AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046070 MtrunA17_Chr1g0213321 98.682 683 0 3 1 681 1 676 0.0 1391
Msa0046070 MtrunA17_Chr7g0214531 85.572 603 78 2 84 681 1 599 0.0 1105
Msa0046070 MtrunA17_Chr1g0146301 71.342 663 179 4 22 680 28 683 0.0 995
Msa0046070 MtrunA17_Chr7g0253211 66.528 720 190 5 1 681 178 885 0.0 985
Msa0046070 MtrunA17_Chr3g0140431 75.125 599 142 3 86 680 2 597 0.0 969
Msa0046070 MtrunA17_Chr8g0340491 70.439 592 165 4 96 680 102 690 0.0 880
Msa0046070 MtrunA17_Chr4g0071031 37.770 278 161 5 124 398 9 277 1.02e-57 202
Msa0046070 MtrunA17_Chr2g0329981 37.770 278 161 5 124 398 9 277 1.45e-57 202
Msa0046070 MtrunA17_Chr1g0166821 38.028 284 162 6 118 398 6 278 1.36e-56 199
Msa0046070 MtrunA17_Chr8g0342821 37.956 274 157 6 124 394 9 272 6.85e-56 197
Msa0046070 MtrunA17_Chr2g0299661 37.050 278 163 5 124 398 9 277 7.77e-56 197
Msa0046070 MtrunA17_Chr7g0261501 37.050 278 163 5 124 398 9 277 1.42e-55 196
Msa0046070 MtrunA17_Chr8g0390211 38.408 289 161 8 114 398 2 277 1.44e-54 192
Msa0046070 MtrunA17_Chr1g0187571 37.676 284 163 6 118 398 6 278 1.88e-54 193
Msa0046070 MtrunA17_Chr6g0486611 37.818 275 157 6 124 394 9 273 4.14e-54 191
Msa0046070 MtrunA17_Chr1g0146151 37.500 280 161 6 118 394 5 273 4.80e-54 191
Msa0046070 MtrunA17_Chr1g0183631 36.268 284 167 6 118 398 5 277 1.54e-53 191
Msa0046070 MtrunA17_Chr3g0140071 35.000 280 168 6 118 394 5 273 1.45e-51 184
Msa0046070 MtrunA17_Chr1g0167261 36.620 284 164 6 116 394 4 276 4.98e-51 181
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046070 AT3G13670.1 73.684 684 158 6 9 680 29 702 0.0 1047
Msa0046070 AT5G18190.2 66.619 701 204 7 1 681 1 691 0.0 969
Msa0046070 AT5G18190.1 66.619 701 204 7 1 681 1 691 0.0 969
Msa0046070 AT2G25760.1 65.657 693 204 7 1 680 1 672 0.0 968
Msa0046070 AT3G03940.1 66.006 706 210 6 1 681 1 701 0.0 964
Msa0046070 AT2G25760.2 65.517 696 203 9 1 680 1 675 0.0 961
Msa0046070 AT3G03930.1 65.833 240 82 0 441 680 48 287 2.12e-117 353
Msa0046070 AT4G28860.2 39.100 289 159 8 114 398 2 277 6.37e-58 201
Msa0046070 AT4G28860.1 39.100 289 159 8 114 398 2 277 2.55e-57 200
Msa0046070 AT4G28880.3 39.100 289 159 8 114 398 2 277 4.88e-57 199
Msa0046070 AT4G28880.2 39.100 289 159 8 114 398 2 277 4.88e-57 199
Msa0046070 AT4G28880.1 39.100 289 159 8 114 398 2 277 4.88e-57 199
Msa0046070 AT4G28880.4 39.100 289 159 8 114 398 2 277 4.88e-57 199
Msa0046070 AT2G19470.1 37.410 278 162 5 124 398 9 277 1.27e-56 199
Msa0046070 AT3G23340.1 38.028 284 162 6 118 398 5 277 1.65e-56 199
Msa0046070 AT4G14340.2 38.380 284 161 6 118 398 11 283 2.69e-56 196
Msa0046070 AT4G14340.1 38.380 284 161 6 118 398 11 283 3.77e-56 198
Msa0046070 AT4G26100.1 36.331 278 165 5 124 398 9 277 7.09e-56 197
Msa0046070 AT5G44100.1 37.324 284 164 6 118 398 5 277 7.44e-56 198
Msa0046070 AT5G44100.2 37.324 284 164 6 118 398 5 277 7.44e-56 198
Msa0046070 AT1G04440.1 38.380 284 161 6 118 398 5 277 1.77e-55 196
Msa0046070 AT1G03930.1 36.268 284 167 6 118 398 5 277 2.22e-55 196
Msa0046070 AT5G43320.1 37.676 284 163 6 118 398 5 277 3.82e-55 196
Msa0046070 AT5G57015.1 35.971 278 166 5 124 398 9 277 9.33e-55 194
Msa0046070 AT5G43320.2 37.676 284 163 6 118 398 5 277 1.36e-54 191
Msa0046070 AT5G43320.3 37.676 284 163 6 118 398 5 277 1.36e-54 191
Msa0046070 AT4G28540.1 36.620 284 166 6 118 398 9 281 2.06e-54 194
Msa0046070 AT1G72710.1 36.331 278 164 6 124 398 9 276 2.57e-54 193
Msa0046070 AT3G23340.2 38.431 255 149 4 147 398 14 263 9.39e-51 182
Msa0046070 AT4G08800.1 31.655 278 146 6 124 398 9 245 4.12e-39 146

Find 225 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCATTATCCCAACGTTTA+TGG 0.104765 1_1:-78085105 None:intergenic
TTCAATTACTATGTTCTCTT+TGG 0.172008 1_1:-78080113 None:intergenic
TGCATGCTTTACTTTGGTTT+TGG 0.213636 1_1:+78085542 Msa0046070:three_prime_UTR
GTCTCGAGAAATTGTTTAAA+AGG 0.213743 1_1:-78082890 None:intergenic
AAAGTAAAGCATGCAATAAA+AGG 0.239062 1_1:-78085534 None:intergenic
CTACCTCTGGTGGCCGGCTT+GGG 0.245833 1_1:-78079986 None:intergenic
CTTCCTTTATAGTGTACTTT+AGG 0.251429 1_1:-78081054 None:intergenic
GGATGATTTGTTGATGTTCT+TGG 0.261556 1_1:-78080032 None:intergenic
GGCGGCGGCTAATCTAGTTC+TGG 0.265053 1_1:-78080011 None:intergenic
GATATAAACTAAATGAATTT+AGG 0.268307 1_1:-78079760 None:intergenic
TGAGCACCTTCAGTATTAAT+TGG 0.274374 1_1:-78083004 None:intergenic
TTCTACATTACTTCTATTGC+AGG 0.285204 1_1:+78083694 Msa0046070:CDS
GCTATACATGAGACCATTTC+AGG 0.290608 1_1:-78081978 None:intergenic
GCGCTTTACCTTTGTTTCAT+TGG 0.295615 1_1:-78083261 None:intergenic
GCCGGCTTGGGTGGCGGAGG+AGG 0.296043 1_1:-78079974 None:intergenic
TTTCTTGTTGACCTTGGTTT+AGG 0.298294 1_1:+78082273 Msa0046070:CDS
CTTCTTGTTTATCCATTTGT+AGG 0.299475 1_1:-78084879 None:intergenic
TCTACCTCTGGTGGCCGGCT+TGG 0.302451 1_1:-78079987 None:intergenic
ATACACTAATCTTCCTTCAT+AGG 0.302617 1_1:+78082671 Msa0046070:CDS
TGCTAGCGTTCATGCTCATT+TGG 0.309315 1_1:+78082606 Msa0046070:CDS
CACAACAGAGCTTCCATTAC+TGG 0.311269 1_1:-78083719 None:intergenic
TTCTTCTCCTGTGCTGTGTT+GGG 0.314845 1_1:-78082246 None:intergenic
CAATCTCTGGGCACTTATAA+TGG 0.319388 1_1:+78083496 Msa0046070:CDS
ATCAACGCCCCGACATGTTT+AGG 0.321666 1_1:+78082438 Msa0046070:CDS
AACAGTAAAGGTTGCAACTA+TGG 0.325296 1_1:+78080653 Msa0046070:CDS
TATCATGTTGTTCCAATCTC+TGG 0.326597 1_1:+78083483 Msa0046070:CDS
TCAATTACTATGTTCTCTTT+GGG 0.327798 1_1:-78080112 None:intergenic
ATGCAGGTTATGGACATTCT+TGG 0.329274 1_1:+78081171 Msa0046070:intron
TCAGAAAGATGTCATATGAT+AGG 0.330996 1_1:-78085452 None:intergenic
ACGGCGGTGGGTCCTCCTCC+TGG 0.337831 1_1:-78080054 None:intergenic
ATCCATAAACGTTGGGATAA+TGG 0.338559 1_1:+78085103 Msa0046070:CDS
ATTGGCCGCAATGCAGGATT+AGG 0.338641 1_1:-78082986 None:intergenic
AAGCTAATATCCTTGTTTGA+TGG 0.338803 1_1:+78082953 Msa0046070:CDS
AAACTTGGTAAAGGTGGATT+TGG 0.339810 1_1:+78080459 Msa0046070:CDS
CTGTGCGCCCATAGCACAAA+TGG 0.345836 1_1:-78085368 None:intergenic
TTTGTTTGAATCAATAAATA+GGG 0.356023 1_1:-78079790 None:intergenic
ATCTTGCCCATTTGTGCTAT+GGG 0.356482 1_1:+78085361 Msa0046070:CDS
AGCACAAATGGGCAAGATAA+AGG 0.360045 1_1:-78085356 None:intergenic
TCTCCTGTGCTGTGTTGGGC+TGG 0.366766 1_1:-78082242 None:intergenic
TTTCTTCTCCTGTGCTGTGT+TGG 0.372909 1_1:-78082247 None:intergenic
CATCACCAGGTCTGTTCCTC+GGG 0.373424 1_1:-78085183 None:intergenic
TGGGAAGAACTGCCAGTAGA+AGG 0.375365 1_1:+78082626 Msa0046070:CDS
GATATTAGCTTGGAATAGTT+AGG 0.378909 1_1:-78082941 None:intergenic
GTGGCCGGCTTGGGTGGCGG+AGG 0.380088 1_1:-78079977 None:intergenic
TATACAACAGAGAACAAATA+TGG 0.382727 1_1:-78085497 None:intergenic
TATCTTGCCCATTTGTGCTA+TGG 0.384054 1_1:+78085360 Msa0046070:CDS
TTCTTCGCAGGAATGGATCT+TGG 0.387340 1_1:+78083654 Msa0046070:intron
CTTGAAAAGTTGCATGCAAA+AGG 0.389023 1_1:+78082020 Msa0046070:CDS
CCCCTTGCAAACTAAATTCA+AGG 0.395785 1_1:-78079685 None:intergenic
CCTCTGGTGGCCGGCTTGGG+TGG 0.397147 1_1:-78079983 None:intergenic
CATTATAAGTGCCCAGAGAT+TGG 0.398095 1_1:-78083495 None:intergenic
ATACCTAAAGTACACTATAA+AGG 0.399245 1_1:+78081051 Msa0046070:CDS
CTGGTGGCCGGCTTGGGTGG+CGG 0.399453 1_1:-78079980 None:intergenic
GCTAGCGTTCATGCTCATTT+GGG 0.400502 1_1:+78082607 Msa0046070:CDS
TTCCTTTCTACCTTGTATAG+AGG 0.401858 1_1:-78080438 None:intergenic
ATTTCCCAGCGCTCATGTTA+AGG 0.404732 1_1:+78085234 Msa0046070:CDS
AAGAAGGGTGAGTTGAGAAA+TGG 0.409422 1_1:-78079737 None:intergenic
GTTTAGGATGTCTCCTGAAA+TGG 0.410442 1_1:+78081965 Msa0046070:intron
GTCCAAGTTTGTGGGATGTA+TGG 0.415770 1_1:+78081193 Msa0046070:CDS
AACGTTGGGATAATGGTTAT+AGG 0.420827 1_1:+78085110 Msa0046070:CDS
TTCTTGTTTATCCATTTGTA+GGG 0.425761 1_1:-78084878 None:intergenic
GGTTCAACAACGAAAGTATC+AGG 0.427084 1_1:-78080088 None:intergenic
GGAGAAGGAGCAGCAGGACG+AGG 0.428945 1_1:-78079953 None:intergenic
GGATGCTGGAACTAATTATT+CGG 0.431973 1_1:+78083517 Msa0046070:CDS
AAAGAAAACCTAAACATGTC+GGG 0.437751 1_1:-78082446 None:intergenic
TCATCACCAGGTCTGTTCCT+CGG 0.440307 1_1:-78085184 None:intergenic
ACTGAAATCCATTGCGAAGC+AGG 0.440885 1_1:-78083222 None:intergenic
GTCACCTCAATGGGTACTGC+TGG 0.441323 1_1:+78084920 Msa0046070:CDS
CTGAAGAGACTTGTGCCAGC+AGG 0.443325 1_1:+78085471 Msa0046070:three_prime_UTR
TTGGTAGGTTGGGCAAAAGC+GGG 0.446903 1_1:+78083137 Msa0046070:intron
CTAAATGAATTTAGGAAGAA+GGG 0.447143 1_1:-78079752 None:intergenic
GCGGCGGCTAATCTAGTTCT+GGG 0.447476 1_1:-78080010 None:intergenic
ACATTCTTGGTCCAAGTTTG+TGG 0.448210 1_1:+78081184 Msa0046070:CDS
CATCATTATCATCGATTGCA+TGG 0.449232 1_1:+78079891 Msa0046070:five_prime_UTR
TACACTAATCTTCCTTCATA+GGG 0.452878 1_1:+78082672 Msa0046070:CDS
TTCCATACATCCCACAAACT+TGG 0.453446 1_1:-78081195 None:intergenic
TGGGTACTGCTGGAAATCGC+TGG 0.454321 1_1:+78084930 Msa0046070:CDS
TACCTTGAATTTAGTTTGCA+AGG 0.455109 1_1:+78079683 Msa0046070:five_prime_UTR
GTATTAATTGGCCGCAATGC+AGG 0.457850 1_1:-78082992 None:intergenic
AGAAATTGTTTAAAAGGAGC+GGG 0.458134 1_1:-78082884 None:intergenic
CGTTTATGGATGCCTTCACT+TGG 0.459779 1_1:-78085091 None:intergenic
TAATACTGAAGGTGCTCAAA+AGG 0.460450 1_1:+78083009 Msa0046070:CDS
GCGAATCTTTCCCCTACAAA+TGG 0.461534 1_1:+78084867 Msa0046070:CDS
TCTAGTTCTGGGTCTACCTC+TGG 0.461838 1_1:-78079999 None:intergenic
ACTAAATGAATTTAGGAAGA+AGG 0.461866 1_1:-78079753 None:intergenic
TACTTTGTCTATTAGGGTGA+TGG 0.463887 1_1:+78082797 Msa0046070:intron
GGAATGGATCTTGGAACAAT+GGG 0.467089 1_1:+78083663 Msa0046070:intron
GGAGGAGGAGAAGGAGCAGC+AGG 0.469679 1_1:-78079959 None:intergenic
GGAGAGTTGGCATCTTCCTC+GGG 0.472733 1_1:-78080229 None:intergenic
CGCCTCTATACAAGGTAGAA+AGG 0.473354 1_1:+78080436 Msa0046070:CDS
AAGTAACTAAGTACCCTCTC+TGG 0.474530 1_1:-78080259 None:intergenic
AAACATACCTCGACGGCTCC+TGG 0.474817 1_1:-78080519 None:intergenic
TCCTCCTCCGCCACCCAAGC+CGG 0.474980 1_1:+78079973 Msa0046070:CDS
AAGGGTGAGTTGAGAAATGG+AGG 0.476311 1_1:-78079734 None:intergenic
TTGTATACTTGCCACTCATA+AGG 0.480559 1_1:-78080680 None:intergenic
CAACGCTGGATTCAGTGATC+AGG 0.480740 1_1:+78084970 Msa0046070:CDS
CATTCTTGGTCCAAGTTTGT+GGG 0.483498 1_1:+78081185 Msa0046070:CDS
TTGGGTGGCGGAGGAGGAGA+AGG 0.483624 1_1:-78079968 None:intergenic
CCCTACCTTAACATGAGCGC+TGG 0.483998 1_1:-78085239 None:intergenic
GAAGAAGCTGTTGGTGTGAT+GGG 0.484651 1_1:+78080154 Msa0046070:CDS
TACAGCAACTGCAGCTACAT+TGG 0.486190 1_1:+78085135 Msa0046070:CDS
TGGAGAGTTGGCATCTTCCT+CGG 0.487318 1_1:-78080230 None:intergenic
CGGCGGTGGGTCCTCCTCCT+GGG 0.489758 1_1:-78080053 None:intergenic
AGCACCCTTGGTGGTAGTCA+TGG 0.498708 1_1:+78081027 Msa0046070:intron
TCCTTGTTTGATGGTATGCT+CGG 0.499312 1_1:+78082962 Msa0046070:CDS
GAGAAATTGTTTAAAAGGAG+CGG 0.500852 1_1:-78082885 None:intergenic
CAGAAAGATGTCATATGATA+GGG 0.501099 1_1:-78085451 None:intergenic
GTTGAGAAATGGAGGCAGGC+AGG 0.501218 1_1:-78079726 None:intergenic
ACCTTGAATTTAGTTTGCAA+GGG 0.504916 1_1:+78079684 Msa0046070:five_prime_UTR
ATCATGTTGTTCCAATCTCT+GGG 0.505022 1_1:+78083484 Msa0046070:CDS
ATTTAATTTCTGCAGGTACA+AGG 0.506190 1_1:+78084819 Msa0046070:intron
ATCAAACAAGGATATTAGCT+TGG 0.507292 1_1:-78082951 None:intergenic
TACAAGGTAGAAAGGAAACT+TGG 0.508090 1_1:+78080444 Msa0046070:CDS
GAAAGGAAACTTGGTAAAGG+TGG 0.508224 1_1:+78080453 Msa0046070:CDS
AGAAGAAGCTGTTGGTGTGA+TGG 0.513367 1_1:+78080153 Msa0046070:CDS
AAATTGTTTCTTGTTGACCT+TGG 0.513818 1_1:+78082267 Msa0046070:CDS
GGGTACTGCTGGAAATCGCT+GGG 0.513888 1_1:+78084931 Msa0046070:CDS
AGAAATGGAGGCAGGCAGGC+AGG 0.514399 1_1:-78079722 None:intergenic
TGAAGGCATCCATAAACGTT+GGG 0.514683 1_1:+78085096 Msa0046070:CDS
TGGTAAAGGTGGATTTGGCC+AGG 0.515374 1_1:+78080464 Msa0046070:CDS
ATTACTATGTTCTCTTTGGG+AGG 0.521147 1_1:-78080109 None:intergenic
TTCCATCAGCCACATTGTAA+TGG 0.521580 1_1:-78083406 None:intergenic
CTCTGGAAGAGGTGGAGAGT+TGG 0.521791 1_1:-78080242 None:intergenic
TTCAAGATCATCCCTTCTAC+TGG 0.523197 1_1:-78082638 None:intergenic
GTTTCCTGAGTTTCATCACC+AGG 0.525100 1_1:-78085196 None:intergenic
GTTCATTATAGTTATGTACA+TGG 0.527173 1_1:+78082189 Msa0046070:intron
CAGGGATTCCTGCTTCGCAA+TGG 0.528640 1_1:+78083214 Msa0046070:CDS
TCTATTGCAGGGGCCAGTAA+TGG 0.529630 1_1:+78083706 Msa0046070:CDS
AAGTAAAGCATGCAATAAAA+GGG 0.529889 1_1:-78085533 None:intergenic
ATCATTATCATCGATTGCAT+GGG 0.530197 1_1:+78079892 Msa0046070:five_prime_UTR
CTAAGTACCCTCTCTGGAAG+AGG 0.531740 1_1:-78080253 None:intergenic
ATTGTTATGTCTCGCAACGC+TGG 0.532120 1_1:+78084956 Msa0046070:CDS
TACCATTACAATGTGGCTGA+TGG 0.532605 1_1:+78083404 Msa0046070:CDS
TCTACATTACTTCTATTGCA+GGG 0.533747 1_1:+78083695 Msa0046070:CDS
ACAAATGGATAAACAAGAAG+TGG 0.535275 1_1:+78084882 Msa0046070:CDS
ATGGCAATCGACCCCTATGA+AGG 0.535810 1_1:-78082684 None:intergenic
GTGAGTTGAGAAATGGAGGC+AGG 0.536298 1_1:-78079730 None:intergenic
CAATTAATTTCTGATGGCAA+AGG 0.536420 1_1:-78085402 None:intergenic
TGTTGTGTCAAAAGCACCCT+TGG 0.537417 1_1:+78081015 Msa0046070:intron
AGGAATGGATCTTGGAACAA+TGG 0.539816 1_1:+78083662 Msa0046070:intron
TCTGTTGTGGTGATGTCAAA+AGG 0.540053 1_1:+78083733 Msa0046070:CDS
TCTCAGTGCTAATAAAGATA+AGG 0.542097 1_1:+78080192 Msa0046070:CDS
CGTGAGCGTGCAAATGCACC+AGG 0.542739 1_1:+78080501 Msa0046070:CDS
CTGGGTCTACCTCTGGTGGC+CGG 0.543507 1_1:-78079992 None:intergenic
AAGTGGAAAGTCTGTGTAGA+GGG 0.544481 1_1:+78079658 Msa0046070:five_prime_UTR
GGTTGTAATAACAACGGCGG+TGG 0.545020 1_1:-78080067 None:intergenic
ATAAACAAGAAGTGGAAAGA+AGG 0.546623 1_1:+78084890 Msa0046070:CDS
TGATTTGTTGATGTTCTTGG+CGG 0.547100 1_1:-78080029 None:intergenic
TAAAGAAAACCTAAACATGT+CGG 0.548421 1_1:-78082447 None:intergenic
TTGAAAAGTTGCATGCAAAA+GGG 0.550394 1_1:+78082021 Msa0046070:CDS
TTTGAACATAGAAACAGTAA+AGG 0.551586 1_1:+78080641 Msa0046070:CDS
TGGGCACTTATAATGGATGC+TGG 0.551892 1_1:+78083503 Msa0046070:CDS
TGTGCGCCCATAGCACAAAT+GGG 0.560138 1_1:-78085367 None:intergenic
TTTGGTAGGTTGGGCAAAAG+CGG 0.560454 1_1:+78083136 Msa0046070:intron
TGGGATGTATGGAATACCTC+AGG 0.561689 1_1:+78081204 Msa0046070:CDS
TTTGATAAAGCAGCAGCGTA+TGG 0.561987 1_1:+78079861 Msa0046070:five_prime_UTR
TTCATAGGGGTCGATTGCCA+TGG 0.565345 1_1:+78082686 Msa0046070:CDS
ATGATACACAGCTAATAAGA+AGG 0.568771 1_1:-78083466 None:intergenic
TTTGTTGATGTTCTTGGCGG+CGG 0.570338 1_1:-78080026 None:intergenic
TGAAGAGACTTGTGCCAGCA+GGG 0.571021 1_1:+78085472 Msa0046070:three_prime_UTR
AAGTGGAAAGATTCGTCAAG+TGG 0.575587 1_1:+78082398 Msa0046070:CDS
CATAACTCACAGCAACAAAG+TGG 0.578338 1_1:+78082381 Msa0046070:intron
AGGAGGATCGCCTCTATACA+AGG 0.578673 1_1:+78080428 Msa0046070:CDS
GGCTGTTGCTGCTGTTCCCG+AGG 0.579260 1_1:+78080213 Msa0046070:CDS
GGGAAGAACTGCCAGTAGAA+GGG 0.581850 1_1:+78082627 Msa0046070:CDS
CTCTCCACCTCTTCCAGAGA+GGG 0.581918 1_1:+78080246 Msa0046070:CDS
GTAGAAAGGAAACTTGGTAA+AGG 0.586481 1_1:+78080450 Msa0046070:CDS
TTAGATAAGAAATATCTAAG+TGG 0.586508 1_1:+78079641 None:intergenic
GAACAAATATGGTTCCCTGC+TGG 0.586957 1_1:-78085486 None:intergenic
ATTCACAATCGTGATAACTC+TGG 0.590979 1_1:-78085703 None:intergenic
ATTTCCAGCAGTACCCATTG+AGG 0.592136 1_1:-78084924 None:intergenic
AGGGGTCGATTGCCATGGCA+AGG 0.592938 1_1:+78082691 Msa0046070:CDS
AGGCCAGCCCAACACAGCAC+AGG 0.593138 1_1:+78082239 Msa0046070:CDS
CCTTGAATTTAGTTTGCAAG+GGG 0.593144 1_1:+78079685 Msa0046070:five_prime_UTR
ACAAGGAGAATATTATGTGA+TGG 0.595744 1_1:+78081077 Msa0046070:CDS
CTACATTACTTCTATTGCAG+GGG 0.596116 1_1:+78083696 Msa0046070:CDS
CCACCCAAGCCGGCCACCAG+AGG 0.596199 1_1:+78079983 Msa0046070:CDS
GTGAAGGCATCCATAAACGT+TGG 0.598118 1_1:+78085095 Msa0046070:CDS
CAGACCTGGTGATGAAACTC+AGG 0.603132 1_1:+78085192 Msa0046070:CDS
CAACAAATCATCCCAGGAGG+AGG 0.604886 1_1:+78080042 Msa0046070:CDS
GAACATCAACAAATCATCCC+AGG 0.605407 1_1:+78080036 Msa0046070:CDS
TATACTTGCCACTCATAAGG+AGG 0.605547 1_1:-78080677 None:intergenic
TAGCACAGCATATTGAGAGA+GGG 0.605693 1_1:+78083432 Msa0046070:CDS
CCTACCTTAACATGAGCGCT+GGG 0.608481 1_1:-78085238 None:intergenic
TGGTAGGTTGGGCAAAAGCG+GGG 0.609732 1_1:+78083138 Msa0046070:intron
TTGCGGCCAATTAATACTGA+AGG 0.613238 1_1:+78082998 Msa0046070:CDS
AGTACCCTCTCTGGAAGAGG+TGG 0.614975 1_1:-78080250 None:intergenic
TCTTGTTTATCCATTTGTAG+GGG 0.617352 1_1:-78084877 None:intergenic
CGCTTATATTAAGCATCCCG+AGG 0.618789 1_1:+78085167 Msa0046070:CDS
TAAACAATTTCTCGAGACTG+TGG 0.620421 1_1:+78082895 Msa0046070:CDS
CTAGACAACCAATGAAACAA+AGG 0.626026 1_1:+78083253 Msa0046070:CDS
AGTTCTGGGTCTACCTCTGG+TGG 0.628657 1_1:-78079996 None:intergenic
TTAGCACAGCATATTGAGAG+AGG 0.629146 1_1:+78083431 Msa0046070:CDS
CAGTAATGGAAGCTCTGTTG+TGG 0.630181 1_1:+78083720 Msa0046070:CDS
TGTGTCAAAAGCACCCTTGG+TGG 0.632127 1_1:+78081018 Msa0046070:intron
GTTGTAATAACAACGGCGGT+GGG 0.636640 1_1:-78080066 None:intergenic
TAAGTGGAAAGTCTGTGTAG+AGG 0.636982 1_1:+78079657 Msa0046070:five_prime_UTR
TATTCCATGACTACCACCAA+GGG 0.640889 1_1:-78081031 None:intergenic
AGCATCCCGAGGAACAGACC+TGG 0.642592 1_1:+78085178 Msa0046070:CDS
AAGAAAACCTAAACATGTCG+GGG 0.643052 1_1:-78082445 None:intergenic
GAAATTGTTTAAAAGGAGCG+GGG 0.650034 1_1:-78082883 None:intergenic
AAATGCACCAGGAGCCGTCG+AGG 0.664220 1_1:+78080512 Msa0046070:CDS
GTACACTATAAAGGAAGACA+AGG 0.671240 1_1:+78081060 Msa0046070:CDS
GCGGGGTAGATTGAATGTTG+AGG 0.672164 1_1:+78083155 Msa0046070:CDS
ACTATGGCCCTCCTTATGAG+TGG 0.673706 1_1:+78080669 Msa0046070:CDS
AGAATGCCTCAGCTTCGTAG+TGG 0.674178 1_1:+78079920 Msa0046070:exon
ATACTTGCCACTCATAAGGA+GGG 0.674859 1_1:-78080676 None:intergenic
TCCGAGCATACCATCAAACA+AGG 0.675450 1_1:-78082963 None:intergenic
AAAAGAGAAACATACCTCGA+CGG 0.677481 1_1:-78080526 None:intergenic
ACTCTCCACCTCTTCCAGAG+AGG 0.678361 1_1:+78080245 Msa0046070:CDS
ACACTAATCTTCCTTCATAG+GGG 0.679283 1_1:+78082673 Msa0046070:CDS
GTGCATTTGCACGCTCACGA+CGG 0.682084 1_1:-78080497 None:intergenic
TTATACTCACGACTGGCCTG+AGG 0.682870 1_1:-78081220 None:intergenic
GTATCAGGTTGTAATAACAA+CGG 0.689192 1_1:-78080073 None:intergenic
CTTGAATTTAGTTTGCAAGG+GGG 0.690483 1_1:+78079686 Msa0046070:five_prime_UTR
CGAACACCACTACGAAGCTG+AGG 0.690566 1_1:-78079926 None:intergenic
GCATCCACTAACCTAAACCA+AGG 0.698911 1_1:-78082284 None:intergenic
TGTACCTGAAAACCTTGCCA+TGG 0.702475 1_1:-78082703 None:intergenic
GTATTCCATGACTACCACCA+AGG 0.709926 1_1:-78081032 None:intergenic
GTGATGGGTGATGAAAGAGT+TGG 0.715379 1_1:+78080169 Msa0046070:CDS
GGTACTGCTGGAAATCGCTG+GGG 0.715640 1_1:+78084932 Msa0046070:CDS
CATCAACAAATCATCCCAGG+AGG 0.739128 1_1:+78080039 Msa0046070:CDS
TCAGGTTGTAATAACAACGG+CGG 0.757049 1_1:-78080070 None:intergenic
TCGGACCTAATCCTGCATTG+CGG 0.788069 1_1:+78082981 Msa0046070:CDS
TTGTAGGTACCATTACAATG+TGG 0.824443 1_1:+78083397 Msa0046070:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATACAAATTTATTTTTGAA+TGG - chr1_1:78082309-78082328 None:intergenic 10.0%
!! GTCTTTATATTTAAAAAATA+TGG - chr1_1:78084289-78084308 None:intergenic 10.0%
!! ATTAATTGAAAAAAGAATTA+TGG + chr1_1:78085417-78085436 Msa0046070:three_prime_UTR 10.0%
!! GATATAAACTAAATGAATTT+AGG - chr1_1:78079763-78079782 None:intergenic 15.0%
!! TTTGTTTGAATCAATAAATA+GGG - chr1_1:78079793-78079812 None:intergenic 15.0%
!!! TTTTGTTTGAATCAATAAAT+AGG - chr1_1:78079794-78079813 None:intergenic 15.0%
!!! GATTTTTATTTCAATTTTGA+AGG + chr1_1:78080398-78080417 Msa0046070:intron 15.0%
!! TTGTATTAAAAATGGAAATT+AGG - chr1_1:78081526-78081545 None:intergenic 15.0%
!! GAATAAGAAAAAGATTATAA+AGG - chr1_1:78081822-78081841 None:intergenic 15.0%
!!! AAGTAAAATTTGAAACATAA+TGG - chr1_1:78082782-78082801 None:intergenic 15.0%
!!! AAATTTTACTTTGTCTATTA+GGG + chr1_1:78082791-78082810 Msa0046070:intron 15.0%
!! TGGTATAAATTTCTATTTAA+TGG - chr1_1:78084188-78084207 None:intergenic 15.0%
!! GAAAAACAAAGAAAAATTAT+AGG - chr1_1:78084624-78084643 None:intergenic 15.0%
!!! TTTTTTCAATTAATTTCTGA+TGG - chr1_1:78085411-78085430 None:intergenic 15.0%
!! ACACATAAAAAAGATAAAAT+TGG - chr1_1:78085631-78085650 None:intergenic 15.0%
!!! ATTTCTATTTTTCATTTCTC+AGG + chr1_1:78080607-78080626 Msa0046070:intron 20.0%
!! AACAAAATAATGTAGAAAGA+GGG - chr1_1:78080713-78080732 None:intergenic 20.0%
!! TAACAAAATAATGTAGAAAG+AGG - chr1_1:78080714-78080733 None:intergenic 20.0%
!! GTATAAACTTAATTGTATCT+TGG + chr1_1:78081237-78081256 Msa0046070:intron 20.0%
!!! CAGTTTTACTATATTACTTT+TGG + chr1_1:78081476-78081495 Msa0046070:intron 20.0%
!! GTAGTTCTTTGTATTAAAAA+TGG - chr1_1:78081534-78081553 None:intergenic 20.0%
!! AAACTATAAGAGAAACTATT+AGG - chr1_1:78081750-78081769 None:intergenic 20.0%
!!! TTTTTGTTTGACAAATGTTT+AGG + chr1_1:78081949-78081968 Msa0046070:intron 20.0%
!!! GTAAAACATTCTAAAATTTG+TGG - chr1_1:78082107-78082126 None:intergenic 20.0%
!! ACATAACTATAATGAACAAA+AGG - chr1_1:78082186-78082205 None:intergenic 20.0%
!! TAATATGAAAAAAATGCAAG+GGG - chr1_1:78082496-78082515 None:intergenic 20.0%
!! GTAATATGAAAAAAATGCAA+GGG - chr1_1:78082497-78082516 None:intergenic 20.0%
!! AGTAATATGAAAAAAATGCA+AGG - chr1_1:78082498-78082517 None:intergenic 20.0%
!!! TCTTTGTCTTTTTATATAGA+GGG + chr1_1:78082572-78082591 Msa0046070:intron 20.0%
!!! CAAATTTTACTTTGTCTATT+AGG + chr1_1:78082790-78082809 Msa0046070:intron 20.0%
!!! AACAATATTACTTTTTGCAA+CGG + chr1_1:78083766-78083785 Msa0046070:intron 20.0%
!!! AAAAAAAGTATTAACCTGAA+CGG + chr1_1:78084012-78084031 Msa0046070:intron 20.0%
!! AAAGATTTAGCAAATATAAC+CGG - chr1_1:78084123-78084142 None:intergenic 20.0%
!!! ATCTTTGATATTTTAATGAC+TGG + chr1_1:78084137-78084156 Msa0046070:intron 20.0%
!!! GCAATCTATTATTTTAAGAA+GGG - chr1_1:78084163-78084182 None:intergenic 20.0%
!! CTTCTTAAAATAATAGATTG+CGG + chr1_1:78084162-78084181 Msa0046070:intron 20.0%
!!! TGATTTATGATAAAGCATTA+TGG - chr1_1:78084550-78084569 None:intergenic 20.0%
!! GAAAATATTTCAATTTCTGA+AGG + chr1_1:78084744-78084763 Msa0046070:intron 20.0%
!! GAAAATAGAATACAAAACAA+CGG - chr1_1:78085000-78085019 None:intergenic 20.0%
! CTAAATGAATTTAGGAAGAA+GGG - chr1_1:78079755-78079774 None:intergenic 25.0%
! ACTAAATGAATTTAGGAAGA+AGG - chr1_1:78079756-78079775 None:intergenic 25.0%
! TCAATTACTATGTTCTCTTT+GGG - chr1_1:78080115-78080134 None:intergenic 25.0%
! TTCAATTACTATGTTCTCTT+TGG - chr1_1:78080116-78080135 None:intergenic 25.0%
!!! ATGCTTTGTTAGTGTTTTTA+AGG + chr1_1:78080293-78080312 Msa0046070:intron 25.0%
!! TATGTTTCTCTTTTTACATC+TGG + chr1_1:78080535-78080554 Msa0046070:intron 25.0%
! AAAATAGAAATGAACTCACA+AGG - chr1_1:78080598-78080617 None:intergenic 25.0%
! TTTGAACATAGAAACAGTAA+AGG + chr1_1:78080641-78080660 Msa0046070:CDS 25.0%
! ATACCTAAAGTACACTATAA+AGG + chr1_1:78081051-78081070 Msa0046070:CDS 25.0%
! AAATGGTTGAATTGTTAAGT+TGG - chr1_1:78081144-78081163 None:intergenic 25.0%
! ACCTATGTGTATTATAACAA+AGG + chr1_1:78081299-78081318 Msa0046070:intron 25.0%
!! TCCTTTGTTATAATACACAT+AGG - chr1_1:78081303-78081322 None:intergenic 25.0%
! AAGATCTATTTATTGTACTC+TGG + chr1_1:78081561-78081580 Msa0046070:intron 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr1_1:78081693-78081712 None:intergenic 25.0%
! AGATTTAGAAATCAATGAGT+TGG - chr1_1:78081725-78081744 None:intergenic 25.0%
! TTATAAAGGCAAAAAAAGCA+CGG - chr1_1:78081808-78081827 None:intergenic 25.0%
! CAATTCTAGTATAATCAACT+CGG - chr1_1:78081883-78081902 None:intergenic 25.0%
!!! AACATTCTAAAATTTGTGGT+AGG - chr1_1:78082103-78082122 None:intergenic 25.0%
! GTTCATTATAGTTATGTACA+TGG + chr1_1:78082189-78082208 Msa0046070:intron 25.0%
! TAAAGAAAACCTAAACATGT+CGG - chr1_1:78082450-78082469 None:intergenic 25.0%
! AATATGAAAAAAATGCAAGG+GGG - chr1_1:78082495-78082514 None:intergenic 25.0%
!! CTCTTTGTCTTTTTATATAG+AGG + chr1_1:78082571-78082590 Msa0046070:intron 25.0%
!! TACATTTTTATATGCTTACC+AGG + chr1_1:78082726-78082745 Msa0046070:intron 25.0%
!!! CTTATTTTTCTTTCCCTTTT+TGG + chr1_1:78083066-78083085 Msa0046070:intron 25.0%
!! ATATATGATTTCTGGACTAA+AGG - chr1_1:78083307-78083326 None:intergenic 25.0%
! TTTCATGCATATATGATTTC+TGG - chr1_1:78083315-78083334 None:intergenic 25.0%
! GAAATCATATATGCATGAAA+AGG + chr1_1:78083315-78083334 Msa0046070:intron 25.0%
!!! ATCACCATTATTTTTACACA+AGG + chr1_1:78083556-78083575 Msa0046070:CDS 25.0%
!!! ACAATATTACTTTTTGCAAC+GGG + chr1_1:78083767-78083786 Msa0046070:intron 25.0%
!!! ATTGACTTTGTTGATTTTTC+TGG + chr1_1:78083792-78083811 Msa0046070:intron 25.0%
! TACAATGTTATCCAATATCT+TGG + chr1_1:78083821-78083840 Msa0046070:intron 25.0%
! AAAGAAATTCTCCAAGATAT+TGG - chr1_1:78083835-78083854 None:intergenic 25.0%
! ATATCTTGGAGAATTTCTTT+AGG + chr1_1:78083835-78083854 Msa0046070:intron 25.0%
! TTTGTTCATATTGAAACTCA+AGG - chr1_1:78083963-78083982 None:intergenic 25.0%
! ACAAATTAACATGCTAACAT+TGG + chr1_1:78083978-78083997 Msa0046070:intron 25.0%
!!! CGCAATCTATTATTTTAAGA+AGG - chr1_1:78084164-78084183 None:intergenic 25.0%
! ACCATCAAAAAAAACTTAAG+AGG - chr1_1:78084597-78084616 None:intergenic 25.0%
! TTAAAAATCAGAAAAAGCCT+AGG - chr1_1:78084695-78084714 None:intergenic 25.0%
! TTTAATCTGAATTACCATAC+TGG + chr1_1:78084710-78084729 Msa0046070:intron 25.0%
!! TATTTCCTCTGATTTTGTTA+GGG + chr1_1:78084791-78084810 Msa0046070:intron 25.0%
!! TTCTTGTTTATCCATTTGTA+GGG - chr1_1:78084881-78084900 None:intergenic 25.0%
! TATACAACAGAGAACAAATA+TGG - chr1_1:78085500-78085519 None:intergenic 25.0%
! AAGTAAAGCATGCAATAAAA+GGG - chr1_1:78085536-78085555 None:intergenic 25.0%
! AAAGTAAAGCATGCAATAAA+AGG - chr1_1:78085537-78085556 None:intergenic 25.0%
!! TTTTATTGCATGCTTTACTT+TGG + chr1_1:78085536-78085555 Msa0046070:three_prime_UTR 25.0%
!!! TTTACTTTGGTTTTGGAATT+CGG + chr1_1:78085549-78085568 Msa0046070:three_prime_UTR 25.0%
!! TACCTTGAATTTAGTTTGCA+AGG + chr1_1:78079683-78079702 Msa0046070:five_prime_UTR 30.0%
!! ACCTTGAATTTAGTTTGCAA+GGG + chr1_1:78079684-78079703 Msa0046070:five_prime_UTR 30.0%
! ATCATTATCATCGATTGCAT+GGG + chr1_1:78079892-78079911 Msa0046070:five_prime_UTR 30.0%
! GTATCAGGTTGTAATAACAA+CGG - chr1_1:78080076-78080095 None:intergenic 30.0%
TCTCAGTGCTAATAAAGATA+AGG + chr1_1:78080192-78080211 Msa0046070:CDS 30.0%
TTAGTGTTCTTAACGACTTA+TGG + chr1_1:78080376-78080395 Msa0046070:intron 30.0%
!! TCAATTTTGAAGGTTCAAGT+AGG + chr1_1:78080408-78080427 Msa0046070:intron 30.0%
AACATAAACAAACACAAGAG+AGG - chr1_1:78080561-78080580 None:intergenic 30.0%
GTTTATGTTACCTTCTGATT+TGG + chr1_1:78080572-78080591 Msa0046070:intron 30.0%
ATTAAGAACTAACAACAACC+CGG - chr1_1:78080952-78080971 None:intergenic 30.0%
CTTCCTTTATAGTGTACTTT+AGG - chr1_1:78081057-78081076 None:intergenic 30.0%
ACAAGGAGAATATTATGTGA+TGG + chr1_1:78081077-78081096 Msa0046070:CDS 30.0%
!!! ATAGTACGGTGTTTGTTTTA+TGG - chr1_1:78081114-78081133 None:intergenic 30.0%
!! TGAATTGTTAAGTTGGCAAT+GGG - chr1_1:78081137-78081156 None:intergenic 30.0%
!! TTGAATTGTTAAGTTGGCAA+TGG - chr1_1:78081138-78081157 None:intergenic 30.0%
ATTAAGTTTATACTCACGAC+TGG - chr1_1:78081230-78081249 None:intergenic 30.0%
!! TAGCTCTTGCTTTGTTTATA+GGG + chr1_1:78081271-78081290 Msa0046070:intron 30.0%
! ATTGATTTCTTCCAAAGACA+TGG + chr1_1:78081396-78081415 Msa0046070:intron 30.0%
TATTCACTTAACCATGTCTT+TGG - chr1_1:78081410-78081429 None:intergenic 30.0%
TATACTTTAATTGTCTCCGA+CGG + chr1_1:78081591-78081610 Msa0046070:intron 30.0%
ATGTTCAAAGTAAGCCATAA+GGG - chr1_1:78081860-78081879 None:intergenic 30.0%
TTGAAAAGTTGCATGCAAAA+GGG + chr1_1:78082021-78082040 Msa0046070:CDS 30.0%
! AAACCAGAGAACTTTTTACT+AGG + chr1_1:78082219-78082238 Msa0046070:CDS 30.0%
! AAATTGTTTCTTGTTGACCT+TGG + chr1_1:78082267-78082286 Msa0046070:CDS 30.0%
AAAGAAAACCTAAACATGTC+GGG - chr1_1:78082449-78082468 None:intergenic 30.0%
! ATGCTTCTTACTCTTTTGTA+TGG + chr1_1:78082528-78082547 Msa0046070:intron 30.0%
ATACACTAATCTTCCTTCAT+AGG + chr1_1:78082671-78082690 Msa0046070:CDS 30.0%
TACACTAATCTTCCTTCATA+GGG + chr1_1:78082672-78082691 Msa0046070:CDS 30.0%
CTCGTTTGCAAAAAGAAAAT+GGG + chr1_1:78082830-78082849 Msa0046070:CDS 30.0%
AGAAATTGTTTAAAAGGAGC+GGG - chr1_1:78082887-78082906 None:intergenic 30.0%
GAGAAATTGTTTAAAAGGAG+CGG - chr1_1:78082888-78082907 None:intergenic 30.0%
GTCTCGAGAAATTGTTTAAA+AGG - chr1_1:78082893-78082912 None:intergenic 30.0%
! GATATTAGCTTGGAATAGTT+AGG - chr1_1:78082944-78082963 None:intergenic 30.0%
ATCAAACAAGGATATTAGCT+TGG - chr1_1:78082954-78082973 None:intergenic 30.0%
! AAGCTAATATCCTTGTTTGA+TGG + chr1_1:78082953-78082972 Msa0046070:CDS 30.0%
GTCTACTTGAAACCTAAATT+TGG + chr1_1:78083118-78083137 Msa0046070:intron 30.0%
ACTTGAAACCTAAATTTGGT+AGG + chr1_1:78083122-78083141 Msa0046070:intron 30.0%
AAACCTAAATTTGGTAGGTT+GGG + chr1_1:78083127-78083146 Msa0046070:intron 30.0%
TTCAAAAGTCACAAGTAACT+CGG - chr1_1:78083367-78083386 None:intergenic 30.0%
! AGTTACTTGTGACTTTTGAA+TGG + chr1_1:78083367-78083386 Msa0046070:intron 30.0%
! GTTACTTGTGACTTTTGAAT+GGG + chr1_1:78083368-78083387 Msa0046070:intron 30.0%
ATGATACACAGCTAATAAGA+AGG - chr1_1:78083469-78083488 None:intergenic 30.0%
!!! ACCATTATTTTTACACAAGG+TGG + chr1_1:78083559-78083578 Msa0046070:intron 30.0%
TCCACCTTGTGTAAAAATAA+TGG - chr1_1:78083563-78083582 None:intergenic 30.0%
TTCTACATTACTTCTATTGC+AGG + chr1_1:78083694-78083713 Msa0046070:CDS 30.0%
TCTACATTACTTCTATTGCA+GGG + chr1_1:78083695-78083714 Msa0046070:CDS 30.0%
!!! CAATATTACTTTTTGCAACG+GGG + chr1_1:78083768-78083787 Msa0046070:intron 30.0%
AAAGCAAGAATACATGCTAT+GGG - chr1_1:78083876-78083895 None:intergenic 30.0%
AAAAGCAAGAATACATGCTA+TGG - chr1_1:78083877-78083896 None:intergenic 30.0%
! ATAGCATGTATTCTTGCTTT+TGG + chr1_1:78083876-78083895 Msa0046070:intron 30.0%
!! TAGCATGTATTCTTGCTTTT+GGG + chr1_1:78083877-78083896 Msa0046070:intron 30.0%
!! TCTTTTGTTTGACAGACTTA+AGG + chr1_1:78083926-78083945 Msa0046070:intron 30.0%
!!! ATGAGCGAAACTCTTTTTTA+TGG - chr1_1:78084208-78084227 None:intergenic 30.0%
!!! GCCTCTTAAGTTTTTTTTGA+TGG + chr1_1:78084593-78084612 Msa0046070:intron 30.0%
TGTCAACACAATCAATAGAA+AGG - chr1_1:78084670-78084689 None:intergenic 30.0%
TTCTTCAAACAAAACCAGTA+TGG - chr1_1:78084727-78084746 None:intergenic 30.0%
! CTATTTCCTCTGATTTTGTT+AGG + chr1_1:78084790-78084809 Msa0046070:intron 30.0%
!!! GGTTTTGATTTAATTTCTGC+AGG + chr1_1:78084812-78084831 Msa0046070:intron 30.0%
! ATTTAATTTCTGCAGGTACA+AGG + chr1_1:78084819-78084838 Msa0046070:intron 30.0%
! TCTTGTTTATCCATTTGTAG+GGG - chr1_1:78084880-78084899 None:intergenic 30.0%
! CTTCTTGTTTATCCATTTGT+AGG - chr1_1:78084882-78084901 None:intergenic 30.0%
ACAAATGGATAAACAAGAAG+TGG + chr1_1:78084882-78084901 Msa0046070:CDS 30.0%
ATAAACAAGAAGTGGAAAGA+AGG + chr1_1:78084890-78084909 Msa0046070:CDS 30.0%
CTACATTTACAAGGTTAGTA+AGG - chr1_1:78085047-78085066 None:intergenic 30.0%
CTTACTAACCTTGTAAATGT+AGG + chr1_1:78085045-78085064 Msa0046070:intron 30.0%
! CTTTTTGTGTTCAGGAAAAA+TGG + chr1_1:78085325-78085344 Msa0046070:intron 30.0%
CAATTAATTTCTGATGGCAA+AGG - chr1_1:78085405-78085424 None:intergenic 30.0%
CAGAAAGATGTCATATGATA+GGG - chr1_1:78085454-78085473 None:intergenic 30.0%
TCAGAAAGATGTCATATGAT+AGG - chr1_1:78085455-78085474 None:intergenic 30.0%
! GGAATTTTTGTGAAAATAGC+TGG - chr1_1:78085685-78085704 None:intergenic 30.0%
!! CCTTGAATTTAGTTTGCAAG+GGG + chr1_1:78079685-78079704 Msa0046070:five_prime_UTR 35.0%
!! CTTGAATTTAGTTTGCAAGG+GGG + chr1_1:78079686-78079705 Msa0046070:five_prime_UTR 35.0%
! CATCATTATCATCGATTGCA+TGG + chr1_1:78079891-78079910 Msa0046070:five_prime_UTR 35.0%
!! TGATTTGTTGATGTTCTTGG+CGG - chr1_1:78080032-78080051 None:intergenic 35.0%
!! GGATGATTTGTTGATGTTCT+TGG - chr1_1:78080035-78080054 None:intergenic 35.0%
ATTACTATGTTCTCTTTGGG+AGG - chr1_1:78080112-78080131 None:intergenic 35.0%
!! GTGTTTTTAAGGACTCATGA+TGG + chr1_1:78080304-78080323 Msa0046070:intron 35.0%
!! TGGATTTCAAGTTGTTGTTG+TGG + chr1_1:78080324-78080343 Msa0046070:intron 35.0%
!! ATTTTGAAGGTTCAAGTAGG+AGG + chr1_1:78080411-78080430 Msa0046070:intron 35.0%
TTCCTTTCTACCTTGTATAG+AGG - chr1_1:78080441-78080460 None:intergenic 35.0%
TACAAGGTAGAAAGGAAACT+TGG + chr1_1:78080444-78080463 Msa0046070:CDS 35.0%
GTAGAAAGGAAACTTGGTAA+AGG + chr1_1:78080450-78080469 Msa0046070:CDS 35.0%
! AAACTTGGTAAAGGTGGATT+TGG + chr1_1:78080459-78080478 Msa0046070:CDS 35.0%
AAAAGAGAAACATACCTCGA+CGG - chr1_1:78080529-78080548 None:intergenic 35.0%
AACAGTAAAGGTTGCAACTA+TGG + chr1_1:78080653-78080672 Msa0046070:CDS 35.0%
TTGTATACTTGCCACTCATA+AGG - chr1_1:78080683-78080702 None:intergenic 35.0%
CAACTAGAATAGTTGTGTCA+AGG - chr1_1:78080775-78080794 None:intergenic 35.0%
! TGACACAACTATTCTAGTTG+TGG + chr1_1:78080775-78080794 Msa0046070:intron 35.0%
TACTGTTATCTTGCATAAGC+AGG - chr1_1:78080853-78080872 None:intergenic 35.0%
GTACACTATAAAGGAAGACA+AGG + chr1_1:78081060-78081079 Msa0046070:CDS 35.0%
TAACCTGCATATAGAGGAAA+TGG - chr1_1:78081161-78081180 None:intergenic 35.0%
TTTCCTCTATATGCAGGTTA+TGG + chr1_1:78081161-78081180 Msa0046070:intron 35.0%
!! GTAGCTCTTGCTTTGTTTAT+AGG + chr1_1:78081270-78081289 Msa0046070:intron 35.0%
AAGGCAAAAAAAAACACCGT+CGG - chr1_1:78081610-78081629 None:intergenic 35.0%
! CAATGAGTTGGAACGAAATA+TGG - chr1_1:78081713-78081732 None:intergenic 35.0%
! GCAAAAAAAGCACGGTAAAA+AGG - chr1_1:78081800-78081819 None:intergenic 35.0%
GATGTTCAAAGTAAGCCATA+AGG - chr1_1:78081861-78081880 None:intergenic 35.0%
CTTGAAAAGTTGCATGCAAA+AGG + chr1_1:78082020-78082039 Msa0046070:CDS 35.0%
CATGCAAAAGGGTAAGTTAT+CGG + chr1_1:78082032-78082051 Msa0046070:intron 35.0%
TTTCTTGTTGACCTTGGTTT+AGG + chr1_1:78082273-78082292 Msa0046070:CDS 35.0%
AAGAAAACCTAAACATGTCG+GGG - chr1_1:78082448-78082467 None:intergenic 35.0%
AGGGGGTAAGAAAAAAAAAG+AGG - chr1_1:78082478-78082497 None:intergenic 35.0%
ACACTAATCTTCCTTCATAG+GGG + chr1_1:78082673-78082692 Msa0046070:CDS 35.0%
TACTTTGTCTATTAGGGTGA+TGG + chr1_1:78082797-78082816 Msa0046070:intron 35.0%
! TTTCTTTTTGCAAACGAGGA+AGG - chr1_1:78082828-78082847 None:intergenic 35.0%
! CCATTTTCTTTTTGCAAACG+AGG - chr1_1:78082832-78082851 None:intergenic 35.0%
CCTCGTTTGCAAAAAGAAAA+TGG + chr1_1:78082829-78082848 Msa0046070:CDS 35.0%
GAAATTGTTTAAAAGGAGCG+GGG - chr1_1:78082886-78082905 None:intergenic 35.0%
TAAACAATTTCTCGAGACTG+TGG + chr1_1:78082895-78082914 Msa0046070:CDS 35.0%
TGAGCACCTTCAGTATTAAT+TGG - chr1_1:78083007-78083026 None:intergenic 35.0%
!! TAATACTGAAGGTGCTCAAA+AGG + chr1_1:78083009-78083028 Msa0046070:CDS 35.0%
GTACAATAGGCAACCAAAAA+GGG - chr1_1:78083082-78083101 None:intergenic 35.0%
AGTACAATAGGCAACCAAAA+AGG - chr1_1:78083083-78083102 None:intergenic 35.0%
TTCAAGTAGACATACACACT+CGG - chr1_1:78083109-78083128 None:intergenic 35.0%
GAAACCTAAATTTGGTAGGT+TGG + chr1_1:78083126-78083145 Msa0046070:intron 35.0%
CTAGACAACCAATGAAACAA+AGG + chr1_1:78083253-78083272 Msa0046070:CDS 35.0%
! TTTGAATGGGTTTGCATTGT+AGG + chr1_1:78083381-78083400 Msa0046070:intron 35.0%
TTGTAGGTACCATTACAATG+TGG + chr1_1:78083397-78083416 Msa0046070:intron 35.0%
TATCATGTTGTTCCAATCTC+TGG + chr1_1:78083483-78083502 Msa0046070:CDS 35.0%
ATCATGTTGTTCCAATCTCT+GGG + chr1_1:78083484-78083503 Msa0046070:CDS 35.0%
GGATGCTGGAACTAATTATT+CGG + chr1_1:78083517-78083536 Msa0046070:CDS 35.0%
CTATACTTGTAAAAACCGCA+AGG - chr1_1:78083600-78083619 None:intergenic 35.0%
CTACATTACTTCTATTGCAG+GGG + chr1_1:78083696-78083715 Msa0046070:CDS 35.0%
!! TGTATTCTTGCTTTTGGGAA+TGG + chr1_1:78083882-78083901 Msa0046070:intron 35.0%
!! TTTTGGGAATGGATGGTTTT+TGG + chr1_1:78083893-78083912 Msa0046070:intron 35.0%
AATATAACCGGAAGAGTAGT+GGG - chr1_1:78084111-78084130 None:intergenic 35.0%
AAATATAACCGGAAGAGTAG+TGG - chr1_1:78084112-78084131 None:intergenic 35.0%
CTTGGAATCATCATACAACA+GGG - chr1_1:78084770-78084789 None:intergenic 35.0%
CAAAATCAGAGGAAATAGCT+TGG - chr1_1:78084788-78084807 None:intergenic 35.0%
CAAAACCCTAACAAAATCAG+AGG - chr1_1:78084799-78084818 None:intergenic 35.0%
AAGGTTAGTAAGGACAGAAA+GGG - chr1_1:78085037-78085056 None:intergenic 35.0%
ACTAACCTTGTAAATGTAGG+TGG + chr1_1:78085048-78085067 Msa0046070:intron 35.0%
! GATTTTCTCTATCCAAGTGA+AGG + chr1_1:78085079-78085098 Msa0046070:CDS 35.0%
ATCCATAAACGTTGGGATAA+TGG + chr1_1:78085103-78085122 Msa0046070:CDS 35.0%
AACCATTATCCCAACGTTTA+TGG - chr1_1:78085108-78085127 None:intergenic 35.0%
! AACGTTGGGATAATGGTTAT+AGG + chr1_1:78085110-78085129 Msa0046070:CDS 35.0%
CAAAAAGAACCTAGAATCAG+AGG - chr1_1:78085312-78085331 None:intergenic 35.0%
! TCTAGGTTCTTTTTGTGTTC+AGG + chr1_1:78085317-78085336 Msa0046070:intron 35.0%
!! TGCATGCTTTACTTTGGTTT+TGG + chr1_1:78085542-78085561 Msa0046070:three_prime_UTR 35.0%
TAAGTGGAAAGTCTGTGTAG+AGG + chr1_1:78079657-78079676 Msa0046070:five_prime_UTR 40.0%
AAGTGGAAAGTCTGTGTAGA+GGG + chr1_1:78079658-78079677 Msa0046070:five_prime_UTR 40.0%
CCCCTTGCAAACTAAATTCA+AGG - chr1_1:78079688-78079707 None:intergenic 40.0%
! AAGAAGGGTGAGTTGAGAAA+TGG - chr1_1:78079740-78079759 None:intergenic 40.0%
TTTGATAAAGCAGCAGCGTA+TGG + chr1_1:78079861-78079880 Msa0046070:five_prime_UTR 40.0%
GAACATCAACAAATCATCCC+AGG + chr1_1:78080036-78080055 Msa0046070:CDS 40.0%
! TCAGGTTGTAATAACAACGG+CGG - chr1_1:78080073-78080092 None:intergenic 40.0%
!! GGTTCAACAACGAAAGTATC+AGG - chr1_1:78080091-78080110 None:intergenic 40.0%
GAAGAAGAAGAAGAAGCTGT+TGG + chr1_1:78080145-78080164 Msa0046070:CDS 40.0%
AAGTAACTAAGTACCCTCTC+TGG - chr1_1:78080262-78080281 None:intergenic 40.0%
GAAAGGAAACTTGGTAAAGG+TGG + chr1_1:78080453-78080472 Msa0046070:CDS 40.0%
ATACTTGCCACTCATAAGGA+GGG - chr1_1:78080679-78080698 None:intergenic 40.0%
TATACTTGCCACTCATAAGG+AGG - chr1_1:78080680-78080699 None:intergenic 40.0%
TGAGTGGCAAGTATACAAGT+AGG + chr1_1:78080685-78080704 Msa0046070:intron 40.0%
GATGTCATAGGTTTGAGTCA+CGG + chr1_1:78080810-78080829 Msa0046070:intron 40.0%
GATAGACTCTATAGAAGGGT+CGG - chr1_1:78080909-78080928 None:intergenic 40.0%
CCGTGATAGACTCTATAGAA+GGG - chr1_1:78080913-78080932 None:intergenic 40.0%
CCCTTCTATAGAGTCTATCA+CGG + chr1_1:78080910-78080929 Msa0046070:intron 40.0%
ACCGTGATAGACTCTATAGA+AGG - chr1_1:78080914-78080933 None:intergenic 40.0%
TATTCCATGACTACCACCAA+GGG - chr1_1:78081034-78081053 None:intergenic 40.0%
AAGTTGGCAATGGGATAGTA+CGG - chr1_1:78081128-78081147 None:intergenic 40.0%
CAACCATTTCCTCTATATGC+AGG + chr1_1:78081155-78081174 Msa0046070:intron 40.0%
TGTCCATAACCTGCATATAG+AGG - chr1_1:78081167-78081186 None:intergenic 40.0%
ATGCAGGTTATGGACATTCT+TGG + chr1_1:78081171-78081190 Msa0046070:intron 40.0%
ACATTCTTGGTCCAAGTTTG+TGG + chr1_1:78081184-78081203 Msa0046070:CDS 40.0%
CATTCTTGGTCCAAGTTTGT+GGG + chr1_1:78081185-78081204 Msa0046070:CDS 40.0%
TTCCATACATCCCACAAACT+TGG - chr1_1:78081198-78081217 None:intergenic 40.0%
ACAAAGCAAGAGCTACAATC+AGG - chr1_1:78081266-78081285 None:intergenic 40.0%
TCAAAGTAAGCCATAAGGGA+GGG - chr1_1:78081856-78081875 None:intergenic 40.0%
TTCAAAGTAAGCCATAAGGG+AGG - chr1_1:78081857-78081876 None:intergenic 40.0%
! GTTTAGGATGTCTCCTGAAA+TGG + chr1_1:78081965-78081984 Msa0046070:intron 40.0%
GCTATACATGAGACCATTTC+AGG - chr1_1:78081981-78082000 None:intergenic 40.0%
TGTGGTAGGAAGAATGTATC+AGG - chr1_1:78082089-78082108 None:intergenic 40.0%
TGGCCTAGTAAAAAGTTCTC+TGG - chr1_1:78082225-78082244 None:intergenic 40.0%
! TTGACCTTGGTTTAGGTTAG+TGG + chr1_1:78082280-78082299 Msa0046070:intron 40.0%
CATAACTCACAGCAACAAAG+TGG + chr1_1:78082381-78082400 Msa0046070:intron 40.0%
AAGTGGAAAGATTCGTCAAG+TGG + chr1_1:78082398-78082417 Msa0046070:CDS 40.0%
TTCAAGATCATCCCTTCTAC+TGG - chr1_1:78082641-78082660 None:intergenic 40.0%
AACTTGCACAGTTTAATGCC+TGG - chr1_1:78082747-78082766 None:intergenic 40.0%
! TCCTTGTTTGATGGTATGCT+CGG + chr1_1:78082962-78082981 Msa0046070:CDS 40.0%
TTGCGGCCAATTAATACTGA+AGG + chr1_1:78082998-78083017 Msa0046070:CDS 40.0%
TTGCCCAACCTACCAAATTT+AGG - chr1_1:78083133-78083152 None:intergenic 40.0%
TGATTCACAGCCCAAAAAGA+AGG + chr1_1:78083185-78083204 Msa0046070:CDS 40.0%
! CCTGAACGAACCTTCTTTTT+GGG - chr1_1:78083198-78083217 None:intergenic 40.0%
CCAAAAAGAAGGTTCGTTCA+GGG + chr1_1:78083196-78083215 Msa0046070:CDS 40.0%
! GCGCTTTACCTTTGTTTCAT+TGG - chr1_1:78083264-78083283 None:intergenic 40.0%
! ATTTCTGGACTAAAGGAGCT+AGG - chr1_1:78083300-78083319 None:intergenic 40.0%
TACCATTACAATGTGGCTGA+TGG + chr1_1:78083404-78083423 Msa0046070:CDS 40.0%
TTCCATCAGCCACATTGTAA+TGG - chr1_1:78083409-78083428 None:intergenic 40.0%
TTAGCACAGCATATTGAGAG+AGG + chr1_1:78083431-78083450 Msa0046070:CDS 40.0%
TAGCACAGCATATTGAGAGA+GGG + chr1_1:78083432-78083451 Msa0046070:CDS 40.0%
CATTATAAGTGCCCAGAGAT+TGG - chr1_1:78083498-78083517 None:intergenic 40.0%
CAATCTCTGGGCACTTATAA+TGG + chr1_1:78083496-78083515 Msa0046070:CDS 40.0%
! ATACGACATTGTTTCTTCGC+AGG + chr1_1:78083642-78083661 Msa0046070:intron 40.0%
! ACATTGTTTCTTCGCAGGAA+TGG + chr1_1:78083647-78083666 Msa0046070:intron 40.0%
AGGAATGGATCTTGGAACAA+TGG + chr1_1:78083662-78083681 Msa0046070:intron 40.0%
GGAATGGATCTTGGAACAAT+GGG + chr1_1:78083663-78083682 Msa0046070:intron 40.0%
! TCTGTTGTGGTGATGTCAAA+AGG + chr1_1:78083733-78083752 Msa0046070:CDS 40.0%
!! TTCTTGCTTTTGGGAATGGA+TGG + chr1_1:78083886-78083905 Msa0046070:intron 40.0%
! GTGATAAGACTTGGTTGTAG+TGG - chr1_1:78084041-78084060 None:intergenic 40.0%
! CAACCAAGTCTTATCACACT+AGG + chr1_1:78084044-78084063 Msa0046070:intron 40.0%
ATATAACCGGAAGAGTAGTG+GGG - chr1_1:78084110-78084129 None:intergenic 40.0%
!! GGGTTGGCTTAATAGATCAA+AGG + chr1_1:78084521-78084540 Msa0046070:intron 40.0%
AAACTTAAGAGGCTGCCAAT+GGG - chr1_1:78084586-78084605 None:intergenic 40.0%
AAAACTTAAGAGGCTGCCAA+TGG - chr1_1:78084587-78084606 None:intergenic 40.0%
! TTGATTGTGTTGACAGTCCT+AGG + chr1_1:78084675-78084694 Msa0046070:intron 40.0%
GCTTGGAATCATCATACAAC+AGG - chr1_1:78084771-78084790 None:intergenic 40.0%
! AGGTTTTCATGTCACCTCAA+TGG + chr1_1:78084910-78084929 Msa0046070:CDS 40.0%
! GGTTTTCATGTCACCTCAAT+GGG + chr1_1:78084911-78084930 Msa0046070:CDS 40.0%
CAAGGTTAGTAAGGACAGAA+AGG - chr1_1:78085038-78085057 None:intergenic 40.0%
AACCTTGTAAATGTAGGTGG+TGG + chr1_1:78085051-78085070 Msa0046070:intron 40.0%
TTCCACCACCTACATTTACA+AGG - chr1_1:78085056-78085075 None:intergenic 40.0%
!! TGAAGGCATCCATAAACGTT+GGG + chr1_1:78085096-78085115 Msa0046070:CDS 40.0%
AAGACTTGTCCTCTGATTCT+AGG + chr1_1:78085300-78085319 Msa0046070:intron 40.0%
AGCACAAATGGGCAAGATAA+AGG - chr1_1:78085359-78085378 None:intergenic 40.0%
TATCTTGCCCATTTGTGCTA+TGG + chr1_1:78085360-78085379 Msa0046070:CDS 40.0%
ATCTTGCCCATTTGTGCTAT+GGG + chr1_1:78085361-78085380 Msa0046070:CDS 40.0%
!!! TTTGGTTTTGGAATTCGGCA+GGG + chr1_1:78085554-78085573 Msa0046070:three_prime_UTR 40.0%
! AAGGGTGAGTTGAGAAATGG+AGG - chr1_1:78079737-78079756 None:intergenic 45.0%
TTTGTTGATGTTCTTGGCGG+CGG - chr1_1:78080029-78080048 None:intergenic 45.0%
CATCAACAAATCATCCCAGG+AGG + chr1_1:78080039-78080058 Msa0046070:CDS 45.0%
GTTGTAATAACAACGGCGGT+GGG - chr1_1:78080069-78080088 None:intergenic 45.0%
AGAAGAAGCTGTTGGTGTGA+TGG + chr1_1:78080153-78080172 Msa0046070:CDS 45.0%
GAAGAAGCTGTTGGTGTGAT+GGG + chr1_1:78080154-78080173 Msa0046070:CDS 45.0%
!! GTGATGGGTGATGAAAGAGT+TGG + chr1_1:78080169-78080188 Msa0046070:CDS 45.0%
CGCCTCTATACAAGGTAGAA+AGG + chr1_1:78080436-78080455 Msa0046070:CDS 45.0%
! GGATTTGGCCAGGTTTTTGT+TGG + chr1_1:78080474-78080493 Msa0046070:CDS 45.0%
ACTCACAAGGCCAAATCAGA+AGG - chr1_1:78080585-78080604 None:intergenic 45.0%
TCGTCTGACTAGGATGTCAT+AGG + chr1_1:78080798-78080817 Msa0046070:intron 45.0%
ATTGCGGGTCTATTGTGTAG+AGG - chr1_1:78080882-78080901 None:intergenic 45.0%
TCTACACAATAGACCCGCAA+TGG + chr1_1:78080881-78080900 Msa0046070:intron 45.0%
CTACACAATAGACCCGCAAT+GGG + chr1_1:78080882-78080901 Msa0046070:intron 45.0%
! CGGTGAAAGCTTTATAGCAC+CGG + chr1_1:78080930-78080949 Msa0046070:intron 45.0%
! GGTGAAAGCTTTATAGCACC+GGG + chr1_1:78080931-78080950 Msa0046070:intron 45.0%
!! TGTTGTGTCAAAAGCACCCT+TGG + chr1_1:78081015-78081034 Msa0046070:intron 45.0%
GTATTCCATGACTACCACCA+AGG - chr1_1:78081035-78081054 None:intergenic 45.0%
GTCCAAGTTTGTGGGATGTA+TGG + chr1_1:78081193-78081212 Msa0046070:CDS 45.0%
TGGGATGTATGGAATACCTC+AGG + chr1_1:78081204-78081223 Msa0046070:CDS 45.0%
! TCACACTGACACAAGTTGAC+TGG + chr1_1:78081366-78081385 Msa0046070:intron 45.0%
! GGCTTGGTTGTTGTTGTTGA+AGG - chr1_1:78081629-78081648 None:intergenic 45.0%
CAAGCCTTTACCCACTAAGT+GGG + chr1_1:78081643-78081662 Msa0046070:intron 45.0%
AAGCCTTTACCCACTAAGTG+GGG + chr1_1:78081644-78081663 Msa0046070:intron 45.0%
ATAAGGGAGGGTGGGTAAAA+AGG - chr1_1:78081844-78081863 None:intergenic 45.0%
! TTTTTACCCACCCTCCCTTA+TGG + chr1_1:78081843-78081862 Msa0046070:intron 45.0%
TTCTTCTCCTGTGCTGTGTT+GGG - chr1_1:78082249-78082268 None:intergenic 45.0%
TTTCTTCTCCTGTGCTGTGT+TGG - chr1_1:78082250-78082269 None:intergenic 45.0%
GCATCCACTAACCTAAACCA+AGG - chr1_1:78082287-78082306 None:intergenic 45.0%
TGCTAGCGTTCATGCTCATT+TGG + chr1_1:78082606-78082625 Msa0046070:CDS 45.0%
GCTAGCGTTCATGCTCATTT+GGG + chr1_1:78082607-78082626 Msa0046070:CDS 45.0%
! ATTGCCATGGCAAGGTTTTC+AGG + chr1_1:78082699-78082718 Msa0046070:CDS 45.0%
TGTACCTGAAAACCTTGCCA+TGG - chr1_1:78082706-78082725 None:intergenic 45.0%
TCCGAGCATACCATCAAACA+AGG - chr1_1:78082966-78082985 None:intergenic 45.0%
GTATTAATTGGCCGCAATGC+AGG - chr1_1:78082995-78083014 None:intergenic 45.0%
TGCACGTGTACTCAAGTTTC+TGG + chr1_1:78083043-78083062 Msa0046070:intron 45.0%
CACACTCGGATGAGTACAAT+AGG - chr1_1:78083095-78083114 None:intergenic 45.0%
! TTTGGTAGGTTGGGCAAAAG+CGG + chr1_1:78083136-78083155 Msa0046070:intron 45.0%
CCCAAAAAGAAGGTTCGTTC+AGG + chr1_1:78083195-78083214 Msa0046070:CDS 45.0%
! CCCTGAACGAACCTTCTTTT+TGG - chr1_1:78083199-78083218 None:intergenic 45.0%
ACTGAAATCCATTGCGAAGC+AGG - chr1_1:78083225-78083244 None:intergenic 45.0%
!! TGGGCACTTATAATGGATGC+TGG + chr1_1:78083503-78083522 Msa0046070:CDS 45.0%
AATGTGCTGTGTATGCCTTG+CGG + chr1_1:78083582-78083601 Msa0046070:intron 45.0%
TTCTTCGCAGGAATGGATCT+TGG + chr1_1:78083654-78083673 Msa0046070:intron 45.0%
CACAACAGAGCTTCCATTAC+TGG - chr1_1:78083722-78083741 None:intergenic 45.0%
! CAGTAATGGAAGCTCTGTTG+TGG + chr1_1:78083720-78083739 Msa0046070:CDS 45.0%
CTGCCTAGTGTGATAAGACT+TGG - chr1_1:78084050-78084069 None:intergenic 45.0%
GGATCTAGGTAGAGTGGTTT+GGG + chr1_1:78084074-78084093 Msa0046070:intron 45.0%
GATCTAGGTAGAGTGGTTTG+GGG + chr1_1:78084075-78084094 Msa0046070:intron 45.0%
! ATCTAGGTAGAGTGGTTTGG+GGG + chr1_1:78084076-78084095 Msa0046070:intron 45.0%
TATAACCGGAAGAGTAGTGG+GGG - chr1_1:78084109-78084128 None:intergenic 45.0%
! ATCCAGAAATGGTGACTTGC+GGG - chr1_1:78084482-78084501 None:intergenic 45.0%
GATCCAGAAATGGTGACTTG+CGG - chr1_1:78084483-78084502 None:intergenic 45.0%
CATATCTCTAGCCAACCCAT+TGG + chr1_1:78084568-78084587 Msa0046070:intron 45.0%
!!! TCTTTGTTTTTCCCTCCCTC+TGG + chr1_1:78084632-78084651 Msa0046070:intron 45.0%
GCGAATCTTTCCCCTACAAA+TGG + chr1_1:78084867-78084886 Msa0046070:CDS 45.0%
ATTTCCAGCAGTACCCATTG+AGG - chr1_1:78084927-78084946 None:intergenic 45.0%
ATTGTTATGTCTCGCAACGC+TGG + chr1_1:78084956-78084975 Msa0046070:CDS 45.0%
GACAGAAAGGGAAACTACAG+TGG - chr1_1:78085025-78085044 None:intergenic 45.0%
CGTTTATGGATGCCTTCACT+TGG - chr1_1:78085094-78085113 None:intergenic 45.0%
!! GTGAAGGCATCCATAAACGT+TGG + chr1_1:78085095-78085114 Msa0046070:CDS 45.0%
TACAGCAACTGCAGCTACAT+TGG + chr1_1:78085135-78085154 Msa0046070:CDS 45.0%
CGCTTATATTAAGCATCCCG+AGG + chr1_1:78085167-78085186 Msa0046070:CDS 45.0%
GTTTCCTGAGTTTCATCACC+AGG - chr1_1:78085199-78085218 None:intergenic 45.0%
ATTTCCCAGCGCTCATGTTA+AGG + chr1_1:78085234-78085253 Msa0046070:CDS 45.0%
GAACAAATATGGTTCCCTGC+TGG - chr1_1:78085489-78085508 None:intergenic 45.0%
!!! CTTTGGTTTTGGAATTCGGC+AGG + chr1_1:78085553-78085572 Msa0046070:three_prime_UTR 45.0%
!!! TAATTTTTCTAATATATAAT+AGG + chr1_1:78084350-78084369 Msa0046070:intron 5.0%
! GTGAGTTGAGAAATGGAGGC+AGG - chr1_1:78079733-78079752 None:intergenic 50.0%
AGAATGCCTCAGCTTCGTAG+TGG + chr1_1:78079920-78079939 Msa0046070:exon 50.0%
!! TCTAGTTCTGGGTCTACCTC+TGG - chr1_1:78080002-78080021 None:intergenic 50.0%
CAACAAATCATCCCAGGAGG+AGG + chr1_1:78080042-78080061 Msa0046070:CDS 50.0%
GGTTGTAATAACAACGGCGG+TGG - chr1_1:78080070-78080089 None:intergenic 50.0%
TGGAGAGTTGGCATCTTCCT+CGG - chr1_1:78080233-78080252 None:intergenic 50.0%
! CTAAGTACCCTCTCTGGAAG+AGG - chr1_1:78080256-78080275 None:intergenic 50.0%
AGGAGGATCGCCTCTATACA+AGG + chr1_1:78080428-78080447 Msa0046070:CDS 50.0%
! TGGTAAAGGTGGATTTGGCC+AGG + chr1_1:78080464-78080483 Msa0046070:CDS 50.0%
ACTATGGCCCTCCTTATGAG+TGG + chr1_1:78080669-78080688 Msa0046070:CDS 50.0%
CTAGTTGTGGTCGTCTGACT+AGG + chr1_1:78080788-78080807 Msa0046070:intron 50.0%
AGGTTTGAGTCACGGACTCA+TGG + chr1_1:78080818-78080837 Msa0046070:intron 50.0%
GAGTCACGGACTCATGGATT+CGG + chr1_1:78080824-78080843 Msa0046070:intron 50.0%
CGGGTCTATTGTGTAGAGGT+GGG - chr1_1:78080878-78080897 None:intergenic 50.0%
!! TGTGTCAAAAGCACCCTTGG+TGG + chr1_1:78081018-78081037 Msa0046070:intron 50.0%
!! TTATACTCACGACTGGCCTG+AGG - chr1_1:78081223-78081242 None:intergenic 50.0%
! CCACTTAGTGGGTAAAGGCT+TGG - chr1_1:78081645-78081664 None:intergenic 50.0%
CCAAGCCTTTACCCACTAAG+TGG + chr1_1:78081642-78081661 Msa0046070:intron 50.0%
CTTTACCCACTAAGTGGGGT+CGG + chr1_1:78081648-78081667 Msa0046070:intron 50.0%
AGTAAGCCATAAGGGAGGGT+GGG - chr1_1:78081852-78081871 None:intergenic 50.0%
AAGTAAGCCATAAGGGAGGG+TGG - chr1_1:78081853-78081872 None:intergenic 50.0%
ATCAACGCCCCGACATGTTT+AGG + chr1_1:78082438-78082457 Msa0046070:CDS 50.0%
TGGGAAGAACTGCCAGTAGA+AGG + chr1_1:78082626-78082645 Msa0046070:CDS 50.0%
GGGAAGAACTGCCAGTAGAA+GGG + chr1_1:78082627-78082646 Msa0046070:CDS 50.0%
ATGGCAATCGACCCCTATGA+AGG - chr1_1:78082687-78082706 None:intergenic 50.0%
TTCATAGGGGTCGATTGCCA+TGG + chr1_1:78082686-78082705 Msa0046070:CDS 50.0%
TCGGACCTAATCCTGCATTG+CGG + chr1_1:78082981-78083000 Msa0046070:CDS 50.0%
ATTGGCCGCAATGCAGGATT+AGG - chr1_1:78082989-78083008 None:intergenic 50.0%
! TTGGTAGGTTGGGCAAAAGC+GGG + chr1_1:78083137-78083156 Msa0046070:intron 50.0%
GCGGGGTAGATTGAATGTTG+AGG + chr1_1:78083155-78083174 Msa0046070:CDS 50.0%
TCTATTGCAGGGGCCAGTAA+TGG + chr1_1:78083706-78083725 Msa0046070:CDS 50.0%
CTTATCACACTAGGCAGCCA+CGG + chr1_1:78084053-78084072 Msa0046070:intron 50.0%
AACCACTCTACCTAGATCCG+TGG - chr1_1:78084073-78084092 None:intergenic 50.0%
CGGATCTAGGTAGAGTGGTT+TGG + chr1_1:78084073-78084092 Msa0046070:intron 50.0%
! TCTAGGTAGAGTGGTTTGGG+GGG + chr1_1:78084077-78084096 Msa0046070:intron 50.0%
! TCCAGAAATGGTGACTTGCG+GGG - chr1_1:78084481-78084500 None:intergenic 50.0%
!! GTCAGTGACGGATCCAGAAA+TGG - chr1_1:78084493-78084512 None:intergenic 50.0%
ATCCGTCACTGACACTAGGT+AGG + chr1_1:78084500-78084519 Msa0046070:intron 50.0%
TCCGTCACTGACACTAGGTA+GGG + chr1_1:78084501-78084520 Msa0046070:intron 50.0%
ACCCTACCTAGTGTCAGTGA+CGG - chr1_1:78084505-78084524 None:intergenic 50.0%
TCACTGACACTAGGTAGGGT+TGG + chr1_1:78084505-78084524 Msa0046070:intron 50.0%
TTAAGAGGCTGCCAATGGGT+TGG - chr1_1:78084582-78084601 None:intergenic 50.0%
CAACGCTGGATTCAGTGATC+AGG + chr1_1:78084970-78084989 Msa0046070:CDS 50.0%
TCATCACCAGGTCTGTTCCT+CGG - chr1_1:78085187-78085206 None:intergenic 50.0%
! CAGACCTGGTGATGAAACTC+AGG + chr1_1:78085192-78085211 Msa0046070:CDS 50.0%
CCTACCTTAACATGAGCGCT+GGG - chr1_1:78085241-78085260 None:intergenic 50.0%
CCAGCGCTCATGTTAAGGTA+GGG + chr1_1:78085239-78085258 Msa0046070:intron 50.0%
TGTGCGCCCATAGCACAAAT+GGG - chr1_1:78085370-78085389 None:intergenic 50.0%
TGAAGAGACTTGTGCCAGCA+GGG + chr1_1:78085472-78085491 Msa0046070:three_prime_UTR 50.0%
GTTGAGAAATGGAGGCAGGC+AGG - chr1_1:78079729-78079748 None:intergenic 55.0%
CGAACACCACTACGAAGCTG+AGG - chr1_1:78079929-78079948 None:intergenic 55.0%
!! AGTTCTGGGTCTACCTCTGG+TGG - chr1_1:78079999-78080018 None:intergenic 55.0%
!! GCGGCGGCTAATCTAGTTCT+GGG - chr1_1:78080013-78080032 None:intergenic 55.0%
GGAGAGTTGGCATCTTCCTC+GGG - chr1_1:78080232-78080251 None:intergenic 55.0%
! CTCTGGAAGAGGTGGAGAGT+TGG - chr1_1:78080245-78080264 None:intergenic 55.0%
ACTCTCCACCTCTTCCAGAG+AGG + chr1_1:78080245-78080264 Msa0046070:CDS 55.0%
CTCTCCACCTCTTCCAGAGA+GGG + chr1_1:78080246-78080265 Msa0046070:CDS 55.0%
! AGTACCCTCTCTGGAAGAGG+TGG - chr1_1:78080253-78080272 None:intergenic 55.0%
CACGACGGCCAACAAAAACC+TGG - chr1_1:78080485-78080504 None:intergenic 55.0%
GTGCATTTGCACGCTCACGA+CGG - chr1_1:78080500-78080519 None:intergenic 55.0%
AAACATACCTCGACGGCTCC+TGG - chr1_1:78080522-78080541 None:intergenic 55.0%
GCGGGTCTATTGTGTAGAGG+TGG - chr1_1:78080879-78080898 None:intergenic 55.0%
TAGAAGGGTCGGACCCATTG+CGG - chr1_1:78080898-78080917 None:intergenic 55.0%
! AGCACCCTTGGTGGTAGTCA+TGG + chr1_1:78081027-78081046 Msa0046070:intron 55.0%
! CGACCCCACTTAGTGGGTAA+AGG - chr1_1:78081650-78081669 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr1_1:78081656-78081675 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_1:78081657-78081676 None:intergenic 55.0%
! TGGTAGGTTGGGCAAAAGCG+GGG + chr1_1:78083138-78083157 Msa0046070:intron 55.0%
CAGGGATTCCTGCTTCGCAA+TGG + chr1_1:78083214-78083233 Msa0046070:CDS 55.0%
GGTTGTAGTGGCAACCGTTC+AGG - chr1_1:78084029-78084048 None:intergenic 55.0%
AGCCACGGATCTAGGTAGAG+TGG + chr1_1:78084068-78084087 Msa0046070:intron 55.0%
AACTGCCCCCACTACTCTTC+CGG + chr1_1:78084101-78084120 Msa0046070:intron 55.0%
! CCAGAAATGGTGACTTGCGG+GGG - chr1_1:78084480-78084499 None:intergenic 55.0%
CTGGATCCGTCACTGACACT+AGG + chr1_1:78084496-78084515 Msa0046070:intron 55.0%
! GTCACCTCAATGGGTACTGC+TGG + chr1_1:78084920-78084939 Msa0046070:CDS 55.0%
! TGGGTACTGCTGGAAATCGC+TGG + chr1_1:78084930-78084949 Msa0046070:CDS 55.0%
! GGGTACTGCTGGAAATCGCT+GGG + chr1_1:78084931-78084950 Msa0046070:CDS 55.0%
GGTACTGCTGGAAATCGCTG+GGG + chr1_1:78084932-78084951 Msa0046070:CDS 55.0%
CATCACCAGGTCTGTTCCTC+GGG - chr1_1:78085186-78085205 None:intergenic 55.0%
CCCAGCGCTCATGTTAAGGT+AGG + chr1_1:78085238-78085257 Msa0046070:intron 55.0%
CCCTACCTTAACATGAGCGC+TGG - chr1_1:78085242-78085261 None:intergenic 55.0%
CTGTGCGCCCATAGCACAAA+TGG - chr1_1:78085371-78085390 None:intergenic 55.0%
CTGAAGAGACTTGTGCCAGC+AGG + chr1_1:78085471-78085490 Msa0046070:three_prime_UTR 55.0%
AGAAATGGAGGCAGGCAGGC+AGG - chr1_1:78079725-78079744 None:intergenic 60.0%
! GGCGGCGGCTAATCTAGTTC+TGG - chr1_1:78080014-78080033 None:intergenic 60.0%
CGTGAGCGTGCAAATGCACC+AGG + chr1_1:78080501-78080520 Msa0046070:CDS 60.0%
AAATGCACCAGGAGCCGTCG+AGG + chr1_1:78080512-78080531 Msa0046070:CDS 60.0%
AGAAGGGTCGGACCCATTGC+GGG - chr1_1:78080897-78080916 None:intergenic 60.0%
TCTCCTGTGCTGTGTTGGGC+TGG - chr1_1:78082245-78082264 None:intergenic 60.0%
AGGGGTCGATTGCCATGGCA+AGG + chr1_1:78082691-78082710 Msa0046070:CDS 60.0%
CACTAGGCAGCCACGGATCT+AGG + chr1_1:78084060-78084079 Msa0046070:intron 60.0%
CCCCCGCAAGTCACCATTTC+TGG + chr1_1:78084477-78084496 Msa0046070:intron 60.0%
AGCATCCCGAGGAACAGACC+TGG + chr1_1:78085178-78085197 Msa0046070:CDS 60.0%
GGAGAAGGAGCAGCAGGACG+AGG - chr1_1:78079956-78079975 None:intergenic 65.0%
GGAGGAGGAGAAGGAGCAGC+AGG - chr1_1:78079962-78079981 None:intergenic 65.0%
!! TTGGGTGGCGGAGGAGGAGA+AGG - chr1_1:78079971-78079990 None:intergenic 65.0%
! CTACCTCTGGTGGCCGGCTT+GGG - chr1_1:78079989-78080008 None:intergenic 65.0%
TCTACCTCTGGTGGCCGGCT+TGG - chr1_1:78079990-78080009 None:intergenic 65.0%
CTGGGTCTACCTCTGGTGGC+CGG - chr1_1:78079995-78080014 None:intergenic 65.0%
GGCTGTTGCTGCTGTTCCCG+AGG + chr1_1:78080213-78080232 Msa0046070:CDS 65.0%
AGGCCAGCCCAACACAGCAC+AGG + chr1_1:78082239-78082258 Msa0046070:CDS 65.0%
TCCTCCTCCGCCACCCAAGC+CGG + chr1_1:78079973-78079992 Msa0046070:CDS 70.0%
!! CTGGTGGCCGGCTTGGGTGG+CGG - chr1_1:78079983-78080002 None:intergenic 75.0%
!! CCTCTGGTGGCCGGCTTGGG+TGG - chr1_1:78079986-78080005 None:intergenic 75.0%
CCACCCAAGCCGGCCACCAG+AGG + chr1_1:78079983-78080002 Msa0046070:CDS 75.0%
CGGCGGTGGGTCCTCCTCCT+GGG - chr1_1:78080056-78080075 None:intergenic 75.0%
ACGGCGGTGGGTCCTCCTCC+TGG - chr1_1:78080057-78080076 None:intergenic 75.0%
!!! GCCGGCTTGGGTGGCGGAGG+AGG - chr1_1:78079977-78079996 None:intergenic 80.0%
!!! GTGGCCGGCTTGGGTGGCGG+AGG - chr1_1:78079980-78079999 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78079656 78085718 78079656 ID=Msa0046070;Name=Msa0046070
chr1_1 mRNA 78079656 78085718 78079656 ID=Msa0046070-mRNA-1;Parent=Msa0046070;Name=Msa0046070-mRNA-1;_AED=0.13;_eAED=0.13;_QI=267|1|1|1|1|1|16|320|681
chr1_1 exon 78079656 78080267 78079656 ID=Msa0046070-mRNA-1:exon:26749;Parent=Msa0046070-mRNA-1
chr1_1 exon 78080420 78080533 78080420 ID=Msa0046070-mRNA-1:exon:26750;Parent=Msa0046070-mRNA-1
chr1_1 exon 78080629 78080702 78080629 ID=Msa0046070-mRNA-1:exon:26751;Parent=Msa0046070-mRNA-1
chr1_1 exon 78081029 78081098 78081029 ID=Msa0046070-mRNA-1:exon:26752;Parent=Msa0046070-mRNA-1
chr1_1 exon 78081177 78081232 78081177 ID=Msa0046070-mRNA-1:exon:26753;Parent=Msa0046070-mRNA-1
chr1_1 exon 78081971 78082042 78081971 ID=Msa0046070-mRNA-1:exon:26754;Parent=Msa0046070-mRNA-1
chr1_1 exon 78082200 78082294 78082200 ID=Msa0046070-mRNA-1:exon:26755;Parent=Msa0046070-mRNA-1
chr1_1 exon 78082393 78082459 78082393 ID=Msa0046070-mRNA-1:exon:26756;Parent=Msa0046070-mRNA-1
chr1_1 exon 78082591 78082720 78082591 ID=Msa0046070-mRNA-1:exon:26757;Parent=Msa0046070-mRNA-1
chr1_1 exon 78082812 78083030 78082812 ID=Msa0046070-mRNA-1:exon:26758;Parent=Msa0046070-mRNA-1
chr1_1 exon 78083144 78083274 78083144 ID=Msa0046070-mRNA-1:exon:26759;Parent=Msa0046070-mRNA-1
chr1_1 exon 78083403 78083577 78083403 ID=Msa0046070-mRNA-1:exon:26760;Parent=Msa0046070-mRNA-1
chr1_1 exon 78083664 78083754 78083664 ID=Msa0046070-mRNA-1:exon:26761;Parent=Msa0046070-mRNA-1
chr1_1 exon 78084834 78084991 78084834 ID=Msa0046070-mRNA-1:exon:26762;Parent=Msa0046070-mRNA-1
chr1_1 exon 78085067 78085255 78085067 ID=Msa0046070-mRNA-1:exon:26763;Parent=Msa0046070-mRNA-1
chr1_1 exon 78085339 78085718 78085339 ID=Msa0046070-mRNA-1:exon:26764;Parent=Msa0046070-mRNA-1
chr1_1 five_prime_UTR 78079656 78079922 78079656 ID=Msa0046070-mRNA-1:five_prime_utr;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78079923 78080267 78079923 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78080420 78080533 78080420 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78080629 78080702 78080629 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78081029 78081098 78081029 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78081177 78081232 78081177 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78081971 78082042 78081971 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78082200 78082294 78082200 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78082393 78082459 78082393 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78082591 78082720 78082591 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78082812 78083030 78082812 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78083144 78083274 78083144 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78083403 78083577 78083403 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78083664 78083754 78083664 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78084834 78084991 78084834 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78085067 78085255 78085067 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 CDS 78085339 78085398 78085339 ID=Msa0046070-mRNA-1:cds;Parent=Msa0046070-mRNA-1
chr1_1 three_prime_UTR 78085399 78085718 78085399 ID=Msa0046070-mRNA-1:three_prime_utr;Parent=Msa0046070-mRNA-1
Gene Sequence

>Msa0046070

ATGCCTCAGCTTCGTAGTGGTGTTCGACGTCCTCGTCCTGCTGCTCCTTCTCCTCCTCCGCCACCCAAGCCGGCCACCAGAGGTAGACCCAGAACTAGATTAGCCGCCGCCAAGAACATCAACAAATCATCCCAGGAGGAGGACCCACCGCCGTTGTTATTACAACCTGATACTTTCGTTGTTGAACCTCCCAAAGAGAACATAGTAATTGAACAAGAAGAAGAAGAAGAAGAAGAAGCTGTTGGTGTGATGGGTGATGAAAGAGTTGGTCTCAGTGCTAATAAAGATAAGGCTGTTGCTGCTGTTCCCGAGGAAGATGCCAACTCTCCACCTCTTCCAGAGAGGGTTCAAGTAGGAGGATCGCCTCTATACAAGGTAGAAAGGAAACTTGGTAAAGGTGGATTTGGCCAGGTTTTTGTTGGCCGTCGTGAGCGTGCAAATGCACCAGGAGCCGTCGAGGTTGCTCTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACCCTTGGTGGTAGTCATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATGTGATGGTTATGGACATTCTTGGTCCAAGTTTGTGGGATGTATGGAATACCTCAGGCCAGTCGATGTCTCCTGAAATGGTCTCATGTATAGCTGTCGAGTCATTATCAATACTTGAAAAGTTGCATGCAAAAGGTTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTAGGCCAGCCCAACACAGCACAGGAGAAGAAATTGTTTCTTGTTGACCTTGGTTTAGCAACAAAGTGGAAAGATTCGTCAAGTGGAAAGCACACTGAATACGATCAACGCCCCGACATGTTTAGAGGGACTGTTCGATATGCTAGCGTTCATGCTCATTTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCACTTGCATATACACTAATCTTCCTTCATAGGGGTCGATTGCCATGGCAAGGTTTTCAGGGTGATGGCAAATCCTTCCTCGTTTGCAAAAAGAAAATGGGAACATCTGCTGAGATGCTGTGCTGCTTTTGCCCCGCTCCTTTTAAACAATTTCTCGAGACTGTGGTGAACATGAAGTTTGATGAAGAACCTAACTATTCCAAGCTAATATCCTTGTTTGATGGTATGCTCGGACCTAATCCTGCATTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATGTTGAGGCAGATGATGATTCACAGCCCAAAAAGAAGGTTCGTTCAGGGATTCCTGCTTCGCAATGGATTTCAGTGTACAATGCTAGACAACCAATGAAACAAAGGTACCATTACAATGTGGCTGATGGAAGATTAGCACAGCATATTGAGAGAGGGATTGCAGACGACCTTCTTATTAGCTGTGTATCATGTTGTTCCAATCTCTGGGCACTTATAATGGATGCTGGAACTAATTATTCGGCTCAAGTTTACAAATTATCACCATTATTTTTACACAAGGAATGGATCTTGGAACAATGGGATAAGAATTTCTACATTACTTCTATTGCAGGGGCCAGTAATGGAAGCTCTGTTGTGGTGATGTCAAAAGGTACAAGGTATACTCAACAATCATACAAAGTAAGCGAATCTTTCCCCTACAAATGGATAAACAAGAAGTGGAAAGAAGGTTTTCATGTCACCTCAATGGGTACTGCTGGAAATCGCTGGGGTATTGTTATGTCTCGCAACGCTGGATTCAGTGATCAGGTGGTGGAACTTGATTTTCTCTATCCAAGTGAAGGCATCCATAAACGTTGGGATAATGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATCTGCGCTTATATTAAGCATCCCGAGGAACAGACCTGGTGATGAAACTCAGGAAACTCTGCGTACATCTCAATTTCCCAGCGCTCATGTTAAGGAAAAATGGTCAAAAAACCTTTATCTTGCCCATTTGTGCTATGGGCGCACAGTATGCTGA
Protein sequence

>Msa0046070

MPQLRSGVRRPRPAAPSPPPPPKPATRGRPRTRLAAAKNINKSSQEEDPPPLLLQPDTFVVEPPKENIVIEQEEEEEEEAVGVMGDERVGLSANKDKAVAAVPEEDANSPPLPERVQVGGSPLYKVERKLGKGGFGQVFVGRRERANAPGAVEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDILGPSLWDVWNTSGQSMSPEMVSCIAVESLSILEKLHAKGYVHGDVKPENFLLGQPNTAQEKKLFLVDLGLATKWKDSSSGKHTEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGFQGDGKSFLVCKKKMGTSAEMLCCFCPAPFKQFLETVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNVEADDDSQPKKKVRSGIPASQWISVYNARQPMKQRYHYNVADGRLAQHIERGIADDLLISCVSCCSNLWALIMDAGTNYSAQVYKLSPLFLHKEWILEQWDKNFYITSIAGASNGSSVVVMSKGTRYTQQSYKVSESFPYKWINKKWKEGFHVTSMGTAGNRWGIVMSRNAGFSDQVVELDFLYPSEGIHKRWDNGYRITATAATLDQSALILSIPRNRPGDETQETLRTSQFPSAHVKEKWSKNLYLAHLCYGRTVC*