AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0040440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040440 MtrunA17_Chr1g0205451 97.320 1679 37 3 1 1677 1 1673 0.0 3359
Msa0040440 MtrunA17_Chr1g0185491 43.179 755 370 19 350 1082 577 1294 3.17e-178 580
Msa0040440 MtrunA17_Chr2g0316251 39.543 569 307 11 572 1115 726 1282 5.78e-119 409
Msa0040440 MtrunA17_Chr3g0105291 39.855 414 236 8 605 1012 603 1009 3.30e-84 301
Msa0040440 MtrunA17_Chr5g0430361 37.678 422 246 8 599 1012 646 1058 9.71e-78 281
Msa0040440 MtrunA17_Chr7g0259981 38.245 319 166 6 705 1020 11 301 3.43e-74 250
Msa0040440 MtrunA17_Chr5g0407211 35.431 429 243 6 605 1011 3 419 1.04e-69 241
Msa0040440 MtrunA17_Chr5g0407251 34.965 429 245 6 605 1011 3 419 2.10e-68 237
Msa0040440 MtrunA17_Chr7g0270101 36.104 385 237 5 604 985 383 761 3.58e-68 247
Msa0040440 MtrunA17_Chr3g0134821 31.712 514 298 11 512 1011 358 832 3.09e-63 233
Msa0040440 MtrunA17_Chr3g0134811 34.954 329 197 5 689 1011 474 791 8.65e-55 206
Msa0040440 MtrunA17_Chr1g0182481 29.680 438 241 10 620 1011 477 893 4.17e-50 193
Msa0040440 MtrunA17_Chr4g0055731 30.879 421 221 14 602 1011 108 469 2.73e-46 174
Msa0040440 MtrunA17_Chr7g0265211 28.409 440 243 9 630 1011 522 947 8.92e-45 177
Msa0040440 MtrunA17_Chr1g0179841 27.232 448 254 7 620 1009 367 800 4.24e-39 158
Msa0040440 MtrunA17_Chr3g0134851 26.521 411 198 9 642 1017 129 470 2.13e-31 130
Msa0040440 MtrunA17_Chr4g0028111 25.229 436 228 10 652 1018 187 593 1.31e-27 120
Msa0040440 MtrunA17_Chr4g0027811 25.843 445 212 12 621 1012 200 579 4.00e-25 112
Msa0040440 MtrunA17_Chr2g0320451 36.424 151 93 2 860 1009 873 1021 6.04e-22 103
Msa0040440 MtrunA17_Chr2g0320451 38.732 142 74 3 614 754 475 604 4.48e-21 100
Msa0040440 MtrunA17_Chr4g0025251 28.685 251 159 7 779 1012 455 702 4.76e-21 100
Msa0040440 MtrunA17_Chr4g0025251 30.769 130 79 3 635 754 222 350 7.59e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0040440 AT4G14920.3 48.609 1078 473 26 4 1055 5 1027 0.0 902
Msa0040440 AT4G14920.2 48.513 1076 476 26 4 1055 5 1026 0.0 897
Msa0040440 AT4G14920.1 48.513 1076 476 26 4 1055 5 1026 0.0 897
Msa0040440 AT1G05380.3 45.890 1022 430 29 26 1026 21 940 0.0 773
Msa0040440 AT1G05380.1 45.890 1022 430 29 26 1026 21 940 0.0 773
Msa0040440 AT1G05380.2 45.890 1022 430 29 26 1026 21 940 0.0 773
Msa0040440 AT5G36740.5 45.008 631 274 10 390 1014 389 952 1.50e-173 556
Msa0040440 AT5G36740.1 45.008 631 274 10 390 1014 389 952 1.50e-173 556
Msa0040440 AT5G36740.4 44.168 643 272 11 390 1014 236 809 1.83e-170 543
Msa0040440 AT5G36670.4 41.886 647 285 12 390 1014 389 966 4.83e-157 511
Msa0040440 AT5G36670.5 41.886 647 285 12 390 1014 389 966 4.83e-157 511
Msa0040440 AT5G36670.3 41.123 659 283 13 390 1014 236 823 7.93e-154 499
Msa0040440 AT5G36670.1 41.123 659 283 13 390 1014 389 976 7.84e-153 500
Msa0040440 AT5G36670.2 44.211 570 245 10 390 953 389 891 2.38e-150 485
Msa0040440 AT5G36740.2 44.211 570 245 10 390 953 389 891 2.38e-150 485
Msa0040440 AT5G36740.3 44.211 570 245 10 390 953 389 891 2.38e-150 485
Msa0040440 AT3G14980.5 40.000 475 262 8 549 1016 525 983 2.79e-107 371
Msa0040440 AT3G14980.3 40.000 475 262 8 549 1016 570 1028 4.61e-107 368
Msa0040440 AT3G14980.6 40.000 475 262 8 549 1016 570 1028 7.06e-107 371
Msa0040440 AT3G14980.1 40.000 475 262 8 549 1016 570 1028 7.06e-107 371
Msa0040440 AT3G14980.2 40.000 475 262 8 549 1016 570 1028 7.06e-107 371
Msa0040440 AT5G58610.4 37.441 422 249 8 603 1015 366 781 6.62e-81 287
Msa0040440 AT5G58610.8 37.441 422 249 8 603 1015 597 1012 4.82e-79 285
Msa0040440 AT5G58610.2 37.441 422 249 8 603 1015 597 1012 4.82e-79 285
Msa0040440 AT5G58610.3 37.441 422 249 8 603 1015 597 1012 5.29e-79 285
Msa0040440 AT5G58610.7 37.441 422 249 8 603 1015 588 1003 7.88e-79 285
Msa0040440 AT5G58610.5 37.441 422 249 8 603 1015 588 1003 1.22e-78 284
Msa0040440 AT3G14980.4 37.533 381 215 8 549 922 570 934 9.30e-75 270
Msa0040440 AT5G58610.1 36.038 419 233 7 603 1015 588 977 1.36e-73 268
Msa0040440 AT5G58610.6 36.038 419 233 7 603 1015 588 977 1.78e-73 268
Msa0040440 AT5G58610.10 38.333 360 207 8 603 953 597 950 2.09e-67 248
Msa0040440 AT5G58610.9 38.333 360 207 8 603 953 588 941 5.78e-67 246
Msa0040440 AT5G58610.11 36.585 328 193 8 603 921 588 909 7.29e-55 209
Msa0040440 AT2G37520.1 29.478 441 242 10 620 1009 391 813 7.12e-50 192
Msa0040440 AT3G53680.1 29.556 450 229 12 620 1009 408 829 3.57e-47 184
Msa0040440 AT3G53680.2 29.556 450 229 12 620 1009 410 831 4.03e-47 184
Msa0040440 AT2G36720.1 29.194 459 253 12 609 1009 527 971 2.39e-44 176
Msa0040440 AT2G36720.2 29.194 459 253 12 609 1009 527 971 2.39e-44 176
Msa0040440 AT2G27980.1 26.991 452 254 8 620 1009 618 1055 3.04e-42 170
Msa0040440 AT5G63900.1 31.746 315 186 9 705 1014 253 543 3.66e-40 158
Msa0040440 AT5G44800.1 50.980 51 23 1 703 751 70 120 4.73e-11 68.9

Find 466 sgRNAs with CRISPR-Local

Find 690 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCATTGTTAATCTTAT+TGG 0.123742 1_1:+70589672 None:intergenic
CGCTATTATATAAACTATTA+TGG 0.181845 1_1:+70591648 None:intergenic
TAGAAAGCAAACAGAGTTTA+AGG 0.193152 1_1:-70594452 Msa0040440:CDS
TTCATACCAAACTCTTTAAA+AGG 0.207561 1_1:+70588356 Msa0040430:five_prime_UTR
CAAAATTTACAGGTGCAATT+TGG 0.222617 1_1:+70592362 None:intergenic
AACAAAATCCGCTGAGAAAC+AGG 0.259130 1_1:-70594376 Msa0040440:CDS
TGATGACTTTGTTCCATATA+CGG 0.259162 1_1:-70593494 Msa0040440:CDS
ACGAGAATTGGTAGTCCTTC+TGG 0.267036 1_1:-70595260 Msa0040440:CDS
CCTCCGAATTAAGGAATTAC+TGG 0.269556 1_1:+70595767 None:intergenic
GTTTCTCAGTTGTAGCATTC+TGG 0.269926 1_1:+70593617 None:intergenic
GAGAATCCACCGCAGGATTT+TGG 0.280176 1_1:+70588183 Msa0040430:five_prime_UTR
GAGAATCCGACACAGGATTT+TGG 0.283283 1_1:+70588615 Msa0040430:intron
GAGAATCCGACACAGGATTT+TGG 0.283283 1_1:+70589263 Msa0040430:three_prime_UTR
GTTAATCTTATTGGCAAGAT+TGG 0.287010 1_1:+70589681 None:intergenic
GAGAGTCTGACACAGGATTT+TGG 0.290731 1_1:+70588831 Msa0040430:CDS
CAGAACATATATTTAGATTC+TGG 0.291239 1_1:-70593274 Msa0040440:CDS
GATGCTTTGGGTGGTGGTGT+TGG 0.295661 1_1:-70595182 Msa0040440:CDS
ACTTCCTTGTTGCTTGATAA+AGG 0.295798 1_1:+70593696 None:intergenic
GGGAATCCGACACGGGATTT+TGG 0.298063 1_1:+70589047 Msa0040430:three_prime_UTR
AGAAAGGGAGAGAAGAGAAT+TGG 0.303295 1_1:+70595595 None:intergenic
GATAATGACAGGGTTGGTTT+AGG 0.305091 1_1:-70594798 Msa0040440:CDS
GGTGGTGGTGTTGGTGGTGG+TGG 0.312387 1_1:-70595173 Msa0040440:CDS
TTCAGTCGGTTGAATTATAC+TGG 0.314381 1_1:-70590597 Msa0040440:CDS
GTTGTTATCTGTTTCTTCTC+TGG 0.322494 1_1:+70594339 None:intergenic
TGGAGTTGCACTCCACCCTC+TGG 0.322500 1_1:+70591747 None:intergenic
AGGGGAATGGGTTGGAGAGG+AGG 0.334613 1_1:-70594899 Msa0040440:CDS
AGAAACAGGGTTTACTTGTT+AGG 0.338544 1_1:-70594362 Msa0040440:CDS
TCTAAATATATGTTCTGATA+TGG 0.339232 1_1:+70593280 None:intergenic
TTGGGTGGTGGTGTTGGTGG+TGG 0.339894 1_1:-70595176 Msa0040440:CDS
GGCTAGTCCACAAAATTTAC+AGG 0.340018 1_1:+70592352 None:intergenic
TTGGAACTCGCCACATATAT+AGG 0.340838 1_1:-70590282 Msa0040440:CDS
TCTTTCCTCAGAATGAGATT+TGG 0.341013 1_1:+70589594 None:intergenic
ATGGTATGGTTGAGGGGAAT+GGG 0.342550 1_1:-70594911 Msa0040440:CDS
GCCTCCTCTGCCCTTGTTGA+AGG 0.343436 1_1:-70594592 Msa0040440:CDS
CCGCTAGAGGTAGTGTTGAT+AGG 0.344242 1_1:-70594746 Msa0040440:CDS
CTTTCCTGGTTGGTTGACTC+AGG 0.344300 1_1:-70593457 Msa0040440:CDS
CGGCAGATTAAAAGAACTTC+TGG 0.344718 1_1:-70593775 Msa0040440:CDS
GCTTAATTGCGGTTGATTAC+TGG 0.344733 1_1:-70595340 Msa0040440:five_prime_UTR
ATAAGCAATCAAGGTTTATC+TGG 0.345632 1_1:-70589631 Msa0040440:CDS
GTGAAGAATAGAAGCTCTTC+GGG 0.347252 1_1:-70595230 Msa0040440:CDS
CAGGTAAGATCTGATTTAAA+TGG 0.348952 1_1:-70587990 Msa0040440:CDS
TTCGAAGAAAGTAAGGAAAA+AGG 0.349276 1_1:-70595126 Msa0040440:CDS
TGGAGCAGATTCGGCGTAAT+GGG 0.349349 1_1:-70594935 Msa0040440:CDS
TGACGAGTCCATTAGGGTTC+AGG 0.351852 1_1:-70594556 Msa0040440:CDS
ACTGTTCGTTTGCCCGTATA+TGG 0.353796 1_1:+70593481 None:intergenic
ATTAAGCCTGCTGTGGTCAA+TGG 0.360446 1_1:-70589760 Msa0040440:CDS
TTAAACCTGACGAGTCCATT+AGG 0.361937 1_1:-70594563 Msa0040440:CDS
CTGTTGCAGATGCTCCCTCC+TGG 0.363101 1_1:-70592398 Msa0040440:intron
GAAGGCTCTTTGCTCATTGA+AGG 0.365395 1_1:-70590087 Msa0040440:intron
TGCTGGTGAGAGTTCCTTGC+AGG 0.367836 1_1:-70588009 Msa0040440:CDS
TCGCCACATATATAGGAATC+AGG 0.370186 1_1:-70590275 Msa0040440:CDS
GAGGGAGAAGAAAGTTAAGT+TGG 0.370775 1_1:-70594880 Msa0040440:CDS
TCAGAGTTGCTTGGATATAC+AGG 0.371676 1_1:-70593080 Msa0040440:intron
CGAGAATTGGTAGTCCTTCT+GGG 0.372409 1_1:-70595259 Msa0040440:CDS
CTTCGGGGTGTTTGATTGTC+AGG 0.372717 1_1:-70595214 Msa0040440:CDS
TTCCATTCAGTAGATGTTGA+TGG 0.376210 1_1:-70593187 Msa0040440:CDS
TAATTTCTGCAGCATCTATC+AGG 0.376440 1_1:-70590539 Msa0040440:intron
AAACTCTGTTTGCTTTCTAC+TGG 0.378430 1_1:+70594456 None:intergenic
CCTCCGTGGGCGATAGTCTA+TGG 0.378767 1_1:+70594053 None:intergenic
GCTTTGGGTGGTGGTGTTGG+TGG 0.379502 1_1:-70595179 Msa0040440:CDS
GAAAGGGAGAGAAGAGAATT+GGG 0.379687 1_1:+70595596 None:intergenic
ACTATGTTCACCGCCATCTC+CGG 0.380257 1_1:+70594644 None:intergenic
CTCCTTCTAATTCTAGTCAT+GGG 0.380398 1_1:-70589540 Msa0040440:CDS
GAGAATCCGTAACAGGATTT+CGG 0.383109 1_1:+70588399 Msa0040430:five_prime_UTR
TGCCGTCTGGTAGGAGGCTT+GGG 0.387330 1_1:-70595052 Msa0040440:CDS
CTCATTGAAGGTTGAGAAGC+TGG 0.387907 1_1:-70590075 Msa0040440:CDS
GGGAGAGGATGGAGCAGATT+CGG 0.389617 1_1:-70594944 Msa0040440:CDS
CTTGGCGAGGTTCTTGAAGC+TGG 0.389849 1_1:-70588758 Msa0040440:CDS
TAAACCTGACGAGTCCATTA+GGG 0.391952 1_1:-70594562 Msa0040440:CDS
GATGGTATGGTTGAGGGGAA+TGG 0.392853 1_1:-70594912 Msa0040440:CDS
TAGTAGGAAGAGGGAGAGGA+TGG 0.394484 1_1:-70594955 Msa0040440:CDS
GCAAACGAACAGTGCTTTCC+TGG 0.395555 1_1:-70593471 Msa0040440:CDS
ATAGTAGGATGAAGATGAAA+AGG 0.395837 1_1:-70594626 Msa0040440:CDS
CGGGAGATGCTTCTGAATAA+AGG 0.396138 1_1:-70594081 Msa0040440:CDS
GTTGATAGGGAAATTGAATC+TGG 0.400991 1_1:-70594732 Msa0040440:CDS
TGGTGAAATGAGTTGACATT+TGG 0.402188 1_1:+70589462 None:intergenic
GATGCAGTTTACATTAATCC+TGG 0.403299 1_1:-70594015 Msa0040440:CDS
TGTTTGATTGTCAGGAAGAA+GGG 0.404044 1_1:-70595206 Msa0040440:CDS
CCTTCACTCGACTTTGTAGT+TGG 0.404730 1_1:+70594156 None:intergenic
TTCCATGGAAAATGAAAATA+CGG 0.405030 1_1:+70595723 None:intergenic
ATGCCGTCTGGTAGGAGGCT+TGG 0.405273 1_1:-70595053 Msa0040440:CDS
CAATGACACATCAATGAATC+TGG 0.407355 1_1:-70594259 Msa0040440:CDS
AAGAAAATCCTTGTCAAGTA+AGG 0.409824 1_1:-70594316 Msa0040440:CDS
CAACTCTGATGAAATGTTGA+TGG 0.409839 1_1:+70593094 None:intergenic
GGACTACCAATTCTCGTTCC+CGG 0.413496 1_1:+70595266 None:intergenic
TGGTGTTGGGTAGATGGAAC+CGG 0.414682 1_1:-70595285 Msa0040440:exon
GTCACTTGAGAATCCGTAAC+AGG 0.417271 1_1:+70588392 Msa0040430:five_prime_UTR
TTAGCAGAGATGCCTTTCAT+TGG 0.417431 1_1:-70590301 Msa0040440:CDS
CCATTTGTAGAAGTATCATT+TGG 0.417588 1_1:+70589442 None:intergenic
TCCTTCCATGTAGGTTCTGA+GGG 0.417657 1_1:+70593578 None:intergenic
GATGAAAATGTAGATGTATC+TGG 0.418284 1_1:-70588908 Msa0040440:CDS
GGTGAAATGAGTTGACATTT+GGG 0.418392 1_1:+70589463 None:intergenic
CTCTTTGGCATTGTTCGCCT+CGG 0.418656 1_1:+70588502 Msa0040430:five_prime_UTR
AGTCATGAAATCCGAGCTTT+GGG 0.419943 1_1:-70589397 Msa0040440:CDS
GCGTATTATGACAGGGCAAT+TGG 0.420749 1_1:-70594675 Msa0040440:CDS
TAATGGGGATGGTATGGTTG+AGG 0.421102 1_1:-70594919 Msa0040440:CDS
CATGTCGAGGTTCTTGAATC+TGG 0.422150 1_1:-70588542 Msa0040440:CDS
GACCTCATTTCTTGCCTAAG+TGG 0.426381 1_1:+70589984 None:intergenic
TAGTCATGAAATCCGAGCTT+TGG 0.430452 1_1:-70589398 Msa0040440:CDS
GGGGAATGGGTTGGAGAGGA+GGG 0.431647 1_1:-70594898 Msa0040440:CDS
TTCTGTAACATATCAATGCC+AGG 0.432048 1_1:+70589942 None:intergenic
GTGTTTGATTGTCAGGAAGA+AGG 0.432436 1_1:-70595207 Msa0040440:CDS
TTGAATATGTTGGTGTTCCC+TGG 0.435051 1_1:-70589960 Msa0040440:CDS
ATACCACAGGTATCATCATT+TGG 0.435118 1_1:+70593157 None:intergenic
ACACCAGTAATTCCTTAATT+CGG 0.435293 1_1:-70595770 Msa0040440:five_prime_UTR
ATGATTCGGAAGCAGCTAGT+AGG 0.437066 1_1:-70591778 Msa0040440:CDS
ATGGAACCGGGAACGAGAAT+TGG 0.438187 1_1:-70595272 Msa0040440:CDS
TGGTAGTCCTTCTGGGGTTG+TGG 0.444396 1_1:-70595252 Msa0040440:CDS
TCTCAAGATATAAGCAATCA+AGG 0.444665 1_1:-70589640 Msa0040440:CDS
TTCTTTGTCAGTAGTTGCCC+TGG 0.445722 1_1:+70592331 None:intergenic
AGTCGAGTGAAGGGAAAATC+AGG 0.448990 1_1:-70594146 Msa0040440:CDS
TGTTGCAGATGCTCCCTCCT+GGG 0.449595 1_1:-70592397 Msa0040440:intron
CTGAGCACATCATCAGCAAT+AGG 0.450446 1_1:+70593892 None:intergenic
TTCCTTCCATGTAGGTTCTG+AGG 0.450456 1_1:+70593577 None:intergenic
TTATCCTGTCTTAGGTTCCA+TGG 0.451223 1_1:-70590331 Msa0040440:intron
CATGTTGAGGTTGTTGAAGT+TGG 0.452754 1_1:-70588974 Msa0040440:CDS
TATCCTGTCTTAGGTTCCAT+GGG 0.453893 1_1:-70590330 Msa0040440:intron
AATGGTGAACTTGCATATGA+AGG 0.455129 1_1:-70587972 Msa0040440:CDS
AAACTCAACCATTCAATGCT+TGG 0.456332 1_1:+70587853 Msa0040430:five_prime_UTR
AATGAAAATGTAGATGTCTC+TGG 0.457620 1_1:-70588692 Msa0040440:CDS
AATGAAAATGTAGATGTCTC+TGG 0.457620 1_1:-70589124 Msa0040440:CDS
TTGACTGAAAATGCTGTTAC+CGG 0.458865 1_1:-70593655 Msa0040440:CDS
AACGCAAGTTAGAGAGAGAA+AGG 0.459195 1_1:+70595579 None:intergenic
AGATTAGTAGGAAGAGGGAG+AGG 0.459646 1_1:-70594959 Msa0040440:CDS
GGTGAAGAATAGAAGCTCTT+CGG 0.459986 1_1:-70595231 Msa0040440:CDS
TCTCCTTCTAATTCTAGTCA+TGG 0.460387 1_1:-70589541 Msa0040440:CDS
GTCTGGTAGGAGGCTTGGGC+CGG 0.460480 1_1:-70595048 Msa0040440:CDS
AACATTTCATCAGAGTTGCT+TGG 0.461037 1_1:-70593089 Msa0040440:CDS
GTGGTGGTAATGTTGGTGGC+GGG 0.461219 1_1:-70594983 Msa0040440:CDS
ATGACAGGGTTGGTTTAGGA+GGG 0.462187 1_1:-70594794 Msa0040440:CDS
ATGGAGCAGATTCGGCGTAA+TGG 0.463273 1_1:-70594936 Msa0040440:CDS
TGAGTTACTGTTCATATCAA+TGG 0.463556 1_1:+70588217 Msa0040430:five_prime_UTR
GGGAAAATCAGGCGAGGTAG+TGG 0.464343 1_1:-70594135 Msa0040440:CDS
TCTTTGGCATTGTTCCCCTC+AGG 0.464398 1_1:+70588074 Msa0040430:five_prime_UTR
AAAAGAAGAACTCTCCCCTT+TGG 0.464651 1_1:+70593918 None:intergenic
CATGGTTGAACCTGCTTCTG+AGG 0.465736 1_1:-70589335 Msa0040440:CDS
AGAAACTACGAGAACAAATA+CGG 0.467723 1_1:-70594101 Msa0040440:CDS
ACCCCATGACTAGAATTAGA+AGG 0.468716 1_1:+70589538 None:intergenic
GTGAAGGTTTACAAGTTCAA+TGG 0.469904 1_1:+70590228 None:intergenic
TGATTCGGAAGCAGCTAGTA+GGG 0.470785 1_1:-70591777 Msa0040440:CDS
TTTGTTTCTAAGTGTGATGA+AGG 0.471100 1_1:+70594393 None:intergenic
GAAACTGGCGTAAATCCTTC+CGG 0.471329 1_1:-70587894 Msa0040440:CDS
CTTCACTCGACTTTGTAGTT+GGG 0.473279 1_1:+70594157 None:intergenic
AGAAAGCAAACAGAGTTTAA+GGG 0.474283 1_1:-70594451 Msa0040440:CDS
TCCTTTAGTGAATTCATCTC+AGG 0.474890 1_1:-70588735 Msa0040440:CDS
TCCTTTAGTGAATTCATCTC+AGG 0.474890 1_1:-70589167 Msa0040440:CDS
CCAAATGATACTTCTACAAA+TGG 0.475216 1_1:-70589442 Msa0040440:CDS
AGAACTTGAAGAAGTACCTT+GGG 0.475402 1_1:-70591856 Msa0040440:CDS
TTAAGCCTGCTGTGGTCAAT+GGG 0.475498 1_1:-70589759 Msa0040440:CDS
TTTCTGAACTTGTTCATACA+TGG 0.476724 1_1:-70590040 Msa0040440:CDS
CCATGAGGATCTTGCAAAGC+GGG 0.476873 1_1:+70589721 None:intergenic
CACATTGGAGTTGGCAAGAA+GGG 0.478528 1_1:+70592107 None:intergenic
ATTGGCTTGCATCCCGGAGA+TGG 0.478705 1_1:-70594657 Msa0040440:CDS
CATGTTGAGGTTCTCGAAGC+TGG 0.478921 1_1:-70589190 Msa0040440:CDS
TGGGGTTTCCCCTCAGAAGC+AGG 0.479051 1_1:+70589325 Msa0040430:three_prime_UTR
TTTCCTGGTTGGTTGACTCA+GGG 0.479756 1_1:-70593456 Msa0040440:CDS
GCGGGGAGATTAGTAGGAAG+AGG 0.480215 1_1:-70594965 Msa0040440:CDS
AGTTCTGTTCTTAATCATGC+TGG 0.480932 1_1:-70588026 Msa0040440:CDS
AATGACAGGGTTGGTTTAGG+AGG 0.481926 1_1:-70594795 Msa0040440:CDS
TTTGGGTGATGGATCATTGA+TGG 0.481957 1_1:+70589480 None:intergenic
AGTATGATTCGAAGAAAGTA+AGG 0.483975 1_1:-70595133 Msa0040440:CDS
TCGTAGAACAAACGATGATT+CGG 0.484902 1_1:-70591792 Msa0040440:CDS
GGAGGCAGTTTGATAATGAC+AGG 0.486431 1_1:-70594809 Msa0040440:CDS
GTGGTGGTGGTTCGAGTTCG+CGG 0.486671 1_1:-70595160 Msa0040440:CDS
CGCTAGAGGTAGTGTTGATA+GGG 0.486702 1_1:-70594745 Msa0040440:CDS
CCACTTCTCCTATCAACAAC+AGG 0.486781 1_1:+70591683 None:intergenic
AATGGGGATGGTATGGTTGA+GGG 0.489872 1_1:-70594918 Msa0040440:CDS
AGATGCTCCCTCCTGGGGAA+TGG 0.490132 1_1:-70592391 Msa0040440:CDS
GGAGTTGCACTCCACCCTCT+GGG 0.490231 1_1:+70591748 None:intergenic
GACAGGGTTGGTTTAGGAGG+GGG 0.490843 1_1:-70594792 Msa0040440:CDS
CTATGTTCACCGCCATCTCC+GGG 0.490902 1_1:+70594645 None:intergenic
TCCTTTAGTGAATTCGTTCG+AGG 0.491723 1_1:-70588951 Msa0040440:CDS
GAGATGGCGGTGAACATAGT+AGG 0.491811 1_1:-70594641 Msa0040440:CDS
GTCAGAAGGTTCAGTACCGC+AGG 0.492592 1_1:-70593420 Msa0040440:CDS
AAACTTGAGGGTAATACAAC+CGG 0.493948 1_1:-70589900 Msa0040440:CDS
GCAGACACACTGTGGATAAG+AGG 0.494407 1_1:-70594704 Msa0040440:CDS
AGGATGAGCGAGCGGCCAAA+GGG 0.494625 1_1:-70593933 Msa0040440:CDS
CACTTTATTAGTTCGTAACA+AGG 0.496032 1_1:-70593533 Msa0040440:CDS
GATGAAAATGTAGATGTCTC+TGG 0.496914 1_1:-70588476 Msa0040440:CDS
TTGAGGGGAATGGGTTGGAG+AGG 0.500330 1_1:-70594902 Msa0040440:CDS
TACCATCAACATCTACTGAA+TGG 0.500732 1_1:+70593185 None:intergenic
CAAGTTCATGCTTGGTCCCA+AGG 0.500748 1_1:+70591840 None:intergenic
ATGCAGTTTACATTAATCCT+GGG 0.504149 1_1:-70594014 Msa0040440:CDS
GACGAGTCCATTAGGGTTCA+GGG 0.505754 1_1:-70594555 Msa0040440:CDS
TTGGTGGCGGGGAGATTAGT+AGG 0.507616 1_1:-70594971 Msa0040440:CDS
GCAGAGCAAGGAAAACTTGA+GGG 0.508800 1_1:-70589912 Msa0040440:CDS
CACTCAAACTATTACAAACT+CGG 0.510172 1_1:+70595018 None:intergenic
CGGGGAGATTAGTAGGAAGA+GGG 0.511726 1_1:-70594964 Msa0040440:CDS
AAGGAAAACTCGGAAGAAGA+TGG 0.513306 1_1:-70593860 Msa0040440:CDS
TAGTAGGATGAAGATGAAAA+GGG 0.513858 1_1:-70594625 Msa0040440:CDS
GCCTGCATCAAGTTCATGCT+TGG 0.514309 1_1:+70591832 None:intergenic
AGATGAAGAAGAAGAAGCAA+AGG 0.515126 1_1:-70593825 Msa0040440:CDS
TCTTCAAAAGCAATTGATTG+AGG 0.515543 1_1:-70593953 Msa0040440:CDS
TTCTCCTTCAACAAGGGCAG+AGG 0.517888 1_1:+70594588 None:intergenic
TTTGATATGAATGATTCCCT+TGG 0.518099 1_1:-70588776 Msa0040440:CDS
GTTGGGAACTTGTCATGTAC+AGG 0.518784 1_1:+70594174 None:intergenic
GGTCAGTGCAACAGCCAGCT+TGG 0.519968 1_1:+70591727 None:intergenic
GGTGGTGGTAATGTTGGTGG+CGG 0.520411 1_1:-70594984 Msa0040440:CDS
TCCTTCAACAAGGGCAGAGG+AGG 0.520472 1_1:+70594591 None:intergenic
AGATCATGACCGCTGCACTA+AGG 0.520728 1_1:-70592139 Msa0040440:CDS
TCGGCGTAATGGGGATGGTA+TGG 0.521228 1_1:-70594925 Msa0040440:CDS
TTACAAACTCGGATTGTCTC+CGG 0.521610 1_1:+70595029 None:intergenic
TGAGTATGATGGAGTAGGTA+AGG 0.524321 1_1:-70594841 Msa0040440:CDS
GAGTAGGTAAGGAAAGGATG+AGG 0.524377 1_1:-70594830 Msa0040440:CDS
TTTGGACAACGCCATTCCCC+AGG 0.524611 1_1:+70592380 None:intergenic
AGATGCTTCTGAATAAAGGC+TGG 0.526664 1_1:-70594077 Msa0040440:CDS
GGTTGACTCAGGGGTAGTAC+AGG 0.526768 1_1:-70593446 Msa0040440:CDS
TAAGGAAGACAGCAAGGGAA+AGG 0.528531 1_1:-70594298 Msa0040440:CDS
CATAATAGTTTATATAATAG+CGG 0.528567 1_1:-70591647 Msa0040440:CDS
TCCTTTAGTGAATTTGCCTG+AGG 0.528803 1_1:-70588090 Msa0040440:CDS
AGACAGCAAGGGAAAGGAGC+AGG 0.530400 1_1:-70594292 Msa0040440:CDS
CCCTCAGGCAAATTCACTAA+AGG 0.531261 1_1:+70588089 Msa0040430:five_prime_UTR
CCCGCTTTGCAAGATCCTCA+TGG 0.531361 1_1:-70589721 Msa0040440:CDS
CAAACAGAGTTTAAGGGCTG+AGG 0.532224 1_1:-70594445 Msa0040440:CDS
CCCTTCAGTGAGTTCATCTG+AGG 0.532292 1_1:-70588303 Msa0040440:CDS
TAAATAATCAGCACCTTCAC+CGG 0.532915 1_1:+70589881 None:intergenic
AGCTTATTGGTCCATCATCA+AGG 0.533222 1_1:-70593986 Msa0040440:CDS
TATGGTTGAGGGGAATGGGT+TGG 0.533485 1_1:-70594907 Msa0040440:CDS
TTTCTAAGTGTGATGAAGGA+TGG 0.533710 1_1:+70594397 None:intergenic
TTCCCTGATTCCTATATATG+TGG 0.533756 1_1:+70590272 None:intergenic
GGTGGAGTGCAACTCCAAGC+TGG 0.534000 1_1:-70591741 Msa0040440:CDS
CAGGAGGAAGAAAGTAATGC+TGG 0.534163 1_1:-70593401 Msa0040440:CDS
CGAGGTGGTGGTAATGTTGG+TGG 0.534507 1_1:-70594987 Msa0040440:CDS
GATGACTTTGTTCCATATAC+GGG 0.534774 1_1:-70593493 Msa0040440:CDS
CGTGATGAGGTTGTAGAAGC+CGG 0.535401 1_1:-70588326 Msa0040440:CDS
CATGTCGAGGTTCTTGAAGC+TGG 0.536459 1_1:-70588113 Msa0040440:CDS
AGGGCAATTGGCTTGCATCC+CGG 0.537695 1_1:-70594663 Msa0040440:CDS
TCCTTCTAATTCTAGTCATG+GGG 0.538290 1_1:-70589539 Msa0040440:CDS
CCTGTTGTTGATAGGAGAAG+TGG 0.538850 1_1:-70591683 Msa0040440:CDS
GGGAAAGGAGCAGGATTCAG+AGG 0.540282 1_1:-70594283 Msa0040440:CDS
ATGGTGAACTTGCATATGAA+GGG 0.541446 1_1:-70587971 Msa0040440:CDS
ATAATAGTTTATATAATAGC+GGG 0.541633 1_1:-70591646 Msa0040440:intron
TGAACCCTAATGGACTCGTC+AGG 0.541907 1_1:+70594558 None:intergenic
TTAAGGAATTACTGGTGTTG+TGG 0.541967 1_1:+70595775 None:intergenic
ATGATGGAGTAGGTAAGGAA+AGG 0.542342 1_1:-70594836 Msa0040440:CDS
GAGAACTTGAAGAAGTACCT+TGG 0.542928 1_1:-70591857 Msa0040440:CDS
AATTCATATCAGTGAAAGCA+TGG 0.542955 1_1:+70589305 Msa0040430:three_prime_UTR
GCCACTCGGGAATCCGACAC+GGG 0.543003 1_1:+70589040 Msa0040430:three_prime_UTR
GGGGAGTTAGTGATGCCGTC+TGG 0.543743 1_1:-70595065 Msa0040440:CDS
ACCAAGCATGAACTTGATGC+AGG 0.544111 1_1:-70591833 Msa0040440:CDS
ACAGGATTTCGGTCATGCCC+TGG 0.546439 1_1:+70588410 Msa0040430:five_prime_UTR
ACGAACAGTGCTTTCCTGGT+TGG 0.546850 1_1:-70593467 Msa0040440:CDS
GCCTCGGACAAATTCGCTAA+AGG 0.548533 1_1:+70588518 Msa0040430:five_prime_UTR
GATGGTTAATAAGAAGAAGG+TGG 0.548717 1_1:-70594511 Msa0040440:CDS
ATGCTCTGACACATTGGAGT+TGG 0.549870 1_1:+70592098 None:intergenic
ATGAGTTGACATTTGGGTGA+TGG 0.550172 1_1:+70589469 None:intergenic
AGCATCATAGGCCTTGATGA+TGG 0.550380 1_1:+70593975 None:intergenic
TGCTTAATTGCGCTTAATTG+CGG 0.550679 1_1:-70595351 Msa0040440:five_prime_UTR
TGACCGCTGCACTAAGGACA+TGG 0.551307 1_1:-70592133 Msa0040440:CDS
TAGGTAAGGAAAGGATGAGG+AGG 0.551778 1_1:-70594827 Msa0040440:CDS
CAGTTTGATAATGACAGGGT+TGG 0.551889 1_1:-70594804 Msa0040440:CDS
GATGACGTGGCGAGATCTGA+GGG 0.552382 1_1:+70595838 None:intergenic
CGAGTGATTCAGAATCGAGC+GGG 0.552839 1_1:-70595085 Msa0040440:CDS
TGAACAAGTTCAGAAATTGC+AGG 0.553034 1_1:+70590047 None:intergenic
GGTGATGGTTAATAAGAAGA+AGG 0.553317 1_1:-70594514 Msa0040440:CDS
AATGAGGTCATTGAATATGT+TGG 0.553623 1_1:-70589970 Msa0040440:CDS
GATGCTGAGCAATTTGAGAA+TGG 0.554115 1_1:-70589796 Msa0040440:CDS
CCATGTTCTTTACAGTAGCT+AGG 0.556120 1_1:+70589353 None:intergenic
GCATGACCGAAATCCTGTTA+CGG 0.556637 1_1:-70588405 Msa0040440:CDS
CAGTTGCTTGACCCAAAGCT+CGG 0.557532 1_1:+70589386 None:intergenic
GCTGTCTTCCTTACTTGACA+AGG 0.557539 1_1:+70594308 None:intergenic
AACTTGATGCAGGCTTTACA+TGG 0.557990 1_1:-70591823 Msa0040440:CDS
GCCTGAGATGAATTCACTAA+AGG 0.558076 1_1:+70588734 Msa0040430:CDS
GCCTGAGATGAATTCACTAA+AGG 0.558076 1_1:+70589166 Msa0040430:three_prime_UTR
CGGCGAATTGATTCACTCAT+CGG 0.558668 1_1:-70595528 Msa0040440:five_prime_UTR
ACATGTCATTATCCGCCACT+CGG 0.559652 1_1:+70589026 Msa0040430:three_prime_UTR
TCTAACCCATTGACCACAGC+AGG 0.559755 1_1:+70589754 None:intergenic
TGGTGGTAATGTTGGTGGCG+GGG 0.560173 1_1:-70594982 Msa0040440:CDS
CCCTCGAACGAATTCACTAA+AGG 0.560356 1_1:+70588950 Msa0040430:three_prime_UTR
GATGATACCTGTGGTATATG+TGG 0.560544 1_1:-70593151 Msa0040440:CDS
GGCTGTTGCACTGACCGTGA+TGG 0.561103 1_1:-70591720 Msa0040440:CDS
AGAAAGTAATGCTGGAGGGA+TGG 0.561552 1_1:-70593393 Msa0040440:CDS
ATGGTTGAACCTGCTTCTGA+GGG 0.561744 1_1:-70589334 Msa0040440:CDS
CACATCTTGAGGAACCACTT+AGG 0.562132 1_1:-70589998 Msa0040440:CDS
CCCTCAGATGAACTCACTGA+AGG 0.562209 1_1:+70588302 Msa0040430:five_prime_UTR
TTTACAGGTCAAACTTCAGT+CGG 0.562334 1_1:-70590611 Msa0040440:intron
CGCCACTCGGGAATCCGACA+CGG 0.562372 1_1:+70589039 Msa0040430:three_prime_UTR
GTTTGATTGTCAGGAAGAAG+GGG 0.562596 1_1:-70595205 Msa0040440:CDS
CAACTTCAACAACCTCAACA+TGG 0.562639 1_1:+70588975 Msa0040430:three_prime_UTR
GTCAAGTAAGGAAGACAGCA+AGG 0.562705 1_1:-70594304 Msa0040440:CDS
AATGACCCTCAGAACCTACA+TGG 0.563519 1_1:-70593583 Msa0040440:CDS
TCAAAGTTCGAGCTTCATGC+AGG 0.565026 1_1:-70593319 Msa0040440:CDS
CAGTAATTCCTTAATTCGGA+GGG 0.565165 1_1:-70595766 Msa0040440:five_prime_UTR
CTGTTGTTGATAGGAGAAGT+GGG 0.565450 1_1:-70591682 Msa0040440:CDS
CAGATTCGGCGTAATGGGGA+TGG 0.565766 1_1:-70594930 Msa0040440:CDS
CGCCACATATATAGGAATCA+GGG 0.566297 1_1:-70590274 Msa0040440:CDS
AGTGCTCTTGAGCGAGGTGG+TGG 0.566499 1_1:-70594999 Msa0040440:CDS
TTCTACAAATGGTCTTCCAT+CGG 0.566705 1_1:-70589431 Msa0040440:CDS
GTTGCAGATGCTCCCTCCTG+GGG 0.568272 1_1:-70592396 Msa0040440:intron
GGCTTGCATCCCGGAGATGG+CGG 0.569797 1_1:-70594654 Msa0040440:CDS
GTCAGTCTCAGCACTATCAC+CGG 0.570581 1_1:+70587875 Msa0040430:five_prime_UTR
GGGCTGAGGGCACTTCTAAG+AGG 0.570925 1_1:-70594431 Msa0040440:CDS
ATTCATATCAGTGAAAGCAT+GGG 0.571063 1_1:+70589306 Msa0040430:three_prime_UTR
GCCACTTGAGAATCCACCGC+AGG 0.571330 1_1:+70588176 Msa0040430:five_prime_UTR
GTCAATTAACAAGGAAAACT+CGG 0.572356 1_1:-70593870 Msa0040440:CDS
CATGTCATTATCCGCCACTC+GGG 0.572554 1_1:+70589027 Msa0040430:three_prime_UTR
GGAATCAGGGAATGTGCCGC+CGG 0.573151 1_1:-70590261 Msa0040440:CDS
CCTTTAGTGAATTCGTTCGA+GGG 0.574011 1_1:-70588950 Msa0040440:CDS
GAGGATGAGCGAGCGGCCAA+AGG 0.574037 1_1:-70593934 Msa0040440:CDS
ACCTGTGGTATATGTGGAGA+TGG 0.575292 1_1:-70593145 Msa0040440:CDS
TAGTGATGCCGTCTGGTAGG+AGG 0.576179 1_1:-70595058 Msa0040440:CDS
TGACAGGGTTGGTTTAGGAG+GGG 0.576223 1_1:-70594793 Msa0040440:CDS
GAGCGAGGTGGTGGTAATGT+TGG 0.576316 1_1:-70594990 Msa0040440:CDS
TGACTATCTGAGTGATCCGA+TGG 0.577926 1_1:+70589415 None:intergenic
ACGCAAGTTAGAGAGAGAAA+GGG 0.578665 1_1:+70595580 None:intergenic
TTCTTCACCACAACCCCAGA+AGG 0.579406 1_1:+70595245 None:intergenic
GGTGTTGGGTAGATGGAACC+GGG 0.579932 1_1:-70595284 Msa0040440:exon
AAAGGAATGCTCTGACACAT+TGG 0.580699 1_1:+70592092 None:intergenic
GAGACTGACCAAGCATTGAA+TGG 0.582327 1_1:-70587861 Msa0040440:CDS
TGATGACGTGGCGAGATCTG+AGG 0.582578 1_1:+70595837 None:intergenic
CCAGTAATTCCTTAATTCGG+AGG 0.582598 1_1:-70595767 Msa0040440:five_prime_UTR
TTAAACTTCTCCTTCAACAA+GGG 0.582903 1_1:+70594582 None:intergenic
GATATGAATAATAATTCACC+AGG 0.583218 1_1:-70588428 Msa0040440:CDS
ACACATTGGAGTTGGCAAGA+AGG 0.585027 1_1:+70592106 None:intergenic
ATGGTTAATAAGAAGAAGGT+GGG 0.586213 1_1:-70594510 Msa0040440:CDS
CAACTACAAAGTCGAGTGAA+GGG 0.586684 1_1:-70594155 Msa0040440:CDS
TCCATCTCCACATATACCAC+AGG 0.588605 1_1:+70593144 None:intergenic
AGTTAGTGATGCCGTCTGGT+AGG 0.589318 1_1:-70595061 Msa0040440:CDS
CCTTTAGTGAATTTGCCTGA+GGG 0.589636 1_1:-70588089 Msa0040440:CDS
TTCCTGGTTGGTTGACTCAG+GGG 0.590106 1_1:-70593455 Msa0040440:CDS
TAAATCAGATCTTACCTGCA+AGG 0.590335 1_1:+70587995 Msa0040430:five_prime_UTR
GTTAATAAGAAGAAGGTGGG+TGG 0.591496 1_1:-70594507 Msa0040440:CDS
GATCGAGAATCTTACCTCAC+CGG 0.591978 1_1:+70595494 None:intergenic
CCTAGCTACTGTAAAGAACA+TGG 0.592814 1_1:-70589353 Msa0040440:CDS
CTTTAGTGAATTTGCCTGAG+GGG 0.593156 1_1:-70588088 Msa0040440:CDS
TACCCCTGAGTCAACCAACC+AGG 0.593171 1_1:+70593453 None:intergenic
GAGGGATGGATCACAAGAGA+AGG 0.593899 1_1:-70593379 Msa0040440:CDS
TAGGGGAGTCACCCAGAGGG+TGG 0.594341 1_1:-70591759 Msa0040440:CDS
TTGGGTGATGGATCATTGAT+GGG 0.595942 1_1:+70589481 None:intergenic
AGATGAACTCACTGAAGGGC+CGG 0.595962 1_1:+70588307 Msa0040430:five_prime_UTR
AAGTGTGATGAAGGATGGAT+CGG 0.596760 1_1:+70594402 None:intergenic
TTAATAAGAAGAAGGTGGGT+GGG 0.597820 1_1:-70594506 Msa0040440:CDS
AATAGTCTCTATTCCTCCGT+GGG 0.597822 1_1:+70594040 None:intergenic
TGCAGTTTACATTAATCCTG+GGG 0.598594 1_1:-70594013 Msa0040440:CDS
ACCCTCAGAACCTACATGGA+AGG 0.599339 1_1:-70593579 Msa0040440:CDS
GAGGGTAATACAACCGGTGA+AGG 0.600378 1_1:-70589894 Msa0040440:intron
GGTGTTGTGGACGGTGGAGA+TGG 0.600439 1_1:+70595788 None:intergenic
ATGTGGCGAGTTCCAATGAA+AGG 0.601954 1_1:+70590289 None:intergenic
AAACAGAGTTTAAGGGCTGA+GGG 0.604380 1_1:-70594444 Msa0040440:CDS
AACTTCAACAACCTCAACAT+GGG 0.605269 1_1:+70588976 Msa0040430:three_prime_UTR
TGCGGTGGATTCTCAAGTGG+CGG 0.605639 1_1:-70588174 Msa0040440:CDS
GGAGATTTAATCTGCTGTGA+TGG 0.605685 1_1:-70593121 Msa0040440:CDS
CACCCATGTCCTTAGTGCAG+CGG 0.605987 1_1:+70592130 None:intergenic
AGGATGAAGATGAAAAGGGA+TGG 0.606344 1_1:-70594621 Msa0040440:CDS
AGCTTCAAGAACCTCGCCAA+GGG 0.606699 1_1:+70588760 Msa0040430:CDS
TCCTTTAGCGAATTTGTCCG+AGG 0.606919 1_1:-70588519 Msa0040440:CDS
TCCTGTGTCGGATTCTCAAG+TGG 0.606928 1_1:-70588609 Msa0040440:CDS
CCTCAGATGAACTCACTGAA+GGG 0.607985 1_1:+70588303 Msa0040430:five_prime_UTR
CAGAAGCTTCTAGCAGAGCA+AGG 0.609901 1_1:-70589924 Msa0040440:CDS
GGTAGTACAGGTAAGTCAGA+AGG 0.611372 1_1:-70593434 Msa0040440:CDS
AGAAGGTTCAGTACCGCAGG+AGG 0.611421 1_1:-70593417 Msa0040440:CDS
CAGCTTCGAGAACCTCAACA+TGG 0.611900 1_1:+70589191 Msa0040430:three_prime_UTR
TTTGATGAGTATGATGGAGT+AGG 0.613215 1_1:-70594846 Msa0040440:CDS
GAAACTACGAGAACAAATAC+GGG 0.613270 1_1:-70594100 Msa0040440:CDS
ATGGGGATGGTATGGTTGAG+GGG 0.615259 1_1:-70594917 Msa0040440:CDS
CCAACTACAAAGTCGAGTGA+AGG 0.615291 1_1:-70594156 Msa0040440:CDS
CAGCTTCAAGAACCTCGACA+TGG 0.616163 1_1:+70588114 Msa0040430:five_prime_UTR
CAGATTCAAGAACCTCGACA+TGG 0.616350 1_1:+70588543 Msa0040430:exon
CGATGAGTGAATCAATTCGC+CGG 0.616434 1_1:+70595529 None:intergenic
TATATGTTCTGATATGGCTG+AGG 0.616498 1_1:+70593286 None:intergenic
TCTCTGCTAACTTAGTCCCA+TGG 0.618156 1_1:+70590314 None:intergenic
GGAAGGAAAAGTAGAAAACA+TGG 0.618815 1_1:-70593562 Msa0040440:CDS
TTTGATTGTCAGGAAGAAGG+GGG 0.619581 1_1:-70595204 Msa0040440:CDS
TGTGTCGGATTCTCAAGTAG+TGG 0.620961 1_1:-70589254 Msa0040440:CDS
TCCTGCGGTGGATTCTCAAG+TGG 0.621253 1_1:-70588177 Msa0040440:CDS
TTTAAACTTCTCCTTCAACA+AGG 0.621456 1_1:+70594581 None:intergenic
GGGTTCTATTAAGCCTGCTG+TGG 0.622392 1_1:-70589767 Msa0040440:CDS
CCTTCAGTGAGTTCATCTGA+GGG 0.622558 1_1:-70588302 Msa0040440:CDS
GTGCTCCAAATCTCATTCTG+AGG 0.625528 1_1:-70589599 Msa0040440:CDS
GACAACGCCATTCCCCAGGA+GGG 0.625795 1_1:+70592384 None:intergenic
AGCTCCTTTATCAAGCAACA+AGG 0.626271 1_1:-70593700 Msa0040440:CDS
GATATGAATTGTGATTCCCC+AGG 0.628187 1_1:-70588644 Msa0040440:CDS
TGTGTCAGACTCTCAAGTGG+TGG 0.628367 1_1:-70588822 Msa0040440:CDS
TCTTGACCAAAATCCTGTGT+CGG 0.630072 1_1:-70589269 Msa0040440:CDS
GCAATTTGAGAATGGAGACG+TGG 0.630193 1_1:-70589788 Msa0040440:CDS
AGTTTGAGTGCTCTTGAGCG+AGG 0.630478 1_1:-70595005 Msa0040440:CDS
GTCTCAGCACTATCACCGGA+AGG 0.631549 1_1:+70587879 Msa0040430:five_prime_UTR
TCCTGTGTCAGACTCTCAAG+TGG 0.632819 1_1:-70588825 Msa0040440:CDS
GCAAGATCCTCATGGAAGTG+AGG 0.633673 1_1:-70589713 Msa0040440:CDS
CAATTTGAGAATGGAGACGT+GGG 0.634220 1_1:-70589787 Msa0040440:CDS
TTCATATCAGTGAAAGCATG+GGG 0.634242 1_1:+70589307 Msa0040430:three_prime_UTR
GCATTACTTTCTTCCTCCTG+CGG 0.634533 1_1:+70593404 None:intergenic
GGAGCAGATTCGGCGTAATG+GGG 0.634751 1_1:-70594934 Msa0040440:CDS
AACCACTTAGGCAAGAAATG+AGG 0.636144 1_1:-70589986 Msa0040440:CDS
ACTTGACCAAAATCCTGTGT+CGG 0.636890 1_1:-70588621 Msa0040440:CDS
CCGGCGAAAACAAAACTGAT+CGG 0.638101 1_1:+70595548 None:intergenic
TATGAATGATTCCCTTGGCG+AGG 0.638237 1_1:-70588771 Msa0040440:CDS
ATGTGCTCAGTCAATTAACA+AGG 0.638465 1_1:-70593879 Msa0040440:CDS
TACAGTGCCAGATAGATGCG+TGG 0.639281 1_1:-70593240 Msa0040440:CDS
GGAATTACTGGTGTTGTGGA+CGG 0.639863 1_1:+70595779 None:intergenic
AGCTTCAAGAACCTCGACAT+GGG 0.640445 1_1:+70588115 Msa0040430:five_prime_UTR
GGAAAAGTAGAAAACATGGA+AGG 0.641351 1_1:-70593558 Msa0040440:CDS
CTTTAGTGAATTCGTTCGAG+GGG 0.641785 1_1:-70588949 Msa0040440:CDS
CAGCTTCAAGAACCTCGCCA+AGG 0.642345 1_1:+70588759 Msa0040430:CDS
AGCTTCGAGAACCTCAACAT+GGG 0.642446 1_1:+70589192 Msa0040430:three_prime_UTR
GGATGAGCGAGCGGCCAAAG+GGG 0.643238 1_1:-70593932 Msa0040440:CDS
AGGATTGATGACATTGATAG+CGG 0.644594 1_1:-70593805 Msa0040440:CDS
TAGTAGGGGAGTCACCCAGA+GGG 0.645271 1_1:-70591762 Msa0040440:CDS
AGCAGAGCAAGGAAAACTTG+AGG 0.645794 1_1:-70589913 Msa0040440:CDS
GCCACTTGAGAATCCGACAC+AGG 0.646474 1_1:+70588608 Msa0040430:intron
GAGAATTGGTAGTCCTTCTG+GGG 0.646751 1_1:-70595258 Msa0040440:CDS
AAATAGTCTCTATTCCTCCG+TGG 0.647518 1_1:+70594039 None:intergenic
GGAACAATGCACGCCGCTAG+AGG 0.648304 1_1:-70594759 Msa0040440:CDS
TCTTGACCAAAATCCTGCGG+TGG 0.648689 1_1:-70588189 Msa0040440:CDS
TCTGTAACATATCAATGCCA+GGG 0.648840 1_1:+70589943 None:intergenic
ACTTTATTAGTTCGTAACAA+GGG 0.650281 1_1:-70593532 Msa0040440:CDS
ATCACCCCGCTCCAAAATAG+CGG 0.650643 1_1:+70590566 None:intergenic
ACAGTGCCAGATAGATGCGT+GGG 0.651131 1_1:-70593239 Msa0040440:CDS
ACAAAATCCGCTGAGAAACA+GGG 0.652180 1_1:-70594375 Msa0040440:CDS
CGGCTTCTACAACCTCATCA+CGG 0.654350 1_1:+70588327 Msa0040430:five_prime_UTR
TATGAATGATGCCCATGTTG+AGG 0.654727 1_1:-70588987 Msa0040440:CDS
TATGAATGATGCCCATGTTG+AGG 0.654727 1_1:-70589203 Msa0040440:CDS
TGTTACGGATTCTCAAGTGA+CGG 0.655586 1_1:-70588390 Msa0040440:CDS
TCAAGTAAGGAAGACAGCAA+GGG 0.655759 1_1:-70594303 Msa0040440:CDS
AGGAAGAAAGTAATGCTGGA+GGG 0.655950 1_1:-70593397 Msa0040440:CDS
CCTATCAACACTACCTCTAG+CGG 0.656629 1_1:+70594746 None:intergenic
GATATGAATTGTGATTCACC+AGG 0.656707 1_1:-70589076 Msa0040440:CDS
GGCCCAAGCCTCCTACCAGA+CGG 0.657096 1_1:+70595050 None:intergenic
GGACAACGCCATTCCCCAGG+AGG 0.661498 1_1:+70592383 None:intergenic
AATGTTGCTTTATAAAACCA+TGG 0.661502 1_1:+70595625 None:intergenic
GAGGAAGAAAGTAATGCTGG+AGG 0.661994 1_1:-70593398 Msa0040440:CDS
ACCACTTGAGAGTCTGACAC+AGG 0.663535 1_1:+70588824 Msa0040430:CDS
CGTGTCGGATTCCCGAGTGG+CGG 0.663733 1_1:-70589038 Msa0040440:CDS
ACTACTTGAGAATCCGACAC+AGG 0.665932 1_1:+70589256 Msa0040430:three_prime_UTR
GACCGCTGCACTAAGGACAT+GGG 0.667260 1_1:-70592132 Msa0040440:CDS
GATTCGGAAGCAGCTAGTAG+GGG 0.669456 1_1:-70591776 Msa0040440:CDS
GCTAGACCAAAATCCCGTGT+CGG 0.669834 1_1:-70589053 Msa0040440:CDS
TTGAGTGCTCTTGAGCGAGG+TGG 0.669938 1_1:-70595002 Msa0040440:CDS
ATTGATTGAGGATGAGCGAG+CGG 0.670575 1_1:-70593941 Msa0040440:CDS
TATGAATGATACCCATGTCG+AGG 0.673396 1_1:-70588126 Msa0040440:CDS
TATGAATGATACCCATGTCG+AGG 0.673396 1_1:-70588555 Msa0040440:CDS
AGATTCAAGAACCTCGACAT+GGG 0.676487 1_1:+70588544 Msa0040430:exon
GGACCATAGACTATCGCCCA+CGG 0.678115 1_1:-70594056 Msa0040440:CDS
GATATGAACAGTAACTCACC+AGG 0.679687 1_1:-70588212 Msa0040440:CDS
GATGTGAATTGTGATTCACC+AGG 0.680299 1_1:-70588860 Msa0040440:CDS
TCGAGTGATTCAGAATCGAG+CGG 0.682645 1_1:-70595086 Msa0040440:CDS
ATTACTGGTGTTGTGGACGG+TGG 0.683122 1_1:+70595782 None:intergenic
CATGGAAAATGAAAATACGG+TGG 0.684240 1_1:+70595726 None:intergenic
GAGGCAGTTTGATAATGACA+GGG 0.685229 1_1:-70594808 Msa0040440:CDS
TCCCGTGTCGGATTCCCGAG+TGG 0.686587 1_1:-70589041 Msa0040440:CDS
TGGTTCAAGCAGACACACTG+TGG 0.691375 1_1:-70594712 Msa0040440:CDS
TGTGTCGGATTCTCAAGTGG+CGG 0.691967 1_1:-70588606 Msa0040440:CDS
CTAGTAGGGGAGTCACCCAG+AGG 0.692721 1_1:-70591763 Msa0040440:CDS
TATGAATGATGTCCGTGATG+AGG 0.692907 1_1:-70588339 Msa0040440:CDS
GATATGAATTGTGATTCACC+AGG 0.696700 1_1:-70589292 Msa0040440:CDS
TCCATGAGGATCTTGCAAAG+CGG 0.697072 1_1:+70589720 None:intergenic
GCAGTTTACATTAATCCTGG+GGG 0.701529 1_1:-70594012 Msa0040440:CDS
ACATTGATAGCGGAAAAGAA+CGG 0.701762 1_1:-70593795 Msa0040440:CDS
AGGTCTTGACCAAAATCCTG+CGG 0.705499 1_1:-70588192 Msa0040440:CDS
GCTCGAACTTTGAAACTGTG+AGG 0.705555 1_1:+70593329 None:intergenic
TGGTTGAACCTGCTTCTGAG+GGG 0.706511 1_1:-70589333 Msa0040440:CDS
AAGTAAACCCTGTTTCTCAG+CGG 0.707883 1_1:+70594368 None:intergenic
TGTGGTATATGTGGAGATGG+AGG 0.708453 1_1:-70593142 Msa0040440:CDS
AGTGAAGGGAAAATCAGGCG+AGG 0.715224 1_1:-70594141 Msa0040440:CDS
GAGTGATTCAGAATCGAGCG+GGG 0.717424 1_1:-70595084 Msa0040440:CDS
ATATGAATTGTGATTCACCA+GGG 0.718721 1_1:-70589075 Msa0040440:CDS
TGTTGTTGATAGGAGAAGTG+GGG 0.719238 1_1:-70591681 Msa0040440:CDS
CTAGCATCCTCACTTCCATG+AGG 0.724107 1_1:+70589706 None:intergenic
GATCCAAATGATGATACCTG+TGG 0.724451 1_1:-70593160 Msa0040440:CDS
ACAAGAGAAGGCATTCACTG+TGG 0.729027 1_1:-70593367 Msa0040440:CDS
CTTCAGTGAGTTCATCTGAG+GGG 0.729179 1_1:-70588301 Msa0040440:CDS
ACTGAAAATGCTGTTACCGG+TGG 0.733563 1_1:-70593652 Msa0040440:CDS
ATGTGAATTGTGATTCACCA+GGG 0.734028 1_1:-70588859 Msa0040440:CDS
CCATAGACTATCGCCCACGG+AGG 0.759286 1_1:-70594053 Msa0040440:CDS
TGAAGAATAGAAGCTCTTCG+GGG 0.761353 1_1:-70595229 Msa0040440:CDS
ATATGAATAATAATTCACCA+GGG 0.793367 1_1:-70588427 Msa0040440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAAGTTTTTTTTTTTTTT+TGG - chr1_1:70590715-70590734 Msa0040440:intron 10.0%
!!! GTAAGTTTTTTTTTTTTTTT+GGG - chr1_1:70590716-70590735 Msa0040440:intron 10.0%
!!! AAGCTTTTTTTTTAAAAAAA+AGG + chr1_1:70590744-70590763 None:intergenic 10.0%
!!! TTTTTTTAAAAAAAAAGCTT+TGG - chr1_1:70590744-70590763 Msa0040440:intron 10.0%
!! AAAATATTATAATCGAATAA+AGG + chr1_1:70590919-70590938 None:intergenic 10.0%
!!! AATTTCTTATTTTTATTTCT+GGG - chr1_1:70591128-70591147 Msa0040440:intron 10.0%
!!! GAAAAATATTTTTCAAAAAA+AGG - chr1_1:70592466-70592485 Msa0040440:intron 10.0%
!! ATTATTAAATACATTTAATG+GGG - chr1_1:70592959-70592978 Msa0040440:intron 10.0%
!!! TATATTTTTTTTAACCTTTA+TGG - chr1_1:70593043-70593062 Msa0040440:intron 10.0%
!!! ATATTTTTTTTAACCTTTAT+GGG - chr1_1:70593044-70593063 Msa0040440:intron 10.0%
!!! TTTTTTTTTTTTTTTTGCGT+TGG - chr1_1:70588300-70588319 Msa0040440:CDS 15.0%
!!! TATTCATTTTATTTTGCTTT+TGG - chr1_1:70590639-70590658 Msa0040440:intron 15.0%
!!! ATTCATTTTATTTTGCTTTT+GGG - chr1_1:70590640-70590659 Msa0040440:intron 15.0%
!!! ATGGTTTTTCAAATTTTAAT+TGG - chr1_1:70590676-70590695 Msa0040440:intron 15.0%
!!! TGGTTTTTCAAATTTTAATT+GGG - chr1_1:70590677-70590696 Msa0040440:intron 15.0%
!!! CAATTTCTTATTTTTATTTC+TGG - chr1_1:70591127-70591146 Msa0040440:intron 15.0%
!!! ATTTCTTATTTTTATTTCTG+GGG - chr1_1:70591129-70591148 Msa0040440:intron 15.0%
!! CATAATAGTTTATATAATAG+CGG - chr1_1:70592045-70592064 Msa0040440:intron 15.0%
!! ATAATAGTTTATATAATAGC+GGG - chr1_1:70592046-70592065 Msa0040440:intron 15.0%
!! TAGAAAGAAAAATGATAAAA+AGG + chr1_1:70592179-70592198 None:intergenic 15.0%
!!! AAATATTTTTCAAAAAAAGG+AGG - chr1_1:70592469-70592488 Msa0040440:intron 15.0%
!! TTAATAATATAAGACAAACA+AGG + chr1_1:70592947-70592966 None:intergenic 15.0%
!!! TACATTTTTATTATTCTCTT+TGG + chr1_1:70595424-70595443 None:intergenic 15.0%
!! TCTAAATATATGTTCTGATA+TGG + chr1_1:70590415-70590434 None:intergenic 20.0%
!!! TTTTAAAAAAAAAGCTTTGG+TGG - chr1_1:70590747-70590766 Msa0040440:intron 20.0%
!!! TTTAAAAAAAAAGCTTTGGT+GGG - chr1_1:70590748-70590767 Msa0040440:intron 20.0%
!!! ATATTCAGAATTGGTATTTT+GGG - chr1_1:70590958-70590977 Msa0040440:intron 20.0%
!!! TTTCTTATTTTTATTTCTGG+GGG - chr1_1:70591130-70591149 Msa0040440:intron 20.0%
!! TGATAAACTATTATAGTTTG+TGG + chr1_1:70591195-70591214 None:intergenic 20.0%
!! AATAACTTCAAATCTAAACA+AGG + chr1_1:70591452-70591471 None:intergenic 20.0%
!! CGCTATTATATAAACTATTA+TGG + chr1_1:70592047-70592066 None:intergenic 20.0%
!! CTAATTTAAGTAGTTTCAAA+GGG - chr1_1:70592221-70592240 Msa0040440:intron 20.0%
!! TAATTTAAGTAGTTTCAAAG+GGG - chr1_1:70592222-70592241 Msa0040440:intron 20.0%
!! AATTTCGAAATTGATAGAAA+TGG + chr1_1:70592355-70592374 None:intergenic 20.0%
!!! GTTTTCTGTTTATTTTTTAC+AGG - chr1_1:70593066-70593085 Msa0040440:intron 20.0%
!! AAGATAAAATAAAATGACGA+CGG + chr1_1:70593192-70593211 None:intergenic 20.0%
!!! TATCTTTATACAATTTTCGT+TGG - chr1_1:70593517-70593536 Msa0040440:CDS 20.0%
!! ACATTCATTGTTAATCTTAT+TGG + chr1_1:70594023-70594042 None:intergenic 20.0%
!!! TACATTTTCATTATTCTCTT+CGG + chr1_1:70594560-70594579 None:intergenic 20.0%
!!! TACATTTTCATTATTCTCTT+TGG + chr1_1:70594560-70594579 None:intergenic 20.0%
!! ATATGAATAATAATTCACCA+GGG - chr1_1:70595265-70595284 Msa0040440:CDS 20.0%
! TTCCATGGAAAATGAAAATA+CGG + chr1_1:70587972-70587991 Msa0040430:five_prime_UTR 25.0%
!!! AATGTTGCTTTATAAAACCA+TGG + chr1_1:70588070-70588089 Msa0040430:five_prime_UTR 25.0%
!!! ATTTCTGTTGACTTTGATTT+AGG - chr1_1:70588276-70588295 Msa0040440:CDS 25.0%
!!! TTTTTTTTTTGCGTTGGATT+AGG - chr1_1:70588306-70588325 Msa0040440:CDS 25.0%
!!! TTTGATTTTGATGAGTATGA+TGG - chr1_1:70588840-70588859 Msa0040440:CDS 25.0%
! ACTTTATTAGTTCGTAACAA+GGG - chr1_1:70590160-70590179 Msa0040440:intron 25.0%
! CAGAACATATATTTAGATTC+TGG - chr1_1:70590418-70590437 Msa0040440:intron 25.0%
!! TATTTTGCCATATATCTTAG+TGG - chr1_1:70590933-70590952 Msa0040440:intron 25.0%
! AATATGTCCACTAAGATATA+TGG + chr1_1:70590943-70590962 None:intergenic 25.0%
!! CATATTCAGAATTGGTATTT+TGG - chr1_1:70590957-70590976 Msa0040440:intron 25.0%
!! TATTCAGAATTGGTATTTTG+GGG - chr1_1:70590959-70590978 Msa0040440:intron 25.0%
! TCATGATCTTAAAAAACAGA+AGG + chr1_1:70591542-70591561 None:intergenic 25.0%
! AGTATACAGTCTATAAACTA+GGG + chr1_1:70591669-70591688 None:intergenic 25.0%
! AAGTATACAGTCTATAAACT+AGG + chr1_1:70591670-70591689 None:intergenic 25.0%
! ATAAAGAAAGAAATTCAGTC+AGG + chr1_1:70591799-70591818 None:intergenic 25.0%
! AAGAACTAGTAATCACATTA+TGG - chr1_1:70592070-70592089 Msa0040440:intron 25.0%
! GCTAATTTAAGTAGTTTCAA+AGG - chr1_1:70592220-70592239 Msa0040440:intron 25.0%
! AGACAGAATATAAAGCAATA+AGG + chr1_1:70592418-70592437 None:intergenic 25.0%
! AGGTAATACATAAAAGTTCT+AGG - chr1_1:70592552-70592571 Msa0040440:intron 25.0%
! TAGTACTTGTATATATTCTG+AGG - chr1_1:70592880-70592899 Msa0040440:intron 25.0%
!!! ATATCAAGAAAGTATTCATG+CGG + chr1_1:70593003-70593022 None:intergenic 25.0%
! AATAAACAGAAAACCCATAA+AGG + chr1_1:70593060-70593079 None:intergenic 25.0%
! TATCTTTCTGCTAAACTTTA+TGG - chr1_1:70593206-70593225 Msa0040440:CDS 25.0%
!! ATCCTTTTCCCTTTTATATA+CGG - chr1_1:70593255-70593274 Msa0040440:CDS 25.0%
!! TACATTTTCATCATTCTCTT+TGG + chr1_1:70594776-70594795 None:intergenic 25.0%
!! TACATTTTCATCATTCTCTT+TGG + chr1_1:70594776-70594795 None:intergenic 25.0%
! GATATGAATAATAATTCACC+AGG - chr1_1:70595264-70595283 Msa0040440:CDS 25.0%
! TTCATACCAAACTCTTTAAA+AGG + chr1_1:70595339-70595358 None:intergenic 25.0%
! AATAAAAATGTAGATGTCTC+TGG - chr1_1:70595432-70595451 Msa0040440:intron 25.0%
!! TACATTTTCAACATTCTCTT+TGG + chr1_1:70595637-70595656 None:intergenic 25.0%
ACACCAGTAATTCCTTAATT+CGG - chr1_1:70587922-70587941 Msa0040440:CDS 30.0%
!! TTTATTTTCCCTCCGAATTA+AGG + chr1_1:70587937-70587956 Msa0040430:five_prime_UTR 30.0%
!!! TTCGTTTTTTGTTTCTTCCA+TGG + chr1_1:70587987-70588006 Msa0040430:five_prime_UTR 30.0%
AAAACTAATCGGAGAAGAAA+TGG + chr1_1:70588239-70588258 Msa0040430:five_prime_UTR 30.0%
! GATCTGAAGCAAAAACTAAT+CGG + chr1_1:70588250-70588269 Msa0040430:five_prime_UTR 30.0%
!!! ATTAGTTTTTGCTTCAGATC+TGG - chr1_1:70588250-70588269 Msa0040440:CDS 30.0%
!! TTAGTTTTTGCTTCAGATCT+GGG - chr1_1:70588251-70588270 Msa0040440:CDS 30.0%
!! TACTGGTGATGAAATTTTTG+CGG - chr1_1:70588369-70588388 Msa0040440:CDS 30.0%
! GATGAAATTTTTGCGGAATT+AGG - chr1_1:70588376-70588395 Msa0040440:CDS 30.0%
!!! ATTAGGTTTTGTTTTGGTGT+TGG - chr1_1:70588393-70588412 Msa0040440:CDS 30.0%
!!! TTAGGTTTTGTTTTGGTGTT+GGG - chr1_1:70588394-70588413 Msa0040440:CDS 30.0%
AGTATGATTCGAAGAAAGTA+AGG - chr1_1:70588559-70588578 Msa0040440:CDS 30.0%
TTCGAAGAAAGTAAGGAAAA+AGG - chr1_1:70588566-70588585 Msa0040440:CDS 30.0%
CACTCAAACTATTACAAACT+CGG + chr1_1:70588677-70588696 Msa0040430:intron 30.0%
! GAAAAAAGCGTATTATGACA+GGG - chr1_1:70589010-70589029 Msa0040440:CDS 30.0%
ATAGTAGGATGAAGATGAAA+AGG - chr1_1:70589066-70589085 Msa0040440:CDS 30.0%
TAGTAGGATGAAGATGAAAA+GGG - chr1_1:70589067-70589086 Msa0040440:CDS 30.0%
TTAAACTTCTCCTTCAACAA+GGG + chr1_1:70589113-70589132 Msa0040430:three_prime_UTR 30.0%
TTTAAACTTCTCCTTCAACA+AGG + chr1_1:70589114-70589133 Msa0040430:three_prime_UTR 30.0%
ATGGTTAATAAGAAGAAGGT+GGG - chr1_1:70589182-70589201 Msa0040440:CDS 30.0%
TAGAAAGCAAACAGAGTTTA+AGG - chr1_1:70589240-70589259 Msa0040440:CDS 30.0%
AGAAAGCAAACAGAGTTTAA+GGG - chr1_1:70589241-70589260 Msa0040440:CDS 30.0%
!! TTTGTTTCTAAGTGTGATGA+AGG + chr1_1:70589302-70589321 Msa0040430:three_prime_UTR 30.0%
AAGAAAATCCTTGTCAAGTA+AGG - chr1_1:70589376-70589395 Msa0040440:CDS 30.0%
!!! TCAGAGGTTATCTTTTTTGA+AGG + chr1_1:70589485-70589504 None:intergenic 30.0%
AGAAACTACGAGAACAAATA+CGG - chr1_1:70589591-70589610 Msa0040440:CDS 30.0%
ATGCAGTTTACATTAATCCT+GGG - chr1_1:70589678-70589697 Msa0040440:CDS 30.0%
TCTTCAAAAGCAATTGATTG+AGG - chr1_1:70589739-70589758 Msa0040440:CDS 30.0%
GTCAATTAACAAGGAAAACT+CGG - chr1_1:70589822-70589841 Msa0040440:intron 30.0%
CACTTTATTAGTTCGTAACA+AGG - chr1_1:70590159-70590178 Msa0040440:intron 30.0%
TGATGACTTTGTTCCATATA+CGG - chr1_1:70590198-70590217 Msa0040440:intron 30.0%
!!! GTTCTTGTTGATAGTTGTTT+TGG - chr1_1:70590789-70590808 Msa0040440:intron 30.0%
TTCCAATAATGAGATTTGAC+CGG + chr1_1:70590825-70590844 None:intergenic 30.0%
! TTAGTGGACATATTCAGAAT+TGG - chr1_1:70590949-70590968 Msa0040440:intron 30.0%
CCAAAATGTCATTAAGCAAA+AGG + chr1_1:70590987-70591006 None:intergenic 30.0%
! CCTTTTGCTTAATGACATTT+TGG - chr1_1:70590984-70591003 Msa0040440:intron 30.0%
!! TGCTTAATGACATTTTGGAA+CGG - chr1_1:70590989-70591008 Msa0040440:intron 30.0%
ATTCCAGGTATAAAAACTAC+TGG + chr1_1:70591055-70591074 None:intergenic 30.0%
! AGTAGTTTTTATACCTGGAA+TGG - chr1_1:70591054-70591073 Msa0040440:intron 30.0%
ATGTTATTGATGCCTTAGTT+TGG - chr1_1:70591224-70591243 Msa0040440:intron 30.0%
! TGAGGATTATTTTCATTCTG+AGG - chr1_1:70591259-70591278 Msa0040440:intron 30.0%
CAAAATTTACAGGTGCAATT+TGG + chr1_1:70591333-70591352 None:intergenic 30.0%
! AATTGCACCTGTAAATTTTG+TGG - chr1_1:70591333-70591352 Msa0040440:intron 30.0%
ATGCCTCATGTTATATTCTT+TGG - chr1_1:70592121-70592140 Msa0040440:CDS 30.0%
ATGCCAAAGAATATAACATG+AGG + chr1_1:70592127-70592146 None:intergenic 30.0%
ACTGATGAATGCTAAAAACA+AGG - chr1_1:70592532-70592551 Msa0040440:intron 30.0%
!!! CTGGAATACGATTGTTTTTA+TGG + chr1_1:70592660-70592679 None:intergenic 30.0%
TCGTATTCCAGATAAAATCT+TGG - chr1_1:70592669-70592688 Msa0040440:intron 30.0%
CGTATTCCAGATAAAATCTT+GGG - chr1_1:70592670-70592689 Msa0040440:intron 30.0%
TCTCTTATGATGCAGAAAAT+GGG - chr1_1:70592703-70592722 Msa0040440:intron 30.0%
! TCGAACAGTGAGATTTTTAT+TGG - chr1_1:70592740-70592759 Msa0040440:intron 30.0%
! CGAACAGTGAGATTTTTATT+GGG - chr1_1:70592741-70592760 Msa0040440:intron 30.0%
ACATAAACAGTTACAAGGAT+GGG + chr1_1:70592774-70592793 None:intergenic 30.0%
TACATAAACAGTTACAAGGA+TGG + chr1_1:70592775-70592794 None:intergenic 30.0%
GACATACATAAACAGTTACA+AGG + chr1_1:70592779-70592798 None:intergenic 30.0%
ATAAAATAAAATGACGACGG+CGG + chr1_1:70593189-70593208 None:intergenic 30.0%
CCTAATCTCCGTATATAAAA+GGG + chr1_1:70593266-70593285 None:intergenic 30.0%
TCCTAATCTCCGTATATAAA+AGG + chr1_1:70593267-70593286 None:intergenic 30.0%
AAAGAAAAGGAAAGTTGTGA+AGG + chr1_1:70593483-70593502 None:intergenic 30.0%
CAGATAAAAGAGCAAAGAAA+AGG + chr1_1:70593496-70593515 None:intergenic 30.0%
CATAAAAAATGTACGCGAAA+GGG + chr1_1:70593549-70593568 None:intergenic 30.0%
TCATAAAAAATGTACGCGAA+AGG + chr1_1:70593550-70593569 None:intergenic 30.0%
TTATCTCAATCTCTACTTCT+TGG - chr1_1:70593583-70593602 Msa0040440:CDS 30.0%
! TTTCTGAACTTGTTCATACA+TGG - chr1_1:70593652-70593671 Msa0040440:CDS 30.0%
AATGAGGTCATTGAATATGT+TGG - chr1_1:70593722-70593741 Msa0040440:CDS 30.0%
GTTAATCTTATTGGCAAGAT+TGG + chr1_1:70594014-70594033 None:intergenic 30.0%
TCTCAAGATATAAGCAATCA+AGG - chr1_1:70594052-70594071 Msa0040440:CDS 30.0%
ATAAGCAATCAAGGTTTATC+TGG - chr1_1:70594061-70594080 Msa0040440:CDS 30.0%
!! CCATTTGTAGAAGTATCATT+TGG + chr1_1:70594253-70594272 None:intergenic 30.0%
CCAAATGATACTTCTACAAA+TGG - chr1_1:70594250-70594269 Msa0040440:CDS 30.0%
! ATTCATATCAGTGAAAGCAT+GGG + chr1_1:70594389-70594408 None:intergenic 30.0%
AATTCATATCAGTGAAAGCA+TGG + chr1_1:70594390-70594409 None:intergenic 30.0%
AATGAAAATGTAGATGTCTC+TGG - chr1_1:70594568-70594587 Msa0040440:CDS 30.0%
ATATGAATTGTGATTCACCA+GGG - chr1_1:70594401-70594420 Msa0040440:CDS 30.0%
GATGAAAATGTAGATGTATC+TGG - chr1_1:70594784-70594803 Msa0040440:CDS 30.0%
TTTGATATGAATGATTCCCT+TGG - chr1_1:70594916-70594935 Msa0040440:CDS 30.0%
AATGAAAATGTAGATGTCTC+TGG - chr1_1:70594568-70594587 Msa0040440:CDS 30.0%
TGAGTTACTGTTCATATCAA+TGG + chr1_1:70595478-70595497 None:intergenic 30.0%
CAGGTAAGATCTGATTTAAA+TGG - chr1_1:70595702-70595721 Msa0040440:five_prime_UTR 30.0%
AGGGAAAAAGAATTCACATT+TGG - chr1_1:70595740-70595759 Msa0040440:five_prime_UTR 30.0%
!! GAAATGCATTTTGATGAAAC+TGG - chr1_1:70595783-70595802 Msa0040440:five_prime_UTR 30.0%
!!! ATTTTGAGTTAGTGATGACG+TGG + chr1_1:70587870-70587889 Msa0040430:five_prime_UTR 35.0%
! TTAAGGAATTACTGGTGTTG+TGG + chr1_1:70587920-70587939 Msa0040430:five_prime_UTR 35.0%
CAGTAATTCCTTAATTCGGA+GGG - chr1_1:70587926-70587945 Msa0040440:CDS 35.0%
CATGGAAAATGAAAATACGG+TGG + chr1_1:70587969-70587988 Msa0040430:five_prime_UTR 35.0%
! CACCGTATTTTCATTTTCCA+TGG - chr1_1:70587967-70587986 Msa0040440:CDS 35.0%
! AAAAAAGAGAAAGTGCACCA+TGG - chr1_1:70588050-70588069 Msa0040440:CDS 35.0%
!! CTCATCGGTGTTTAATTTTC+CGG - chr1_1:70588179-70588198 Msa0040440:CDS 35.0%
!! TTTTGCGTTGGATTAGGTTT+TGG - chr1_1:70588312-70588331 Msa0040440:CDS 35.0%
TGCTTAATTGCGCTTAATTG+CGG - chr1_1:70588341-70588360 Msa0040440:CDS 35.0%
!!! TGCGGAATTAGGTTTTGTTT+TGG - chr1_1:70588387-70588406 Msa0040440:CDS 35.0%
TGTTTGATTGTCAGGAAGAA+GGG - chr1_1:70588486-70588505 Msa0040440:CDS 35.0%
GAAAGTAAGGAAAAAGGTGA+AGG - chr1_1:70588572-70588591 Msa0040440:CDS 35.0%
! TTTGATGAGTATGATGGAGT+AGG - chr1_1:70588846-70588865 Msa0040440:CDS 35.0%
! GTTGATAGGGAAATTGAATC+TGG - chr1_1:70588960-70588979 Msa0040440:CDS 35.0%
! GGAAAAAAGCGTATTATGAC+AGG - chr1_1:70589009-70589028 Msa0040440:CDS 35.0%
!!! ATTTTTTCCCTGAACCCTAA+TGG + chr1_1:70589147-70589166 Msa0040430:three_prime_UTR 35.0%
ATTAGGGTTCAGGGAAAAAA+TGG - chr1_1:70589146-70589165 Msa0040440:CDS 35.0%
!! GGGAAAAAATGGTGTTTTGA+AGG - chr1_1:70589157-70589176 Msa0040440:CDS 35.0%
!!! AAATGGTGTTTTGAAGGTGA+TGG - chr1_1:70589163-70589182 Msa0040440:CDS 35.0%
! GGTGATGGTTAATAAGAAGA+AGG - chr1_1:70589178-70589197 Msa0040440:CDS 35.0%
GATGGTTAATAAGAAGAAGG+TGG - chr1_1:70589181-70589200 Msa0040440:CDS 35.0%
TTAATAAGAAGAAGGTGGGT+GGG - chr1_1:70589186-70589205 Msa0040440:CDS 35.0%
AAACTCTGTTTGCTTTCTAC+TGG + chr1_1:70589239-70589258 Msa0040430:three_prime_UTR 35.0%
TTTCTAAGTGTGATGAAGGA+TGG + chr1_1:70589298-70589317 Msa0040430:three_prime_UTR 35.0%
AGAAACAGGGTTTACTTGTT+AGG - chr1_1:70589330-70589349 Msa0040440:CDS 35.0%
! GTTGTTATCTGTTTCTTCTC+TGG + chr1_1:70589356-70589375 None:intergenic 35.0%
CAATGACACATCAATGAATC+TGG - chr1_1:70589433-70589452 Msa0040440:CDS 35.0%
GAAACTACGAGAACAAATAC+GGG - chr1_1:70589592-70589611 Msa0040440:CDS 35.0%
GATGCAGTTTACATTAATCC+TGG - chr1_1:70589677-70589696 Msa0040440:CDS 35.0%
TGCAGTTTACATTAATCCTG+GGG - chr1_1:70589679-70589698 Msa0040440:CDS 35.0%
!!! TTGCTTTTGAAGAGCATCAT+AGG + chr1_1:70589732-70589751 None:intergenic 35.0%
ATGTGCTCAGTCAATTAACA+AGG - chr1_1:70589813-70589832 Msa0040440:intron 35.0%
AGATGAAGAAGAAGAAGCAA+AGG - chr1_1:70589867-70589886 Msa0040440:intron 35.0%
! AGGATTGATGACATTGATAG+CGG - chr1_1:70589887-70589906 Msa0040440:intron 35.0%
!! ACATTGATAGCGGAAAAGAA+CGG - chr1_1:70589897-70589916 Msa0040440:CDS 35.0%
! ACTTCCTTGTTGCTTGATAA+AGG + chr1_1:70589999-70590018 None:intergenic 35.0%
TTGACTGAAAATGCTGTTAC+CGG - chr1_1:70590037-70590056 Msa0040440:CDS 35.0%
!! TTCTACTTTTCCTTCCATGT+AGG + chr1_1:70590126-70590145 None:intergenic 35.0%
GGAAGGAAAAGTAGAAAACA+TGG - chr1_1:70590130-70590149 Msa0040440:intron 35.0%
GGAAAAGTAGAAAACATGGA+AGG - chr1_1:70590134-70590153 Msa0040440:intron 35.0%
GATGACTTTGTTCCATATAC+GGG - chr1_1:70590199-70590218 Msa0040440:intron 35.0%
TATATGTTCTGATATGGCTG+AGG + chr1_1:70590409-70590428 None:intergenic 35.0%
TGGGAAAAACAAGAGAATTC+TGG - chr1_1:70590472-70590491 Msa0040440:intron 35.0%
GGGAAAAACAAGAGAATTCT+GGG - chr1_1:70590473-70590492 Msa0040440:intron 35.0%
TTCCATTCAGTAGATGTTGA+TGG - chr1_1:70590505-70590524 Msa0040440:intron 35.0%
TACCATCAACATCTACTGAA+TGG + chr1_1:70590510-70590529 None:intergenic 35.0%
ATACCACAGGTATCATCATT+TGG + chr1_1:70590538-70590557 None:intergenic 35.0%
CAACTCTGATGAAATGTTGA+TGG + chr1_1:70590601-70590620 None:intergenic 35.0%
AACATTTCATCAGAGTTGCT+TGG - chr1_1:70590603-70590622 Msa0040440:CDS 35.0%
! AAAAAAAAAGCTTTGGTGGG+TGG - chr1_1:70590751-70590770 Msa0040440:intron 35.0%
! AAAAAAAAGCTTTGGTGGGT+GGG - chr1_1:70590752-70590771 Msa0040440:intron 35.0%
!!! CTTGTTGATAGTTGTTTTGG+TGG - chr1_1:70590792-70590811 Msa0040440:intron 35.0%
! TCACCAGTAGTTTTTATACC+TGG - chr1_1:70591049-70591068 Msa0040440:intron 35.0%
TTATACCTGGAATGGTATCA+TGG - chr1_1:70591062-70591081 Msa0040440:intron 35.0%
TGGATTTGTGGTTGATCAAT+AGG - chr1_1:70591082-70591101 Msa0040440:intron 35.0%
TTGAATGAGTCCTGTCATAT+AGG - chr1_1:70591155-70591174 Msa0040440:intron 35.0%
! TATTATAGTTTGTGGCACAC+TGG + chr1_1:70591187-70591206 None:intergenic 35.0%
CCAATTATGTTGCCAAACTA+AGG + chr1_1:70591239-70591258 None:intergenic 35.0%
! CCTTAGTTTGGCAACATAAT+TGG - chr1_1:70591236-70591255 Msa0040440:intron 35.0%
!!! TAAATTTTGTGGACTAGCCA+GGG - chr1_1:70591344-70591363 Msa0040440:intron 35.0%
AAACCAAAACGAACAGAATG+GGG + chr1_1:70591500-70591519 None:intergenic 35.0%
CAAACCAAAACGAACAGAAT+GGG + chr1_1:70591501-70591520 None:intergenic 35.0%
TCAAACCAAAACGAACAGAA+TGG + chr1_1:70591502-70591521 None:intergenic 35.0%
!! TTTGCAGCTTTTTCCACAAA+AGG + chr1_1:70591621-70591640 None:intergenic 35.0%
AGCTCTACAAAAGTTCACTT+TGG + chr1_1:70591772-70591791 None:intergenic 35.0%
! AGTGAACTTTTGTAGAGCTA+AGG - chr1_1:70591773-70591792 Msa0040440:CDS 35.0%
!! AGAACTTGAAGAAGTACCTT+GGG - chr1_1:70591836-70591855 Msa0040440:CDS 35.0%
TCGTAGAACAAACGATGATT+CGG - chr1_1:70591900-70591919 Msa0040440:intron 35.0%
!! TAAAAAGCATTCGTCCATCA+CGG + chr1_1:70591989-70592008 None:intergenic 35.0%
! GCTTTTTACCTGTTGTTGAT+AGG - chr1_1:70592001-70592020 Msa0040440:intron 35.0%
!! CAATGCAGCTATTTTGTCAT+AGG - chr1_1:70592444-70592463 Msa0040440:intron 35.0%
!!! TTGTTTTTATGGCTTCACAG+TGG + chr1_1:70592649-70592668 None:intergenic 35.0%
! AAGTCACCCAAGATTTTATC+TGG + chr1_1:70592679-70592698 None:intergenic 35.0%
CTCTCTTATGATGCAGAAAA+TGG - chr1_1:70592702-70592721 Msa0040440:intron 35.0%
CTCTTATGATGCAGAAAATG+GGG - chr1_1:70592704-70592723 Msa0040440:intron 35.0%
!! TTGTATATATTCTGAGGCTC+AGG - chr1_1:70592886-70592905 Msa0040440:intron 35.0%
TTTACAGGTCAAACTTCAGT+CGG - chr1_1:70593081-70593100 Msa0040440:CDS 35.0%
TTCAGTCGGTTGAATTATAC+TGG - chr1_1:70593095-70593114 Msa0040440:CDS 35.0%
! TGGCTTTTATACCGCTATTT+TGG - chr1_1:70593115-70593134 Msa0040440:CDS 35.0%
!! TTTATACCGCTATTTTGGAG+CGG - chr1_1:70593120-70593139 Msa0040440:CDS 35.0%
TAATTTCTGCAGCATCTATC+AGG - chr1_1:70593153-70593172 Msa0040440:CDS 35.0%
CTCCGTATATAAAAGGGAAA+AGG + chr1_1:70593260-70593279 None:intergenic 35.0%
! CCCTTTTATATACGGAGATT+AGG - chr1_1:70593263-70593282 Msa0040440:CDS 35.0%
ATGAGAGTAAACTTCCTTGT+TGG - chr1_1:70593332-70593351 Msa0040440:CDS 35.0%
CAGGATAATAATGACCAACA+AGG + chr1_1:70593349-70593368 None:intergenic 35.0%
GGTCATTATTATCCTGTCTT+AGG - chr1_1:70593353-70593372 Msa0040440:CDS 35.0%
TTCCCTGATTCCTATATATG+TGG + chr1_1:70593423-70593442 None:intergenic 35.0%
GTGAAGGTTTACAAGTTCAA+TGG + chr1_1:70593467-70593486 None:intergenic 35.0%
TGAACAAGTTCAGAAATTGC+AGG + chr1_1:70593648-70593667 None:intergenic 35.0%
! CATACATGGACAACAGTTTT+TGG - chr1_1:70593666-70593685 Msa0040440:CDS 35.0%
TCTGTAACATATCAATGCCA+GGG + chr1_1:70593752-70593771 None:intergenic 35.0%
TTCTGTAACATATCAATGCC+AGG + chr1_1:70593753-70593772 None:intergenic 35.0%
AAACTTGAGGGTAATACAAC+CGG - chr1_1:70593792-70593811 Msa0040440:CDS 35.0%
TAAATAATCAGCACCTTCAC+CGG + chr1_1:70593814-70593833 None:intergenic 35.0%
TCTTTCCTCAGAATGAGATT+TGG + chr1_1:70594101-70594120 None:intergenic 35.0%
TCTCCTTCTAATTCTAGTCA+TGG - chr1_1:70594151-70594170 Msa0040440:CDS 35.0%
CTCCTTCTAATTCTAGTCAT+GGG - chr1_1:70594152-70594171 Msa0040440:CDS 35.0%
TCCTTCTAATTCTAGTCATG+GGG - chr1_1:70594153-70594172 Msa0040440:CDS 35.0%
! GGTGAAATGAGTTGACATTT+GGG + chr1_1:70594232-70594251 None:intergenic 35.0%
! TGGTGAAATGAGTTGACATT+TGG + chr1_1:70594233-70594252 None:intergenic 35.0%
TTCTACAAATGGTCTTCCAT+CGG - chr1_1:70594261-70594280 Msa0040440:CDS 35.0%
! TTCATATCAGTGAAAGCATG+GGG + chr1_1:70594388-70594407 None:intergenic 35.0%
GATATGAATTGTGATTCACC+AGG - chr1_1:70594400-70594419 Msa0040440:CDS 35.0%
TCCTTTAGTGAATTCATCTC+AGG - chr1_1:70594525-70594544 Msa0040440:CDS 35.0%
GATATGAATTGTGATTCACC+AGG - chr1_1:70594400-70594419 Msa0040440:CDS 35.0%
AACTTCAACAACCTCAACAT+GGG + chr1_1:70594719-70594738 None:intergenic 35.0%
ATGTGAATTGTGATTCACCA+GGG - chr1_1:70594833-70594852 Msa0040440:CDS 35.0%
TCCTTTAGTGAATTCATCTC+AGG - chr1_1:70594525-70594544 Msa0040440:CDS 35.0%
GATGAAAATGTAGATGTCTC+TGG - chr1_1:70595216-70595235 Msa0040440:CDS 35.0%
!! GCTTTGCCTTTTAAAGAGTT+TGG - chr1_1:70595330-70595349 Msa0040440:five_prime_UTR 35.0%
AGTTCTGTTCTTAATCATGC+TGG - chr1_1:70595666-70595685 Msa0040440:five_prime_UTR 35.0%
TAAATCAGATCTTACCTGCA+AGG + chr1_1:70595700-70595719 None:intergenic 35.0%
AATGGTGAACTTGCATATGA+AGG - chr1_1:70595720-70595739 Msa0040440:five_prime_UTR 35.0%
ATGGTGAACTTGCATATGAA+GGG - chr1_1:70595721-70595740 Msa0040440:five_prime_UTR 35.0%
CCTCCGAATTAAGGAATTAC+TGG + chr1_1:70587928-70587947 Msa0040430:five_prime_UTR 40.0%
CCAGTAATTCCTTAATTCGG+AGG - chr1_1:70587925-70587944 Msa0040440:CDS 40.0%
GAAAGGGAGAGAAGAGAATT+GGG + chr1_1:70588099-70588118 Msa0040430:five_prime_UTR 40.0%
AGAAAGGGAGAGAAGAGAAT+TGG + chr1_1:70588100-70588119 Msa0040430:five_prime_UTR 40.0%
ACGCAAGTTAGAGAGAGAAA+GGG + chr1_1:70588115-70588134 Msa0040430:five_prime_UTR 40.0%
AACGCAAGTTAGAGAGAGAA+AGG + chr1_1:70588116-70588135 Msa0040430:five_prime_UTR 40.0%
GCTTAATTGCGGTTGATTAC+TGG - chr1_1:70588352-70588371 Msa0040440:CDS 40.0%
!!! TTGTTTTGGTGTTGGGTAGA+TGG - chr1_1:70588401-70588420 Msa0040440:CDS 40.0%
GGTGAAGAATAGAAGCTCTT+CGG - chr1_1:70588461-70588480 Msa0040440:CDS 40.0%
GTGAAGAATAGAAGCTCTTC+GGG - chr1_1:70588462-70588481 Msa0040440:CDS 40.0%
TGAAGAATAGAAGCTCTTCG+GGG - chr1_1:70588463-70588482 Msa0040440:CDS 40.0%
GTGTTTGATTGTCAGGAAGA+AGG - chr1_1:70588485-70588504 Msa0040440:CDS 40.0%
GTTTGATTGTCAGGAAGAAG+GGG - chr1_1:70588487-70588506 Msa0040440:CDS 40.0%
TTTGATTGTCAGGAAGAAGG+GGG - chr1_1:70588488-70588507 Msa0040440:CDS 40.0%
AGTAAGGAAAAAGGTGAAGG+TGG - chr1_1:70588575-70588594 Msa0040440:CDS 40.0%
TTACAAACTCGGATTGTCTC+CGG + chr1_1:70588666-70588685 Msa0040430:intron 40.0%
GAGGGAGAAGAAAGTTAAGT+TGG - chr1_1:70588812-70588831 Msa0040440:CDS 40.0%
! TGAGTATGATGGAGTAGGTA+AGG - chr1_1:70588851-70588870 Msa0040440:CDS 40.0%
! ATGATGGAGTAGGTAAGGAA+AGG - chr1_1:70588856-70588875 Msa0040440:CDS 40.0%
!! GAGGCAGTTTGATAATGACA+GGG - chr1_1:70588884-70588903 Msa0040440:CDS 40.0%
!! CAGTTTGATAATGACAGGGT+TGG - chr1_1:70588888-70588907 Msa0040440:CDS 40.0%
!! GATAATGACAGGGTTGGTTT+AGG - chr1_1:70588894-70588913 Msa0040440:CDS 40.0%
AGGATGAAGATGAAAAGGGA+TGG - chr1_1:70589071-70589090 Msa0040440:CDS 40.0%
TTAAACCTGACGAGTCCATT+AGG - chr1_1:70589129-70589148 Msa0040440:CDS 40.0%
TAAACCTGACGAGTCCATTA+GGG - chr1_1:70589130-70589149 Msa0040440:CDS 40.0%
GTTAATAAGAAGAAGGTGGG+TGG - chr1_1:70589185-70589204 Msa0040440:CDS 40.0%
AAACAGAGTTTAAGGGCTGA+GGG - chr1_1:70589248-70589267 Msa0040440:CDS 40.0%
AAGTGTGATGAAGGATGGAT+CGG + chr1_1:70589293-70589312 Msa0040430:three_prime_UTR 40.0%
AACAAAATCCGCTGAGAAAC+AGG - chr1_1:70589316-70589335 Msa0040440:CDS 40.0%
ACAAAATCCGCTGAGAAACA+GGG - chr1_1:70589317-70589336 Msa0040440:CDS 40.0%
! AAGTAAACCCTGTTTCTCAG+CGG + chr1_1:70589327-70589346 Msa0040430:three_prime_UTR 40.0%
TCAAGTAAGGAAGACAGCAA+GGG - chr1_1:70589389-70589408 Msa0040440:CDS 40.0%
! AGGAGTCTGTTCATTTTCAG+AGG + chr1_1:70589501-70589520 None:intergenic 40.0%
CTTCACTCGACTTTGTAGTT+GGG + chr1_1:70589538-70589557 None:intergenic 40.0%
CAACTACAAAGTCGAGTGAA+GGG - chr1_1:70589537-70589556 Msa0040440:CDS 40.0%
AGATGCTTCTGAATAAAGGC+TGG - chr1_1:70589615-70589634 Msa0040440:CDS 40.0%
AATAGTCTCTATTCCTCCGT+GGG + chr1_1:70589655-70589674 None:intergenic 40.0%
AAATAGTCTCTATTCCTCCG+TGG + chr1_1:70589656-70589675 None:intergenic 40.0%
GCAGTTTACATTAATCCTGG+GGG - chr1_1:70589680-70589699 Msa0040440:CDS 40.0%
AGCTTATTGGTCCATCATCA+AGG - chr1_1:70589706-70589725 Msa0040440:CDS 40.0%
AAAAGAAGAACTCTCCCCTT+TGG + chr1_1:70589777-70589796 None:intergenic 40.0%
AAGGAAAACTCGGAAGAAGA+TGG - chr1_1:70589832-70589851 Msa0040440:intron 40.0%
CGGCAGATTAAAAGAACTTC+TGG - chr1_1:70589917-70589936 Msa0040440:CDS 40.0%
AGCTCCTTTATCAAGCAACA+AGG - chr1_1:70589992-70590011 Msa0040440:CDS 40.0%
GTTTCTCAGTTGTAGCATTC+TGG + chr1_1:70590078-70590097 None:intergenic 40.0%
!! TGAGGGTCATTTTCAGAGAA+TGG + chr1_1:70590100-70590119 None:intergenic 40.0%
AGGAAGAAAGTAATGCTGGA+GGG - chr1_1:70590295-70590314 Msa0040440:CDS 40.0%
GATCCAAATGATGATACCTG+TGG - chr1_1:70590532-70590551 Msa0040440:intron 40.0%
GATGATACCTGTGGTATATG+TGG - chr1_1:70590541-70590560 Msa0040440:CDS 40.0%
GGAGATTTAATCTGCTGTGA+TGG - chr1_1:70590571-70590590 Msa0040440:CDS 40.0%
TCAGAGTTGCTTGGATATAC+AGG - chr1_1:70590612-70590631 Msa0040440:intron 40.0%
TTTGGGCATACTGCATGTTA+TGG - chr1_1:70590657-70590676 Msa0040440:intron 40.0%
! AAAAAAAGCTTTGGTGGGTG+GGG - chr1_1:70590753-70590772 Msa0040440:intron 40.0%
AGCCGGTCAAATCTCATTAT+TGG - chr1_1:70590820-70590839 Msa0040440:intron 40.0%
AAACCCGGCACTATTCTTTA+TGG - chr1_1:70590877-70590896 Msa0040440:intron 40.0%
AACCCGGCACTATTCTTTAT+GGG - chr1_1:70590878-70590897 Msa0040440:intron 40.0%
TGACCCATAAAGAATAGTGC+CGG + chr1_1:70590884-70590903 None:intergenic 40.0%
CAAATCCATGATACCATTCC+AGG + chr1_1:70591070-70591089 None:intergenic 40.0%
GGAATGGTATCATGGATTTG+TGG - chr1_1:70591070-70591089 Msa0040440:intron 40.0%
GTTTGGCAACATAATTGGTG+AGG - chr1_1:70591241-70591260 Msa0040440:intron 40.0%
! GGCTAGTCCACAAAATTTAC+AGG + chr1_1:70591343-70591362 None:intergenic 40.0%
!!! GTAAATTTTGTGGACTAGCC+AGG - chr1_1:70591343-70591362 Msa0040440:intron 40.0%
AAAGGAATGCTCTGACACAT+TGG + chr1_1:70591603-70591622 None:intergenic 40.0%
TTGTGGAAAAAGCTGCAAAG+AGG - chr1_1:70591622-70591641 Msa0040440:intron 40.0%
!! GAGAACTTGAAGAAGTACCT+TGG - chr1_1:70591835-70591854 Msa0040440:CDS 40.0%
AACTTGATGCAGGCTTTACA+TGG - chr1_1:70591869-70591888 Msa0040440:intron 40.0%
! CTGTTGTTGATAGGAGAAGT+GGG - chr1_1:70592010-70592029 Msa0040440:intron 40.0%
! TGTTGTTGATAGGAGAAGTG+GGG - chr1_1:70592011-70592030 Msa0040440:intron 40.0%
CTCATGTACCAAACAGTATG+TGG + chr1_1:70592101-70592120 None:intergenic 40.0%
!! AAAAGTTCTAGGATGCAGCA+AGG - chr1_1:70592563-70592582 Msa0040440:intron 40.0%
GCTATCCAATCTCTGCAAAT+CGG - chr1_1:70592585-70592604 Msa0040440:intron 40.0%
TTGACATATGGCTGTTCTGA+GGG + chr1_1:70592623-70592642 None:intergenic 40.0%
!!! TTATACCGCTATTTTGGAGC+GGG - chr1_1:70593121-70593140 Msa0040440:CDS 40.0%
TTATCCTGTCTTAGGTTCCA+TGG - chr1_1:70593361-70593380 Msa0040440:CDS 40.0%
TATCCTGTCTTAGGTTCCAT+GGG - chr1_1:70593362-70593381 Msa0040440:CDS 40.0%
TTAGCAGAGATGCCTTTCAT+TGG - chr1_1:70593391-70593410 Msa0040440:CDS 40.0%
TTGGAACTCGCCACATATAT+AGG - chr1_1:70593410-70593429 Msa0040440:CDS 40.0%
TCGCCACATATATAGGAATC+AGG - chr1_1:70593417-70593436 Msa0040440:CDS 40.0%
CGCCACATATATAGGAATCA+GGG - chr1_1:70593418-70593437 Msa0040440:CDS 40.0%
GTTCAATGGCAGAAAAAAGC+CGG + chr1_1:70593453-70593472 None:intergenic 40.0%
CTCAATCTCTACTTCTTGGA+AGG - chr1_1:70593587-70593606 Msa0040440:CDS 40.0%
!!! TTTTGGCTTCACACATCTTG+AGG - chr1_1:70593683-70593702 Msa0040440:CDS 40.0%
AACCACTTAGGCAAGAAATG+AGG - chr1_1:70593706-70593725 Msa0040440:CDS 40.0%
! TTGAATATGTTGGTGTTCCC+TGG - chr1_1:70593732-70593751 Msa0040440:CDS 40.0%
TCAAATTGCTCAGCATCTGT+TGG + chr1_1:70593893-70593912 None:intergenic 40.0%
GATGCTGAGCAATTTGAGAA+TGG - chr1_1:70593896-70593915 Msa0040440:CDS 40.0%
CAATTTGAGAATGGAGACGT+GGG - chr1_1:70593905-70593924 Msa0040440:CDS 40.0%
ACCCCATGACTAGAATTAGA+AGG + chr1_1:70594157-70594176 None:intergenic 40.0%
!! TTGGGTGATGGATCATTGAT+GGG + chr1_1:70594214-70594233 None:intergenic 40.0%
!! TTTGGGTGATGGATCATTGA+TGG + chr1_1:70594215-70594234 None:intergenic 40.0%
! ATGAGTTGACATTTGGGTGA+TGG + chr1_1:70594226-70594245 None:intergenic 40.0%
TAGTCATGAAATCCGAGCTT+TGG - chr1_1:70594294-70594313 Msa0040440:CDS 40.0%
AGTCATGAAATCCGAGCTTT+GGG - chr1_1:70594295-70594314 Msa0040440:CDS 40.0%
CCATGTTCTTTACAGTAGCT+AGG + chr1_1:70594342-70594361 None:intergenic 40.0%
CCTAGCTACTGTAAAGAACA+TGG - chr1_1:70594339-70594358 Msa0040440:CDS 40.0%
TCTTGACCAAAATCCTGTGT+CGG - chr1_1:70594423-70594442 Msa0040440:CDS 40.0%
TATGAATGATGCCCATGTTG+AGG - chr1_1:70594489-70594508 Msa0040440:CDS 40.0%
GCCTGAGATGAATTCACTAA+AGG + chr1_1:70594529-70594548 None:intergenic 40.0%
TATGAATGATGCCCATGTTG+AGG - chr1_1:70594489-70594508 Msa0040440:CDS 40.0%
CAACTTCAACAACCTCAACA+TGG + chr1_1:70594720-70594739 None:intergenic 40.0%
CATGTTGAGGTTGTTGAAGT+TGG - chr1_1:70594718-70594737 Msa0040440:CDS 40.0%
TCCTTTAGTGAATTCGTTCG+AGG - chr1_1:70594741-70594760 Msa0040440:CDS 40.0%
CCTTTAGTGAATTCGTTCGA+GGG - chr1_1:70594742-70594761 Msa0040440:CDS 40.0%
CTTTAGTGAATTCGTTCGAG+GGG - chr1_1:70594743-70594762 Msa0040440:CDS 40.0%
GATGTGAATTGTGATTCACC+AGG - chr1_1:70594832-70594851 Msa0040440:CDS 40.0%
GCCTGAGATGAATTCACTAA+AGG + chr1_1:70594529-70594548 None:intergenic 40.0%
GATATGAATTGTGATTCCCC+AGG - chr1_1:70595048-70595067 Msa0040440:CDS 40.0%
ACTTGACCAAAATCCTGTGT+CGG - chr1_1:70595071-70595090 Msa0040440:CDS 40.0%
TATGAATGATACCCATGTCG+AGG - chr1_1:70595137-70595156 Msa0040440:CDS 40.0%
AGATTCAAGAACCTCGACAT+GGG + chr1_1:70595151-70595170 None:intergenic 40.0%
GAGAATCCGTAACAGGATTT+CGG + chr1_1:70595296-70595315 None:intergenic 40.0%
TGTTACGGATTCTCAAGTGA+CGG - chr1_1:70595302-70595321 Msa0040440:five_prime_UTR 40.0%
TATGAATGATGTCCGTGATG+AGG - chr1_1:70595353-70595372 Msa0040440:five_prime_UTR 40.0%
GATATGAACAGTAACTCACC+AGG - chr1_1:70595480-70595499 Msa0040440:intron 40.0%
TATGAATGATACCCATGTCG+AGG - chr1_1:70595137-70595156 Msa0040440:CDS 40.0%
TCCTTTAGTGAATTTGCCTG+AGG - chr1_1:70595602-70595621 Msa0040440:five_prime_UTR 40.0%
CCTTTAGTGAATTTGCCTGA+GGG - chr1_1:70595603-70595622 Msa0040440:five_prime_UTR 40.0%
CTTTAGTGAATTTGCCTGAG+GGG - chr1_1:70595604-70595623 Msa0040440:five_prime_UTR 40.0%
!! GGAATTACTGGTGTTGTGGA+CGG + chr1_1:70587916-70587935 Msa0040430:five_prime_UTR 45.0%
CCGGCGAAAACAAAACTGAT+CGG + chr1_1:70588147-70588166 Msa0040430:five_prime_UTR 45.0%
!!! CCGATCAGTTTTGTTTTCGC+CGG - chr1_1:70588144-70588163 Msa0040440:CDS 45.0%
CGATGAGTGAATCAATTCGC+CGG + chr1_1:70588166-70588185 Msa0040430:five_prime_UTR 45.0%
! CGGCGAATTGATTCACTCAT+CGG - chr1_1:70588164-70588183 Msa0040440:CDS 45.0%
!! CGGTGTTTAATTTTCCGGTG+AGG - chr1_1:70588184-70588203 Msa0040440:CDS 45.0%
GATCGAGAATCTTACCTCAC+CGG + chr1_1:70588201-70588220 Msa0040430:five_prime_UTR 45.0%
! ACGAGAATTGGTAGTCCTTC+TGG - chr1_1:70588432-70588451 Msa0040440:CDS 45.0%
! CGAGAATTGGTAGTCCTTCT+GGG - chr1_1:70588433-70588452 Msa0040440:CDS 45.0%
! GAGAATTGGTAGTCCTTCTG+GGG - chr1_1:70588434-70588453 Msa0040440:CDS 45.0%
AAGGAAAAAGGTGAAGGTGG+AGG - chr1_1:70588578-70588597 Msa0040440:CDS 45.0%
TCGAGTGATTCAGAATCGAG+CGG - chr1_1:70588606-70588625 Msa0040440:CDS 45.0%
AGATTAGTAGGAAGAGGGAG+AGG - chr1_1:70588733-70588752 Msa0040440:CDS 45.0%
TAATGGGGATGGTATGGTTG+AGG - chr1_1:70588773-70588792 Msa0040440:CDS 45.0%
AATGGGGATGGTATGGTTGA+GGG - chr1_1:70588774-70588793 Msa0040440:CDS 45.0%
ATGGTATGGTTGAGGGGAAT+GGG - chr1_1:70588781-70588800 Msa0040440:CDS 45.0%
GAGTAGGTAAGGAAAGGATG+AGG - chr1_1:70588862-70588881 Msa0040440:CDS 45.0%
TAGGTAAGGAAAGGATGAGG+AGG - chr1_1:70588865-70588884 Msa0040440:CDS 45.0%
!! GGAGGCAGTTTGATAATGAC+AGG - chr1_1:70588883-70588902 Msa0040440:CDS 45.0%
!! AATGACAGGGTTGGTTTAGG+AGG - chr1_1:70588897-70588916 Msa0040440:CDS 45.0%
!! ATGACAGGGTTGGTTTAGGA+GGG - chr1_1:70588898-70588917 Msa0040440:CDS 45.0%
TTTAGGAGGGGGAAGGTTTA+TGG - chr1_1:70588911-70588930 Msa0040440:CDS 45.0%
TTAGGAGGGGGAAGGTTTAT+GGG - chr1_1:70588912-70588931 Msa0040440:CDS 45.0%
CCTATCAACACTACCTCTAG+CGG + chr1_1:70588949-70588968 Msa0040430:three_prime_UTR 45.0%
!! CGCTAGAGGTAGTGTTGATA+GGG - chr1_1:70588947-70588966 Msa0040440:CDS 45.0%
GCGTATTATGACAGGGCAAT+TGG - chr1_1:70589017-70589036 Msa0040440:CDS 45.0%
CAAACAGAGTTTAAGGGCTG+AGG - chr1_1:70589247-70589266 Msa0040440:CDS 45.0%
GCTGTCTTCCTTACTTGACA+AGG + chr1_1:70589387-70589406 None:intergenic 45.0%
GTCAAGTAAGGAAGACAGCA+AGG - chr1_1:70589388-70589407 Msa0040440:CDS 45.0%
TAAGGAAGACAGCAAGGGAA+AGG - chr1_1:70589394-70589413 Msa0040440:CDS 45.0%
GTTGGGAACTTGTCATGTAC+AGG + chr1_1:70589521-70589540 None:intergenic 45.0%
CCTTCACTCGACTTTGTAGT+TGG + chr1_1:70589539-70589558 None:intergenic 45.0%
CCAACTACAAAGTCGAGTGA+AGG - chr1_1:70589536-70589555 Msa0040440:CDS 45.0%
AGTCGAGTGAAGGGAAAATC+AGG - chr1_1:70589546-70589565 Msa0040440:CDS 45.0%
CGGGAGATGCTTCTGAATAA+AGG - chr1_1:70589611-70589630 Msa0040440:CDS 45.0%
AGCATCATAGGCCTTGATGA+TGG + chr1_1:70589720-70589739 None:intergenic 45.0%
ATTGATTGAGGATGAGCGAG+CGG - chr1_1:70589751-70589770 Msa0040440:CDS 45.0%
CTGAGCACATCATCAGCAAT+AGG + chr1_1:70589803-70589822 None:intergenic 45.0%
ACTGAAAATGCTGTTACCGG+TGG - chr1_1:70590040-70590059 Msa0040440:CDS 45.0%
AATGACCCTCAGAACCTACA+TGG - chr1_1:70590109-70590128 Msa0040440:intron 45.0%
! TCCTTCCATGTAGGTTCTGA+GGG + chr1_1:70590117-70590136 None:intergenic 45.0%
TTCCTTCCATGTAGGTTCTG+AGG + chr1_1:70590118-70590137 None:intergenic 45.0%
ACTGTTCGTTTGCCCGTATA+TGG + chr1_1:70590214-70590233 None:intergenic 45.0%
! TTTCCTGGTTGGTTGACTCA+GGG - chr1_1:70590236-70590255 Msa0040440:intron 45.0%
GGTAGTACAGGTAAGTCAGA+AGG - chr1_1:70590258-70590277 Msa0040440:CDS 45.0%
GCATTACTTTCTTCCTCCTG+CGG + chr1_1:70590291-70590310 None:intergenic 45.0%
CAGGAGGAAGAAAGTAATGC+TGG - chr1_1:70590291-70590310 Msa0040440:CDS 45.0%
GAGGAAGAAAGTAATGCTGG+AGG - chr1_1:70590294-70590313 Msa0040440:CDS 45.0%
AGAAAGTAATGCTGGAGGGA+TGG - chr1_1:70590299-70590318 Msa0040440:CDS 45.0%
!! ACAAGAGAAGGCATTCACTG+TGG - chr1_1:70590325-70590344 Msa0040440:intron 45.0%
!! GCTCGAACTTTGAAACTGTG+AGG + chr1_1:70590366-70590385 None:intergenic 45.0%
TCAAAGTTCGAGCTTCATGC+AGG - chr1_1:70590373-70590392 Msa0040440:intron 45.0%
! GTTTTTCCCACGCATCTATC+TGG + chr1_1:70590462-70590481 None:intergenic 45.0%
ACCTGTGGTATATGTGGAGA+TGG - chr1_1:70590547-70590566 Msa0040440:CDS 45.0%
TCCATCTCCACATATACCAC+AGG + chr1_1:70590551-70590570 None:intergenic 45.0%
TGTGGTATATGTGGAGATGG+AGG - chr1_1:70590550-70590569 Msa0040440:CDS 45.0%
!!! TTGTTTTGGTGGAAGAGAGC+CGG - chr1_1:70590803-70590822 Msa0040440:intron 45.0%
AACTTTGTTGCTCAGACAGC+TGG - chr1_1:70590844-70590863 Msa0040440:intron 45.0%
GACCCATAAAGAATAGTGCC+GGG + chr1_1:70590883-70590902 None:intergenic 45.0%
CTGGACACTACCTATATGAC+AGG + chr1_1:70591168-70591187 None:intergenic 45.0%
TTCTTTGTCAGTAGTTGCCC+TGG + chr1_1:70591364-70591383 None:intergenic 45.0%
CACATTGGAGTTGGCAAGAA+GGG + chr1_1:70591588-70591607 None:intergenic 45.0%
ACACATTGGAGTTGGCAAGA+AGG + chr1_1:70591589-70591608 None:intergenic 45.0%
ATGCTCTGACACATTGGAGT+TGG + chr1_1:70591597-70591616 None:intergenic 45.0%
!! GTGTCAGAGCATTCCTTTTG+TGG - chr1_1:70591605-70591624 Msa0040440:intron 45.0%
AGGGCACAAGAACATGCAAA+GGG + chr1_1:70591650-70591669 None:intergenic 45.0%
TAGGGCACAAGAACATGCAA+AGG + chr1_1:70591651-70591670 None:intergenic 45.0%
ACCAAGCATGAACTTGATGC+AGG - chr1_1:70591859-70591878 Msa0040440:CDS 45.0%
! ATGATTCGGAAGCAGCTAGT+AGG - chr1_1:70591914-70591933 Msa0040440:intron 45.0%
! TGATTCGGAAGCAGCTAGTA+GGG - chr1_1:70591915-70591934 Msa0040440:intron 45.0%
CCACTTCTCCTATCAACAAC+AGG + chr1_1:70592012-70592031 None:intergenic 45.0%
! CCTGTTGTTGATAGGAGAAG+TGG - chr1_1:70592009-70592028 Msa0040440:intron 45.0%
TGGCTGAACCACATACTGTT+TGG - chr1_1:70592090-70592109 Msa0040440:CDS 45.0%
! CCTATCCGATTTGCAGAGAT+TGG + chr1_1:70592593-70592612 None:intergenic 45.0%
CCAATCTCTGCAAATCGGAT+AGG - chr1_1:70592590-70592609 Msa0040440:intron 45.0%
! TGACATATGGCTGTTCTGAG+GGG + chr1_1:70592622-70592641 None:intergenic 45.0%
CTTGACATATGGCTGTTCTG+AGG + chr1_1:70592624-70592643 None:intergenic 45.0%
TCACAGTGGTGCTTGACATA+TGG + chr1_1:70592635-70592654 None:intergenic 45.0%
!!! TATACCGCTATTTTGGAGCG+GGG - chr1_1:70593122-70593141 Msa0040440:CDS 45.0%
!! TCCACTGAGTTGGTTAAGTG+AGG + chr1_1:70593236-70593255 None:intergenic 45.0%
TCTCTGCTAACTTAGTCCCA+TGG + chr1_1:70593381-70593400 None:intergenic 45.0%
ATGTGGCGAGTTCCAATGAA+AGG + chr1_1:70593406-70593425 None:intergenic 45.0%
GAAGGCTCTTTGCTCATTGA+AGG - chr1_1:70593605-70593624 Msa0040440:CDS 45.0%
CTCATTGAAGGTTGAGAAGC+TGG - chr1_1:70593617-70593636 Msa0040440:CDS 45.0%
CACATCTTGAGGAACCACTT+AGG - chr1_1:70593694-70593713 Msa0040440:CDS 45.0%
GACCTCATTTCTTGCCTAAG+TGG + chr1_1:70593711-70593730 None:intergenic 45.0%
AGCAGAGCAAGGAAAACTTG+AGG - chr1_1:70593779-70593798 Msa0040440:CDS 45.0%
GCAGAGCAAGGAAAACTTGA+GGG - chr1_1:70593780-70593799 Msa0040440:CDS 45.0%
GCAATTTGAGAATGGAGACG+TGG - chr1_1:70593904-70593923 Msa0040440:CDS 45.0%
ATTAAGCCTGCTGTGGTCAA+TGG - chr1_1:70593932-70593951 Msa0040440:CDS 45.0%
TTAAGCCTGCTGTGGTCAAT+GGG - chr1_1:70593933-70593952 Msa0040440:CDS 45.0%
TCCATGAGGATCTTGCAAAG+CGG + chr1_1:70593975-70593994 None:intergenic 45.0%
GTGCTCCAAATCTCATTCTG+AGG - chr1_1:70594093-70594112 Msa0040440:CDS 45.0%
TGACTATCTGAGTGATCCGA+TGG + chr1_1:70594280-70594299 None:intergenic 45.0%
ATGGTTGAACCTGCTTCTGA+GGG - chr1_1:70594358-70594377 Msa0040440:CDS 45.0%
!! ACAGGATTTTGGTCAAGACC+TGG + chr1_1:70594421-70594440 None:intergenic 45.0%
! GAGAATCCGACACAGGATTT+TGG + chr1_1:70594432-70594451 None:intergenic 45.0%
ACTACTTGAGAATCCGACAC+AGG + chr1_1:70594439-70594458 None:intergenic 45.0%
TGTGTCGGATTCTCAAGTAG+TGG - chr1_1:70594438-70594457 Msa0040440:CDS 45.0%
AGCTTCGAGAACCTCAACAT+GGG + chr1_1:70594503-70594522 None:intergenic 45.0%
ACATGTCATTATCCGCCACT+CGG + chr1_1:70594669-70594688 None:intergenic 45.0%
CCCTCGAACGAATTCACTAA+AGG + chr1_1:70594745-70594764 None:intergenic 45.0%
! GAGAGTCTGACACAGGATTT+TGG + chr1_1:70594864-70594883 None:intergenic 45.0%
TATGAATGATTCCCTTGGCG+AGG - chr1_1:70594921-70594940 Msa0040440:CDS 45.0%
!! AGGATTTTGGTCAAGTCCTG+GGG + chr1_1:70595067-70595086 None:intergenic 45.0%
!! CAGGATTTTGGTCAAGTCCT+GGG + chr1_1:70595068-70595087 None:intergenic 45.0%
!! ACAGGATTTTGGTCAAGTCC+TGG + chr1_1:70595069-70595088 None:intergenic 45.0%
! GAGAATCCGACACAGGATTT+TGG + chr1_1:70594432-70594451 None:intergenic 45.0%
CAGATTCAAGAACCTCGACA+TGG + chr1_1:70595152-70595171 None:intergenic 45.0%
CATGTCGAGGTTCTTGAATC+TGG - chr1_1:70595150-70595169 Msa0040440:CDS 45.0%
TCCTTTAGCGAATTTGTCCG+AGG - chr1_1:70595173-70595192 Msa0040440:CDS 45.0%
GCATGACCGAAATCCTGTTA+CGG - chr1_1:70595287-70595306 Msa0040440:exon 45.0%
GTCACTTGAGAATCCGTAAC+AGG + chr1_1:70595303-70595322 None:intergenic 45.0%
CCTCAGATGAACTCACTGAA+GGG + chr1_1:70595392-70595411 None:intergenic 45.0%
CCTTCAGTGAGTTCATCTGA+GGG - chr1_1:70595390-70595409 Msa0040440:intron 45.0%
CTTCAGTGAGTTCATCTGAG+GGG - chr1_1:70595391-70595410 Msa0040440:intron 45.0%
AGGTCTTGACCAAAATCCTG+CGG - chr1_1:70594420-70594439 Msa0040440:CDS 45.0%
AGCTTCAAGAACCTCGACAT+GGG + chr1_1:70595580-70595599 None:intergenic 45.0%
CCCTCAGGCAAATTCACTAA+AGG + chr1_1:70595606-70595625 None:intergenic 45.0%
GAAACTGGCGTAAATCCTTC+CGG - chr1_1:70595798-70595817 Msa0040440:five_prime_UTR 45.0%
!! GAGACTGACCAAGCATTGAA+TGG - chr1_1:70595831-70595850 Msa0040440:five_prime_UTR 45.0%
!! ATATTATTAAATACATTTAA+TGG - chr1_1:70592957-70592976 Msa0040440:intron 5.0%
!! TATTATTAAATACATTTAAT+GGG - chr1_1:70592958-70592977 Msa0040440:intron 5.0%
!! ATTACTGGTGTTGTGGACGG+TGG + chr1_1:70587913-70587932 Msa0040430:five_prime_UTR 50.0%
! TGGTGTTGGGTAGATGGAAC+CGG - chr1_1:70588407-70588426 Msa0040440:CDS 50.0%
ATGGAACCGGGAACGAGAAT+TGG - chr1_1:70588420-70588439 Msa0040440:CDS 50.0%
GGACTACCAATTCTCGTTCC+CGG + chr1_1:70588429-70588448 Msa0040430:five_prime_UTR 50.0%
TTCTTCACCACAACCCCAGA+AGG + chr1_1:70588450-70588469 Msa0040430:five_prime_UTR 50.0%
! CTTCGGGGTGTTTGATTGTC+AGG - chr1_1:70588478-70588497 Msa0040440:CDS 50.0%
AGGAAGAAGGGGGATGCTTT+GGG - chr1_1:70588498-70588517 Msa0040440:CDS 50.0%
CGAGTGATTCAGAATCGAGC+GGG - chr1_1:70588607-70588626 Msa0040440:CDS 50.0%
GAGTGATTCAGAATCGAGCG+GGG - chr1_1:70588608-70588627 Msa0040440:CDS 50.0%
AGTTAGTGATGCCGTCTGGT+AGG - chr1_1:70588631-70588650 Msa0040440:CDS 50.0%
AGTTTGAGTGCTCTTGAGCG+AGG - chr1_1:70588687-70588706 Msa0040440:CDS 50.0%
CGGGGAGATTAGTAGGAAGA+GGG - chr1_1:70588728-70588747 Msa0040440:CDS 50.0%
TAGTAGGAAGAGGGAGAGGA+TGG - chr1_1:70588737-70588756 Msa0040440:CDS 50.0%
ATGGAGCAGATTCGGCGTAA+TGG - chr1_1:70588756-70588775 Msa0040440:CDS 50.0%
TGGAGCAGATTCGGCGTAAT+GGG - chr1_1:70588757-70588776 Msa0040440:CDS 50.0%
ATGGGGATGGTATGGTTGAG+GGG - chr1_1:70588775-70588794 Msa0040440:CDS 50.0%
GATGGTATGGTTGAGGGGAA+TGG - chr1_1:70588780-70588799 Msa0040440:CDS 50.0%
TATGGTTGAGGGGAATGGGT+TGG - chr1_1:70588785-70588804 Msa0040440:CDS 50.0%
!! TGACAGGGTTGGTTTAGGAG+GGG - chr1_1:70588899-70588918 Msa0040440:CDS 50.0%
!! CCGCTAGAGGTAGTGTTGAT+AGG - chr1_1:70588946-70588965 Msa0040440:CDS 50.0%
TGGTTCAAGCAGACACACTG+TGG - chr1_1:70588980-70588999 Msa0040440:CDS 50.0%
GCAGACACACTGTGGATAAG+AGG - chr1_1:70588988-70589007 Msa0040440:CDS 50.0%
ACTATGTTCACCGCCATCTC+CGG + chr1_1:70589051-70589070 Msa0040430:three_prime_UTR 50.0%
! GAGATGGCGGTGAACATAGT+AGG - chr1_1:70589051-70589070 Msa0040440:CDS 50.0%
TTCTCCTTCAACAAGGGCAG+AGG + chr1_1:70589107-70589126 Msa0040430:three_prime_UTR 50.0%
!! TGAACCCTAATGGACTCGTC+AGG + chr1_1:70589137-70589156 Msa0040430:three_prime_UTR 50.0%
TGACGAGTCCATTAGGGTTC+AGG - chr1_1:70589136-70589155 Msa0040440:CDS 50.0%
GACGAGTCCATTAGGGTTCA+GGG - chr1_1:70589137-70589156 Msa0040440:CDS 50.0%
AGTGAAGGGAAAATCAGGCG+AGG - chr1_1:70589551-70589570 Msa0040440:CDS 50.0%
ATCCTGGGGGAACAGCTTAT+TGG - chr1_1:70589693-70589712 Msa0040440:CDS 50.0%
!!! CTGGCTTTTAGAGCTACCAC+CGG + chr1_1:70590059-70590078 None:intergenic 50.0%
ACCCTCAGAACCTACATGGA+AGG - chr1_1:70590113-70590132 Msa0040440:intron 50.0%
GCAAACGAACAGTGCTTTCC+TGG - chr1_1:70590221-70590240 Msa0040440:intron 50.0%
ACGAACAGTGCTTTCCTGGT+TGG - chr1_1:70590225-70590244 Msa0040440:intron 50.0%
! CTTTCCTGGTTGGTTGACTC+AGG - chr1_1:70590235-70590254 Msa0040440:intron 50.0%
! TTCCTGGTTGGTTGACTCAG+GGG - chr1_1:70590237-70590256 Msa0040440:intron 50.0%
GAGGGATGGATCACAAGAGA+AGG - chr1_1:70590313-70590332 Msa0040440:CDS 50.0%
TACAGTGCCAGATAGATGCG+TGG - chr1_1:70590452-70590471 Msa0040440:intron 50.0%
ACAGTGCCAGATAGATGCGT+GGG - chr1_1:70590453-70590472 Msa0040440:intron 50.0%
!! TTGGTGGGTGGGGCTTTATT+AGG - chr1_1:70590763-70590782 Msa0040440:intron 50.0%
TTTGTTGCTCAGACAGCTGG+AGG - chr1_1:70590847-70590866 Msa0040440:intron 50.0%
! CTGCCCCATTCTGTTCGTTT+TGG - chr1_1:70591494-70591513 Msa0040440:intron 50.0%
AGATCATGACCGCTGCACTA+AGG - chr1_1:70591553-70591572 Msa0040440:intron 50.0%
CAAGTTCATGCTTGGTCCCA+AGG + chr1_1:70591855-70591874 None:intergenic 50.0%
GCCTGCATCAAGTTCATGCT+TGG + chr1_1:70591863-70591882 None:intergenic 50.0%
GATTCGGAAGCAGCTAGTAG+GGG - chr1_1:70591916-70591935 Msa0040440:intron 50.0%
AAGCCTAATGCTGAAGCTCG+TGG + chr1_1:70592326-70592345 None:intergenic 50.0%
!! GACATATGGCTGTTCTGAGG+GGG + chr1_1:70592621-70592640 None:intergenic 50.0%
ATCACCCCGCTCCAAAATAG+CGG + chr1_1:70593129-70593148 None:intergenic 50.0%
GCCTCACTTAACCAACTCAG+TGG - chr1_1:70593232-70593251 Msa0040440:CDS 50.0%
GGGAAAAGGATCCACTGAGT+TGG + chr1_1:70593246-70593265 None:intergenic 50.0%
AGTCCCATGGAACCTAAGAC+AGG + chr1_1:70593368-70593387 None:intergenic 50.0%
CAATGGCAGAAAAAAGCCGG+CGG + chr1_1:70593450-70593469 None:intergenic 50.0%
CAGAAGCTTCTAGCAGAGCA+AGG - chr1_1:70593768-70593787 Msa0040440:CDS 50.0%
GAGGGTAATACAACCGGTGA+AGG - chr1_1:70593798-70593817 Msa0040440:CDS 50.0%
GGGTTCTATTAAGCCTGCTG+TGG - chr1_1:70593925-70593944 Msa0040440:CDS 50.0%
TCTAACCCATTGACCACAGC+AGG + chr1_1:70593941-70593960 None:intergenic 50.0%
CCATGAGGATCTTGCAAAGC+GGG + chr1_1:70593974-70593993 None:intergenic 50.0%
GCAAGATCCTCATGGAAGTG+AGG - chr1_1:70593979-70593998 Msa0040440:CDS 50.0%
CTAGCATCCTCACTTCCATG+AGG + chr1_1:70593989-70594008 None:intergenic 50.0%
CAGTTGCTTGACCCAAAGCT+CGG + chr1_1:70594309-70594328 None:intergenic 50.0%
CATGGTTGAACCTGCTTCTG+AGG - chr1_1:70594357-70594376 Msa0040440:CDS 50.0%
TGGTTGAACCTGCTTCTGAG+GGG - chr1_1:70594359-70594378 Msa0040440:CDS 50.0%
CAGCTTCGAGAACCTCAACA+TGG + chr1_1:70594504-70594523 None:intergenic 50.0%
CATGTTGAGGTTCTCGAAGC+TGG - chr1_1:70594502-70594521 Msa0040440:CDS 50.0%
GCTAGACCAAAATCCCGTGT+CGG - chr1_1:70594639-70594658 Msa0040440:CDS 50.0%
CATGTCATTATCCGCCACTC+GGG + chr1_1:70594668-70594687 None:intergenic 50.0%
!! ACAGGATTTTGGTCAAGCCC+TGG + chr1_1:70594853-70594872 None:intergenic 50.0%
TCCTGTGTCAGACTCTCAAG+TGG - chr1_1:70594867-70594886 Msa0040440:CDS 50.0%
ACCACTTGAGAGTCTGACAC+AGG + chr1_1:70594871-70594890 None:intergenic 50.0%
TGTGTCAGACTCTCAAGTGG+TGG - chr1_1:70594870-70594889 Msa0040440:CDS 50.0%
AGCTTCAAGAACCTCGCCAA+GGG + chr1_1:70594935-70594954 None:intergenic 50.0%
TCCTGTGTCGGATTCTCAAG+TGG - chr1_1:70594435-70594454 Msa0040440:CDS 50.0%
TGTGTCGGATTCTCAAGTGG+CGG - chr1_1:70595086-70595105 Msa0040440:CDS 50.0%
GCCTCGGACAAATTCGCTAA+AGG + chr1_1:70595177-70595196 None:intergenic 50.0%
CTCTTTGGCATTGTTCGCCT+CGG + chr1_1:70595193-70595212 None:intergenic 50.0%
CGGCTTCTACAACCTCATCA+CGG + chr1_1:70595368-70595387 None:intergenic 50.0%
CGTGATGAGGTTGTAGAAGC+CGG - chr1_1:70595366-70595385 Msa0040440:five_prime_UTR 50.0%
AGATGAACTCACTGAAGGGC+CGG + chr1_1:70595388-70595407 None:intergenic 50.0%
CCCTTCAGTGAGTTCATCTG+AGG - chr1_1:70595389-70595408 Msa0040440:intron 50.0%
CCCTCAGATGAACTCACTGA+AGG + chr1_1:70595393-70595412 None:intergenic 50.0%
!! GCAGGATTTTGGTCAAGACC+TGG + chr1_1:70595501-70595520 None:intergenic 50.0%
TCTTGACCAAAATCCTGCGG+TGG - chr1_1:70595503-70595522 Msa0040440:intron 50.0%
! GAGAATCCACCGCAGGATTT+TGG + chr1_1:70595512-70595531 None:intergenic 50.0%
CAGCTTCAAGAACCTCGACA+TGG + chr1_1:70595581-70595600 None:intergenic 50.0%
CATGTCGAGGTTCTTGAAGC+TGG - chr1_1:70595579-70595598 Msa0040440:five_prime_UTR 50.0%
TCTTTGGCATTGTTCCCCTC+AGG + chr1_1:70594760-70594779 None:intergenic 50.0%
GTCAGTCTCAGCACTATCAC+CGG + chr1_1:70595820-70595839 None:intergenic 50.0%
! GGTGTTGGGTAGATGGAACC+GGG - chr1_1:70588408-70588427 Msa0040440:CDS 55.0%
!! TGGTAGTCCTTCTGGGGTTG+TGG - chr1_1:70588440-70588459 Msa0040440:CDS 55.0%
CAGGAAGAAGGGGGATGCTT+TGG - chr1_1:70588497-70588516 Msa0040440:CDS 55.0%
! AAGAAGGGGGATGCTTTGGG+TGG - chr1_1:70588501-70588520 Msa0040440:CDS 55.0%
! GATGCTTTGGGTGGTGGTGT+TGG - chr1_1:70588510-70588529 Msa0040440:CDS 55.0%
TAGTGATGCCGTCTGGTAGG+AGG - chr1_1:70588634-70588653 Msa0040440:CDS 55.0%
TTGAGTGCTCTTGAGCGAGG+TGG - chr1_1:70588690-70588709 Msa0040440:CDS 55.0%
! GAGCGAGGTGGTGGTAATGT+TGG - chr1_1:70588702-70588721 Msa0040440:CDS 55.0%
! CGAGGTGGTGGTAATGTTGG+TGG - chr1_1:70588705-70588724 Msa0040440:CDS 55.0%
! GGTGGTGGTAATGTTGGTGG+CGG - chr1_1:70588708-70588727 Msa0040440:CDS 55.0%
!! GTGGTGGTAATGTTGGTGGC+GGG - chr1_1:70588709-70588728 Msa0040440:CDS 55.0%
!! TGGTGGTAATGTTGGTGGCG+GGG - chr1_1:70588710-70588729 Msa0040440:CDS 55.0%
!! TTGGTGGCGGGGAGATTAGT+AGG - chr1_1:70588721-70588740 Msa0040440:CDS 55.0%
GCGGGGAGATTAGTAGGAAG+AGG - chr1_1:70588727-70588746 Msa0040440:CDS 55.0%
GGGAGAGGATGGAGCAGATT+CGG - chr1_1:70588748-70588767 Msa0040440:CDS 55.0%
GGAGCAGATTCGGCGTAATG+GGG - chr1_1:70588758-70588777 Msa0040440:CDS 55.0%
! CAGATTCGGCGTAATGGGGA+TGG - chr1_1:70588762-70588781 Msa0040440:CDS 55.0%
! TCGGCGTAATGGGGATGGTA+TGG - chr1_1:70588767-70588786 Msa0040440:CDS 55.0%
!! TTGAGGGGAATGGGTTGGAG+AGG - chr1_1:70588790-70588809 Msa0040440:CDS 55.0%
!! GACAGGGTTGGTTTAGGAGG+GGG - chr1_1:70588900-70588919 Msa0040440:CDS 55.0%
!! AGGGCAATTGGCTTGCATCC+CGG - chr1_1:70589029-70589048 Msa0040440:CDS 55.0%
!! ATTGGCTTGCATCCCGGAGA+TGG - chr1_1:70589035-70589054 Msa0040440:CDS 55.0%
CTATGTTCACCGCCATCTCC+GGG + chr1_1:70589050-70589069 Msa0040430:three_prime_UTR 55.0%
TCCTTCAACAAGGGCAGAGG+AGG + chr1_1:70589104-70589123 Msa0040430:three_prime_UTR 55.0%
AGACAGCAAGGGAAAGGAGC+AGG - chr1_1:70589400-70589419 Msa0040440:CDS 55.0%
GGGAAAGGAGCAGGATTCAG+AGG - chr1_1:70589409-70589428 Msa0040440:CDS 55.0%
GGGAAAATCAGGCGAGGTAG+TGG - chr1_1:70589557-70589576 Msa0040440:CDS 55.0%
GGACCATAGACTATCGCCCA+CGG - chr1_1:70589636-70589655 Msa0040440:CDS 55.0%
GACCAATAAGCTGTTCCCCC+AGG + chr1_1:70589698-70589717 None:intergenic 55.0%
TACCCCTGAGTCAACCAACC+AGG + chr1_1:70590242-70590261 None:intergenic 55.0%
! GGTTGACTCAGGGGTAGTAC+AGG - chr1_1:70590246-70590265 Msa0040440:CDS 55.0%
GTCAGAAGGTTCAGTACCGC+AGG - chr1_1:70590272-70590291 Msa0040440:CDS 55.0%
AGAAGGTTCAGTACCGCAGG+AGG - chr1_1:70590275-70590294 Msa0040440:CDS 55.0%
TGTTGCAGATGCTCCCTCCT+GGG - chr1_1:70591295-70591314 Msa0040440:intron 55.0%
TTTGGACAACGCCATTCCCC+AGG + chr1_1:70591315-70591334 None:intergenic 55.0%
TGACCGCTGCACTAAGGACA+TGG - chr1_1:70591559-70591578 Msa0040440:intron 55.0%
GACCGCTGCACTAAGGACAT+GGG - chr1_1:70591560-70591579 Msa0040440:intron 55.0%
CACCCATGTCCTTAGTGCAG+CGG + chr1_1:70591565-70591584 None:intergenic 55.0%
TAGTAGGGGAGTCACCCAGA+GGG - chr1_1:70591930-70591949 Msa0040440:intron 55.0%
CTGCCACGAGCTTCAGCATT+AGG - chr1_1:70592320-70592339 Msa0040440:CDS 55.0%
CCCGCTTTGCAAGATCCTCA+TGG - chr1_1:70593971-70593990 Msa0040440:CDS 55.0%
!! ACGGGATTTTGGTCTAGCCC+TGG + chr1_1:70594637-70594656 None:intergenic 55.0%
! GGGAATCCGACACGGGATTT+TGG + chr1_1:70594648-70594667 None:intergenic 55.0%
CAGCTTCAAGAACCTCGCCA+AGG + chr1_1:70594936-70594955 None:intergenic 55.0%
CTTGGCGAGGTTCTTGAAGC+TGG - chr1_1:70594934-70594953 Msa0040440:CDS 55.0%
GCCACTTGAGAATCCGACAC+AGG + chr1_1:70595087-70595106 None:intergenic 55.0%
ACAGGATTTCGGTCATGCCC+TGG + chr1_1:70595285-70595304 None:intergenic 55.0%
! TCCTGCGGTGGATTCTCAAG+TGG - chr1_1:70595515-70595534 Msa0040440:five_prime_UTR 55.0%
! TGCGGTGGATTCTCAAGTGG+CGG - chr1_1:70595518-70595537 Msa0040440:five_prime_UTR 55.0%
TGCTGGTGAGAGTTCCTTGC+AGG - chr1_1:70595683-70595702 Msa0040440:five_prime_UTR 55.0%
GTCTCAGCACTATCACCGGA+AGG + chr1_1:70595816-70595835 None:intergenic 55.0%
! GGTGTTGTGGACGGTGGAGA+TGG + chr1_1:70587907-70587926 Msa0040430:five_prime_UTR 60.0%
! AAGGGGGATGCTTTGGGTGG+TGG - chr1_1:70588504-70588523 Msa0040440:CDS 60.0%
! GCTTTGGGTGGTGGTGTTGG+TGG - chr1_1:70588513-70588532 Msa0040440:CDS 60.0%
!! TTGGGTGGTGGTGTTGGTGG+TGG - chr1_1:70588516-70588535 Msa0040440:CDS 60.0%
!! GTGGTGGTGGTTCGAGTTCG+CGG - chr1_1:70588532-70588551 Msa0040440:CDS 60.0%
GGGGAGTTAGTGATGCCGTC+TGG - chr1_1:70588627-70588646 Msa0040440:CDS 60.0%
ATGCCGTCTGGTAGGAGGCT+TGG - chr1_1:70588639-70588658 Msa0040440:CDS 60.0%
TGCCGTCTGGTAGGAGGCTT+GGG - chr1_1:70588640-70588659 Msa0040440:CDS 60.0%
AGTGCTCTTGAGCGAGGTGG+TGG - chr1_1:70588693-70588712 Msa0040440:CDS 60.0%
!! AGGGGAATGGGTTGGAGAGG+AGG - chr1_1:70588793-70588812 Msa0040440:CDS 60.0%
!! GGGGAATGGGTTGGAGAGGA+GGG - chr1_1:70588794-70588813 Msa0040440:CDS 60.0%
!! GGGTTGGTTTAGGAGGGGGA+AGG - chr1_1:70588904-70588923 Msa0040440:CDS 60.0%
GGAACAATGCACGCCGCTAG+AGG - chr1_1:70588933-70588952 Msa0040440:CDS 60.0%
GCCTCCTCTGCCCTTGTTGA+AGG - chr1_1:70589100-70589119 Msa0040440:CDS 60.0%
!! GGGCTGAGGGCACTTCTAAG+AGG - chr1_1:70589261-70589280 Msa0040440:CDS 60.0%
CCTCCGTGGGCGATAGTCTA+TGG + chr1_1:70589642-70589661 None:intergenic 60.0%
CCATAGACTATCGCCCACGG+AGG - chr1_1:70589639-70589658 Msa0040440:CDS 60.0%
AGGATGAGCGAGCGGCCAAA+GGG - chr1_1:70589759-70589778 Msa0040440:CDS 60.0%
! GCTGGAGGAGCGTGAAAACC+CGG - chr1_1:70590862-70590881 Msa0040440:intron 60.0%
CTGTTGCAGATGCTCCCTCC+TGG - chr1_1:70591294-70591313 Msa0040440:intron 60.0%
GTTGCAGATGCTCCCTCCTG+GGG - chr1_1:70591296-70591315 Msa0040440:intron 60.0%
AGATGCTCCCTCCTGGGGAA+TGG - chr1_1:70591301-70591320 Msa0040440:intron 60.0%
GACAACGCCATTCCCCAGGA+GGG + chr1_1:70591311-70591330 None:intergenic 60.0%
CTAGTAGGGGAGTCACCCAG+AGG - chr1_1:70591929-70591948 Msa0040440:intron 60.0%
GGAGTTGCACTCCACCCTCT+GGG + chr1_1:70591947-70591966 None:intergenic 60.0%
TGGAGTTGCACTCCACCCTC+TGG + chr1_1:70591948-70591967 None:intergenic 60.0%
GGTGGAGTGCAACTCCAAGC+TGG - chr1_1:70591951-70591970 Msa0040440:intron 60.0%
GGTCAGTGCAACAGCCAGCT+TGG + chr1_1:70591968-70591987 None:intergenic 60.0%
! GGCTGTTGCACTGACCGTGA+TGG - chr1_1:70591972-70591991 Msa0040440:intron 60.0%
GGAATCAGGGAATGTGCCGC+CGG - chr1_1:70593431-70593450 Msa0040440:CDS 60.0%
TGGGGTTTCCCCTCAGAAGC+AGG + chr1_1:70594370-70594389 None:intergenic 60.0%
GCCACTTGAGAATCCACCGC+AGG + chr1_1:70595519-70595538 None:intergenic 60.0%
!! GGTGGTGGTGTTGGTGGTGG+TGG - chr1_1:70588519-70588538 Msa0040440:CDS 65.0%
GGCCCAAGCCTCCTACCAGA+CGG + chr1_1:70588645-70588664 Msa0040430:intron 65.0%
GTCTGGTAGGAGGCTTGGGC+CGG - chr1_1:70588644-70588663 Msa0040440:CDS 65.0%
GGCTTGCATCCCGGAGATGG+CGG - chr1_1:70589038-70589057 Msa0040440:CDS 65.0%
GAGGATGAGCGAGCGGCCAA+AGG - chr1_1:70589758-70589777 Msa0040440:CDS 65.0%
GGATGAGCGAGCGGCCAAAG+GGG - chr1_1:70589760-70589779 Msa0040440:CDS 65.0%
GGACAACGCCATTCCCCAGG+AGG + chr1_1:70591312-70591331 None:intergenic 65.0%
TAGGGGAGTCACCCAGAGGG+TGG - chr1_1:70591933-70591952 Msa0040440:intron 65.0%
TCCCGTGTCGGATTCCCGAG+TGG - chr1_1:70594651-70594670 Msa0040440:CDS 65.0%
GCCACTCGGGAATCCGACAC+GGG + chr1_1:70594655-70594674 None:intergenic 65.0%
CGCCACTCGGGAATCCGACA+CGG + chr1_1:70594656-70594675 None:intergenic 65.0%
CGTGTCGGATTCCCGAGTGG+CGG - chr1_1:70594654-70594673 Msa0040440:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 70587857 70595857 70587857 ID=Msa0040440;Name=Msa0040440
chr1_1 mRNA 70587857 70595857 70587857 ID=Msa0040440-mRNA-1;Parent=Msa0040440;Name=Msa0040440-mRNA-1;_AED=0.02;_eAED=0.02;_QI=441|1|0.88|1|0.87|0.77|9|0|1677
chr1_1 exon 70587857 70589817 70587857 ID=Msa0040440-mRNA-1:exon:23290;Parent=Msa0040440-mRNA-1
chr1_1 exon 70589895 70590105 70589895 ID=Msa0040440-mRNA-1:exon:23289;Parent=Msa0040440-mRNA-1
chr1_1 exon 70590240 70590339 70590240 ID=Msa0040440-mRNA-1:exon:23288;Parent=Msa0040440-mRNA-1
chr1_1 exon 70590540 70590626 70590540 ID=Msa0040440-mRNA-1:exon:23287;Parent=Msa0040440-mRNA-1
chr1_1 exon 70591647 70591885 70591647 ID=Msa0040440-mRNA-1:exon:23286;Parent=Msa0040440-mRNA-1
chr1_1 exon 70592071 70592159 70592071 ID=Msa0040440-mRNA-1:exon:23285;Parent=Msa0040440-mRNA-1
chr1_1 exon 70592279 70592411 70592279 ID=Msa0040440-mRNA-1:exon:23284;Parent=Msa0040440-mRNA-1
chr1_1 exon 70593081 70595386 70593081 ID=Msa0040440-mRNA-1:exon:23283;Parent=Msa0040440-mRNA-1
chr1_1 exon 70595509 70595857 70595509 ID=Msa0040440-mRNA-1:exon:23282;Parent=Msa0040440-mRNA-1
chr1_1 five_prime_UTR 70595509 70595857 70595509 ID=Msa0040440-mRNA-1:five_prime_utr;Parent=Msa0040440-mRNA-1
chr1_1 five_prime_UTR 70595295 70595386 70595295 ID=Msa0040440-mRNA-1:five_prime_utr;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70593081 70595294 70593081 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70592279 70592411 70592279 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70592071 70592159 70592071 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70591647 70591885 70591647 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70590540 70590626 70590540 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70590240 70590339 70590240 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70589895 70590105 70589895 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
chr1_1 CDS 70587857 70589817 70587857 ID=Msa0040440-mRNA-1:cds;Parent=Msa0040440-mRNA-1
Gene Sequence

>Msa0040440

ATGGAACCGGGAACGAGAATTGGTAGTCCTTCTGGGGTTGTGGTGAAGAATAGAAGCTCTTCGGGGTGTTTGATTGTCAGGAAGAAGGGGGATGCTTTGGGTGGTGGTGTTGGTGGTGGTGGTTCGAGTTCGCGGAAGCAGTATGATTCGAAGAAAGTAAGGAAAAAGGTGAAGGTGGAGGTTGATTCGAGTGATTCAGAATCGAGCGGGGAGTTAGTGATGCCGTCTGGTAGGAGGCTTGGGCCGGAGACAATCCGAGTTTGTAATAGTTTGAGTGCTCTTGAGCGAGGTGGTGGTAATGTTGGTGGCGGGGAGATTAGTAGGAAGAGGGAGAGGATGGAGCAGATTCGGCGTAATGGGGATGGTATGGTTGAGGGGAATGGGTTGGAGAGGAGGGAGAAGAAAGTTAAGTTGGATGTGTTTGATTTTGATGAGTATGATGGAGTAGGTAAGGAAAGGATGAGGAGGCAGTTTGATAATGACAGGGTTGGTTTAGGAGGGGGAAGGTTTATGGGAACAATGCACGCCGCTAGAGGTAGTGTTGATAGGGAAATTGAATCTGGTTCAAGCAGACACACTGTGGATAAGAGGAAAAAAGCGTATTATGACAGGGCAATTGGCTTGCATCCCGGAGATGGCGGTGAACATAGTAGGATGAAGATGAAAAGGGATGGAACTCAGCCTCCTCTGCCCTTGTTGAAGGAGAAGTTTAAACCTGACGAGTCCATTAGGGTTCAGGGAAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGAAGGTGGGTGGGTCAGTAGAACGCTATGAACAACGTAAACCAGTAGAAAGCAAACAGAGTTTAAGGGCTGAGGGCACTTCTAAGAGGAGTGTTCCGATCCATCCTTCATCACACTTAGAAACAAAATCCGCTGAGAAACAGGGTTTACTTGTTAGGCCAGAGAAGAAACAGATAACAACAAGAAAATCCTTGTCAAGTAAGGAAGACAGCAAGGGAAAGGAGCAGGATTCAGAGGACAATGACACATCAATGAATCTGGAAGTAAAAAATATTAAAGCTCACACACCTTCAAAAAAGATAACCTCTGAAAATGAACAGACTCCTGTACATGACAAGTTCCCAACTACAAAGTCGAGTGAAGGGAAAATCAGGCGAGGTAGTGGCACAGAAAAGCAGAAACTACGAGAACAAATACGGGAGATGCTTCTGAATAAAGGCTGGACCATAGACTATCGCCCACGGAGGAATAGAGACTATTTAGATGCAGTTTACATTAATCCTGGGGGAACAGCTTATTGGTCCATCATCAAGGCCTATGATGCTCTTCAAAAGCAATTGATTGAGGATGAGCGAGCGGCCAAAGGGGAGAGTTCTTCTTTTGCTCCTATTGCTGATGATGTGCTCAGTCAATTAACAAGGAAAACTCGGAAGAAGATGGAGAAAGATTTGAAGATGAAGAAGAAGAAGCAAAGGATTGATGACATTGATAGCGGAAAAGAACGGCAGATTAAAAGAACTTCTGGCAAAAAGCATCACATGAATAGCATTGATAGTGATAGCAATGAAGACAAGTTAAGCTCCTTTATCAAGCAACAAGGAAGTAAATCGATGAAAGCTAAATTGACTGAAAATGCTGTTACCGGTGGTAGCTCTAAAAGCCAGAATGCTACAACTGAGAAACCATTCTCTGAAAATGACCCTCAGAACCTACATGGAAGGAAAAGTAGAAAACATGGAAGGTGCACTTTATTAGTTCGTAACAAGGGATTGAATTCAGAATCTGATGACTTTGTTCCATATACGGGCAAACGAACAGTGCTTTCCTGGTTGGTTGACTCAGGGGTAGTACAGGTAAGTCAGAAGGTTCAGTACCGCAGGAGGAAGAAAGTAATGCTGGAGGGATGGATCACAAGAGAAGGCATTCACTGTGGCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTCGAGCTTCATGCAGGAAGCAAATTGCCTCAGCCATATCAGAACATATATTTAGATTCTGGAGTTTCTCTTCTACAGTGCCAGATAGATGCGTGGGAAAAACAAGAGAATTCTGGGAAAATCAGTTTCCATTCAGTAGATGTTGATGGTAACGATCCAAATGATGATACCTGTGGTATATGTGGAGATGGAGGAGATTTAATCTGCTGTGATGGTTGTCCATCAACATTTCATCAGAGTTGCTTGGATATACAGATGCTCCCTCCTGGGGAATGGCGTTGTCCAAATTGCACCTGTAAATTTTGTGGACTAGCCAGGGCAACTACTGACAAAGAAGATGATGCAACTGTAAATGCTCTACGTACTTGTGACTTGTGCGAGAAAAAATATCATGACCGCTGCACTAAGGACATGGGTGCCCTTCTTGCCAACTCCAATGTGTCAGAGCATTCCTTTTGTGGAAAAAGCTGCAAAGAGCTTTTTGAGAACTTGAAGAAGTACCTTGGGACCAAGCATGAACTTGATGCAGGCTTTACATGGTGTCTTGTTCGTAGAACAAACGATGATTCGGAAGCAGCTAGTAGGGGAGTCACCCAGAGGGTGGAGTGCAACTCCAAGCTGGCTGTTGCACTGACCGTGATGGACGAATGCTTTTTACCTGTTGTTGATAGGAGAAGTGGGGTCAATTTAATCCATAATAGTTTATATAATAGCGGGTCAAACTTCAGTCGGTTGAATTATACTGGCTTTTATACCGCTATTTTGGAGCGGGGTGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAAGTTAGCAGAGATGCCTTTCATTGGAACTCGCCACATATATAGGAATCAGGGAATGTGCCGCCGGCTTTTTTCTGCCATTGAACTTGCTCTTTGCTCATTGAAGGTTGAGAAGCTGGTTATTCCTGCAATTTCTGAACTTGTTCATACATGGACAACAGTTTTTGGCTTCACACATCTTGAGGAACCACTTAGGCAAGAAATGAGGTCATTGAATATGTTGGTGTTCCCTGGCATTGATATGTTACAGAAGCTTCTAGCAGAGCAAGGAAAACTTGAGGGTAATACAACCGGTGAAGATGCTGAGCAATTTGAGAATGGAGACGTGGGTTCTATTAAGCCTGCTGTGGTCAATGGGTTAGATATCAATTCACCCGCTTTGCAAGATCCTCATGGAAGTGAGGATGCTAGCTCCAATCTTGCCAATAAGATTAACAATGAATGTAGTGATGCTTCTCAAGATATAAGCAATCAAGGTTTATCTGGCAGAACTGTGTGCTCCAAATCTCATTCTGAGGAAAGAATATCTGATTTTGTTTCAGAAAACTGTGCTTCTCCTTCTAATTCTAGTCATGGGGTACTCAAAAAGAAAATTAAAATATCGATGTCTTCTCCCATCAATGATCCATCACCCAAATGTCAACTCATTTCACCAAATGATACTTCTACAAATGGTCTTCCATCGGATCACTCAGATAGTCATGAAATCCGAGCTTTGGGTCAAGCAACTGCATGTTCTGACCTAGCTACTGTAAAGAACATGGTTGAACCTGCTTCTGAGGGGAAACCCCATGCTTTCACTGATATGAATTGTGATTCACCAGGTCTTGACCAAAATCCTGTGTCGGATTCTCAAGTAGTGGATAATGCTTTGTCTTTTAAAGAGTTTGATATGAATGATGCCCATGTTGAGGTTCTCGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCGAAGAGAATAATGAAAATGTAGATGTCTCTGGTTCTGTTCTGAATCATGCTATCACAGATATGAATTGTGATTCACCAGGGCTAGACCAAAATCCCGTGTCGGATTCCCGAGTGGCGGATAATGACATGTCTTTAAAAAAGTTTGATATGAATGATGCCCATGTTGAGGTTGTTGAAGTTGGTCCTTTAGTGAATTCGTTCGAGGGGAACAATGCCAAAGAGAATGATGAAAATGTAGATGTATCTGGTTCTGTTCTTAATCATGCTATCACTGATGTGAATTGTGATTCACCAGGGCTTGACCAAAATCCTGTGTCAGACTCTCAAGTGGTGGATAATGATTTGTCTTTAAAAAAGTTTGATATGAATGATTCCCTTGGCGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTCATCTCAGGCGAACAATACCAAAGAGAATAATGAAAATGTAGATGTCTCTGGTTCAGCTCTTAATCAAGATATCACTGATATGAATTGTGATTCCCCAGGACTTGACCAAAATCCTGTGTCGGATTCTCAAGTGGCGGATAATGCTTTGTCTTGTAAAGAATTTGATATGAATGATACCCATGTCGAGGTTCTTGAATCTGGTCCTTTAGCGAATTTGTCCGAGGCGAACAATGCCAAAGAGAATGATGAAAATGTAGATGTCTCTGGTTCAGTTCTCGATCACACTGAAAGTGATATGAATAATAATTCACCAGGGCATGACCGAAATCCTGTTACGGATTCTCAAGTGACGGATAATGCTTTGCCTTTTAAAGAGTTTGGTATGAATGATGTCCGTGATGAGGTTGTAGAAGCCGGCCCTTCAGTGAGTTCATCTGAGGGGAACAATACCAAAGAGAATAATAAAAATGTAGATGTCTCTGGTTCAGCTCTTAATCATGCTTCCATTGATATGAACAGTAACTCACCAGGTCTTGACCAAAATCCTGCGGTGGATTCTCAAGTGGCGGAAAGTGCGTCTTGTAAAGAGTTTGATATGAATGATACCCATGTCGAGGTTCTTGAAGCTGGTCCTTTAGTGAATTTGCCTGAGGGGAACAATGCCAAAGAGAATGTTGAAAATGTAGATGTCTCTAGTTCTGTTCTTAATCATGCTGGTGAGAGTTCCTTGCAGGTAAGATCTGATTTAAATGGTGAACTTGCATATGAAGGGAAAAAGAATTCACATTTGGACACACAAGTTGCTTCAAATGAAATGCATTTTGATGAAACTGGCGTAAATCCTTCCGGTGATAGTGCTGAGACTGACCAAGCATTGAATGGTTGA
Protein sequence

>Msa0040440

MEPGTRIGSPSGVVVKNRSSSGCLIVRKKGDALGGGVGGGGSSSRKQYDSKKVRKKVKVEVDSSDSESSGELVMPSGRRLGPETIRVCNSLSALERGGGNVGGGEISRKRERMEQIRRNGDGMVEGNGLERREKKVKLDVFDFDEYDGVGKERMRRQFDNDRVGLGGGRFMGTMHAARGSVDREIESGSSRHTVDKRKKAYYDRAIGLHPGDGGEHSRMKMKRDGTQPPLPLLKEKFKPDESIRVQGKNGVLKVMVNKKKVGGSVERYEQRKPVESKQSLRAEGTSKRSVPIHPSSHLETKSAEKQGLLVRPEKKQITTRKSLSSKEDSKGKEQDSEDNDTSMNLEVKNIKAHTPSKKITSENEQTPVHDKFPTTKSSEGKIRRGSGTEKQKLREQIREMLLNKGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLIEDERAAKGESSSFAPIADDVLSQLTRKTRKKMEKDLKMKKKKQRIDDIDSGKERQIKRTSGKKHHMNSIDSDSNEDKLSSFIKQQGSKSMKAKLTENAVTGGSSKSQNATTEKPFSENDPQNLHGRKSRKHGRCTLLVRNKGLNSESDDFVPYTGKRTVLSWLVDSGVVQVSQKVQYRRRKKVMLEGWITREGIHCGCCSKILTVSKFELHAGSKLPQPYQNIYLDSGVSLLQCQIDAWEKQENSGKISFHSVDVDGNDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQMLPPGEWRCPNCTCKFCGLARATTDKEDDATVNALRTCDLCEKKYHDRCTKDMGALLANSNVSEHSFCGKSCKELFENLKKYLGTKHELDAGFTWCLVRRTNDDSEAASRGVTQRVECNSKLAVALTVMDECFLPVVDRRSGVNLIHNSLYNSGSNFSRLNYTGFYTAILERGDEIISAASIRFHGTKLAEMPFIGTRHIYRNQGMCRRLFSAIELALCSLKVEKLVIPAISELVHTWTTVFGFTHLEEPLRQEMRSLNMLVFPGIDMLQKLLAEQGKLEGNTTGEDAEQFENGDVGSIKPAVVNGLDINSPALQDPHGSEDASSNLANKINNECSDASQDISNQGLSGRTVCSKSHSEERISDFVSENCASPSNSSHGVLKKKIKISMSSPINDPSPKCQLISPNDTSTNGLPSDHSDSHEIRALGQATACSDLATVKNMVEPASEGKPHAFTDMNCDSPGLDQNPVSDSQVVDNALSFKEFDMNDAHVEVLEAGPLVNSSQANNTEENNENVDVSGSVLNHAITDMNCDSPGLDQNPVSDSRVADNDMSLKKFDMNDAHVEVVEVGPLVNSFEGNNAKENDENVDVSGSVLNHAITDVNCDSPGLDQNPVSDSQVVDNDLSLKKFDMNDSLGEVLEAGPLVNSSQANNTKENNENVDVSGSALNQDITDMNCDSPGLDQNPVSDSQVADNALSCKEFDMNDTHVEVLESGPLANLSEANNAKENDENVDVSGSVLDHTESDMNNNSPGHDRNPVTDSQVTDNALPFKEFGMNDVRDEVVEAGPSVSSSEGNNTKENNKNVDVSGSALNHASIDMNSNSPGLDQNPAVDSQVAESASCKEFDMNDTHVEVLEAGPLVNLPEGNNAKENVENVDVSSSVLNHAGESSLQVRSDLNGELAYEGKKNSHLDTQVASNEMHFDETGVNPSGDSAETDQALNG*