AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0042940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0042940 MtrunA17_Chr1g0208681 99.225 645 5 0 1 645 1 645 0.0 1313
Msa0042940 MtrunA17_Chr1g0208651 99.383 162 1 0 711 872 1 162 6.01e-113 342
Msa0042940 MtrunA17_Chr1g0208671 100.000 52 0 0 645 696 9 60 1.59e-28 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0042940 AT1G15130.1 70.853 868 216 7 13 871 7 846 0.0 1165

Find 253 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCGAAATGCTGACTTAA+AGG 0.202325 1_1:+73878249 None:intergenic
AGGCGCTGTGTTGTTTAATT+TGG 0.218497 1_1:-73879138 Msa0042940:CDS
TATGGAGATGGAATGGTATA+AGG 0.221971 1_1:+73873008 None:intergenic
GTGTATTGGATCTTTGATTT+TGG 0.231432 1_1:+73873315 None:intergenic
TGCTGATGGACCTGAGGGGC+TGG 0.257385 1_1:+73873143 None:intergenic
CCTTGGTGAGGTGGAGGATA+TGG 0.279392 1_1:+73872990 None:intergenic
ATGGCTGATAATAAGGATTC+TGG 0.286917 1_1:+73873276 None:intergenic
GATAGACTTAATAGGTTTGC+AGG 0.290355 1_1:-73877457 Msa0042940:CDS
TGCTCAGATGGCTGATAATA+AGG 0.292820 1_1:+73873269 None:intergenic
GAAGTCAATTCGGCACTAAA+TGG 0.293420 1_1:-73877519 Msa0042940:CDS
GGACCTGAGGGGCTGGGTAC+GGG 0.294908 1_1:+73873150 None:intergenic
AAGCTGCGCTGCAGCGCCCC+TGG 0.308663 1_1:+73878071 None:intergenic
TTGACATAGAGCTTTGAAAT+AGG 0.321500 1_1:+73879280 None:intergenic
CAGTTGATGTTGGCGGGATT+TGG 0.322838 1_1:+73873174 None:intergenic
ATTTGTTGGATAGACTTAAT+AGG 0.323559 1_1:-73877465 Msa0042940:CDS
TAGTTCATTGTCACCTCTTC+CGG 0.326092 1_1:-73877950 Msa0042940:CDS
TCTCCTTGACAGCCCTTTCA+AGG 0.335066 1_1:+73878007 None:intergenic
TGATCAGGTTCAGATGAAAT+TGG 0.338621 1_1:+73879242 None:intergenic
TGATGCGATTAACAAGTTAG+AGG 0.344489 1_1:-73878046 Msa0042940:CDS
AGCAAAGTTTCGAGAAATAA+AGG 0.346589 1_1:-73873721 Msa0042940:CDS
GCTTAGGGAAATGGAATTGC+CGG 0.346856 1_1:-73877743 Msa0042940:CDS
AGTAGCTGGTTTGAGTTTCC+AGG 0.347102 1_1:-73873384 Msa0042940:CDS
TTGCTGGTGGCTGCTGCTGA+TGG 0.358866 1_1:+73873129 None:intergenic
TGGACCTGAGGGGCTGGGTA+CGG 0.361189 1_1:+73873149 None:intergenic
GCTGAAGCTTGTTATAGATA+TGG 0.364918 1_1:-73878183 Msa0042940:CDS
CCGGGTTAGGCTTAGGGAAA+TGG 0.370762 1_1:-73877752 Msa0042940:CDS
GAAGAAGTTTCTTTGTAAGA+AGG 0.373928 1_1:-73879629 Msa0042940:five_prime_UTR
AGCTAACCCGGGTTAGGCTT+AGG 0.381309 1_1:-73877759 Msa0042940:CDS
GACCTGAGGGGCTGGGTACG+GGG 0.381552 1_1:+73873151 None:intergenic
GGCAGCTTCAATCTGCTTGT+AGG 0.385967 1_1:+73873746 None:intergenic
CACTTTGACAAAGAATTTGT+TGG 0.388593 1_1:-73877479 Msa0042940:CDS
TGAATCTGCACTTCCAAGTC+TGG 0.393925 1_1:-73877243 Msa0042940:CDS
ATCAGAGTTGCAGCAGCTTA+AGG 0.399905 1_1:-73877623 Msa0042940:CDS
GAGCTATGTCTTCAGAAATA+TGG 0.403948 1_1:+73874581 None:intergenic
ATGGAGATGGAATGGTATAA+GGG 0.404473 1_1:+73873009 None:intergenic
ATGGCGGCGGCTGGCTCGTT+CGG 0.410148 1_1:-73879038 Msa0042940:CDS
GTTCTTGATTAACCCTCCTT+AGG 0.411673 1_1:+73877599 None:intergenic
GCTGATGGACCTGAGGGGCT+GGG 0.413002 1_1:+73873144 None:intergenic
CAAAATGAAGATGCTATTGT+AGG 0.417817 1_1:-73877197 Msa0042940:CDS
TATGGTCAACCCGCCTATCC+TGG 0.421853 1_1:-73873098 Msa0042940:CDS
TACCGTTGACGGCCGGCGGC+AGG 0.422690 1_1:-73879075 Msa0042940:CDS
GCGTTGGTTTGCATTGTCAT+TGG 0.425716 1_1:-73872804 Msa0042940:three_prime_UTR
CCACCAGCAAACCATGATTA+TGG 0.426694 1_1:-73873116 Msa0042940:CDS
TGAAATTGGAAATCGAGTTT+CGG 0.427429 1_1:+73879256 None:intergenic
ACGAGGATCTGTTTGTGTAT+TGG 0.427944 1_1:+73873301 None:intergenic
TGGAGGCTGTCCAGATCAGT+GGG 0.428193 1_1:-73877663 Msa0042940:CDS
TTAACGCACTCACCTTCGTT+TGG 0.433224 1_1:-73879217 Msa0042940:CDS
ACATCTTCTTTGAGATTTGT+CGG 0.433365 1_1:+73877685 None:intergenic
GCCGGATTCTATTCTTGCTC+TGG 0.435293 1_1:-73877725 Msa0042940:CDS
CTTCAATCATTTCCCTGCAC+TGG 0.439263 1_1:+73873420 None:intergenic
GCCGCTGTTTACAGTCAGAT+TGG 0.441959 1_1:-73879116 Msa0042940:CDS
GATGTTGGCGGGATTTGGTA+TGG 0.442768 1_1:+73873179 None:intergenic
CACTATCTCTTGAATAAATG+AGG 0.451091 1_1:-73872899 Msa0042940:three_prime_UTR
ATAATTGGCCTTGCCAGACT+TGG 0.451987 1_1:+73877230 None:intergenic
TGCCCCGTACCCAGCCCCTC+AGG 0.453551 1_1:-73873153 Msa0042940:CDS
ACCTCTTCCGGCCTTTGCTA+TGG 0.453935 1_1:-73877938 Msa0042940:CDS
TGGCTGATAATAAGGATTCT+GGG 0.454236 1_1:+73873277 None:intergenic
TGACCATAATCATGGTTTGC+TGG 0.456556 1_1:+73873113 None:intergenic
GCTCAATTTAGAAGTCAATT+CGG 0.456856 1_1:-73877529 Msa0042940:CDS
TTTGAAAACACTATTGCTAA+AGG 0.457567 1_1:-73878894 Msa0042940:CDS
GGCCATCCTTGATGCCCGTC+CGG 0.459237 1_1:-73877365 Msa0042940:intron
GCTGCTGCTGATGGACCTGA+GGG 0.461280 1_1:+73873138 None:intergenic
GGCTGCTGCTGATGGACCTG+AGG 0.462399 1_1:+73873137 None:intergenic
ATTGCGACGCGGCCATGATT+CGG 0.466040 1_1:+73879525 None:intergenic
TGCAGCAGCTTAAGGACCTA+AGG 0.466771 1_1:-73877615 Msa0042940:CDS
GTGAGTGCGTTAACGTGATC+AGG 0.468021 1_1:+73879227 None:intergenic
AGCAAGCTAGTGAGCTAACC+CGG 0.468456 1_1:-73877771 Msa0042940:CDS
ACAACTGTTGCTGCAAATCC+AGG 0.468549 1_1:-73874539 Msa0042940:intron
TCTCTCCAGGTACACTGAAA+TGG 0.469811 1_1:-73877830 Msa0042940:CDS
GACATCCACCGGTTCTTATG+AGG 0.473020 1_1:-73874635 Msa0042940:CDS
GTGTTTGTGCTAAGATCTCT+AGG 0.475009 1_1:-73878860 Msa0042940:CDS
GGATGAGCATATGAAGAAAC+TGG 0.475296 1_1:+73873242 None:intergenic
AGGTACACTGAAATGGTTGA+TGG 0.478284 1_1:-73877823 Msa0042940:CDS
CTAGTGAGCTAACCCGGGTT+AGG 0.478773 1_1:-73877765 Msa0042940:CDS
TACGGGGCAGTTGATGTTGG+CGG 0.479101 1_1:+73873167 None:intergenic
AAGAAGTTTCTTTGTAAGAA+GGG 0.479503 1_1:-73879628 Msa0042940:five_prime_UTR
GCTAACCCGGGTTAGGCTTA+GGG 0.479946 1_1:-73877758 Msa0042940:CDS
CAAAATATTCATCTTGAGAA+AGG 0.480906 1_1:-73879158 Msa0042940:CDS
CCATTTCCCTAAGCCTAACC+CGG 0.482160 1_1:+73877752 None:intergenic
ATAAAGGACAACATCAATGA+AGG 0.482564 1_1:-73873705 Msa0042940:CDS
GTGGGTGCATTATTGTAGTA+TGG 0.484429 1_1:+73873065 None:intergenic
GAGGCTGTCCAGATCAGTGG+GGG 0.485272 1_1:-73877661 Msa0042940:CDS
GGACCAGGTTGTTGCTGTTG+TGG 0.486196 1_1:+73873038 None:intergenic
GGAGGAGATTGCGCGGTTGA+AGG 0.487146 1_1:-73878130 Msa0042940:CDS
AGAAACTCTAGGAGCTCAAA+GGG 0.487332 1_1:-73876431 Msa0042940:CDS
AATGGAAGGCGATATAGTTA+CGG 0.492955 1_1:+73879420 None:intergenic
GAAACTGGTGGTTGCTCAGA+TGG 0.493158 1_1:+73873257 None:intergenic
GGCGGGATTTGGTATGGAGG+AGG 0.493396 1_1:+73873185 None:intergenic
GACCAGGTTGTTGCTGTTGT+GGG 0.495429 1_1:+73873039 None:intergenic
TCACGTCGTGCGGGGAGAGA+TGG 0.500429 1_1:+73879314 None:intergenic
ATGGATCGGAGTGACGTTCA+AGG 0.500497 1_1:+73879333 None:intergenic
AAAATTCTATGTTACCCTGC+AGG 0.501341 1_1:-73873679 Msa0042940:intron
TCTGCAACAACTCCTCGGTC+TGG 0.501989 1_1:+73877569 None:intergenic
GGGTACGGGGCAGTTGATGT+TGG 0.503115 1_1:+73873164 None:intergenic
ACGGGGCAGTTGATGTTGGC+GGG 0.505036 1_1:+73873168 None:intergenic
ACCGGTGGATGTCATCAACT+TGG 0.507976 1_1:+73874645 None:intergenic
CTTTGAAATAGGTTATGAAA+AGG 0.508463 1_1:+73879291 None:intergenic
TTCCTTCTGCAACAACTCCT+CGG 0.508593 1_1:+73877564 None:intergenic
ATCGGAATACCGTTGACGGC+CGG 0.508631 1_1:-73879082 Msa0042940:CDS
AGGCGGGTTGACCATAATCA+TGG 0.511295 1_1:+73873105 None:intergenic
GTGCTTCGCGTTCAGAGTAA+TGG 0.514270 1_1:+73879402 None:intergenic
AAACCTTGAAAGGGCTGTCA+AGG 0.516417 1_1:-73878010 Msa0042940:CDS
ATGAAAAGGTCACGTCGTGC+GGG 0.516431 1_1:+73879305 None:intergenic
GAGGAGATTGCGCGGTTGAA+GGG 0.516689 1_1:-73878129 Msa0042940:CDS
TGTTGCTGTTGTGGGTGTGT+GGG 0.517354 1_1:+73873047 None:intergenic
GGGTTTGAAGATCGTCTTCG+AGG 0.519135 1_1:+73879375 None:intergenic
TAGTATGGAGCACGCCATCC+AGG 0.521659 1_1:+73873080 None:intergenic
ACCATAGCAAAGGCCGGAAG+AGG 0.522018 1_1:+73877937 None:intergenic
AGAGCCTTGGCACTATTGTC+AGG 0.523748 1_1:+73877850 None:intergenic
GCTTCTATGAAAATCTCGGT+TGG 0.524244 1_1:-73878999 Msa0042940:CDS
ATCAACCATTTCAGTGTACC+TGG 0.525411 1_1:+73877825 None:intergenic
TTCTCAAGGTCTTGCCTGCA+GGG 0.525892 1_1:+73873665 None:intergenic
TTTGATCGGAATACCGTTGA+CGG 0.526382 1_1:-73879086 Msa0042940:CDS
TAGCATTCACCACCGAATCA+TGG 0.529209 1_1:-73879537 Msa0042940:exon
GAGGGTTAATCAAGAACTGC+TGG 0.529305 1_1:-73877593 Msa0042940:CDS
GATTTGTCCGTTGAGTGTGC+TGG 0.530150 1_1:-73878960 Msa0042940:CDS
TAGCCACCTTGGTGAGGTGG+AGG 0.530224 1_1:+73872984 None:intergenic
GTTGACTTGTACTTTGCGAA+GGG 0.530524 1_1:-73872734 Msa0042940:three_prime_UTR
TGACAAGGAACATCCAGTGC+AGG 0.530758 1_1:-73873433 Msa0042940:CDS
AACTCTGATTCCAAACCAGC+AGG 0.531825 1_1:+73877637 None:intergenic
TTGTTGCTGTTGTGGGTGTG+TGG 0.535545 1_1:+73873046 None:intergenic
ATTGCTAAAGGAAGTACTCC+TGG 0.536729 1_1:-73878882 Msa0042940:CDS
CTTAGTTTACTTCCTCGCTA+AGG 0.539512 1_1:-73879653 Msa0042940:five_prime_UTR
GTATCATATTTAGGTTGCGT+TGG 0.540323 1_1:-73872820 Msa0042940:three_prime_UTR
TTGTGCTAAGATCTCTAGGC+AGG 0.540495 1_1:-73878856 Msa0042940:intron
TGGAGGATATGGAGATGGAA+TGG 0.542063 1_1:+73873001 None:intergenic
AGGGTCTCTCAAACAAAGCT+TGG 0.543950 1_1:-73877177 Msa0042940:intron
AAAATGAAGATGCTATTGTA+GGG 0.545526 1_1:-73877196 Msa0042940:CDS
AGCCTGCCGCCGGCCGTCAA+CGG 0.547387 1_1:+73879073 None:intergenic
TCCAGAGCAAGAATAGAATC+CGG 0.548211 1_1:+73877724 None:intergenic
CCCAAGTTGATGACATCCAC+CGG 0.548404 1_1:-73874646 Msa0042940:CDS
AGGAAAACACTTTACCGGAC+GGG 0.548646 1_1:+73877351 None:intergenic
TATTAACAGAAACCTTGAAA+GGG 0.550117 1_1:-73878019 Msa0042940:CDS
ACTAGAGCTGCATGAGAAAG+AGG 0.550416 1_1:-73878160 Msa0042940:CDS
ATAGTGCCAAGGCTCTCTCC+AGG 0.550685 1_1:-73877843 Msa0042940:CDS
AATGTGTGTCGACGTGGCAG+TGG 0.551944 1_1:+73879593 None:intergenic
TAGTAGCCACCTTGGTGAGG+TGG 0.552279 1_1:+73872981 None:intergenic
GATGGTAATGAGTGAGGTGC+TGG 0.553139 1_1:-73877908 Msa0042940:CDS
TATTTCTCGAAACTTTGCTA+TGG 0.553406 1_1:+73873725 None:intergenic
AAGCATGAGAAGCCTGCCGC+CGG 0.554250 1_1:+73879063 None:intergenic
GCACGCCATCCAGGATAGGC+GGG 0.554437 1_1:+73873089 None:intergenic
AATTCGGCACTAAATGGACT+AGG 0.554633 1_1:-73877513 Msa0042940:CDS
GTTGGTGTTGCCTACGGCGG+AGG 0.554650 1_1:+73879499 None:intergenic
AGTGTACCTGGAGAGAGCCT+TGG 0.555977 1_1:+73877837 None:intergenic
TTTATTCAAGAGATAGTGAT+CGG 0.556453 1_1:+73872904 None:intergenic
TATGAAAAGGTCACGTCGTG+CGG 0.557027 1_1:+73879304 None:intergenic
GACCGAGGAGTTGTTGCAGA+AGG 0.557406 1_1:-73877566 Msa0042940:CDS
ACTTTACCGGACGGGCATCA+AGG 0.558347 1_1:+73877359 None:intergenic
TAGAGAACATGCAGCACTGA+TGG 0.558480 1_1:-73877386 Msa0042940:CDS
AGATTGGTTTAACATTTGAT+CGG 0.560559 1_1:-73879100 Msa0042940:CDS
ACTCTAGGAGCTCAAAGGGC+TGG 0.562822 1_1:-73876427 Msa0042940:CDS
GGCTTCACCATAGCAAAGGC+CGG 0.563145 1_1:+73877931 None:intergenic
GTCAGCATTTCGATAAGTCG+TGG 0.563826 1_1:-73878242 Msa0042940:CDS
CACCCACAACAGCAACAACC+TGG 0.564229 1_1:-73873041 Msa0042940:CDS
TGATGTGAATGGCCATATGA+TGG 0.564451 1_1:+73873215 None:intergenic
TAGAAACTCTAGGAGCTCAA+AGG 0.564812 1_1:-73876432 Msa0042940:CDS
ATATTAACAGAAACCTTGAA+AGG 0.565472 1_1:-73878020 Msa0042940:CDS
CAGAGGCAACTAGAAACTCT+AGG 0.565811 1_1:-73876442 Msa0042940:CDS
GTGGAGGCTGTCCAGATCAG+TGG 0.567088 1_1:-73877664 Msa0042940:CDS
AAGCAAGCTGCGGAGAGTGA+TGG 0.567590 1_1:-73877427 Msa0042940:CDS
TGGAGCACGCCATCCAGGAT+AGG 0.569832 1_1:+73873085 None:intergenic
AGAGGTGACAATGAACTAGC+AGG 0.570476 1_1:+73877955 None:intergenic
TGAGGTGGAGGATATGGAGA+TGG 0.570485 1_1:+73872996 None:intergenic
GATTCTATTCTTGCTCTGGA+AGG 0.571907 1_1:-73877721 Msa0042940:CDS
GACAAATCTCAAAGAAGATG+TGG 0.573340 1_1:-73877683 Msa0042940:CDS
GTAGGTTGGGCTGTATTATG+AGG 0.573813 1_1:-73878298 Msa0042940:intron
GTCAACCCGCCTATCCTGGA+TGG 0.573947 1_1:-73873094 Msa0042940:CDS
GAATGCTTCTATGAAAATCT+CGG 0.574119 1_1:-73879003 Msa0042940:CDS
GCTGCTTATAGTAGCCACCT+TGG 0.576790 1_1:+73872973 None:intergenic
CTTTGCTATGGTGAAGCCGA+TGG 0.577714 1_1:-73877926 Msa0042940:CDS
GGGATTTGGTATGGAGGAGG+AGG 0.579071 1_1:+73873188 None:intergenic
GCTTAGAGAGATGAAAAGAA+AGG 0.580569 1_1:-73876392 Msa0042940:intron
TACCGGACGGGCATCAAGGA+TGG 0.581555 1_1:+73877363 None:intergenic
TAACAACAACTACCCTTCAG+TGG 0.581587 1_1:-73873342 Msa0042940:CDS
GACAAGGAACATCCAGTGCA+GGG 0.583077 1_1:-73873432 Msa0042940:CDS
TAATAAGGATTCTGGGGACG+AGG 0.583084 1_1:+73873284 None:intergenic
AGCAGCTTAAGGACCTAAGG+AGG 0.584482 1_1:-73877612 Msa0042940:CDS
CGATATAGTTACGGAGGGGA+CGG 0.584698 1_1:+73879429 None:intergenic
TCGCAATCTTCCTCCGCCGT+AGG 0.585370 1_1:-73879509 Msa0042940:CDS
TGAAAAGGTCACGTCGTGCG+GGG 0.585586 1_1:+73879306 None:intergenic
TTATAGTAGCCACCTTGGTG+AGG 0.586278 1_1:+73872978 None:intergenic
AGCACGCCATCCAGGATAGG+CGG 0.587317 1_1:+73873088 None:intergenic
TAAAGGACAACATCAATGAA+GGG 0.587672 1_1:-73873704 Msa0042940:CDS
GATGTTCAGAGACAAGTAGC+TGG 0.589222 1_1:-73873398 Msa0042940:CDS
CATGATGTTGGTGTTGCCTA+CGG 0.589786 1_1:+73879493 None:intergenic
TGTTGACTTGTACTTTGCGA+AGG 0.590897 1_1:-73872735 Msa0042940:three_prime_UTR
ATCGGAGTGACGTTCAAGGT+CGG 0.592674 1_1:+73879337 None:intergenic
AGGCTGTCCAGATCAGTGGG+GGG 0.593791 1_1:-73877660 Msa0042940:CDS
GTGAATGGCCATATGATGGA+GGG 0.593813 1_1:+73873219 None:intergenic
CTGCACTTCCAAGTCTGGCA+AGG 0.596110 1_1:-73877238 Msa0042940:CDS
AACAACAACTACCCTTCAGT+GGG 0.597294 1_1:-73873341 Msa0042940:CDS
CCGGTGGATGTCATCAACTT+GGG 0.599670 1_1:+73874646 None:intergenic
GCTGTATTATGAGGAAGCAT+TGG 0.603565 1_1:-73878289 Msa0042940:CDS
GGCTGATAATAAGGATTCTG+GGG 0.603808 1_1:+73873278 None:intergenic
AGCACCTCACTCATTACCAT+CGG 0.605520 1_1:+73877910 None:intergenic
TCGTGCGGGGAGAGATGGAT+CGG 0.605643 1_1:+73879319 None:intergenic
AGACATAGCTCAGAATATTG+AGG 0.606092 1_1:-73874569 Msa0042940:CDS
GTTGGCGGGATTTGGTATGG+AGG 0.606170 1_1:+73873182 None:intergenic
TGAATGGCCATATGATGGAG+GGG 0.612785 1_1:+73873220 None:intergenic
AACGGACAAATCAAGAGTGG+TGG 0.615367 1_1:+73878971 None:intergenic
TAACATTCCAGCACACTCAA+CGG 0.616027 1_1:+73878953 None:intergenic
TTTGTCAAAGTGCTTGACTG+AGG 0.616383 1_1:+73877490 None:intergenic
GAGATCTTAGCACAAACACC+AGG 0.617958 1_1:+73878864 None:intergenic
GAGGAGGCTGATGATGTGAA+TGG 0.618079 1_1:+73873204 None:intergenic
CCATAATCATGGTTTGCTGG+TGG 0.618594 1_1:+73873116 None:intergenic
GAAACTTCTTCACCTTAGCG+AGG 0.620558 1_1:+73879641 None:intergenic
TTGACTTGTACTTTGCGAAG+GGG 0.621044 1_1:-73872733 Msa0042940:three_prime_UTR
GCGACGCGGCCATGATTCGG+TGG 0.622359 1_1:+73879528 None:intergenic
AAGATCCTCATAAGAACCGG+TGG 0.623391 1_1:+73874630 None:intergenic
TTCAATCTTGAAGATTACAA+AGG 0.623450 1_1:-73874035 Msa0042940:intron
GGAGGCTGTCCAGATCAGTG+GGG 0.626546 1_1:-73877662 Msa0042940:CDS
TGCTATTAGTGTGCTTACTG+AGG 0.629455 1_1:-73878106 Msa0042940:CDS
CATTTCCCTAAGCCTAACCC+GGG 0.630083 1_1:+73877753 None:intergenic
TGTTCCTGACAATAGTGCCA+AGG 0.630139 1_1:-73877854 Msa0042940:CDS
GGAGATGGAATGGTATAAGG+GGG 0.630359 1_1:+73873011 None:intergenic
TGGAGATGGAATGGTATAAG+GGG 0.631641 1_1:+73873010 None:intergenic
GAAGGCGATATAGTTACGGA+GGG 0.633914 1_1:+73879424 None:intergenic
GGTGAATGCTAACGTGTGCG+TGG 0.634900 1_1:+73879549 None:intergenic
GAATGGCCATATGATGGAGG+GGG 0.635886 1_1:+73873221 None:intergenic
GAAGATTGCGAGCATGATGT+TGG 0.638744 1_1:+73879481 None:intergenic
GGAATACCGTTGACGGCCGG+CGG 0.639902 1_1:-73879079 Msa0042940:CDS
CATCGGCTTCACCATAGCAA+AGG 0.644385 1_1:+73877927 None:intergenic
TGTGAATGGCCATATGATGG+AGG 0.646322 1_1:+73873218 None:intergenic
AAATCTCAAAGAAGATGTGG+AGG 0.649760 1_1:-73877680 Msa0042940:CDS
GCATGAGAAAGAGGAAATAG+CGG 0.650589 1_1:-73878151 Msa0042940:CDS
GGAAGGCGATATAGTTACGG+AGG 0.651109 1_1:+73879423 None:intergenic
TTAAGACGAAGAGCTAGATG+TGG 0.656376 1_1:+73872871 None:intergenic
TGATGGCATTATAAGAACAC+AGG 0.662835 1_1:-73877806 Msa0042940:CDS
GAGGGGACGGTAGAGATCTA+CGG 0.666966 1_1:+73879442 None:intergenic
TGAGAAAGAGGAAATAGCGG+AGG 0.669495 1_1:-73878148 Msa0042940:CDS
TTCGCGTTCAGAGTAATGGA+AGG 0.670586 1_1:+73879406 None:intergenic
AAGCTGCGGAGAGTGATGGT+AGG 0.672556 1_1:-73877423 Msa0042940:CDS
GCAGCTTAAGGACCTAAGGA+GGG 0.673631 1_1:-73877611 Msa0042940:CDS
CTCAACGGACAAATCAAGAG+TGG 0.673842 1_1:+73878968 None:intergenic
GAGATGGAATGGTATAAGGG+GGG 0.678993 1_1:+73873012 None:intergenic
GCAATGACTTTGTAATGACA+AGG 0.681951 1_1:-73873448 Msa0042940:CDS
AGTGACGTTCAAGGTCGGAA+CGG 0.683747 1_1:+73879342 None:intergenic
AGAACTGCTGGTCCAGACCG+AGG 0.686561 1_1:-73877581 Msa0042940:CDS
CCATATCCTCCACCTCACCA+AGG 0.688432 1_1:-73872990 Msa0042940:CDS
GAAGGGAATGTGTGTCGACG+TGG 0.691605 1_1:+73879587 None:intergenic
CTGCTGCTGATGGACCTGAG+GGG 0.697684 1_1:+73873139 None:intergenic
AGGTAACTTGAAGCAAGCTG+CGG 0.698377 1_1:-73877437 Msa0042940:CDS
GCAAGCTAGTGAGCTAACCC+GGG 0.699373 1_1:-73877770 Msa0042940:CDS
GATGTTGGTGTTGCCTACGG+CGG 0.708829 1_1:+73879496 None:intergenic
GAACGCATCAAACCAAACGA+AGG 0.708844 1_1:+73879205 None:intergenic
ACCAATCTGACTGTAAACAG+CGG 0.718921 1_1:+73879115 None:intergenic
TATCCTCCACCTCACCAAGG+TGG 0.719566 1_1:-73872987 Msa0042940:CDS
AAATAGCGGAGGAGATTGCG+CGG 0.726143 1_1:-73878137 Msa0042940:CDS
GGTGACAATGAACTAGCAGG+AGG 0.736115 1_1:+73877958 None:intergenic
GAAGCCGATGGTAATGAGTG+AGG 0.738917 1_1:-73877914 Msa0042940:CDS
TGAGCATATGAAGAAACTGG+TGG 0.763538 1_1:+73873245 None:intergenic
GGCGGAGGAAGATTGCGACG+CGG 0.773719 1_1:+73879514 None:intergenic
AAGGCGATATAGTTACGGAG+GGG 0.782080 1_1:+73879425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAATAATAAAAT+GGG + chr1_1:73878719-73878738 None:intergenic 0.0%
!! AAATATAAATAATAATAAAA+TGG + chr1_1:73878720-73878739 None:intergenic 0.0%
!!! GACTTTATTTTATTTTTTGT+TGG - chr1_1:73873898-73873917 Msa0042940:intron 15.0%
!! ACATCTTATAACAAATTTAA+AGG + chr1_1:73875027-73875046 None:intergenic 15.0%
!!! TAAATTTGTTATAAGATGTT+TGG - chr1_1:73875028-73875047 Msa0042940:intron 15.0%
!!! TATCTTGAAATACAATATTT+TGG - chr1_1:73875362-73875381 Msa0042940:intron 15.0%
!! TAATAGATCTTACATTATAT+TGG - chr1_1:73875592-73875611 Msa0042940:intron 15.0%
!!! TCGAAAAGTATAATATAAAA+AGG + chr1_1:73875635-73875654 None:intergenic 15.0%
!!! TATCTTTTTATTCTAGTTTT+AGG + chr1_1:73876824-73876843 None:intergenic 15.0%
!! AAAACTAGAATAAAAAGATA+AGG - chr1_1:73876824-73876843 Msa0042940:intron 15.0%
!! AAACTAGAATAAAAAGATAA+GGG - chr1_1:73876825-73876844 Msa0042940:intron 15.0%
!!! AGATTTTTTTTTTTTGGATT+TGG + chr1_1:73877040-73877059 None:intergenic 15.0%
!! TATTCATACTATGAAAATTT+GGG + chr1_1:73877178-73877197 None:intergenic 15.0%
!! ATATTCATACTATGAAAATT+TGG + chr1_1:73877179-73877198 None:intergenic 15.0%
!! TGAATATAAAATTTATTCTC+TGG - chr1_1:73877192-73877211 Msa0042940:CDS 15.0%
!!! AGATTTAGTTTTCATTTTTT+GGG - chr1_1:73877911-73877930 Msa0042940:CDS 15.0%
!!! TAAATCTGTTTTTGTTTTTT+TGG - chr1_1:73878409-73878428 Msa0042940:intron 15.0%
!!! ATATTTTTAATTTTCAGTAG+TGG - chr1_1:73878479-73878498 Msa0042940:intron 15.0%
!!! GAATAATTTGAGTTTATCTA+AGG - chr1_1:73873629-73873648 Msa0042940:intron 20.0%
!!! TTTTGATCAAAAGACATAAT+TGG + chr1_1:73875143-73875162 None:intergenic 20.0%
!! ATTTAAGCAAAAATGTAATC+TGG - chr1_1:73875457-73875476 Msa0042940:intron 20.0%
!! TTTAAGCAAAAATGTAATCT+GGG - chr1_1:73875458-73875477 Msa0042940:intron 20.0%
!!! TAATTTTGTTTTTCAACTTG+CGG - chr1_1:73876010-73876029 Msa0042940:intron 20.0%
!! ATTATTTATGTTCAAAATGC+TGG - chr1_1:73876090-73876109 Msa0042940:intron 20.0%
!! TGATATTACTTTGATATCAT+TGG + chr1_1:73876130-73876149 None:intergenic 20.0%
!!! TTTCTTTATTGATGTTTTCA+AGG - chr1_1:73876207-73876226 Msa0042940:intron 20.0%
!!! TTCTTTATTGATGTTTTCAA+GGG - chr1_1:73876208-73876227 Msa0042940:intron 20.0%
!! AGAGAAGAAATTGTTAAAAA+GGG + chr1_1:73876357-73876376 None:intergenic 20.0%
!! AAGAGAAGAAATTGTTAAAA+AGG + chr1_1:73876358-73876377 None:intergenic 20.0%
!! CATACAAAATGTTAAAATAG+AGG + chr1_1:73876554-73876573 None:intergenic 20.0%
!! AAAAGATATAAATAGACAGT+TGG + chr1_1:73876724-73876743 None:intergenic 20.0%
!!! CTACAGAGATTTTTTTTTTT+TGG + chr1_1:73877046-73877065 None:intergenic 20.0%
!! CAAAAAAAAAAAATCTCTGT+AGG - chr1_1:73877044-73877063 Msa0042940:intron 20.0%
!! TATAATTGTATGAATACTGA+TGG + chr1_1:73877095-73877114 None:intergenic 20.0%
!! ATATAAAATTTATTCTCTGG+TGG - chr1_1:73877195-73877214 Msa0042940:CDS 20.0%
!! GGAATGAATTACTTAATATA+AGG + chr1_1:73877484-73877503 None:intergenic 20.0%
!! AATAAGGTAACAAAAATAGA+AGG + chr1_1:73877505-73877524 None:intergenic 20.0%
!! CTAATTTATCTTGCAAAATA+AGG + chr1_1:73877521-73877540 None:intergenic 20.0%
!!! TATTTTGCAAGATAAATTAG+TGG - chr1_1:73877521-73877540 Msa0042940:CDS 20.0%
!!! ATTCTATTTTATCCATTTAG+AGG - chr1_1:73877549-73877568 Msa0042940:CDS 20.0%
!!! TTATGAGGATCTTTTTAAAA+AGG - chr1_1:73877735-73877754 Msa0042940:CDS 20.0%
!!! GAGATTTAGTTTTCATTTTT+TGG - chr1_1:73877910-73877929 Msa0042940:CDS 20.0%
!!! GATTTAGTTTTCATTTTTTG+GGG - chr1_1:73877912-73877931 Msa0042940:CDS 20.0%
!! TCTATCACATTCAATTAAAA+AGG + chr1_1:73878209-73878228 None:intergenic 20.0%
!!! TGTGAAAATCTTGTTTTTTT+GGG - chr1_1:73879512-73879531 Msa0042940:CDS 20.0%
! AAGAAGTTTCTTTGTAAGAA+GGG - chr1_1:73872727-73872746 Msa0042940:three_prime_UTR 25.0%
!!! GGATTTTGTTTTGTTTTGAA+GGG + chr1_1:73872788-73872807 None:intergenic 25.0%
!!! TGGATTTTGTTTTGTTTTGA+AGG + chr1_1:73872789-73872808 None:intergenic 25.0%
!!! CTTTGAAATAGGTTATGAAA+AGG + chr1_1:73873067-73873086 None:intergenic 25.0%
! CAAAATATTCATCTTGAGAA+AGG - chr1_1:73873197-73873216 Msa0042940:CDS 25.0%
!!! AGATTGGTTTAACATTTGAT+CGG - chr1_1:73873255-73873274 Msa0042940:CDS 25.0%
! TTTGAAAACACTATTGCTAA+AGG - chr1_1:73873461-73873480 Msa0042940:CDS 25.0%
!! TCTCAAATTGGATTATGTTT+TGG - chr1_1:73873536-73873555 Msa0042940:intron 25.0%
! ATATTAACAGAAACCTTGAA+AGG - chr1_1:73874335-73874354 Msa0042940:intron 25.0%
! TATTAACAGAAACCTTGAAA+GGG - chr1_1:73874336-73874355 Msa0042940:intron 25.0%
!! ATTTGTTGGATAGACTTAAT+AGG - chr1_1:73874890-73874909 Msa0042940:intron 25.0%
! TTTAAAGGAAAACACTTTAC+CGG + chr1_1:73875012-73875031 None:intergenic 25.0%
! AAAATGAAGATGCTATTGTA+GGG - chr1_1:73875159-73875178 Msa0042940:intron 25.0%
! TACTTGAAATAATAAACGAC+AGG + chr1_1:73875293-73875312 None:intergenic 25.0%
!!! GAATATTTGTAGCTATTTTC+AGG - chr1_1:73875432-73875451 Msa0042940:intron 25.0%
! AGCTTACAATGCTAAAATTA+TGG - chr1_1:73875513-73875532 Msa0042940:intron 25.0%
!!! ATCTGTAGCTTGTTTTTTAA+TGG - chr1_1:73875862-73875881 Msa0042940:intron 25.0%
!! TTTTATGTTCATTGATACAG+AGG - chr1_1:73875896-73875915 Msa0042940:intron 25.0%
! TAGTCTATAGATCAAATTAG+AGG + chr1_1:73876166-73876185 None:intergenic 25.0%
! TTGGTATCACATGTTAAAAA+TGG + chr1_1:73876234-73876253 None:intergenic 25.0%
! TTGATTACACAAGTCAAAAT+AGG + chr1_1:73876330-73876349 None:intergenic 25.0%
! GAGAAGAAATTGTTAAAAAG+GGG + chr1_1:73876356-73876375 None:intergenic 25.0%
! TTGAAATGGAGAAATATATC+AGG + chr1_1:73876499-73876518 None:intergenic 25.0%
! TTACAATAGAAACCTCTAAA+TGG + chr1_1:73877564-73877583 None:intergenic 25.0%
! TTCATTATAACAAGCTACAT+AGG + chr1_1:73877628-73877647 None:intergenic 25.0%
!! ATGCTTTTGTAAATATCTTC+AGG - chr1_1:73877675-73877694 Msa0042940:CDS 25.0%
! AATAACCAATGTATGGAAAA+AGG + chr1_1:73877942-73877961 None:intergenic 25.0%
!!! ATTTATTTTGGCATTTGTCA+GGG + chr1_1:73878024-73878043 None:intergenic 25.0%
!!! TATTTATTTTGGCATTTGTC+AGG + chr1_1:73878025-73878044 None:intergenic 25.0%
!!! TTCTGCTAGAGTATTTATTT+TGG + chr1_1:73878036-73878055 None:intergenic 25.0%
! TTCAATCTTGAAGATTACAA+AGG - chr1_1:73878320-73878339 Msa0042940:intron 25.0%
! AATCTTATAGAGAAGAACAA+CGG + chr1_1:73878353-73878372 None:intergenic 25.0%
!! TCTGATTTTTATACTTCATC+TGG - chr1_1:73878376-73878395 Msa0042940:intron 25.0%
! TATACTTCATCTGGTTAAAA+AGG - chr1_1:73878385-73878404 Msa0042940:intron 25.0%
! AACACATTCAAATAATACGA+GGG + chr1_1:73878789-73878808 None:intergenic 25.0%
! AAACACATTCAAATAATACG+AGG + chr1_1:73878790-73878809 None:intergenic 25.0%
! TCGTATTATTTGAATGTGTT+TGG - chr1_1:73878789-73878808 Msa0042940:intron 25.0%
! TGCAATTTCTTTGTTCAATT+AGG - chr1_1:73878857-73878876 Msa0042940:CDS 25.0%
! TTTATTCAAGAGATAGTGAT+CGG + chr1_1:73879454-73879473 None:intergenic 25.0%
!! CAAAAAAACAAGATTTTCAC+AGG + chr1_1:73879513-73879532 None:intergenic 25.0%
!!! CTGTGAAAATCTTGTTTTTT+TGG - chr1_1:73879511-73879530 Msa0042940:CDS 25.0%
!!! GTGAAAATCTTGTTTTTTTG+GGG - chr1_1:73879513-73879532 Msa0042940:CDS 25.0%
!!! TTTTTTGGGGTATCATATTT+AGG - chr1_1:73879526-73879545 Msa0042940:exon 25.0%
GAAGAAGTTTCTTTGTAAGA+AGG - chr1_1:73872726-73872745 Msa0042940:three_prime_UTR 30.0%
!! TTGACATAGAGCTTTGAAAT+AGG + chr1_1:73873078-73873097 None:intergenic 30.0%
TGAAATTGGAAATCGAGTTT+CGG + chr1_1:73873102-73873121 None:intergenic 30.0%
GAATGCTTCTATGAAAATCT+CGG - chr1_1:73873352-73873371 Msa0042940:CDS 30.0%
TGGGAATTCAATTCTCAAAT+TGG - chr1_1:73873524-73873543 Msa0042940:intron 30.0%
GCTGTTGATATGTTTATCTA+AGG - chr1_1:73873587-73873606 Msa0042940:intron 30.0%
! TGTTTATCTAAGGACTTGTT+TGG - chr1_1:73873597-73873616 Msa0042940:intron 30.0%
TATCAAAACTAGGTCATGTT+TGG + chr1_1:73873994-73874013 None:intergenic 30.0%
!!! AACATGACCTAGTTTTGATA+TGG - chr1_1:73873994-73874013 Msa0042940:intron 30.0%
!!! ACATGACCTAGTTTTGATAT+GGG - chr1_1:73873995-73874014 Msa0042940:intron 30.0%
!! TTATCGAAATGCTGACTTAA+AGG + chr1_1:73874109-73874128 None:intergenic 30.0%
!! ACATCTTCTTTGAGATTTGT+CGG + chr1_1:73874673-73874692 None:intergenic 30.0%
GCTCAATTTAGAAGTCAATT+CGG - chr1_1:73874826-73874845 Msa0042940:intron 30.0%
CACTTTGACAAAGAATTTGT+TGG - chr1_1:73874876-73874895 Msa0042940:intron 30.0%
!! GTTATAAGATGTTTGGTTCT+TGG - chr1_1:73875035-73875054 Msa0042940:intron 30.0%
CAAAATGAAGATGCTATTGT+AGG - chr1_1:73875158-73875177 Msa0042940:intron 30.0%
!! GGTCTTGTTATTGTTATGTT+TGG - chr1_1:73875213-73875232 Msa0042940:intron 30.0%
ATTTATCCACCTATAAGATC+TGG - chr1_1:73875316-73875335 Msa0042940:intron 30.0%
! GGTGAAGGATAATTCTATTT+TGG - chr1_1:73875337-73875356 Msa0042940:intron 30.0%
! TTTTAATAGGTTTTGCGTTG+AGG - chr1_1:73875410-73875429 Msa0042940:intron 30.0%
TACAATGCTAAAATTATGGC+TGG - chr1_1:73875517-73875536 Msa0042940:intron 30.0%
CATTTAAACTCATGTATGCA+TGG - chr1_1:73875569-73875588 Msa0042940:intron 30.0%
! CATCCTTGCTATGTATATAA+CGG - chr1_1:73875663-73875682 Msa0042940:intron 30.0%
AATCCGTTATATACATAGCA+AGG + chr1_1:73875669-73875688 None:intergenic 30.0%
TCACATCTCAAATTTATTCC+AGG + chr1_1:73875772-73875791 None:intergenic 30.0%
! CTTTTCTGTCTGGTTATAAA+AGG - chr1_1:73876046-73876065 Msa0042940:intron 30.0%
ACATAAATAATGCACATTGC+AGG + chr1_1:73876081-73876100 None:intergenic 30.0%
TATAGATCAAATTAGAGGCA+GGG + chr1_1:73876161-73876180 None:intergenic 30.0%
TAGACTATAGTGATATCATC+TGG - chr1_1:73876179-73876198 Msa0042940:intron 30.0%
CTCGTATTGTAAAAAGATAG+CGG + chr1_1:73876270-73876289 None:intergenic 30.0%
CAATCATTAGAGGGAAAATT+GGG + chr1_1:73876297-73876316 None:intergenic 30.0%
TTAGACATGCAATCATTAGA+GGG + chr1_1:73876306-73876325 None:intergenic 30.0%
ATTAGACATGCAATCATTAG+AGG + chr1_1:73876307-73876326 None:intergenic 30.0%
AAGAAATTGTTAAAAAGGGG+TGG + chr1_1:73876353-73876372 None:intergenic 30.0%
AACATCCTATAGAACATTGT+AGG - chr1_1:73876416-73876435 Msa0042940:CDS 30.0%
! ACAAATTTTCCTTGAAGTCA+AGG - chr1_1:73876455-73876474 Msa0042940:intron 30.0%
TCCATTTCAACTACTATACT+TGG - chr1_1:73876509-73876528 Msa0042940:intron 30.0%
TCCAAGTATAGTAGTTGAAA+TGG + chr1_1:73876513-73876532 None:intergenic 30.0%
CCTAGCTTGAAAGTAAAAAA+TGG + chr1_1:73876625-73876644 None:intergenic 30.0%
!!! CCATTTTTTACTTTCAAGCT+AGG - chr1_1:73876622-73876641 Msa0042940:intron 30.0%
TAAATAGACAGTTGGAGATA+TGG + chr1_1:73876716-73876735 None:intergenic 30.0%
AAAACTAGTACAAGAACACA+GGG + chr1_1:73876920-73876939 None:intergenic 30.0%
TAAAACTAGTACAAGAACAC+AGG + chr1_1:73876921-73876940 None:intergenic 30.0%
! TTGAAGTACTTAGAGAAGTT+TGG + chr1_1:73877004-73877023 None:intergenic 30.0%
TAAGACAAGAGACTCTTATT+AGG + chr1_1:73877134-73877153 None:intergenic 30.0%
TACTATGAAAATTTGGGAGA+GGG + chr1_1:73877172-73877191 None:intergenic 30.0%
ATACTATGAAAATTTGGGAG+AGG + chr1_1:73877173-73877192 None:intergenic 30.0%
! GAGAATTCAAAGACTTTTGT+TGG + chr1_1:73877226-73877245 None:intergenic 30.0%
TACTCTAATGAAGCATAGTA+CGG + chr1_1:73877318-73877337 None:intergenic 30.0%
AAGAATCAAGAGTGAAAACA+TGG + chr1_1:73877421-73877440 None:intergenic 30.0%
ATTATAACAAGCTACATAGG+AGG + chr1_1:73877625-73877644 None:intergenic 30.0%
AAAAAGATCCTCATAAGAAC+CGG + chr1_1:73877731-73877750 None:intergenic 30.0%
AATCCAGGTATGTTTATATC+TGG - chr1_1:73877831-73877850 Msa0042940:CDS 30.0%
ATGCATGAGACTATTTACAA+GGG + chr1_1:73877860-73877879 None:intergenic 30.0%
TATGCATGAGACTATTTACA+AGG + chr1_1:73877861-73877880 None:intergenic 30.0%
! GATTACCTTTTTCCATACAT+TGG - chr1_1:73877934-73877953 Msa0042940:CDS 30.0%
! CATACATTGGTTATTCACAT+GGG - chr1_1:73877947-73877966 Msa0042940:CDS 30.0%
!!! TTTATTTTGGCATTTGTCAG+GGG + chr1_1:73878023-73878042 None:intergenic 30.0%
ACCATCAATACAACTACAAA+GGG + chr1_1:73878181-73878200 None:intergenic 30.0%
AACCATCAATACAACTACAA+AGG + chr1_1:73878182-73878201 None:intergenic 30.0%
TTGAATGTGATAGATGTTAG+AGG - chr1_1:73878215-73878234 Msa0042940:CDS 30.0%
ATCTTGAAGATTACAAAGGT+AGG - chr1_1:73878324-73878343 Msa0042940:intron 30.0%
GGAATTCATCAAAACAAGAA+GGG + chr1_1:73878559-73878578 None:intergenic 30.0%
AGGAATTCATCAAAACAAGA+AGG + chr1_1:73878560-73878579 None:intergenic 30.0%
TATTTCTCGAAACTTTGCTA+TGG + chr1_1:73878633-73878652 None:intergenic 30.0%
AGCAAAGTTTCGAGAAATAA+AGG - chr1_1:73878634-73878653 Msa0042940:intron 30.0%
ATAAAGGACAACATCAATGA+AGG - chr1_1:73878650-73878669 Msa0042940:intron 30.0%
TAAAGGACAACATCAATGAA+GGG - chr1_1:73878651-73878670 Msa0042940:intron 30.0%
AATAAAATGGGAAGTTCTCA+AGG + chr1_1:73878707-73878726 None:intergenic 30.0%
!! GTGTATTGGATCTTTGATTT+TGG + chr1_1:73879043-73879062 None:intergenic 30.0%
CACTATCTCTTGAATAAATG+AGG - chr1_1:73879456-73879475 Msa0042940:CDS 30.0%
AATGGAAGGCGATATAGTTA+CGG + chr1_1:73872938-73872957 None:intergenic 35.0%
TGATCAGGTTCAGATGAAAT+TGG + chr1_1:73873116-73873135 None:intergenic 35.0%
!! TGCTGAGAAGCTTTTTGTTT+CGG + chr1_1:73873179-73873198 None:intergenic 35.0%
AAGGACATGTTATCTAAGCA+CGG - chr1_1:73873648-73873667 Msa0042940:intron 35.0%
CCAAAACCCATATCAAAACT+AGG + chr1_1:73874004-73874023 None:intergenic 35.0%
!!! CCTAGTTTTGATATGGGTTT+TGG - chr1_1:73874001-73874020 Msa0042940:intron 35.0%
!!! TGATATGGGTTTTGGTTTTG+TGG - chr1_1:73874009-73874028 Msa0042940:intron 35.0%
!! GCTGAAGCTTGTTATAGATA+TGG - chr1_1:73874172-73874191 Msa0042940:intron 35.0%
TGATGCGATTAACAAGTTAG+AGG - chr1_1:73874309-73874328 Msa0042940:intron 35.0%
TGATGGCATTATAAGAACAC+AGG - chr1_1:73874549-73874568 Msa0042940:CDS 35.0%
GACAAATCTCAAAGAAGATG+TGG - chr1_1:73874672-73874691 Msa0042940:intron 35.0%
AAATCTCAAAGAAGATGTGG+AGG - chr1_1:73874675-73874694 Msa0042940:intron 35.0%
GATAGACTTAATAGGTTTGC+AGG - chr1_1:73874898-73874917 Msa0042940:intron 35.0%
!! AAGATGTTTGGTTCTTGGTA+TGG - chr1_1:73875040-73875059 Msa0042940:intron 35.0%
TATCCTTCACCAGATCTTAT+AGG + chr1_1:73875328-73875347 None:intergenic 35.0%
!! TATTTTGAACGTGTTATGCC+TGG - chr1_1:73875387-73875406 Msa0042940:intron 35.0%
!!! GTGTTATGCCTGGTTTTAAT+AGG - chr1_1:73875397-73875416 Msa0042940:intron 35.0%
ACGCAAAACCTATTAAAACC+AGG + chr1_1:73875408-73875427 None:intergenic 35.0%
! CTTACATTATATTGGCTGAC+TGG - chr1_1:73875600-73875619 Msa0042940:intron 35.0%
GCTTAGAGAGATGAAAAGAA+AGG - chr1_1:73875963-73875982 Msa0042940:intron 35.0%
ATAGATCAAATTAGAGGCAG+GGG + chr1_1:73876160-73876179 None:intergenic 35.0%
CTATAGATCAAATTAGAGGC+AGG + chr1_1:73876162-73876181 None:intergenic 35.0%
GCAATCATTAGAGGGAAAAT+TGG + chr1_1:73876298-73876317 None:intergenic 35.0%
TTACTTCCTCAGCTCTTTAA+TGG - chr1_1:73876389-73876408 Msa0042940:intron 35.0%
CAATGTTCTATAGGATGTTG+TGG + chr1_1:73876415-73876434 None:intergenic 35.0%
CCAAACCTACAATGTTCTAT+AGG + chr1_1:73876424-73876443 None:intergenic 35.0%
CCTATAGAACATTGTAGGTT+TGG - chr1_1:73876421-73876440 Msa0042940:CDS 35.0%
ATAGAACATTGTAGGTTTGG+TGG - chr1_1:73876424-73876443 Msa0042940:CDS 35.0%
ATGATGTATCCTTGACTTCA+AGG + chr1_1:73876467-73876486 None:intergenic 35.0%
GGAGATATGGAAACAAGTTT+GGG + chr1_1:73876703-73876722 None:intergenic 35.0%
TGGAGATATGGAAACAAGTT+TGG + chr1_1:73876704-73876723 None:intergenic 35.0%
!! TATCTTTTAACTCTCTGACG+AGG - chr1_1:73876736-73876755 Msa0042940:intron 35.0%
ATAGTATAGGTGTCCAACAA+GGG + chr1_1:73876862-73876881 None:intergenic 35.0%
TATAGTATAGGTGTCCAACA+AGG + chr1_1:73876863-73876882 None:intergenic 35.0%
GTGATCATACGGTATAGTAT+AGG + chr1_1:73876875-73876894 None:intergenic 35.0%
ATACTATACCGTATGATCAC+AGG - chr1_1:73876875-73876894 Msa0042940:intron 35.0%
!! CAGAAGGCTTTAGATAAGAA+AGG + chr1_1:73876981-73877000 None:intergenic 35.0%
GAATACTGATGGAGTGATAT+TGG + chr1_1:73877084-73877103 None:intergenic 35.0%
GACTCTTATTAGGTCAACAA+TGG + chr1_1:73877124-73877143 None:intergenic 35.0%
! TTCAAAGACTTTTGTTGGAG+TGG + chr1_1:73877221-73877240 None:intergenic 35.0%
GGAAGAATGGTAAAGAAGAT+AGG + chr1_1:73877248-73877267 None:intergenic 35.0%
CAAAAAAACAGAGGAAAACG+AGG + chr1_1:73877277-73877296 None:intergenic 35.0%
CATAGATACGACAAAACTGA+TGG + chr1_1:73877374-73877393 None:intergenic 35.0%
TGTAGGTGCAAAGAATTGAT+GGG - chr1_1:73877590-73877609 Msa0042940:CDS 35.0%
GAGCTATGTCTTCAGAAATA+TGG + chr1_1:73877777-73877796 None:intergenic 35.0%
AGACATAGCTCAGAATATTG+AGG - chr1_1:73877786-73877805 Msa0042940:CDS 35.0%
TGTCCAGATATAAACATACC+TGG + chr1_1:73877837-73877856 None:intergenic 35.0%
GAAATATGTCGCAACTATCT+AGG - chr1_1:73877888-73877907 Msa0042940:CDS 35.0%
CCATGTGAATAACCAATGTA+TGG + chr1_1:73877949-73877968 None:intergenic 35.0%
! CCATACATTGGTTATTCACA+TGG - chr1_1:73877946-73877965 Msa0042940:CDS 35.0%
TTCACATGGGATTATACTCT+TGG - chr1_1:73877960-73877979 Msa0042940:CDS 35.0%
AGATGAACTAATGTCTGGAA+AGG - chr1_1:73878113-73878132 Msa0042940:CDS 35.0%
AATGTCTGGAAAGGCAAAAA+TGG - chr1_1:73878122-73878141 Msa0042940:CDS 35.0%
! TGGTATTGTTGTTGTAAGCA+AGG - chr1_1:73878142-73878161 Msa0042940:CDS 35.0%
! GGTATTGTTGTTGTAAGCAA+GGG - chr1_1:73878143-73878162 Msa0042940:CDS 35.0%
TCCCTTTGTAGTTGTATTGA+TGG - chr1_1:73878177-73878196 Msa0042940:CDS 35.0%
GATAGATGTTAGAGGAAATC+AGG - chr1_1:73878223-73878242 Msa0042940:CDS 35.0%
AATTGTTTGCCATTGTTCAC+AGG - chr1_1:73878271-73878290 Msa0042940:CDS 35.0%
!! AGAAGGGTGGACTATAAAAA+TGG + chr1_1:73878543-73878562 None:intergenic 35.0%
ATTCATCAAAACAAGAAGGG+TGG + chr1_1:73878556-73878575 None:intergenic 35.0%
AAAATTCTATGTTACCCTGC+AGG - chr1_1:73878676-73878695 Msa0042940:intron 35.0%
TGTGTTTGGATAGTACTGTT+TGG - chr1_1:73878803-73878822 Msa0042940:intron 35.0%
GCAATGACTTTGTAATGACA+AGG - chr1_1:73878907-73878926 Msa0042940:CDS 35.0%
AGTTTCCAGGATAAAAACAC+AGG - chr1_1:73878984-73879003 Msa0042940:CDS 35.0%
TGGCTGATAATAAGGATTCT+GGG + chr1_1:73879081-73879100 None:intergenic 35.0%
ATGGCTGATAATAAGGATTC+TGG + chr1_1:73879082-73879101 None:intergenic 35.0%
ATGGAGATGGAATGGTATAA+GGG + chr1_1:73879349-73879368 None:intergenic 35.0%
TATGGAGATGGAATGGTATA+AGG + chr1_1:73879350-73879369 None:intergenic 35.0%
!! GTATCATATTTAGGTTGCGT+TGG - chr1_1:73879535-73879554 Msa0042940:exon 35.0%
CTTAGTTTACTTCCTCGCTA+AGG - chr1_1:73872702-73872721 Msa0042940:three_prime_UTR 40.0%
!! AGGCGCTGTGTTGTTTAATT+TGG - chr1_1:73873217-73873236 Msa0042940:CDS 40.0%
ACCAATCTGACTGTAAACAG+CGG + chr1_1:73873243-73873262 None:intergenic 40.0%
TTTGATCGGAATACCGTTGA+CGG - chr1_1:73873269-73873288 Msa0042940:CDS 40.0%
GCTTCTATGAAAATCTCGGT+TGG - chr1_1:73873356-73873375 Msa0042940:CDS 40.0%
TAACATTCCAGCACACTCAA+CGG + chr1_1:73873405-73873424 None:intergenic 40.0%
!! ATTGCTAAAGGAAGTACTCC+TGG - chr1_1:73873473-73873492 Msa0042940:CDS 40.0%
GTGTTTGTGCTAAGATCTCT+AGG - chr1_1:73873495-73873514 Msa0042940:intron 40.0%
TTGAACGCAATCACATGTGT+TGG - chr1_1:73873734-73873753 Msa0042940:CDS 40.0%
! AATCACATGTGTTGGTGTAC+TGG - chr1_1:73873742-73873761 Msa0042940:CDS 40.0%
! AGCTTGTTTCCATAAGCTCT+CGG - chr1_1:73873820-73873839 Msa0042940:intron 40.0%
ATAAGCTATCCGAGAGCTTA+TGG + chr1_1:73873832-73873851 None:intergenic 40.0%
ATGAAAACACCTTCTACCTG+AGG - chr1_1:73873850-73873869 Msa0042940:intron 40.0%
TGAAAACACCTTCTACCTGA+GGG - chr1_1:73873851-73873870 Msa0042940:intron 40.0%
! CTAACTTGCGCAATTGATGT+AGG - chr1_1:73874039-73874058 Msa0042940:CDS 40.0%
TTGCGCAATTGATGTAGGTT+GGG - chr1_1:73874044-73874063 Msa0042940:CDS 40.0%
! GCTGTATTATGAGGAAGCAT+TGG - chr1_1:73874066-73874085 Msa0042940:intron 40.0%
GCATGAGAAAGAGGAAATAG+CGG - chr1_1:73874204-73874223 Msa0042940:intron 40.0%
TGCTATTAGTGTGCTTACTG+AGG - chr1_1:73874249-73874268 Msa0042940:intron 40.0%
TAGTTCATTGTCACCTCTTC+CGG - chr1_1:73874405-73874424 Msa0042940:intron 40.0%
ATCAACCATTTCAGTGTACC+TGG + chr1_1:73874533-73874552 None:intergenic 40.0%
AGGTACACTGAAATGGTTGA+TGG - chr1_1:73874532-73874551 Msa0042940:intron 40.0%
TCCAGAGCAAGAATAGAATC+CGG + chr1_1:73874634-73874653 None:intergenic 40.0%
! GATTCTATTCTTGCTCTGGA+AGG - chr1_1:73874634-73874653 Msa0042940:CDS 40.0%
GTTCTTGATTAACCCTCCTT+AGG + chr1_1:73874759-73874778 None:intergenic 40.0%
GAAGTCAATTCGGCACTAAA+TGG - chr1_1:73874836-73874855 Msa0042940:intron 40.0%
! AATTCGGCACTAAATGGACT+AGG - chr1_1:73874842-73874861 Msa0042940:intron 40.0%
! TTTGTCAAAGTGCTTGACTG+AGG + chr1_1:73874868-73874887 None:intergenic 40.0%
AAGGAAAACACTTTACCGGA+CGG + chr1_1:73875008-73875027 None:intergenic 40.0%
! AAAGCTTGGTATGTCGTTTC+TGG - chr1_1:73875192-73875211 Msa0042940:intron 40.0%
CGACAGGTATATCTACACTA+TGG + chr1_1:73875277-73875296 None:intergenic 40.0%
!! CTGATCAATTGAGCGTTGAA+TGG - chr1_1:73875699-73875718 Msa0042940:intron 40.0%
CTAGAAGAACGAAGAAATCC+TGG - chr1_1:73875751-73875770 Msa0042940:intron 40.0%
! TAGAAACTCTAGGAGCTCAA+AGG - chr1_1:73875923-73875942 Msa0042940:intron 40.0%
! AGAAACTCTAGGAGCTCAAA+GGG - chr1_1:73875924-73875943 Msa0042940:intron 40.0%
! AGAAGTGAGACTTTTCTGTC+TGG - chr1_1:73876036-73876055 Msa0042940:intron 40.0%
ATGCACATTGCAGGAAAAGA+TGG + chr1_1:73876072-73876091 None:intergenic 40.0%
TAGATCAAATTAGAGGCAGG+GGG + chr1_1:73876159-73876178 None:intergenic 40.0%
AAGGTTTGCCTGTGATCATA+CGG + chr1_1:73876886-73876905 None:intergenic 40.0%
ACACAGGGATGGAATACAAA+AGG + chr1_1:73876905-73876924 None:intergenic 40.0%
ACTTAGAGAAGTTTGGCAGA+AGG + chr1_1:73876997-73877016 None:intergenic 40.0%
GAGTGAGTGCAAAAAAACAG+AGG + chr1_1:73877286-73877305 None:intergenic 40.0%
CTAATGAAGCATAGTACGGA+AGG + chr1_1:73877314-73877333 None:intergenic 40.0%
CACTCTTGATTCTTGCGTAA+AGG - chr1_1:73877427-73877446 Msa0042940:CDS 40.0%
TTCTATTGTAATGCCGCTGT+AGG - chr1_1:73877573-73877592 Msa0042940:CDS 40.0%
TCAATTCTTTGCACCTACAG+CGG + chr1_1:73877589-73877608 None:intergenic 40.0%
CTGTAGGTGCAAAGAATTGA+TGG - chr1_1:73877589-73877608 Msa0042940:CDS 40.0%
CATTAGTTCATCTCTCTGAG+TGG + chr1_1:73878106-73878125 None:intergenic 40.0%
CAGAGAGATGAACTAATGTC+TGG - chr1_1:73878108-73878127 Msa0042940:CDS 40.0%
! CATTTTGAGCCTGTGAACAA+TGG + chr1_1:73878283-73878302 None:intergenic 40.0%
GTGAAGCTGGAAAGATTACA+AGG + chr1_1:73878580-73878599 None:intergenic 40.0%
! TAGGATTTTTCACGTGAAGC+TGG + chr1_1:73878593-73878612 None:intergenic 40.0%
TTCCAGGATAAAAACACAGG+TGG - chr1_1:73878987-73879006 Msa0042940:CDS 40.0%
TAACAACAACTACCCTTCAG+TGG - chr1_1:73879013-73879032 Msa0042940:CDS 40.0%
AACAACAACTACCCTTCAGT+GGG - chr1_1:73879014-73879033 Msa0042940:CDS 40.0%
!!! GATTTTGGTTTCCCACTGAA+GGG + chr1_1:73879028-73879047 None:intergenic 40.0%
!!! TGATTTTGGTTTCCCACTGA+AGG + chr1_1:73879029-73879048 None:intergenic 40.0%
ACGAGGATCTGTTTGTGTAT+TGG + chr1_1:73879057-73879076 None:intergenic 40.0%
GGCTGATAATAAGGATTCTG+GGG + chr1_1:73879080-73879099 None:intergenic 40.0%
TGCTCAGATGGCTGATAATA+AGG + chr1_1:73879089-73879108 None:intergenic 40.0%
TGAGCATATGAAGAAACTGG+TGG + chr1_1:73879113-73879132 None:intergenic 40.0%
GGATGAGCATATGAAGAAAC+TGG + chr1_1:73879116-73879135 None:intergenic 40.0%
TGATGTGAATGGCCATATGA+TGG + chr1_1:73879143-73879162 None:intergenic 40.0%
! TGACCATAATCATGGTTTGC+TGG + chr1_1:73879245-73879264 None:intergenic 40.0%
GTGGGTGCATTATTGTAGTA+TGG + chr1_1:73879293-73879312 None:intergenic 40.0%
TGGAGATGGAATGGTATAAG+GGG + chr1_1:73879348-73879367 None:intergenic 40.0%
TTAAGACGAAGAGCTAGATG+TGG + chr1_1:73879487-73879506 None:intergenic 40.0%
!! TGTTGACTTGTACTTTGCGA+AGG - chr1_1:73879620-73879639 Msa0042940:five_prime_UTR 40.0%
!! GTTGACTTGTACTTTGCGAA+GGG - chr1_1:73879621-73879640 Msa0042940:five_prime_UTR 40.0%
!! TTGACTTGTACTTTGCGAAG+GGG - chr1_1:73879622-73879641 Msa0042940:five_prime_UTR 40.0%
GAAACTTCTTCACCTTAGCG+AGG + chr1_1:73872717-73872736 None:intergenic 45.0%
TAGCATTCACCACCGAATCA+TGG - chr1_1:73872818-73872837 Msa0042940:three_prime_UTR 45.0%
!! CATGATGTTGGTGTTGCCTA+CGG + chr1_1:73872865-73872884 None:intergenic 45.0%
GAAGATTGCGAGCATGATGT+TGG + chr1_1:73872877-73872896 None:intergenic 45.0%
AAGGCGATATAGTTACGGAG+GGG + chr1_1:73872933-73872952 None:intergenic 45.0%
GAAGGCGATATAGTTACGGA+GGG + chr1_1:73872934-73872953 None:intergenic 45.0%
! TTCGCGTTCAGAGTAATGGA+AGG + chr1_1:73872952-73872971 None:intergenic 45.0%
!! GTCGGAACGGAGTTGTTTTA+GGG + chr1_1:73873003-73873022 None:intergenic 45.0%
TATGAAAAGGTCACGTCGTG+CGG + chr1_1:73873054-73873073 None:intergenic 45.0%
TTAACGCACTCACCTTCGTT+TGG - chr1_1:73873138-73873157 Msa0042940:CDS 45.0%
GAACGCATCAAACCAAACGA+AGG + chr1_1:73873153-73873172 None:intergenic 45.0%
! GCAGGCTTCTCATGCTTTTA+TGG - chr1_1:73873298-73873317 Msa0042940:CDS 45.0%
! GGCTTCTCATGCTTTTATGG+CGG - chr1_1:73873301-73873320 Msa0042940:CDS 45.0%
! TTCTCATGCTTTTATGGCGG+CGG - chr1_1:73873304-73873323 Msa0042940:CDS 45.0%
AACGGACAAATCAAGAGTGG+TGG + chr1_1:73873387-73873406 None:intergenic 45.0%
CTCAACGGACAAATCAAGAG+TGG + chr1_1:73873390-73873409 None:intergenic 45.0%
GAGATCTTAGCACAAACACC+AGG + chr1_1:73873494-73873513 None:intergenic 45.0%
TTGTGCTAAGATCTCTAGGC+AGG - chr1_1:73873499-73873518 Msa0042940:intron 45.0%
TAAGATCTCTAGGCAGGTCT+GGG - chr1_1:73873505-73873524 Msa0042940:intron 45.0%
CTTGCGCAATTGATGTAGGT+TGG - chr1_1:73874043-73874062 Msa0042940:CDS 45.0%
! GTAGGTTGGGCTGTATTATG+AGG - chr1_1:73874057-73874076 Msa0042940:CDS 45.0%
GTCAGCATTTCGATAAGTCG+TGG - chr1_1:73874113-73874132 Msa0042940:intron 45.0%
ACTAGAGCTGCATGAGAAAG+AGG - chr1_1:73874195-73874214 Msa0042940:intron 45.0%
TGAGAAAGAGGAAATAGCGG+AGG - chr1_1:73874207-73874226 Msa0042940:intron 45.0%
TGAGGCGAAGAAAAACTCCA+GGG - chr1_1:73874267-73874286 Msa0042940:intron 45.0%
AAACCTTGAAAGGGCTGTCA+AGG - chr1_1:73874345-73874364 Msa0042940:intron 45.0%
AGAGGTGACAATGAACTAGC+AGG + chr1_1:73874403-73874422 None:intergenic 45.0%
AGCACCTCACTCATTACCAT+CGG + chr1_1:73874448-73874467 None:intergenic 45.0%
TGTTCCTGACAATAGTGCCA+AGG - chr1_1:73874501-73874520 Msa0042940:intron 45.0%
TCTCTCCAGGTACACTGAAA+TGG - chr1_1:73874525-73874544 Msa0042940:intron 45.0%
GCTTAGGGAAATGGAATTGC+CGG - chr1_1:73874612-73874631 Msa0042940:CDS 45.0%
AACTCTGATTCCAAACCAGC+AGG + chr1_1:73874721-73874740 None:intergenic 45.0%
ATCAGAGTTGCAGCAGCTTA+AGG - chr1_1:73874732-73874751 Msa0042940:intron 45.0%
GAGGGTTAATCAAGAACTGC+TGG - chr1_1:73874762-73874781 Msa0042940:intron 45.0%
TTCCTTCTGCAACAACTCCT+CGG + chr1_1:73874794-73874813 None:intergenic 45.0%
AGGTAACTTGAAGCAAGCTG+CGG - chr1_1:73874918-73874937 Msa0042940:intron 45.0%
! TAGAGAACATGCAGCACTGA+TGG - chr1_1:73874969-73874988 Msa0042940:intron 45.0%
AGGAAAACACTTTACCGGAC+GGG + chr1_1:73875007-73875026 None:intergenic 45.0%
TGAATCTGCACTTCCAAGTC+TGG - chr1_1:73875112-73875131 Msa0042940:intron 45.0%
!! ATAATTGGCCTTGCCAGACT+TGG + chr1_1:73875128-73875147 None:intergenic 45.0%
AGGGTCTCTCAAACAAAGCT+TGG - chr1_1:73875178-73875197 Msa0042940:intron 45.0%
CCTTCACCAGATCTTATAGG+TGG + chr1_1:73875325-73875344 None:intergenic 45.0%
CCACCTATAAGATCTGGTGA+AGG - chr1_1:73875322-73875341 Msa0042940:intron 45.0%
CAGAGGCAACTAGAAACTCT+AGG - chr1_1:73875913-73875932 Msa0042940:intron 45.0%
AGATCAAATTAGAGGCAGGG+GGG + chr1_1:73876158-73876177 None:intergenic 45.0%
TAGCGGAGTCTCATCTTAGT+TGG + chr1_1:73876253-73876272 None:intergenic 45.0%
TTGTGGCCATTAAAGAGCTG+AGG + chr1_1:73876398-73876417 None:intergenic 45.0%
! TCCCAGAAAAGCATGCACAT+TGG - chr1_1:73876767-73876786 Msa0042940:intron 45.0%
! GCCAATGTGCATGCTTTTCT+GGG + chr1_1:73876771-73876790 None:intergenic 45.0%
! TGCCAATGTGCATGCTTTTC+TGG + chr1_1:73876772-73876791 None:intergenic 45.0%
CTAGTACAAGAACACAGGGA+TGG + chr1_1:73876916-73876935 None:intergenic 45.0%
TTTGGGAGAGGGTGATTGAA+TGG + chr1_1:73877161-73877180 None:intergenic 45.0%
AACAGAGGAAAACGAGGATG+CGG + chr1_1:73877271-73877290 None:intergenic 45.0%
! AAGCATAGTACGGAAGGTAC+TGG + chr1_1:73877308-73877327 None:intergenic 45.0%
AAAACATGGCCTCCACACTT+GGG + chr1_1:73877407-73877426 None:intergenic 45.0%
AAGATCCTCATAAGAACCGG+TGG + chr1_1:73877728-73877747 None:intergenic 45.0%
ACAACTGTTGCTGCAAATCC+AGG - chr1_1:73877816-73877835 Msa0042940:CDS 45.0%
TGTTGTTGTAAGCAAGGGCA+TGG - chr1_1:73878148-73878167 Msa0042940:CDS 45.0%
CTTCAATCATTTCCCTGCAC+TGG + chr1_1:73878938-73878957 None:intergenic 45.0%
GATGTTCAGAGACAAGTAGC+TGG - chr1_1:73878957-73878976 Msa0042940:CDS 45.0%
!! AGTAGCTGGTTTGAGTTTCC+AGG - chr1_1:73878971-73878990 Msa0042940:CDS 45.0%
!! AGCCACCTGTGTTTTTATCC+TGG + chr1_1:73878992-73879011 None:intergenic 45.0%
! TAATAAGGATTCTGGGGACG+AGG + chr1_1:73879074-73879093 None:intergenic 45.0%
! TGAATGGCCATATGATGGAG+GGG + chr1_1:73879138-73879157 None:intergenic 45.0%
! GTGAATGGCCATATGATGGA+GGG + chr1_1:73879139-73879158 None:intergenic 45.0%
TGTGAATGGCCATATGATGG+AGG + chr1_1:73879140-73879159 None:intergenic 45.0%
!! CCATAATCATGGTTTGCTGG+TGG + chr1_1:73879242-73879261 None:intergenic 45.0%
CCACCAGCAAACCATGATTA+TGG - chr1_1:73879239-73879258 Msa0042940:CDS 45.0%
GAGATGGAATGGTATAAGGG+GGG + chr1_1:73879346-73879365 None:intergenic 45.0%
GGAGATGGAATGGTATAAGG+GGG + chr1_1:73879347-73879366 None:intergenic 45.0%
TGGAGGATATGGAGATGGAA+TGG + chr1_1:73879357-73879376 None:intergenic 45.0%
TTATAGTAGCCACCTTGGTG+AGG + chr1_1:73879380-73879399 None:intergenic 45.0%
!! GCGTTGGTTTGCATTGTCAT+TGG - chr1_1:73879551-73879570 Msa0042940:five_prime_UTR 45.0%
CGATATAGTTACGGAGGGGA+CGG + chr1_1:73872929-73872948 None:intergenic 50.0%
GGAAGGCGATATAGTTACGG+AGG + chr1_1:73872935-73872954 None:intergenic 50.0%
GTGCTTCGCGTTCAGAGTAA+TGG + chr1_1:73872956-73872975 None:intergenic 50.0%
GGGTTTGAAGATCGTCTTCG+AGG + chr1_1:73872983-73873002 None:intergenic 50.0%
!! GGTCGGAACGGAGTTGTTTT+AGG + chr1_1:73873004-73873023 None:intergenic 50.0%
AGTGACGTTCAAGGTCGGAA+CGG + chr1_1:73873016-73873035 None:intergenic 50.0%
ATCGGAGTGACGTTCAAGGT+CGG + chr1_1:73873021-73873040 None:intergenic 50.0%
ATGGATCGGAGTGACGTTCA+AGG + chr1_1:73873025-73873044 None:intergenic 50.0%
ATGAAAAGGTCACGTCGTGC+GGG + chr1_1:73873053-73873072 None:intergenic 50.0%
GTGAGTGCGTTAACGTGATC+AGG + chr1_1:73873131-73873150 None:intergenic 50.0%
GCCGCTGTTTACAGTCAGAT+TGG - chr1_1:73873239-73873258 Msa0042940:CDS 50.0%
GATTTGTCCGTTGAGTGTGC+TGG - chr1_1:73873395-73873414 Msa0042940:CDS 50.0%
CTAAGATCTCTAGGCAGGTC+TGG - chr1_1:73873504-73873523 Msa0042940:intron 50.0%
CAACATGTCAACGTCGAGAC+TGG + chr1_1:73873683-73873702 None:intergenic 50.0%
CGACGTTGACATGTTGACAG+TGG - chr1_1:73873687-73873706 Msa0042940:CDS 50.0%
TGGTGTACTGGACACACCTT+CGG - chr1_1:73873754-73873773 Msa0042940:CDS 50.0%
! AAATAGCGGAGGAGATTGCG+CGG - chr1_1:73874218-73874237 Msa0042940:intron 50.0%
CTGAGGCGAAGAAAAACTCC+AGG - chr1_1:73874266-73874285 Msa0042940:intron 50.0%
GAGGCGAAGAAAAACTCCAG+GGG - chr1_1:73874268-73874287 Msa0042940:intron 50.0%
TCTCCTTGACAGCCCTTTCA+AGG + chr1_1:73874351-73874370 None:intergenic 50.0%
GGTGACAATGAACTAGCAGG+AGG + chr1_1:73874400-73874419 None:intergenic 50.0%
!! CATCGGCTTCACCATAGCAA+AGG + chr1_1:73874431-73874450 None:intergenic 50.0%
! CTTTGCTATGGTGAAGCCGA+TGG - chr1_1:73874429-73874448 Msa0042940:intron 50.0%
! GAAGCCGATGGTAATGAGTG+AGG - chr1_1:73874441-73874460 Msa0042940:intron 50.0%
! GATGGTAATGAGTGAGGTGC+TGG - chr1_1:73874447-73874466 Msa0042940:intron 50.0%
AGAGCCTTGGCACTATTGTC+AGG + chr1_1:73874508-73874527 None:intergenic 50.0%
AGCAAGCTAGTGAGCTAACC+CGG - chr1_1:73874584-73874603 Msa0042940:CDS 50.0%
CATTTCCCTAAGCCTAACCC+GGG + chr1_1:73874605-73874624 None:intergenic 50.0%
CCATTTCCCTAAGCCTAACC+CGG + chr1_1:73874606-73874625 None:intergenic 50.0%
GCCGGATTCTATTCTTGCTC+TGG - chr1_1:73874630-73874649 Msa0042940:CDS 50.0%
TGCAGCAGCTTAAGGACCTA+AGG - chr1_1:73874740-73874759 Msa0042940:intron 50.0%
AGCAGCTTAAGGACCTAAGG+AGG - chr1_1:73874743-73874762 Msa0042940:intron 50.0%
GCAGCTTAAGGACCTAAGGA+GGG - chr1_1:73874744-73874763 Msa0042940:intron 50.0%
TGCATGCTAAACGTGTCCGA+GGG + chr1_1:73876799-73876818 None:intergenic 50.0%
ATGCATGCTAAACGTGTCCG+AGG + chr1_1:73876800-73876819 None:intergenic 50.0%
ACAGAGGAAAACGAGGATGC+GGG + chr1_1:73877270-73877289 None:intergenic 50.0%
GAAAACATGGCCTCCACACT+TGG + chr1_1:73877408-73877427 None:intergenic 50.0%
CCGGTGGATGTCATCAACTT+GGG + chr1_1:73877712-73877731 None:intergenic 50.0%
!! CCCAAGTTGATGACATCCAC+CGG - chr1_1:73877709-73877728 Msa0042940:CDS 50.0%
ACCGGTGGATGTCATCAACT+TGG + chr1_1:73877713-73877732 None:intergenic 50.0%
!! GACATCCACCGGTTCTTATG+AGG - chr1_1:73877720-73877739 Msa0042940:CDS 50.0%
GTCAGGGGTAATCAAGTGAG+AGG + chr1_1:73878008-73878027 None:intergenic 50.0%
GGCAGCTTCAATCTGCTTGT+AGG + chr1_1:73878612-73878631 None:intergenic 50.0%
TTCTCAAGGTCTTGCCTGCA+GGG + chr1_1:73878693-73878712 None:intergenic 50.0%
TGACAAGGAACATCCAGTGC+AGG - chr1_1:73878922-73878941 Msa0042940:CDS 50.0%
GACAAGGAACATCCAGTGCA+GGG - chr1_1:73878923-73878942 Msa0042940:CDS 50.0%
GAAACTGGTGGTTGCTCAGA+TGG + chr1_1:73879101-73879120 None:intergenic 50.0%
! GAATGGCCATATGATGGAGG+GGG + chr1_1:73879137-73879156 None:intergenic 50.0%
! GAGGAGGCTGATGATGTGAA+TGG + chr1_1:73879154-73879173 None:intergenic 50.0%
! GATGTTGGCGGGATTTGGTA+TGG + chr1_1:73879179-73879198 None:intergenic 50.0%
! CAGTTGATGTTGGCGGGATT+TGG + chr1_1:73879184-73879203 None:intergenic 50.0%
!! AGGCGGGTTGACCATAATCA+TGG + chr1_1:73879253-73879272 None:intergenic 50.0%
! TGTTGCTGTTGTGGGTGTGT+GGG + chr1_1:73879311-73879330 None:intergenic 50.0%
! TTGTTGCTGTTGTGGGTGTG+TGG + chr1_1:73879312-73879331 None:intergenic 50.0%
! GACCAGGTTGTTGCTGTTGT+GGG + chr1_1:73879319-73879338 None:intergenic 50.0%
TGAGGTGGAGGATATGGAGA+TGG + chr1_1:73879362-73879381 None:intergenic 50.0%
GCTGCTTATAGTAGCCACCT+TGG + chr1_1:73879385-73879404 None:intergenic 50.0%
! AATGTGTGTCGACGTGGCAG+TGG + chr1_1:73872765-73872784 None:intergenic 55.0%
! GAAGGGAATGTGTGTCGACG+TGG + chr1_1:73872771-73872790 None:intergenic 55.0%
GGTGAATGCTAACGTGTGCG+TGG + chr1_1:73872809-73872828 None:intergenic 55.0%
ATTGCGACGCGGCCATGATT+CGG + chr1_1:73872833-73872852 None:intergenic 55.0%
!! GATGTTGGTGTTGCCTACGG+CGG + chr1_1:73872862-73872881 None:intergenic 55.0%
GAGGGGACGGTAGAGATCTA+CGG + chr1_1:73872916-73872935 None:intergenic 55.0%
TGAAAAGGTCACGTCGTGCG+GGG + chr1_1:73873052-73873071 None:intergenic 55.0%
ATCGGAATACCGTTGACGGC+CGG - chr1_1:73873273-73873292 Msa0042940:CDS 55.0%
TGTACTGGACACACCTTCGG+AGG - chr1_1:73873757-73873776 Msa0042940:CDS 55.0%
!! TGTAGCACTGACACCTCCGA+AGG + chr1_1:73873773-73873792 None:intergenic 55.0%
AGTCTCAGCCCTCAGGTAGA+AGG + chr1_1:73873862-73873881 None:intergenic 55.0%
TCATCTCAGTCTCAGCCCTC+AGG + chr1_1:73873869-73873888 None:intergenic 55.0%
GAGGAGATTGCGCGGTTGAA+GGG - chr1_1:73874226-73874245 Msa0042940:intron 55.0%
ACCTCTTCCGGCCTTTGCTA+TGG - chr1_1:73874417-73874436 Msa0042940:intron 55.0%
ACCATAGCAAAGGCCGGAAG+AGG + chr1_1:73874421-73874440 None:intergenic 55.0%
GGCTTCACCATAGCAAAGGC+CGG + chr1_1:73874427-73874446 None:intergenic 55.0%
ATAGTGCCAAGGCTCTCTCC+AGG - chr1_1:73874512-73874531 Msa0042940:intron 55.0%
AGTGTACCTGGAGAGAGCCT+TGG + chr1_1:73874521-73874540 None:intergenic 55.0%
GCAAGCTAGTGAGCTAACCC+GGG - chr1_1:73874585-73874604 Msa0042940:CDS 55.0%
CTAGTGAGCTAACCCGGGTT+AGG - chr1_1:73874590-73874609 Msa0042940:CDS 55.0%
! AGCTAACCCGGGTTAGGCTT+AGG - chr1_1:73874596-73874615 Msa0042940:CDS 55.0%
! GCTAACCCGGGTTAGGCTTA+GGG - chr1_1:73874597-73874616 Msa0042940:CDS 55.0%
! CCGGGTTAGGCTTAGGGAAA+TGG - chr1_1:73874603-73874622 Msa0042940:CDS 55.0%
TGGAGGCTGTCCAGATCAGT+GGG - chr1_1:73874692-73874711 Msa0042940:intron 55.0%
TCTGCAACAACTCCTCGGTC+TGG + chr1_1:73874789-73874808 None:intergenic 55.0%
GACCGAGGAGTTGTTGCAGA+AGG - chr1_1:73874789-73874808 Msa0042940:intron 55.0%
AAGCAAGCTGCGGAGAGTGA+TGG - chr1_1:73874928-73874947 Msa0042940:intron 55.0%
AAGCTGCGGAGAGTGATGGT+AGG - chr1_1:73874932-73874951 Msa0042940:intron 55.0%
ACTTTACCGGACGGGCATCA+AGG + chr1_1:73874999-73875018 None:intergenic 55.0%
CTGCACTTCCAAGTCTGGCA+AGG - chr1_1:73875117-73875136 Msa0042940:intron 55.0%
! ACTCTAGGAGCTCAAAGGGC+TGG - chr1_1:73875928-73875947 Msa0042940:intron 55.0%
TGCACATTGGCACTCTCCCT+CGG - chr1_1:73876780-73876799 Msa0042940:intron 55.0%
GGCTCAAAGTCGACCCTTGT+TGG - chr1_1:73876846-73876865 Msa0042940:intron 55.0%
AACGAGGATGCGGGGAAGAA+TGG + chr1_1:73877261-73877280 None:intergenic 55.0%
CAGAGGAAAACGAGGATGCG+GGG + chr1_1:73877269-73877288 None:intergenic 55.0%
TGCATCACAGCTCCCAAGTG+TGG - chr1_1:73877392-73877411 Msa0042940:CDS 55.0%
ATCACAGCTCCCAAGTGTGG+AGG - chr1_1:73877395-73877414 Msa0042940:CDS 55.0%
GTTCTCAAGGTCTTGCCTGC+AGG + chr1_1:73878694-73878713 None:intergenic 55.0%
GCTCATCCCCCTCCATCATA+TGG - chr1_1:73879128-73879147 Msa0042940:CDS 55.0%
! GGGATTTGGTATGGAGGAGG+AGG + chr1_1:73879170-73879189 None:intergenic 55.0%
! GTTGGCGGGATTTGGTATGG+AGG + chr1_1:73879176-73879195 None:intergenic 55.0%
! TACGGGGCAGTTGATGTTGG+CGG + chr1_1:73879191-73879210 None:intergenic 55.0%
TATGGTCAACCCGCCTATCC+TGG - chr1_1:73879257-73879276 Msa0042940:CDS 55.0%
TAGTATGGAGCACGCCATCC+AGG + chr1_1:73879278-73879297 None:intergenic 55.0%
CACCCACAACAGCAACAACC+TGG - chr1_1:73879314-73879333 Msa0042940:CDS 55.0%
! GGACCAGGTTGTTGCTGTTG+TGG + chr1_1:73879320-73879339 None:intergenic 55.0%
CCTTGGTGAGGTGGAGGATA+TGG + chr1_1:73879368-73879387 None:intergenic 55.0%
CCATATCCTCCACCTCACCA+AGG - chr1_1:73879365-73879384 Msa0042940:CDS 55.0%
TATCCTCCACCTCACCAAGG+TGG - chr1_1:73879368-73879387 Msa0042940:CDS 55.0%
TAGTAGCCACCTTGGTGAGG+TGG + chr1_1:73879377-73879396 None:intergenic 55.0%
TCGCAATCTTCCTCCGCCGT+AGG - chr1_1:73872846-73872865 Msa0042940:three_prime_UTR 60.0%
TCGTGCGGGGAGAGATGGAT+CGG + chr1_1:73873039-73873058 None:intergenic 60.0%
AAGCATGAGAAGCCTGCCGC+CGG + chr1_1:73873295-73873314 None:intergenic 60.0%
! CATGCTTTTATGGCGGCGGC+TGG - chr1_1:73873308-73873327 Msa0042940:CDS 60.0%
GGAGGAGATTGCGCGGTTGA+AGG - chr1_1:73874225-73874244 Msa0042940:intron 60.0%
GTGGAGGCTGTCCAGATCAG+TGG - chr1_1:73874691-73874710 Msa0042940:intron 60.0%
GGAGGCTGTCCAGATCAGTG+GGG - chr1_1:73874693-73874712 Msa0042940:intron 60.0%
GAGGCTGTCCAGATCAGTGG+GGG - chr1_1:73874694-73874713 Msa0042940:intron 60.0%
AGGCTGTCCAGATCAGTGGG+GGG - chr1_1:73874695-73874714 Msa0042940:intron 60.0%
AGAACTGCTGGTCCAGACCG+AGG - chr1_1:73874774-73874793 Msa0042940:intron 60.0%
TACCGGACGGGCATCAAGGA+TGG + chr1_1:73874995-73875014 None:intergenic 60.0%
! GGCGGGATTTGGTATGGAGG+AGG + chr1_1:73879173-73879192 None:intergenic 60.0%
! ACGGGGCAGTTGATGTTGGC+GGG + chr1_1:73879190-73879209 None:intergenic 60.0%
! GGGTACGGGGCAGTTGATGT+TGG + chr1_1:73879194-73879213 None:intergenic 60.0%
! CTGCTGCTGATGGACCTGAG+GGG + chr1_1:73879219-73879238 None:intergenic 60.0%
! GCTGCTGCTGATGGACCTGA+GGG + chr1_1:73879220-73879239 None:intergenic 60.0%
TTGCTGGTGGCTGCTGCTGA+TGG + chr1_1:73879229-73879248 None:intergenic 60.0%
GTCAACCCGCCTATCCTGGA+TGG - chr1_1:73879261-73879280 Msa0042940:CDS 60.0%
AGCACGCCATCCAGGATAGG+CGG + chr1_1:73879270-73879289 None:intergenic 60.0%
TGGAGCACGCCATCCAGGAT+AGG + chr1_1:73879273-73879292 None:intergenic 60.0%
GGAATGGTATAAGGGGGGCG+AGG + chr1_1:73879341-73879360 None:intergenic 60.0%
TAGCCACCTTGGTGAGGTGG+AGG + chr1_1:73879374-73879393 None:intergenic 60.0%
GGCGGAGGAAGATTGCGACG+CGG + chr1_1:73872844-73872863 None:intergenic 65.0%
!! GTTGGTGTTGCCTACGGCGG+AGG + chr1_1:73872859-73872878 None:intergenic 65.0%
TCACGTCGTGCGGGGAGAGA+TGG + chr1_1:73873044-73873063 None:intergenic 65.0%
GGAATACCGTTGACGGCCGG+CGG - chr1_1:73873276-73873295 Msa0042940:CDS 65.0%
GGCCATCCTTGATGCCCGTC+CGG - chr1_1:73874990-73875009 Msa0042940:intron 65.0%
TGGACCTGAGGGGCTGGGTA+CGG + chr1_1:73879209-73879228 None:intergenic 65.0%
! GCTGATGGACCTGAGGGGCT+GGG + chr1_1:73879214-73879233 None:intergenic 65.0%
! TGCTGATGGACCTGAGGGGC+TGG + chr1_1:73879215-73879234 None:intergenic 65.0%
! GGCTGCTGCTGATGGACCTG+AGG + chr1_1:73879221-73879240 None:intergenic 65.0%
GCACGCCATCCAGGATAGGC+GGG + chr1_1:73879269-73879288 None:intergenic 65.0%
GTATAAGGGGGGCGAGGACC+AGG + chr1_1:73879335-73879354 None:intergenic 65.0%
! GCGACGCGGCCATGATTCGG+TGG + chr1_1:73872830-73872849 None:intergenic 70.0%
!! ATGGCGGCGGCTGGCTCGTT+CGG - chr1_1:73873317-73873336 Msa0042940:CDS 70.0%
CAGCAGGCCCCCCACTGATC+TGG + chr1_1:73874705-73874724 None:intergenic 70.0%
CAGATCAGTGGGGGGCCTGC+TGG - chr1_1:73874703-73874722 Msa0042940:intron 70.0%
! CAGTGGGGGGCCTGCTGGTT+TGG - chr1_1:73874708-73874727 Msa0042940:intron 70.0%
GACCTGAGGGGCTGGGTACG+GGG + chr1_1:73879207-73879226 None:intergenic 70.0%
GGACCTGAGGGGCTGGGTAC+GGG + chr1_1:73879208-73879227 None:intergenic 70.0%
TACCGTTGACGGCCGGCGGC+AGG - chr1_1:73873280-73873299 Msa0042940:CDS 75.0%
AGCCTGCCGCCGGCCGTCAA+CGG + chr1_1:73873285-73873304 None:intergenic 75.0%
AAGCTGCGCTGCAGCGCCCC+TGG + chr1_1:73874287-73874306 None:intergenic 75.0%
TGCCCCGTACCCAGCCCCTC+AGG - chr1_1:73879202-73879221 Msa0042940:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 73872697 73879680 73872697 ID=Msa0042940;Name=Msa0042940
chr1_1 mRNA 73872697 73879680 73872697 ID=Msa0042940-mRNA-1;Parent=Msa0042940;Name=Msa0042940-mRNA-1;_AED=0.03;_eAED=0.03;_QI=140|1|1|1|1|1|8|271|872
chr1_1 exon 73872697 73873498 73872697 ID=Msa0042940-mRNA-1:exon:24772;Parent=Msa0042940-mRNA-1
chr1_1 exon 73873680 73873783 73873680 ID=Msa0042940-mRNA-1:exon:24771;Parent=Msa0042940-mRNA-1
chr1_1 exon 73874036 73874084 73874036 ID=Msa0042940-mRNA-1:exon:24770;Parent=Msa0042940-mRNA-1
chr1_1 exon 73874540 73874680 73874540 ID=Msa0042940-mRNA-1:exon:24769;Parent=Msa0042940-mRNA-1
chr1_1 exon 73876393 73876461 73876393 ID=Msa0042940-mRNA-1:exon:24768;Parent=Msa0042940-mRNA-1
chr1_1 exon 73877178 73877267 73877178 ID=Msa0042940-mRNA-1:exon:24767;Parent=Msa0042940-mRNA-1
chr1_1 exon 73877366 73878316 73877366 ID=Msa0042940-mRNA-1:exon:24766;Parent=Msa0042940-mRNA-1
chr1_1 exon 73878857 73879680 73878857 ID=Msa0042940-mRNA-1:exon:24765;Parent=Msa0042940-mRNA-1
chr1_1 five_prime_UTR 73879541 73879680 73879541 ID=Msa0042940-mRNA-1:five_prime_utr;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73878857 73879540 73878857 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73877366 73878316 73877366 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73877178 73877267 73877178 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73876393 73876461 73876393 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73874540 73874680 73874540 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73874036 73874084 73874036 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73873680 73873783 73873680 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 CDS 73872968 73873498 73872968 ID=Msa0042940-mRNA-1:cds;Parent=Msa0042940-mRNA-1
chr1_1 three_prime_UTR 73872697 73872967 73872697 ID=Msa0042940-mRNA-1:three_prime_utr;Parent=Msa0042940-mRNA-1
Gene Sequence

>Msa0042940

ATGGCCGCGTCGCAATCTTCCTCCGCCGTAGGCAACACCAACATCATGCTCGCAATCTTCGAGAAGAAAACAAACACCGTAGATCTCTACCGTCCCCTCCGTAACTATATCGCCTTCCATTACTCTGAACGCGAAGCACAAAACCTCGAAGACGATCTTCAAACCCTAAAACAACTCCGTTCCGACCTTGAACGTCACTCCGATCCATCTCTCCCCGCACGACGTGACCTTTTCATAACCTATTTCAAAGCTCTATGTCAAACCGAAACTCGATTTCCAATTTCATCTGAACCTGATCACGTTAACGCACTCACCTTCGTTTGGTTTGATGCGTTCAAACCGAAACAAAAAGCTTCTCAGCAAAATATTCATCTTGAGAAAGGCGCTGTGTTGTTTAATTTGGCCGCTGTTTACAGTCAGATTGGTTTAACATTTGATCGGAATACCGTTGACGGCCGGCGGCAGGCTTCTCATGCTTTTATGGCGGCGGCTGGCTCGTTCGGTTTTCTTAGAGAGAATGCTTCTATGAAAATCTCGGTTGGAAATTCCACCACTCTTGATTTGTCCGTTGAGTGTGCTGGAATGTTAGAGAAGCTTATGCTTGCTCAAGCTCAAGAATGTGTGTTTGAAAACACTATTGCTAAAGGAAGTACTCCTGGTGTTTGTGCTAAGATCTCTAGGCAGGTTGGGCTGTATTATGAGGAAGCATTGGCTGCACTGAATGTTGCGCCTTTAAGTCAGCATTTCGATAAGTCGTGGATAGTTCATGTGCAATTGAAGACAGCTATTTTCTATGCTGAAGCTTGTTATAGATATGGACTAGAGCTGCATGAGAAAGAGGAAATAGCGGAGGAGATTGCGCGGTTGAAGGGTGCTATTAGTGTGCTTACTGAGGCGAAGAAAAACTCCAGGGGCGCTGCAGCGCAGCTTCTTGATGCGATTAACAAGTTAGAGGCTAATATTAACAGAAACCTTGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACTTGATGAGAGTTCCTCCTGCTAGTTCATTGTCACCTCTTCCGGCCTTTGCTATGGTGAAGCCGATGGTAATGAGTGAGGTGCTGGATGCGAGTAAAGAGAAGATGTTCGCAAGTCTTGTTCCTGACAATAGTGCCAAGGCTCTCTCCAGGTACACTGAAATGGTTGATGGCATTATAAGAACACAGGCTGAGAAGTTGCAGCAAGCTAGTGAGCTAACCCGGGTTAGGCTTAGGGAAATGGAATTGCCGGATTCTATTCTTGCTCTGGAAGGAAATTTTACTCTACCGACAAATCTCAAAGAAGATGTGGAGGCTGTCCAGATCAGTGGGGGGCCTGCTGGTTTGGAATCAGAGTTGCAGCAGCTTAAGGACCTAAGGAGGGTTAATCAAGAACTGCTGGTCCAGACCGAGGAGTTGTTGCAGAAGGAATCAAGAGAAGATGCTCAATTTAGAAGTCAATTCGGCACTAAATGGACTAGGCCTCAGTCAAGCACTTTGACAAAGAATTTGTTGGATAGACTTAATAGGTTTGCAGGTAACTTGAAGCAAGCTGCGGAGAGTGATGGTAGGATTGAGCGTTCAGTTAGAGAACATGCAGCACTGATGGCCATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCAAGTCTGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTATTGTAGGGTCTCTCAAACAAAGCTTGAGGCAACTAGAAACTCTAGGAGCTCAAAGGGCTGGTCTTGAAGACATGCTTAGAGAGATGAAAAGAAAGGATGATATATTGCCCAAGTTGATGACATCCACCGGTTCTTATGAGGATCTTTTTAAAAAGGAGATAGCAAAATATGACCATATTTCTGAAGACATAGCTCAGAATATTGAGGCACAAGAACAACTGTTGCTGCAAATCCAGGCTCAAAATGATGATTTTTCTGTTATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAATCCTACAAGCAGATTGAAGCTGCCATAGCAAAGTTTCGAGAAATAAAGGACAACATCAATGAAGGGTTAAAATTCTATGTTACCCTGCAGGACGCAATCACAAATGTAAAGCAGCAGAGCAATGACTTTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTAGCTGGTTTGAGTTTCCAGGATAAAAACACAGGTGGCTATAACAACAACTACCCTTCAGTGGGAAACCAAAATCAAAGATCCAATACACAAACAGATCCTCGTCCCCAGAATCCTTATTATCAGCCATCTGAGCAACCACCAGTTTCTTCATATGCTCATCCCCCTCCATCATATGGCCATTCACATCATCAGCCTCCTCCTCCATACCAAATCCCGCCAACATCAACTGCCCCGTACCCAGCCCCTCAGGTCCATCAGCAGCAGCCACCAGCAAACCATGATTATGGTCAACCCGCCTATCCTGGATGGCGTGCTCCATACTACAATAATGCACCCACACACCCACAACAGCAACAACCTGGTCCTCGCCCCCCTTATACCATTCCATCTCCATATCCTCCACCTCACCAAGGTGGCTACTATAAGCAGCAATAG
Protein sequence

>Msa0042940

MAASQSSSAVGNTNIMLAIFEKKTNTVDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSDLERHSDPSLPARRDLFITYFKALCQTETRFPISSEPDHVNALTFVWFDAFKPKQKASQQNIHLEKGAVLFNLAAVYSQIGLTFDRNTVDGRRQASHAFMAAAGSFGFLRENASMKISVGNSTTLDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALNVAPLSQHFDKSWIVHVQLKTAIFYAEACYRYGLELHEKEEIAEEIARLKGAISVLTEAKKNSRGAAAQLLDAINKLEANINRNLERAVKENDRVYLMRVPPASSLSPLPAFAMVKPMVMSEVLDASKEKMFASLVPDNSAKALSRYTEMVDGIIRTQAEKLQQASELTRVRLREMELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLESELQQLKDLRRVNQELLVQTEELLQKESREDAQFRSQFGTKWTRPQSSTLTKNLLDRLNRFAGNLKQAAESDGRIERSVREHAALMAILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLREMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHISEDIAQNIEAQEQLLLQIQAQNDDFSVIFNLEDYKASREKSYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQDKNTGGYNNNYPSVGNQNQRSNTQTDPRPQNPYYQPSEQPPVSSYAHPPPSYGHSHHQPPPPYQIPPTSTAPYPAPQVHQQQPPANHDYGQPAYPGWRAPYYNNAPTHPQQQQPGPRPPYTIPSPYPPPHQGGYYKQQ*