% | |
| CCGCAAGCGGCTTCTTGATA+TGG | - | chr1_1:69892911-69892930 | Msa0039910:intron | 55.0% | |
| GTGCATGGGAGACGGGAATA+TGG | + | chr1_1:69893564-69893583 | None:intergenic | 55.0% | |
| CAGCATAGTGCATGGGAGAC+GGG | + | chr1_1:69893571-69893590 | None:intergenic | 55.0% | |
| CCAGCATAGTGCATGGGAGA+CGG | + | chr1_1:69893572-69893591 | None:intergenic | 55.0% | |
| GCACTATGCTGGACCAACTG+AGG | - | chr1_1:69893580-69893599 | Msa0039910:intron | 55.0% | |
| TGAGGTGCAGTGGCATGCAA+AGG | - | chr1_1:69893598-69893617 | Msa0039910:intron | 55.0% | |
| TGCAGTGGCATGCAAAGGCT+AGG | - | chr1_1:69893603-69893622 | Msa0039910:intron | 55.0% | |
| ATTGTCGGTAGAGACCCTGC+AGG | - | chr1_1:69893650-69893669 | Msa0039910:intron | 55.0% | |
| TGCAGATGCGCACACTTGCT+AGG | - | chr1_1:69894098-69894117 | Msa0039910:CDS | 55.0% | |
| GATTTATGTGCCCTGGTGGC+TGG | - | chr1_1:69894143-69894162 | Msa0039910:CDS | 55.0% | |
| CACTAGACCGGAACAGGTTC+CGG | + | chr1_1:69894223-69894242 | None:intergenic | 55.0% | |
| CAACCACTTGCCCGGTGGTT+TGG | + | chr1_1:69891072-69891091 | None:intergenic | 60.0% | |
| CAAACCACCGGGCAAGTGGT+TGG | - | chr1_1:69891070-69891089 | Msa0039910:CDS | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | - | chr1_1:69891541-69891560 | Msa0039910:intron | 60.0% | |
| GGCTTTGCAAGGCCTAAGCC+TGG | - | chr1_1:69891552-69891571 | Msa0039910:intron | 60.0% | |
| CTCCGGAACCCTGTCCACAA+TGG | - | chr1_1:69892864-69892883 | Msa0039910:intron | 60.0% | |
| GGCCATTGTGGACAGGGTTC+CGG | + | chr1_1:69892869-69892888 | None:intergenic | 60.0% | |
| CCGTCTCCCATGCACTATGC+TGG | - | chr1_1:69893569-69893588 | Msa0039910:intron | 60.0% | |
| CTGGACCAACTGAGGTGCAG+TGG | - | chr1_1:69893588-69893607 | Msa0039910:intron | 60.0% | |
| GCATGCCACTGCACCTCAGT+TGG | + | chr1_1:69893596-69893615 | None:intergenic | 60.0% | |
| GGTAGAGACCCTGCAGGCAT+GGG | - | chr1_1:69893656-69893675 | Msa0039910:intron | 60.0% | |
| TATGTGCCCTGGTGGCTGGA+AGG | - | chr1_1:69894147-69894166 | Msa0039910:CDS | 60.0% | |
| CTAGCACCTTCCAGCCACCA+GGG | + | chr1_1:69894156-69894175 | None:intergenic | 60.0% | |
| ACTAGCACCTTCCAGCCACC+AGG | + | chr1_1:69894157-69894176 | None:intergenic | 60.0% | |
| !! | GAAGGGTGGGCTACCCCACT+TGG | - | chr1_1:69890606-69890625 | Msa0039910:intron | 65.0% |
| GAGCCAAACCACCGGGCAAG+TGG | - | chr1_1:69891066-69891085 | Msa0039910:CDS | 65.0% | |
| GTAGGCCTATGACAGGCCGC+AGG | + | chr1_1:69891609-69891628 | None:intergenic | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | + | chr1_1:69892153-69892172 | None:intergenic | 65.0% | |
| TGTGGACAGGGTTCCGGAGC+TGG | + | chr1_1:69892863-69892882 | None:intergenic | 65.0% | |
| CGGTAGAGACCCTGCAGGCA+TGG | - | chr1_1:69893655-69893674 | Msa0039910:intron | 65.0% | |
| !! | GGGTGGGCTACCCCACTTGG+TGG | - | chr1_1:69890609-69890628 | Msa0039910:intron | 70.0% |
| CCTCCCAACCACTTGCCCGG+TGG | + | chr1_1:69891077-69891096 | None:intergenic | 70.0% | |
| CCACCGGGCAAGTGGTTGGG+AGG | - | chr1_1:69891074-69891093 | Msa0039910:CDS | 70.0% | |
| ACAGGCCGCAGGCCAGGCTT+AGG | + | chr1_1:69891598-69891617 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr1_1:69891604-69891623 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr1_1:69891601-69891620 | Msa0039910:intron | 70.0% | |
| CTACAGCGACAGGCCAGGCC+AGG | + | chr1_1:69892129-69892148 | None:intergenic | 70.0% | |
| CTGGCCTGGCCTGTCGCTGT+AGG | - | chr1_1:69892127-69892146 | Msa0039910:intron | 70.0% | |
| CCTGGCCTGTCGCTGTAGGC+CGG | - | chr1_1:69892131-69892150 | Msa0039910:intron | 70.0% | |
| CGGGATGGCCCATGCCTGCA+GGG | + | chr1_1:69893667-69893686 | None:intergenic | 70.0% | |
| ACGGGATGGCCCATGCCTGC+AGG | + | chr1_1:69893668-69893687 | None:intergenic | 70.0% | |
| CCGGCCTACAGCGACAGGCC+AGG | + | chr1_1:69892134-69892153 | None:intergenic | 75.0% | |
| CCAGGCCGGCCTACAGCGAC+AGG | + | chr1_1:69892139-69892158 | None:intergenic | 75.0% | |
| CCTGTCGCTGTAGGCCGGCC+TGG | - | chr1_1:69892136-69892155 | Msa0039910:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 69890099 | 69894572 | 69890099 | ID=Msa0039910;Name=Msa0039910 |
| chr1_1 | mRNA | 69890099 | 69894572 | 69890099 | ID=Msa0039910-mRNA-1;Parent=Msa0039910;Name=Msa0039910-mRNA-1;_AED=0.00;_eAED=0.00;_QI=216|1|1|1|1|1|5|332|465 |
| chr1_1 | exon | 69890099 | 69890568 | 69890099 | ID=Msa0039910-mRNA-1:exon:22970;Parent=Msa0039910-mRNA-1 |
| chr1_1 | exon | 69890723 | 69890809 | 69890723 | ID=Msa0039910-mRNA-1:exon:22969;Parent=Msa0039910-mRNA-1 |
| chr1_1 | exon | 69890893 | 69891153 | 69890893 | ID=Msa0039910-mRNA-1:exon:22968;Parent=Msa0039910-mRNA-1 |
| chr1_1 | exon | 69891643 | 69892048 | 69891643 | ID=Msa0039910-mRNA-1:exon:22967;Parent=Msa0039910-mRNA-1 |
| chr1_1 | exon | 69893851 | 69894572 | 69893851 | ID=Msa0039910-mRNA-1:exon:22966;Parent=Msa0039910-mRNA-1 |
| chr1_1 | five_prime_UTR | 69894357 | 69894572 | 69894357 | ID=Msa0039910-mRNA-1:five_prime_utr;Parent=Msa0039910-mRNA-1 |
| chr1_1 | CDS | 69893851 | 69894356 | 69893851 | ID=Msa0039910-mRNA-1:cds;Parent=Msa0039910-mRNA-1 |
| chr1_1 | CDS | 69891643 | 69892048 | 69891643 | ID=Msa0039910-mRNA-1:cds;Parent=Msa0039910-mRNA-1 |
| chr1_1 | CDS | 69890893 | 69891153 | 69890893 | ID=Msa0039910-mRNA-1:cds;Parent=Msa0039910-mRNA-1 |
| chr1_1 | CDS | 69890723 | 69890809 | 69890723 | ID=Msa0039910-mRNA-1:cds;Parent=Msa0039910-mRNA-1 |
| chr1_1 | CDS | 69890431 | 69890568 | 69890431 | ID=Msa0039910-mRNA-1:cds;Parent=Msa0039910-mRNA-1 |
| chr1_1 | three_prime_UTR | 69890099 | 69890430 | 69890099 | ID=Msa0039910-mRNA-1:three_prime_utr;Parent=Msa0039910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
