AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046330 MtrunA17_Chr1g0200641 97.974 1086 5 3 1 1070 1 1085 0.0 2182
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046330 AT1G76850.1 63.562 1106 348 14 1 1069 1 1088 0.0 1369
Msa0046330 AT1G21170.1 63.536 1086 344 13 2 1052 4 1072 0.0 1353
Msa0046330 AT1G21170.2 62.740 1095 347 13 2 1052 4 1081 0.0 1348

Find 269 sgRNAs with CRISPR-Local

Find 1204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTTCTGCATTGGCTAAAA+AGG 0.206585 1_1:+78381761 Msa0046330:CDS
TCCATCATATACCAGCTTTC+TGG 0.223581 1_1:+78385957 Msa0046330:CDS
AACTTTATTTGCAGAACTAT+TGG 0.226296 1_1:-78386345 None:intergenic
CCTCTTCAAGAACACGTTTC+AGG 0.240737 1_1:-78384193 None:intergenic
GATCTTGTAATTTGTTTCTC+AGG 0.252991 1_1:+78390875 Msa0046330:CDS
CTTGCATCGGATGTGAAATA+TGG 0.260777 1_1:-78394430 None:intergenic
CCCACCTGGCGTTCGAATAA+AGG 0.262738 1_1:-78383644 None:intergenic
GCTTCTCCAGATGGCGTTAA+AGG 0.264551 1_1:+78378828 Msa0046330:CDS
CATTGCAACCAGAGATTATA+AGG 0.265405 1_1:+78387824 Msa0046330:CDS
AGTGAGGTTATTGTTGGATT+TGG 0.275962 1_1:+78384996 Msa0046330:CDS
TTATAAGGATTTATGTTCTA+AGG 0.283456 1_1:+78387839 Msa0046330:CDS
TTGATTGTACTAAGCAATAT+TGG 0.288802 1_1:+78389457 Msa0046330:CDS
ACGAGTTATCTGTTGAATTC+TGG 0.300147 1_1:+78391589 Msa0046330:CDS
GCTTCAAGTGTATACCCATT+AGG 0.301974 1_1:-78389376 None:intergenic
GTAGGGAGAGTAGGCAGATT+TGG 0.302869 1_1:-78395013 None:intergenic
TAGGCAGATTTGGCAGGTTC+TGG 0.305960 1_1:-78395003 None:intergenic
GTCTTTACAAGGACTACTTT+TGG 0.327934 1_1:+78394465 Msa0046330:CDS
CTTTGCAGAATCCATTCCTT+TGG 0.331913 1_1:+78394972 Msa0046330:CDS
TGCTGGTGCTAAACCTCTCT+TGG 0.332794 1_1:+78392857 Msa0046330:CDS
ACAGCTGAGCGGAATGTTAA+AGG 0.335517 1_1:-78387970 None:intergenic
ACAACTCTCCCTTTCGTTTG+AGG 0.340372 1_1:-78378973 None:intergenic
ATTCTTGAATTTCTTGAAGT+TGG 0.343173 1_1:-78389095 None:intergenic
GAAGCAGCTCCTCCGGTTGC+AGG 0.347304 1_1:+78387713 Msa0046330:CDS
TGGGAAGTCCCAGACCCTTC+AGG 0.349609 1_1:-78383569 None:intergenic
TACAACAATAAATACATAAT+AGG 0.351215 1_1:-78395162 None:intergenic
AGCTGAATTTCTGTAGCCTT+TGG 0.356308 1_1:+78395379 Msa0046330:three_prime_UTR
GAAGGTTCCCATTTCCCTAA+TGG 0.356437 1_1:+78389361 Msa0046330:CDS
GTGTATACCCATTAGGGAAA+TGG 0.356752 1_1:-78389369 None:intergenic
AAGGTTCCCATTTCCCTAAT+GGG 0.357326 1_1:+78389362 Msa0046330:CDS
GCAAACAAACTAAAAGAATA+GGG 0.361753 1_1:-78395140 None:intergenic
CGAGGGAGGAGGATCGGACT+TGG 0.367427 1_1:+78379109 Msa0046330:CDS
CTTCAAGTGTATACCCATTA+GGG 0.367616 1_1:-78389375 None:intergenic
ATCTAAAGCATGCGCAGCTT+TGG 0.368698 1_1:+78387682 Msa0046330:CDS
GAAAATGCACCTTCTGATCT+TGG 0.374744 1_1:+78389403 Msa0046330:CDS
ATGGCATTATTTGAATATAC+AGG 0.376714 1_1:+78385038 Msa0046330:CDS
GAGGATGACCCTGAAGGGTC+TGG 0.381558 1_1:+78383560 Msa0046330:CDS
ATGACAAATACCGACATATC+TGG 0.383194 1_1:+78389512 Msa0046330:CDS
GTGAATATGATTTGGCTGTC+AGG 0.383310 1_1:+78383851 Msa0046330:CDS
ATATTCAAATAATGCCATAC+TGG 0.383823 1_1:-78385033 None:intergenic
CTTGAATAATATTAAACAAA+TGG 0.384359 1_1:-78383589 None:intergenic
TCAGCATCCTTGTCAGTCTT+AGG 0.388138 1_1:-78382035 None:intergenic
TTCTTGAATCTGCTTCCATC+TGG 0.388412 1_1:-78385727 None:intergenic
TAGCAAGGGTGAATATGATT+TGG 0.391838 1_1:+78383843 Msa0046330:CDS
ATTGCTCCTTTAACGCCATC+TGG 0.396626 1_1:-78378834 None:intergenic
TGTGTTGATCCACTAGGTTT+GGG 0.397098 1_1:+78381825 Msa0046330:CDS
GCAGAGAAAGCAGTTGGTTA+AGG 0.397647 1_1:+78383261 Msa0046330:CDS
TTTCTTCTCTTTGTTTGTAA+AGG 0.399827 1_1:+78395236 Msa0046330:three_prime_UTR
TTGCAAAAGTATATTGTTCA+AGG 0.400874 1_1:-78390913 None:intergenic
TAGTCCTTGTAAAGACTTCA+AGG 0.401119 1_1:-78394458 None:intergenic
CTTCTCTTTGTTTGTAAAGG+TGG 0.401459 1_1:+78395239 Msa0046330:three_prime_UTR
GGCAAACAAACTAAAAGAAT+AGG 0.405775 1_1:-78395141 None:intergenic
GCCGGAGGCGCTGAGCGTTT+CGG 0.405968 1_1:-78378940 None:intergenic
TCAGGATGCTTCGATCCTTA+AGG 0.408044 1_1:+78389040 Msa0046330:intron
TGTTGAATTCTGGCATTCAA+TGG 0.410122 1_1:+78391599 Msa0046330:CDS
GAATACAGTGAGGTTATTGT+TGG 0.410142 1_1:+78384990 Msa0046330:CDS
TCCAGAGGTACATATAATAC+TGG 0.410568 1_1:+78395069 Msa0046330:CDS
ATGTGTTGATCCACTAGGTT+TGG 0.412170 1_1:+78381824 Msa0046330:CDS
CATTTGTTTAATATTATTCA+AGG 0.415540 1_1:+78383590 Msa0046330:CDS
ATGTTCTAAGGCTTTGCTCT+TGG 0.421779 1_1:+78387851 Msa0046330:CDS
AGCAAACTTTCCACTGAAAA+CGG 0.428323 1_1:-78385993 None:intergenic
ACATTTGTTATATCTATGTT+CGG 0.429094 1_1:-78384269 None:intergenic
TGCTTTAGATATATCTTCAA+TGG 0.429528 1_1:-78387669 None:intergenic
GTACAATCAATAACTGTTGA+TGG 0.430845 1_1:-78389444 None:intergenic
TGACCTGGAGGCTGGTGCGC+TGG 0.431040 1_1:+78383207 Msa0046330:CDS
CCCTTTCGTTTGAGGTTTCG+CGG 0.434697 1_1:-78378965 None:intergenic
GTTTGAGGTTTCGCGGTGGC+CGG 0.435052 1_1:-78378958 None:intergenic
TGTATACCCATTAGGGAAAT+GGG 0.437954 1_1:-78389368 None:intergenic
GAGCGTATTGGAATTGAACT+TGG 0.440323 1_1:+78389319 Msa0046330:CDS
TTGAATAATATTAAACAAAT+GGG 0.441605 1_1:-78383588 None:intergenic
TTGCTTACAATTAACTCGTC+TGG 0.443329 1_1:-78394601 None:intergenic
TCAGGTAATTTAGAGCGTAT+TGG 0.444817 1_1:+78389307 Msa0046330:intron
TCTCATTCAGTAGATCTAAC+TGG 0.446879 1_1:+78385878 Msa0046330:CDS
TCCGCTCAAGTTCTGATTGA+AGG 0.448790 1_1:-78394930 None:intergenic
AGCCAGAGTCGGACCCAGTA+TGG 0.449828 1_1:+78385019 Msa0046330:CDS
CCGGTGAATGTGAACGGAAT+GGG 0.450523 1_1:-78378756 None:intergenic
ACATAAATCCTTATAATCTC+TGG 0.450739 1_1:-78387832 None:intergenic
GACAAAACTGAGTGCACTTA+CGG 0.456664 1_1:-78395327 None:intergenic
GTTGAATTCTGGCATTCAAT+GGG 0.457990 1_1:+78391600 Msa0046330:CDS
TCCAGTATTATATGTACCTC+TGG 0.459008 1_1:-78395070 None:intergenic
ACCGAAACGCTCAGCGCCTC+CGG 0.459974 1_1:+78378939 Msa0046330:CDS
GCGTTCGAATAAAGGCTTCA+AGG 0.466972 1_1:-78383636 None:intergenic
AGGTGGATGGTCTAAGAGGA+AGG 0.468303 1_1:+78385906 Msa0046330:CDS
TCTTTGACAGCTTGCTCGTA+GGG 0.470249 1_1:+78381668 Msa0046330:intron
TGAGGATAATGTTAAAGATC+AGG 0.473475 1_1:+78379047 Msa0046330:CDS
CTTAGATCACTGGATACAAA+TGG 0.474934 1_1:+78392957 Msa0046330:CDS
TGAGCGGACACGCATTAATA+CGG 0.475246 1_1:+78394945 Msa0046330:CDS
GGGAAGTCCCAGACCCTTCA+GGG 0.475703 1_1:-78383568 None:intergenic
CCCATTCCGTTCACATTCAC+CGG 0.477098 1_1:+78378756 Msa0046330:five_prime_UTR
TAATACAAGTGCTGCTGACC+TGG 0.477555 1_1:+78383192 Msa0046330:CDS
TTGCATCGGATGTGAAATAT+GGG 0.478703 1_1:-78394429 None:intergenic
GGAGAGTAGGCAGATTTGGC+AGG 0.481462 1_1:-78395009 None:intergenic
AGAATCCATTGAGTTCTTGT+AGG 0.482133 1_1:-78395031 None:intergenic
CTCCGGCGAGGGAGGAGGAT+CGG 0.483522 1_1:+78379103 Msa0046330:CDS
TGGAAGAACTCCGGCGAGGG+AGG 0.484878 1_1:+78379095 Msa0046330:CDS
GAAGAGGTGGATGGTCTAAG+AGG 0.486145 1_1:+78385902 Msa0046330:CDS
AGGATGACCCTGAAGGGTCT+GGG 0.487794 1_1:+78383561 Msa0046330:CDS
CTCGTAGGGTTCGTGAAATG+AGG 0.487800 1_1:+78381682 Msa0046330:CDS
ATCTTGTAATTTGTTTCTCA+GGG 0.488409 1_1:+78390876 Msa0046330:CDS
GCGTAACGAGTTGCATGAAA+AGG 0.489136 1_1:+78385692 Msa0046330:CDS
TGAGTTCTTGTAGGGAGAGT+AGG 0.491441 1_1:-78395022 None:intergenic
AGTGCTGCTGACCTGGAGGC+TGG 0.492005 1_1:+78383199 Msa0046330:CDS
AATGAAGGAAGCAGCTCCTC+CGG 0.493395 1_1:+78387706 Msa0046330:CDS
TGCCATACTGGGTCCGACTC+TGG 0.493611 1_1:-78385021 None:intergenic
GTCAAAGTTAAGACGAATTG+AGG 0.495174 1_1:+78383541 Msa0046330:CDS
ATGCAAAATTGTTCTTATCA+CGG 0.498458 1_1:+78383161 Msa0046330:CDS
GACATATCTGGCAGCACTCC+AGG 0.500524 1_1:+78389524 Msa0046330:CDS
CTTCACTACCGCGAGTTGCC+CGG 0.501123 1_1:-78394540 None:intergenic
AAGCCAGCGCACCAGCCTCC+AGG 0.501540 1_1:-78383210 None:intergenic
ATTGAGGCTGTCGACAATCC+AGG 0.501755 1_1:+78394508 Msa0046330:CDS
TACAATCAATAACTGTTGAT+GGG 0.504051 1_1:-78389443 None:intergenic
GTCCGATCCTCCTCCCTCGC+CGG 0.505168 1_1:-78379105 None:intergenic
ACTATTGGAATTTGAATCTG+TGG 0.506633 1_1:-78386330 None:intergenic
GGCAGGTAAGAGATTGCATA+TGG 0.507024 1_1:-78387949 None:intergenic
CTAAGCAAAATAATTGAAAG+TGG 0.507680 1_1:+78378634 None:intergenic
CTAGGTTCTCACTTTAACTG+CGG 0.509381 1_1:-78391632 None:intergenic
AAGAACTCCGGCGAGGGAGG+AGG 0.509737 1_1:+78379098 Msa0046330:CDS
TCCAGAAAGCTGGTATATGA+TGG 0.509908 1_1:-78385958 None:intergenic
ATGCTGCCACGGATAGTACT+TGG 0.513356 1_1:-78383820 None:intergenic
GAAACTCGTCACTGCTTCGC+CGG 0.516299 1_1:-78378775 None:intergenic
TTCTTTGACAGCTTGCTCGT+AGG 0.517337 1_1:+78381667 Msa0046330:intron
TTTCTCAGGGCTCGAAGAGA+AGG 0.521113 1_1:+78390889 Msa0046330:CDS
CCTCTCTTGGATAAAACACT+TGG 0.521773 1_1:+78392870 Msa0046330:CDS
GAATCCATTGAGTTCTTGTA+GGG 0.521914 1_1:-78395030 None:intergenic
GAACATTCTTTCTTCCTCCC+CGG 0.522760 1_1:+78378670 Msa0046330:five_prime_UTR
TCAACATACCAGCAAAATCC+AGG 0.522820 1_1:-78389146 None:intergenic
TAGGTTCTCACTTTAACTGC+GGG 0.523038 1_1:-78391631 None:intergenic
CCTGAAACGTGTTCTTGAAG+AGG 0.525268 1_1:+78384193 Msa0046330:CDS
GGAACCTCTGTAGCATCCCT+TGG 0.525564 1_1:-78383780 None:intergenic
GAGTGGAAGAACTCCGGCGA+GGG 0.526418 1_1:+78379092 Msa0046330:CDS
AGATAATTGATACCTGCAAC+CGG 0.526500 1_1:-78387725 None:intergenic
TGATTACAGCGGTCAATCTA+CGG 0.528635 1_1:-78385934 None:intergenic
GAGGAAGAAAGAATGTTCAA+TGG 0.531113 1_1:-78378665 None:intergenic
GATTCCTTGAAGTCTTTACA+AGG 0.533917 1_1:+78394454 Msa0046330:CDS
ATGCGCAGCTTTGGAAATGA+AGG 0.534081 1_1:+78387691 Msa0046330:CDS
ATTAGACCACGAGGCCAGAA+TGG 0.534286 1_1:+78385662 Msa0046330:CDS
GCCGGTGAATGTGAACGGAA+TGG 0.534429 1_1:-78378757 None:intergenic
AAGTACAGATCTTAGATCAC+TGG 0.535206 1_1:+78392947 Msa0046330:CDS
GTTGCCCGGCGATTATGTCC+TGG 0.536046 1_1:-78394526 None:intergenic
TGAGGTTTCGCGGTGGCCGG+AGG 0.536535 1_1:-78378955 None:intergenic
CACCCTTGCTAATGCTGCCA+CGG 0.538730 1_1:-78383831 None:intergenic
GAGGGAGGAGGATCGGACTT+GGG 0.538835 1_1:+78379110 Msa0046330:CDS
CCGCGAAACCTCAAACGAAA+GGG 0.540947 1_1:+78378965 Msa0046330:CDS
ATGAGACTGGACCGCAGGAT+AGG 0.543692 1_1:-78385861 None:intergenic
CTCTCCCTACAAGAACTCAA+TGG 0.545102 1_1:+78395026 Msa0046330:CDS
TTATTGTTTCAATTCTTGAA+AGG 0.545710 1_1:+78387917 Msa0046330:CDS
AATTATTACCTCTGCATGAA+CGG 0.546306 1_1:-78391820 None:intergenic
GAGGAGGATCGGACTTGGGA+TGG 0.549780 1_1:+78379114 Msa0046330:CDS
ACAATCCAGGACATAATCGC+CGG 0.556846 1_1:+78394521 Msa0046330:CDS
TTAGATCTACTGAATGAGAC+TGG 0.557803 1_1:-78385874 None:intergenic
GAAGCCTTTATTCGAACGCC+AGG 0.558193 1_1:+78383640 Msa0046330:CDS
TGAATATGATTTGGCTGTCA+GGG 0.558997 1_1:+78383852 Msa0046330:CDS
AGCGTATTGGAATTGAACTT+GGG 0.559889 1_1:+78389320 Msa0046330:CDS
AATGCACCTTCTGATCTTGG+AGG 0.560054 1_1:+78389406 Msa0046330:CDS
GCACCTTCTGATCTTGGAGG+AGG 0.561034 1_1:+78389409 Msa0046330:CDS
TGGCATCACTCATGTAGGAC+CGG 0.561726 1_1:-78387649 None:intergenic
GGCTGTCAGGGAGTACAAGA+AGG 0.563980 1_1:+78383864 Msa0046330:CDS
AGTGCAACCTTCCAGAAAGC+TGG 0.564155 1_1:-78385968 None:intergenic
GGTTGAACGTAGTTAGCGAC+GGG 0.564760 1_1:-78378904 None:intergenic
TGGCACAGAGTCCAAAGGAA+TGG 0.565248 1_1:-78394983 None:intergenic
ACACTTGGCATTCTCGTGGA+AGG 0.565824 1_1:+78392885 Msa0046330:CDS
TCGTCGAAGAATCGAGGGAG+TGG 0.566173 1_1:+78379075 Msa0046330:CDS
ACCGCGAAACCTCAAACGAA+AGG 0.566816 1_1:+78378964 Msa0046330:CDS
AGGCTCTTTCTGATGCCAGA+TGG 0.567609 1_1:+78385712 Msa0046330:CDS
CTCAGCTGTATCTTCAGCAA+TGG 0.568432 1_1:+78387984 Msa0046330:CDS
TAGAGGAATCAAATGTCCTC+CGG 0.571367 1_1:+78387630 Msa0046330:CDS
TTTACTGTGCACACATCCAA+AGG 0.572874 1_1:-78395395 None:intergenic
TATCCGTGGCAGCATTAGCA+AGG 0.572993 1_1:+78383828 Msa0046330:CDS
AGGTGTCGAAGGATGTCTCA+TGG 0.575149 1_1:+78387893 Msa0046330:CDS
ACAGTCATTCCCTCGTGGCA+TGG 0.576315 1_1:+78381800 Msa0046330:CDS
TAGTATTTCTAGCGGTGATG+AGG 0.576767 1_1:+78379029 Msa0046330:CDS
AGATCTAACTGGTGAAGAGG+TGG 0.577494 1_1:+78385889 Msa0046330:CDS
TATTCAAGGAGTTAGTTCGC+AGG 0.578647 1_1:+78383604 Msa0046330:CDS
TGAAGACGAGCTTCTCCAGA+TGG 0.579001 1_1:+78378819 Msa0046330:CDS
GAGCGTTTCGGTTGAGACGA+CGG 0.579201 1_1:-78378928 None:intergenic
TTTCAGTGGAAAGTTTGCTA+AGG 0.579251 1_1:+78385997 Msa0046330:CDS
CTGAGCGGAATGTTAAAGGC+AGG 0.579566 1_1:-78387966 None:intergenic
TAACATATTTCATGATCTAG+AGG 0.579770 1_1:+78387613 Msa0046330:CDS
GTTGGATTTGGAGCCAGAGT+CGG 0.580175 1_1:+78385008 Msa0046330:CDS
CAGTAGGTTTATACATGAGA+GGG 0.581536 1_1:-78383904 None:intergenic
TACTGAGCAGAGAAAGCAGT+TGG 0.581539 1_1:+78383255 Msa0046330:CDS
CGAATTGAGGATGACCCTGA+AGG 0.581739 1_1:+78383554 Msa0046330:CDS
CTTCAAGGAATCTCTTGCAT+CGG 0.582627 1_1:-78394443 None:intergenic
CGTTGCAGCAGATCTGATCA+AGG 0.582698 1_1:-78391569 None:intergenic
GGATCGGACTTGGGATGGTG+AGG 0.584375 1_1:+78379119 Msa0046330:CDS
AGTAGATCTAACTGGTGAAG+AGG 0.584520 1_1:+78385886 Msa0046330:CDS
AGTGCACTTACGGTTTATTG+TGG 0.584549 1_1:-78395317 None:intergenic
AACGGAATGGGATAGAGAAG+AGG 0.588027 1_1:-78378744 None:intergenic
CCTCTGGAGGATGATCTGCT+TGG 0.588484 1_1:-78395054 None:intergenic
TATTCAAATAATGCCATACT+GGG 0.589618 1_1:-78385032 None:intergenic
CAATCCAGGACATAATCGCC+GGG 0.591192 1_1:+78394522 Msa0046330:CDS
AGGAGAACTGTCTGAAGACT+CGG 0.593578 1_1:-78382015 None:intergenic
TTGGTAGGTTGAAAAGTGTA+CGG 0.593735 1_1:-78383801 None:intergenic
ATCAGTTGAAGAGGTGTCGA+AGG 0.598476 1_1:+78387882 Msa0046330:CDS
AATACTAAGCATCTCCACTT+CGG 0.599165 1_1:-78379013 None:intergenic
GGAAACAAGGACGGCACCTG+TGG 0.601069 1_1:+78381704 Msa0046330:CDS
TCATTGCGGAAACTTCATCA+AGG 0.604122 1_1:-78386406 None:intergenic
AGCCACTGAGAGTGTGATTG+AGG 0.604404 1_1:+78394492 Msa0046330:CDS
TTCAATGGCATCACTCATGT+AGG 0.604601 1_1:-78387654 None:intergenic
TGGAGTGCTGCCAGATATGT+CGG 0.606372 1_1:-78389522 None:intergenic
CTGTCCAAGGGATGCTACAG+AGG 0.607097 1_1:+78383776 Msa0046330:CDS
ACAGTAGGTTTATACATGAG+AGG 0.607437 1_1:-78383905 None:intergenic
CTATTGGAATTTGAATCTGT+GGG 0.607795 1_1:-78386329 None:intergenic
AGTAGAGTTGCTGCACACAT+TGG 0.607889 1_1:+78391794 Msa0046330:CDS
CATTGCGGAAACTTCATCAA+GGG 0.607952 1_1:-78386405 None:intergenic
TCTTGCACAGCAGTACAGCT+CGG 0.610056 1_1:+78394903 Msa0046330:CDS
TCCTTCAATCAGAACTTGAG+CGG 0.610264 1_1:+78394929 Msa0046330:CDS
TCATATACCAGCTTTCTGGA+AGG 0.610847 1_1:+78385961 Msa0046330:CDS
AGAGGGAAGAGCAATTGACT+TGG 0.611105 1_1:-78383887 None:intergenic
CAAGTCCATACCGTCGATTG+TGG 0.611201 1_1:-78383314 None:intergenic
TAAAACACTTGGCATTCTCG+TGG 0.611261 1_1:+78392881 Msa0046330:CDS
ACGCCTCCTCCAAGATCAGA+AGG 0.612055 1_1:-78389412 None:intergenic
TCGTAGGGTTCGTGAAATGA+GGG 0.612594 1_1:+78381683 Msa0046330:CDS
GGTGTCGAAGGATGTCTCAT+GGG 0.613077 1_1:+78387894 Msa0046330:CDS
GAACTTTACCCCAAACCTAG+TGG 0.615864 1_1:-78381834 None:intergenic
ACGAGGGAATGACTGTAAGT+AGG 0.616245 1_1:-78381793 None:intergenic
GTTACATCGTCGAAGAATCG+AGG 0.616508 1_1:+78379069 Msa0046330:CDS
ATTGGTAGCCGTTCATGCAG+AGG 0.617691 1_1:+78391812 Msa0046330:CDS
TCGAGGGAGTGGAAGAACTC+CGG 0.618008 1_1:+78379086 Msa0046330:CDS
GATGCGAGCATCAGTTGAAG+AGG 0.619132 1_1:+78387873 Msa0046330:CDS
GAATTGAGGATGACCCTGAA+GGG 0.619638 1_1:+78383555 Msa0046330:CDS
ACTGAATGAGACTGGACCGC+AGG 0.620192 1_1:-78385866 None:intergenic
CAACATAGCTCACACAGAGA+AGG 0.621313 1_1:+78389343 Msa0046330:CDS
ACAATCAATAACTGTTGATG+GGG 0.622342 1_1:-78389442 None:intergenic
GTGTTGATCCACTAGGTTTG+GGG 0.623025 1_1:+78381826 Msa0046330:CDS
TTCGTGAAATGAGGGAAACA+AGG 0.623993 1_1:+78381691 Msa0046330:CDS
CAAACAAACTAAAAGAATAG+GGG 0.624385 1_1:-78395139 None:intergenic
ATGGTGAGGAGCCTAGTCGT+TGG 0.625615 1_1:+78379133 Msa0046330:CDS
CGGTTGAACGTAGTTAGCGA+CGG 0.626399 1_1:-78378905 None:intergenic
CAGTTCTCCTAAGACTGACA+AGG 0.628505 1_1:+78382028 Msa0046330:CDS
TCACAACGAGATCTCAACTA+CGG 0.630699 1_1:+78378856 Msa0046330:CDS
GCTTCGCCGGTGAATGTGAA+CGG 0.632942 1_1:-78378762 None:intergenic
CTAACTGGTGAAGAGGTGGA+TGG 0.633022 1_1:+78385893 Msa0046330:CDS
TCAACATGCTTCCAACGACT+AGG 0.633271 1_1:-78379144 None:intergenic
TGAAATGAGGGAAACAAGGA+CGG 0.634069 1_1:+78381695 Msa0046330:CDS
TGATGACGATGATTCCGAAG+TGG 0.634924 1_1:+78378999 Msa0046330:CDS
CATAATCGCCGGGCAACTCG+CGG 0.635387 1_1:+78394532 Msa0046330:CDS
GTATTTCTTTAGATTCAGGT+AGG 0.638317 1_1:+78384167 Msa0046330:intron
TTACATCGTCGAAGAATCGA+GGG 0.640120 1_1:+78379070 Msa0046330:CDS
GGTTCTGGCACAGAGTCCAA+AGG 0.647265 1_1:-78394988 None:intergenic
AGTATTATATGTACCTCTGG+AGG 0.648034 1_1:-78395067 None:intergenic
ATCCGTGGCAGCATTAGCAA+GGG 0.649080 1_1:+78383829 Msa0046330:CDS
ATTCTGTCAACTCATGCTTG+AGG 0.649607 1_1:+78392980 Msa0046330:CDS
ATGGAATGTGTTGATCCACT+AGG 0.649820 1_1:+78381819 Msa0046330:CDS
TCTTGTAAAACCACAATCGA+CGG 0.650818 1_1:+78383304 Msa0046330:CDS
TTGAATTCTGGCATTCAATG+GGG 0.654428 1_1:+78391601 Msa0046330:CDS
GCTTCGATCCTTAAGGAGTG+AGG 0.661393 1_1:+78389047 Msa0046330:CDS
AGCCTCAATCACACTCTCAG+TGG 0.664610 1_1:-78394494 None:intergenic
CCAAGCAGATCATCCTCCAG+AGG 0.672103 1_1:+78395054 Msa0046330:CDS
AACCTACCAAGTACTATCCG+TGG 0.673497 1_1:+78383814 Msa0046330:CDS
TACAAGTGCTGCTGACCTGG+AGG 0.675876 1_1:+78383195 Msa0046330:CDS
TCACAGAATCAGAGAATACG+TGG 0.678297 1_1:+78385621 Msa0046330:intron
GAAGCATGTTGATGAAGCTG+AGG 0.682725 1_1:+78379155 Msa0046330:CDS
GCACTTGCAGATGATAAACA+AGG 0.685694 1_1:+78394565 Msa0046330:CDS
GAGATGCTTAGTATTTCTAG+CGG 0.697331 1_1:+78379021 Msa0046330:CDS
CATCACTCATGTAGGACCGG+AGG 0.702712 1_1:-78387646 None:intergenic
CGTTTCGGTTGAGACGACGG+CGG 0.702993 1_1:-78378925 None:intergenic
TACTTACAGTCATTCCCTCG+TGG 0.703042 1_1:+78381795 Msa0046330:CDS
TCAACACATTCCATGCCACG+AGG 0.705544 1_1:-78381810 None:intergenic
TATCAACAACTCCTATCCTG+CGG 0.706573 1_1:+78385850 Msa0046330:CDS
TAATTGATACCTGCAACCGG+AGG 0.710536 1_1:-78387722 None:intergenic
TGCCACGGATAGTACTTGGT+AGG 0.711375 1_1:-78383816 None:intergenic
GGAGTGGAAGAACTCCGGCG+AGG 0.715263 1_1:+78379091 Msa0046330:CDS
GCAACTCTACTGCTGCATCG+CGG 0.727604 1_1:-78391782 None:intergenic
CAACACATTCCATGCCACGA+GGG 0.730428 1_1:-78381809 None:intergenic
TTTCGTTTGAGGTTTCGCGG+TGG 0.749694 1_1:-78378962 None:intergenic
TTGCTGAAGATACAGCTGAG+CGG 0.772135 1_1:-78387981 None:intergenic
GCAGTGTACATTAGACCACG+AGG 0.779792 1_1:+78385653 Msa0046330:CDS
TATATGATGGATGATTACAG+CGG 0.782568 1_1:-78385945 None:intergenic
TGTAGCTTGAGAATACAGTG+AGG 0.785722 1_1:+78384980 Msa0046330:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAACAATGATAA+AGG - chr1_1:78383030-78383049 None:intergenic 10.0%
!! TTGAATAATATTAAACAAAT+GGG - chr1_1:78383591-78383610 None:intergenic 10.0%
!! AAATTAAGAAATAATTAATG+GGG - chr1_1:78385505-78385524 None:intergenic 10.0%
!!! GATTTTTTTTTTTTTTTTGA+AGG - chr1_1:78386133-78386152 None:intergenic 10.0%
!! TAAAATATATATTTATGTTG+TGG + chr1_1:78389555-78389574 Msa0046330:intron 10.0%
!! AATATGTGATAATTTAAATA+TGG + chr1_1:78394000-78394019 Msa0046330:intron 10.0%
!! TATACATATAATCATAATAT+GGG - chr1_1:78394105-78394124 None:intergenic 10.0%
!! ATATACATATAATCATAATA+TGG - chr1_1:78394106-78394125 None:intergenic 10.0%
!!! AAATATCTTTTAGAATCATT+TGG + chr1_1:78379874-78379893 Msa0046330:intron 15.0%
!!! TTATAGATTCATTTTTTAGA+AGG + chr1_1:78380120-78380139 Msa0046330:intron 15.0%
!! AATATAAGATTAGATTGATT+TGG - chr1_1:78380236-78380255 None:intergenic 15.0%
!! ATGCAATAATAATATAGTTT+CGG + chr1_1:78382236-78382255 Msa0046330:intron 15.0%
!!! GATGTTTAATTATTTGAAAT+CGG + chr1_1:78382529-78382548 Msa0046330:intron 15.0%
!! CTTGAATAATATTAAACAAA+TGG - chr1_1:78383592-78383611 None:intergenic 15.0%
!! CATTTGTTTAATATTATTCA+AGG + chr1_1:78383590-78383609 Msa0046330:CDS 15.0%
!!! TTTTTTATATGTTGATGATA+TGG + chr1_1:78384878-78384897 Msa0046330:intron 15.0%
!! TTGAAATAAGAAATATAGAA+TGG - chr1_1:78386223-78386242 None:intergenic 15.0%
!!! TGAAATTTGAGATATTTATA+GGG - chr1_1:78386530-78386549 None:intergenic 15.0%
!!! ATGAAATTTGAGATATTTAT+AGG - chr1_1:78386531-78386550 None:intergenic 15.0%
!!! ATTTAAGTTTTGTATTTTTC+AGG + chr1_1:78386629-78386648 Msa0046330:intron 15.0%
!!! TTTAAGTTTTGTATTTTTCA+GGG + chr1_1:78386630-78386649 Msa0046330:intron 15.0%
!!! TTTATTATAGCATTGTATTT+TGG + chr1_1:78386806-78386825 Msa0046330:intron 15.0%
!! AAATGTAGAAGTTTAAATTA+GGG - chr1_1:78386895-78386914 None:intergenic 15.0%
!! AAAATGTAGAAGTTTAAATT+AGG - chr1_1:78386896-78386915 None:intergenic 15.0%
!! ACTTACAAAAAAAAATTGTT+AGG - chr1_1:78387150-78387169 None:intergenic 15.0%
!!! GATTTTATGAAATTAGTTTT+AGG + chr1_1:78388565-78388584 Msa0046330:intron 15.0%
!! TTTCTTTATCTAGAAAAATA+TGG - chr1_1:78389199-78389218 None:intergenic 15.0%
!! TACAATGGAAAATATAATAT+GGG - chr1_1:78389583-78389602 None:intergenic 15.0%
!! TTACAATGGAAAATATAATA+TGG - chr1_1:78389584-78389603 None:intergenic 15.0%
!!! ATATTATATTTTCCATTGTA+AGG + chr1_1:78389583-78389602 Msa0046330:intron 15.0%
!!! TATTATATTTTCCATTGTAA+GGG + chr1_1:78389584-78389603 Msa0046330:intron 15.0%
!! AAATAATGTGATAGATATAA+AGG + chr1_1:78389643-78389662 Msa0046330:intron 15.0%
!! AGTAATATCATTATCTAATA+TGG + chr1_1:78390204-78390223 Msa0046330:intron 15.0%
!! GTAATATCATTATCTAATAT+GGG + chr1_1:78390205-78390224 Msa0046330:intron 15.0%
!!! CATTGTAATTATTGATTTTT+CGG + chr1_1:78391039-78391058 Msa0046330:intron 15.0%
!!! TACATATTAGGTTTTTATAT+TGG + chr1_1:78391253-78391272 Msa0046330:intron 15.0%
!!! ACATATTAGGTTTTTATATT+GGG + chr1_1:78391254-78391273 Msa0046330:intron 15.0%
!!! TAAACTGTCTTTTTTTATTA+TGG - chr1_1:78391423-78391442 None:intergenic 15.0%
!! AAAAAAATCATTTATACTTC+AGG - chr1_1:78393802-78393821 None:intergenic 15.0%
!! ATACATATAATCATAATATG+GGG - chr1_1:78394104-78394123 None:intergenic 15.0%
!! ATGATTATATGTATATATAG+AGG + chr1_1:78394110-78394129 Msa0046330:intron 15.0%
!! CTTATATCATTTATATTTCA+TGG + chr1_1:78394323-78394342 Msa0046330:intron 15.0%
!! TACAACAATAAATACATAAT+AGG - chr1_1:78395165-78395184 None:intergenic 15.0%
!!! TACCACATTTTAATAATTTT+TGG + chr1_1:78395270-78395289 Msa0046330:three_prime_UTR 15.0%
!!! ATGTTTTTTTCTTTTTCTTC+CGG - chr1_1:78378692-78378711 None:intergenic 20.0%
!! GAAGAAAACAAATAGAATAA+AGG - chr1_1:78379232-78379251 None:intergenic 20.0%
!! ATGTATATAATACTCAGTTT+GGG + chr1_1:78379301-78379320 Msa0046330:intron 20.0%
!! TATAGAAACATAATAAAGTC+TGG - chr1_1:78379916-78379935 None:intergenic 20.0%
!! TCTATATTTGTTTCCTTTAT+TGG + chr1_1:78379930-78379949 Msa0046330:intron 20.0%
!! TACTAATGTTAATCCAATAA+AGG - chr1_1:78379946-78379965 None:intergenic 20.0%
!! ACAATGAGTTATTATTTGAA+TGG - chr1_1:78380621-78380640 None:intergenic 20.0%
!!! TTAATAGTACTTGTTGAATT+GGG - chr1_1:78380800-78380819 None:intergenic 20.0%
!!! ATTAATAGTACTTGTTGAAT+TGG - chr1_1:78380801-78380820 None:intergenic 20.0%
!!! TCATATTTCTGCAATATATT+TGG + chr1_1:78380965-78380984 Msa0046330:intron 20.0%
!! AGTCGTAGTATATTAAAAAA+TGG - chr1_1:78381044-78381063 None:intergenic 20.0%
!!! TTCAACATTGACTATATATA+TGG - chr1_1:78381222-78381241 None:intergenic 20.0%
!! TAATATGCGTAATATTCTAA+CGG - chr1_1:78381602-78381621 None:intergenic 20.0%
!!! TCTGTTTAATTTAATGTAGT+TGG + chr1_1:78381642-78381661 Msa0046330:intron 20.0%
!!! CTGTTTAATTTAATGTAGTT+GGG + chr1_1:78381643-78381662 Msa0046330:intron 20.0%
!!! GAACTTTTTCTTTCAAATTT+TGG - chr1_1:78381747-78381766 None:intergenic 20.0%
!!! TTTTAAAGTCAGTTTCTTTA+TGG + chr1_1:78382114-78382133 Msa0046330:intron 20.0%
!! ACTTAATTTCACAAATACTA+AGG - chr1_1:78382386-78382405 None:intergenic 20.0%
!!! AATAGAGTCTTTTTCTAAAT+AGG + chr1_1:78382507-78382526 Msa0046330:intron 20.0%
!! AATAAAAAATATGACGACTA+GGG + chr1_1:78382642-78382661 Msa0046330:intron 20.0%
!! GGGTTATTTAAATCTATTAA+TGG - chr1_1:78382843-78382862 None:intergenic 20.0%
!! TGAAATTGTAATTAAGGAAA+GGG - chr1_1:78382864-78382883 None:intergenic 20.0%
!! ATGAAATTGTAATTAAGGAA+AGG - chr1_1:78382865-78382884 None:intergenic 20.0%
!! TTTCCTTAATTACAATTTCA+TGG + chr1_1:78382864-78382883 Msa0046330:intron 20.0%
!! TTCCTTAATTACAATTTCAT+GGG + chr1_1:78382865-78382884 Msa0046330:intron 20.0%
!! TATTATTATTTAAGCTCTTC+TGG + chr1_1:78383040-78383059 Msa0046330:intron 20.0%
!! TTAAAACATGTTTATCTTAG+AGG + chr1_1:78383968-78383987 Msa0046330:intron 20.0%
!! ATTCCATTTAAGCATATATT+AGG + chr1_1:78384060-78384079 Msa0046330:intron 20.0%
!! TTCCATTTAAGCATATATTA+GGG + chr1_1:78384061-78384080 Msa0046330:intron 20.0%
!!! ACATTTGTTATATCTATGTT+CGG - chr1_1:78384272-78384291 None:intergenic 20.0%
!!! TTTTTTCTTTTTCTGTTTGA+TGG + chr1_1:78384493-78384512 Msa0046330:intron 20.0%
!!! TTTTTCTTTTTCTGTTTGAT+GGG + chr1_1:78384494-78384513 Msa0046330:intron 20.0%
!! TTAAAGATTAAAAAGGAAGA+AGG - chr1_1:78385459-78385478 None:intergenic 20.0%
!! CTAAAAATTTGATGCTTAAA+GGG - chr1_1:78385540-78385559 None:intergenic 20.0%
!! TCTAAAAATTTGATGCTTAA+AGG - chr1_1:78385541-78385560 None:intergenic 20.0%
!!! ATTGCAAACAACTTTTAATT+CGG + chr1_1:78386021-78386040 Msa0046330:intron 20.0%
!!! TTTATTTTGATTCTGATTCA+AGG + chr1_1:78386077-78386096 Msa0046330:intron 20.0%
!!! TAAATGTTTTAGTCCATAAA+GGG - chr1_1:78386614-78386633 None:intergenic 20.0%
!!! TTAAATGTTTTAGTCCATAA+AGG - chr1_1:78386615-78386634 None:intergenic 20.0%
!! AATAAATAAATAAAGAGCCA+TGG - chr1_1:78386766-78386785 None:intergenic 20.0%
!!! GTATTTTGGCTTTTTATTTT+AGG + chr1_1:78386820-78386839 Msa0046330:intron 20.0%
!! TTAAAAGTTTAAATTTCACG+TGG + chr1_1:78386922-78386941 Msa0046330:intron 20.0%
!!! TGAATTTGGAGATTATTTTT+GGG + chr1_1:78386993-78387012 Msa0046330:intron 20.0%
!! AAAGAAAAAAAAACTGGATT+AGG - chr1_1:78387349-78387368 None:intergenic 20.0%
!! GAAAGAAAAGAAAAAAAAAC+TGG - chr1_1:78387355-78387374 None:intergenic 20.0%
!! TTATAAGGATTTATGTTCTA+AGG + chr1_1:78387839-78387858 Msa0046330:CDS 20.0%
!! TTATTGTTTCAATTCTTGAA+AGG + chr1_1:78387917-78387936 Msa0046330:CDS 20.0%
!! AACAACATTTATTGTATCTT+TGG - chr1_1:78388729-78388748 None:intergenic 20.0%
!!! AATCCTTTTCAGTAAATATT+TGG + chr1_1:78388776-78388795 Msa0046330:intron 20.0%
!! TCTAAGAATAGAGATAATAT+TGG - chr1_1:78389679-78389698 None:intergenic 20.0%
!! TTATCTCTATTCTTAGAATT+TGG + chr1_1:78389682-78389701 Msa0046330:intron 20.0%
!!! ATCATATTAGAATTTTCGTT+TGG + chr1_1:78390114-78390133 Msa0046330:intron 20.0%
!!! TCATATTAGAATTTTCGTTT+GGG + chr1_1:78390115-78390134 Msa0046330:intron 20.0%
!! ATTACTGTACTTGAATTATT+TGG - chr1_1:78390697-78390716 None:intergenic 20.0%
!!! CATTAAAATATTTTGAAGTC+AGG - chr1_1:78390764-78390783 None:intergenic 20.0%
!! CGAAAAATCAATAATTACAA+TGG - chr1_1:78391041-78391060 None:intergenic 20.0%
!!! TATGAAATTCTATTTTATCG+TGG + chr1_1:78391744-78391763 Msa0046330:intron 20.0%
!! TGCATCTTAAAAAAAAATGT+GGG - chr1_1:78391868-78391887 None:intergenic 20.0%
!! TTGCATCTTAAAAAAAAATG+TGG - chr1_1:78391869-78391888 None:intergenic 20.0%
!! TCAAAAGTAAATCTTGTAAT+CGG + chr1_1:78392037-78392056 Msa0046330:intron 20.0%
!! TGAAAATACTAAAAAGGAAA+TGG + chr1_1:78392348-78392367 Msa0046330:intron 20.0%
!!! TCTTCATATACTTTTTTTGT+GGG + chr1_1:78392589-78392608 Msa0046330:intron 20.0%
!! AATATAATACCATTAACACA+AGG - chr1_1:78392615-78392634 None:intergenic 20.0%
!!! TGAACATTCTAAAATGTAAA+CGG - chr1_1:78393064-78393083 None:intergenic 20.0%
!! TTAAAAAAATAGTGATTGCA+AGG - chr1_1:78393230-78393249 None:intergenic 20.0%
!! TTTAAATATGGCTACATAAA+AGG + chr1_1:78394012-78394031 Msa0046330:intron 20.0%
!! TATATGTATATATAGAGGAT+AGG + chr1_1:78394115-78394134 Msa0046330:intron 20.0%
!!! ATGTCAAGAAAACATTTTAT+TGG - chr1_1:78394271-78394290 None:intergenic 20.0%
!! GAAATGAATACTACATTAAT+CGG - chr1_1:78394627-78394646 None:intergenic 20.0%
!! TGAAAAATGGTTTAATTCTA+TGG + chr1_1:78394783-78394802 Msa0046330:intron 20.0%
!! TCTATGGAAAAGATTTATAT+CGG + chr1_1:78394799-78394818 Msa0046330:intron 20.0%
!! GTCCAAAAATTATTAAAATG+TGG - chr1_1:78395275-78395294 None:intergenic 20.0%
!!! TGTTTTTTTCTTTTTCTTCC+GGG - chr1_1:78378691-78378710 None:intergenic 25.0%
! CATGTATATAATACTCAGTT+TGG + chr1_1:78379300-78379319 Msa0046330:intron 25.0%
! TGTATATAATACTCAGTTTG+GGG + chr1_1:78379302-78379321 Msa0046330:intron 25.0%
! AACAAATGAGCTTAAAGTTT+AGG + chr1_1:78379805-78379824 Msa0046330:intron 25.0%
! AAAATGAATCTATAAAGCTC+CGG - chr1_1:78380115-78380134 None:intergenic 25.0%
! CTAATTCTCAGTATAAATGA+TGG + chr1_1:78380187-78380206 Msa0046330:intron 25.0%
!!! ATGGATAGTGCTTTTAATTT+AGG + chr1_1:78380206-78380225 Msa0046330:intron 25.0%
! CTATTGAAATTATAGGGTTT+GGG - chr1_1:78380287-78380306 None:intergenic 25.0%
! TACGTCCTATTGAAATTATA+GGG - chr1_1:78380293-78380312 None:intergenic 25.0%
! TTACGTCCTATTGAAATTAT+AGG - chr1_1:78380294-78380313 None:intergenic 25.0%
!!! TGCTAATTGATTTTTAGTCT+TGG + chr1_1:78380389-78380408 Msa0046330:intron 25.0%
!!! GTTTTAGAACTATGACATTA+TGG - chr1_1:78380426-78380445 None:intergenic 25.0%
! AATTGAAGAACAGTTAATAG+TGG + chr1_1:78380448-78380467 Msa0046330:intron 25.0%
! TGAGTTATTATTTGAATGGA+TGG - chr1_1:78380617-78380636 None:intergenic 25.0%
! TATTAATATCCCAATGAACT+TGG + chr1_1:78380814-78380833 Msa0046330:intron 25.0%
! ATTAATATCCCAATGAACTT+GGG + chr1_1:78380815-78380834 Msa0046330:intron 25.0%
! ATTACCTAATAAGTTCTACA+AGG + chr1_1:78380897-78380916 Msa0046330:intron 25.0%
!! TTTTAATATACTACGACTCT+TGG + chr1_1:78381046-78381065 Msa0046330:intron 25.0%
! CTAGTCACTATCTTAAAAAT+TGG + chr1_1:78381362-78381381 Msa0046330:intron 25.0%
!! TATCAGTGCTTTATTCATAT+TGG + chr1_1:78381569-78381588 Msa0046330:intron 25.0%
! ATTAAGAGAAAAAAATGCCT+AGG + chr1_1:78382287-78382306 Msa0046330:intron 25.0%
! GTATTTGTGAAATTAAGTGA+AGG + chr1_1:78382388-78382407 Msa0046330:intron 25.0%
! TTAGAATGCGAAAAGTTTAT+TGG + chr1_1:78382463-78382482 Msa0046330:intron 25.0%
!! AAAAAGACTCTATTTTGTAC+AGG - chr1_1:78382501-78382520 None:intergenic 25.0%
! GAATAAAAAATATGACGACT+AGG + chr1_1:78382641-78382660 Msa0046330:intron 25.0%
!! TGTCACTTAAATAAGAGTAT+AGG + chr1_1:78382697-78382716 Msa0046330:intron 25.0%
! GAAATTGTAATTAAGGAAAG+GGG - chr1_1:78382863-78382882 None:intergenic 25.0%
! ATCCCATGAAATTGTAATTA+AGG - chr1_1:78382870-78382889 None:intergenic 25.0%
!!! ATGGGATAAGATTTTGTTTA+TGG + chr1_1:78382883-78382902 Msa0046330:intron 25.0%
! ACTATTAGTATTTCCTAGAT+TGG + chr1_1:78382987-78383006 Msa0046330:intron 25.0%
! ATGCAAAATTGTTCTTATCA+CGG + chr1_1:78383161-78383180 Msa0046330:CDS 25.0%
! AATAAAAGACTACTTCTGTA+TGG - chr1_1:78383370-78383389 None:intergenic 25.0%
!! AGAAGTAGTCTTTTATTCTT+GGG + chr1_1:78383373-78383392 Msa0046330:intron 25.0%
! AGAGCTTCACATTAAAATAA+AGG - chr1_1:78383497-78383516 None:intergenic 25.0%
!!! GTGACTTTTTTTCTAGATTT+TGG + chr1_1:78383692-78383711 Msa0046330:intron 25.0%
!! TGGAATATGTTGTTTATTCA+TGG + chr1_1:78383712-78383731 Msa0046330:intron 25.0%
! AATCTTGAGAACAAAAATTC+AGG - chr1_1:78384024-78384043 None:intergenic 25.0%
! AAATGGAATCATTCTTGTAT+CGG - chr1_1:78384049-78384068 None:intergenic 25.0%
! TACCCTAATATATGCTTAAA+TGG - chr1_1:78384066-78384085 None:intergenic 25.0%
! AGTTGTATTTCTTTAGATTC+AGG + chr1_1:78384163-78384182 Msa0046330:intron 25.0%
! TAGTAGATACAGATCAAAAA+GGG - chr1_1:78384397-78384416 None:intergenic 25.0%
! ATAGTAGATACAGATCAAAA+AGG - chr1_1:78384398-78384417 None:intergenic 25.0%
!! AAAAGAAAGGCATAAATGAA+GGG + chr1_1:78384520-78384539 Msa0046330:intron 25.0%
! TTGAAAGCTATGTATTACAT+TGG + chr1_1:78384714-78384733 Msa0046330:intron 25.0%
! AATATAGTAATGTGACATTG+TGG + chr1_1:78384745-78384764 Msa0046330:intron 25.0%
! AAGTTAAAGATTTATTGCAG+TGG + chr1_1:78384906-78384925 Msa0046330:intron 25.0%
! TATTCAAATAATGCCATACT+GGG - chr1_1:78385035-78385054 None:intergenic 25.0%
! ATATTCAAATAATGCCATAC+TGG - chr1_1:78385036-78385055 None:intergenic 25.0%
! ATGGCATTATTTGAATATAC+AGG + chr1_1:78385038-78385057 Msa0046330:CDS 25.0%
! CATTATTTGAATATACAGGT+TGG + chr1_1:78385042-78385061 Msa0046330:intron 25.0%
! AACAACTCTAACAGTAAATA+GGG - chr1_1:78385313-78385332 None:intergenic 25.0%
! AAACAACTCTAACAGTAAAT+AGG - chr1_1:78385314-78385333 None:intergenic 25.0%
! CAAATAACTCTAACAGTAAA+TGG - chr1_1:78385383-78385402 None:intergenic 25.0%
!!! TAAGCATCAAATTTTTAGAG+TGG + chr1_1:78385542-78385561 Msa0046330:intron 25.0%
!!! TTTTTTTTTTTTGAAGGGAG+AGG - chr1_1:78386127-78386146 None:intergenic 25.0%
!! AACTTTATTTGCAGAACTAT+TGG - chr1_1:78386348-78386367 None:intergenic 25.0%
! AATAAAGTTGAAGAAAAAGC+TGG + chr1_1:78386359-78386378 Msa0046330:CDS 25.0%
!! ATTTTTACACCGGTAAAAAA+GGG - chr1_1:78386481-78386500 None:intergenic 25.0%
!!! TATTTTTACACCGGTAAAAA+AGG - chr1_1:78386482-78386501 None:intergenic 25.0%
!!! GTTTGGGTTAAATATGTTTT+TGG + chr1_1:78386503-78386522 Msa0046330:intron 25.0%
!! ATTTGTATGGACTAAAAAGT+GGG - chr1_1:78386569-78386588 None:intergenic 25.0%
!! AATTTGTATGGACTAAAAAG+TGG - chr1_1:78386570-78386589 None:intergenic 25.0%
!!! ATGCTGTTTTGTAATTTGTA+TGG - chr1_1:78386582-78386601 None:intergenic 25.0%
! GCTATAAATATCTCAAATCT+TGG - chr1_1:78386682-78386701 None:intergenic 25.0%
! CAATGTCGGAAAAATATATT+GGG - chr1_1:78386723-78386742 None:intergenic 25.0%
!! TTTTGGATATCATGTGAATT+TGG + chr1_1:78386979-78386998 Msa0046330:intron 25.0%
!! GTGAATTTGGAGATTATTTT+TGG + chr1_1:78386992-78387011 Msa0046330:intron 25.0%
! AAAAAAAAATTGTTAGGCTC+TGG - chr1_1:78387144-78387163 None:intergenic 25.0%
! TCTGAATAAACTAGTTATCT+TGG - chr1_1:78387204-78387223 None:intergenic 25.0%
!! AAAAAAACTGGATTAGGATT+TGG - chr1_1:78387343-78387362 None:intergenic 25.0%
! TAAACACTTCTCTAAATAAC+TGG - chr1_1:78387393-78387412 None:intergenic 25.0%
! ATTCAAAACCAATAGGAAAA+AGG - chr1_1:78387461-78387480 None:intergenic 25.0%
! TAAATTACTCGATTAGGATT+TGG - chr1_1:78387497-78387516 None:intergenic 25.0%
! AAATCCTAATCGAGTAATTT+AGG + chr1_1:78387496-78387515 Msa0046330:intron 25.0%
! TAACATATTTCATGATCTAG+AGG + chr1_1:78387613-78387632 Msa0046330:CDS 25.0%
!! TGCTTTAGATATATCTTCAA+TGG - chr1_1:78387672-78387691 None:intergenic 25.0%
! ACATAAATCCTTATAATCTC+TGG - chr1_1:78387835-78387854 None:intergenic 25.0%
! ATGTATTCATATTCAAAACC+TGG + chr1_1:78388099-78388118 Msa0046330:intron 25.0%
! TAGTTATTACAGTTTGTACT+TGG + chr1_1:78388181-78388200 Msa0046330:intron 25.0%
! AGTTATTACAGTTTGTACTT+GGG + chr1_1:78388182-78388201 Msa0046330:intron 25.0%
!! ACTTAGGTTATTCACAATTT+TGG + chr1_1:78388240-78388259 Msa0046330:intron 25.0%
!! CTTAGGTTATTCACAATTTT+GGG + chr1_1:78388241-78388260 Msa0046330:intron 25.0%
! TTGATGTATGAAACCATTAT+TGG - chr1_1:78388344-78388363 None:intergenic 25.0%
! ATTTAGTCAACTTAAACAGA+GGG - chr1_1:78388422-78388441 None:intergenic 25.0%
!!! GATATAAAATCATTTTGGCA+GGG - chr1_1:78388521-78388540 None:intergenic 25.0%
!!! TTAGTTTTAGGAAACACATT+AGG + chr1_1:78388577-78388596 Msa0046330:intron 25.0%
!! TAGTTAGAAATGTTAGTTTC+CGG - chr1_1:78388634-78388653 None:intergenic 25.0%
! GTGCATATCAAAAAACATAA+AGG + chr1_1:78388661-78388680 Msa0046330:intron 25.0%
! AATAAATATCAGACAGTAAG+AGG - chr1_1:78388834-78388853 None:intergenic 25.0%
! ATTATCGTAATGCGTTTAAT+AGG + chr1_1:78388929-78388948 Msa0046330:intron 25.0%
! ATTCTTGAATTTCTTGAAGT+TGG - chr1_1:78389098-78389117 None:intergenic 25.0%
!!! CGAATTTCTAGTTACAAAAT+TGG + chr1_1:78389268-78389287 Msa0046330:intron 25.0%
! TACAATCAATAACTGTTGAT+GGG - chr1_1:78389446-78389465 None:intergenic 25.0%
! TTGATTGTACTAAGCAATAT+TGG + chr1_1:78389457-78389476 Msa0046330:CDS 25.0%
!!! ATATATTTTAACAGCATACC+TGG - chr1_1:78389545-78389564 None:intergenic 25.0%
! CTATTCTTAGAATTTGGATT+TGG + chr1_1:78389688-78389707 Msa0046330:intron 25.0%
! GAAAAGTGGTTATAAACAAA+GGG - chr1_1:78389757-78389776 None:intergenic 25.0%
! TGAAAAGTGGTTATAAACAA+AGG - chr1_1:78389758-78389777 None:intergenic 25.0%
! CTTATACTGTCTTAGAATTT+AGG + chr1_1:78389895-78389914 Msa0046330:intron 25.0%
! ATCTATTCTTGATCCATTAT+AGG + chr1_1:78390331-78390350 Msa0046330:intron 25.0%
! TCTATTCTTGATCCATTATA+GGG + chr1_1:78390332-78390351 Msa0046330:intron 25.0%
! AAGCTGAGTTAACATAAATA+AGG + chr1_1:78390589-78390608 Msa0046330:intron 25.0%
! AGCTGAGTTAACATAAATAA+GGG + chr1_1:78390590-78390609 Msa0046330:intron 25.0%
!!! ATCTTGTAATTTGTTTCTCA+GGG + chr1_1:78390876-78390895 Msa0046330:CDS 25.0%
!! TTGCAAAAGTATATTGTTCA+AGG - chr1_1:78390916-78390935 None:intergenic 25.0%
!! TGAACAATATACTTTTGCAA+AGG + chr1_1:78390916-78390935 Msa0046330:CDS 25.0%
!!! AGAAGCATTTCATAATTGTA+TGG + chr1_1:78391064-78391083 Msa0046330:intron 25.0%
! TATATAGACAAACAATCAGT+TGG + chr1_1:78391121-78391140 Msa0046330:intron 25.0%
! AAACAATCAGTTGGAATAAT+AGG + chr1_1:78391130-78391149 Msa0046330:intron 25.0%
!! CTTTTACTTCTTAAATACCA+AGG + chr1_1:78391159-78391178 Msa0046330:intron 25.0%
! ATTCTACAGAAAACAATGTA+AGG + chr1_1:78391191-78391210 Msa0046330:intron 25.0%
! GTCTGAATTCAAATAGTTTA+TGG - chr1_1:78391390-78391409 None:intergenic 25.0%
! CAATAAACATTATTGTTGCT+AGG - chr1_1:78391653-78391672 None:intergenic 25.0%
!!! AAAGCGAAAATCATTTTAGT+CGG - chr1_1:78391701-78391720 None:intergenic 25.0%
!!! AATGATTTTCGCTTTGATTT+TGG + chr1_1:78391706-78391725 Msa0046330:intron 25.0%
!! ATTTTATCGTGGTTTCTTTT+AGG + chr1_1:78391755-78391774 Msa0046330:intron 25.0%
!! TTTTATCGTGGTTTCTTTTA+GGG + chr1_1:78391756-78391775 Msa0046330:intron 25.0%
! GTAATAATTGCATGTGATAA+GGG + chr1_1:78391834-78391853 Msa0046330:intron 25.0%
! CAAAAAATAAGCATTTGACT+TGG + chr1_1:78391886-78391905 Msa0046330:intron 25.0%
! TAAAAAAAAAATCCTTCGCT+AGG - chr1_1:78391944-78391963 None:intergenic 25.0%
! ATGGCTTAAAAAAAATCTCA+TGG - chr1_1:78391973-78391992 None:intergenic 25.0%
!! TGATTTTCTCAAATTACTAG+CGG + chr1_1:78392225-78392244 Msa0046330:intron 25.0%
!!! TTCCTTTTTAGTATTTTCAC+AGG - chr1_1:78392347-78392366 None:intergenic 25.0%
! TAAATCAAATAAAACTCAGG+CGG - chr1_1:78392388-78392407 None:intergenic 25.0%
! TGGTAAATCAAATAAAACTC+AGG - chr1_1:78392391-78392410 None:intergenic 25.0%
!!! GTCTTCATATACTTTTTTTG+TGG + chr1_1:78392588-78392607 Msa0046330:intron 25.0%
!! TATTATATTTCTGTTCGCAT+TGG + chr1_1:78392626-78392645 Msa0046330:intron 25.0%
!! TCTATTACTGTGACATTTTA+AGG + chr1_1:78393008-78393027 Msa0046330:intron 25.0%
!! TTTGATATAGTGCTTTGAAT+AGG + chr1_1:78393115-78393134 Msa0046330:intron 25.0%
!! AACTTTAAAAAATGCTTGTC+TGG + chr1_1:78393370-78393389 Msa0046330:intron 25.0%
!! AAAGATTTTTCACACTTACT+TGG + chr1_1:78393402-78393421 Msa0046330:intron 25.0%
!! AAGATTTTTCACACTTACTT+GGG + chr1_1:78393403-78393422 Msa0046330:intron 25.0%
! AAAAATGAGGTGAAAAAAAG+TGG + chr1_1:78393512-78393531 Msa0046330:intron 25.0%
! TAATTAAGATTGGATTTACG+TGG + chr1_1:78393760-78393779 Msa0046330:intron 25.0%
! ATCATATAGCTATGTTCAAA+CGG + chr1_1:78393823-78393842 Msa0046330:intron 25.0%
! ACTAGAATTTCTCTTGATAT+AGG + chr1_1:78393881-78393900 Msa0046330:intron 25.0%
! TATAAATTTGCATAAACACG+AGG + chr1_1:78394298-78394317 Msa0046330:intron 25.0%
! CAAACAAACTAAAAGAATAG+GGG - chr1_1:78395142-78395161 None:intergenic 25.0%
! GCAAACAAACTAAAAGAATA+GGG - chr1_1:78395143-78395162 None:intergenic 25.0%
!! TTTCTTCTCTTTGTTTGTAA+AGG + chr1_1:78395236-78395255 Msa0046330:three_prime_UTR 25.0%
!!! ATAATTTTTGGACTGTATGT+CGG + chr1_1:78395282-78395301 Msa0046330:three_prime_UTR 25.0%
!!! GTTTTTTTCTTTTTCTTCCG+GGG - chr1_1:78378690-78378709 None:intergenic 30.0%
TGAGGATAATGTTAAAGATC+AGG + chr1_1:78379047-78379066 Msa0046330:CDS 30.0%
! TGTTGTTATTGCTACTGATT+AGG + chr1_1:78379180-78379199 Msa0046330:intron 30.0%
! GTTGTTATTGCTACTGATTA+GGG + chr1_1:78379181-78379200 Msa0046330:intron 30.0%
ATACATATTCAGCAGAGTAT+CGG - chr1_1:78379339-78379358 None:intergenic 30.0%
! CCATTTTCACAAATGATTAC+TGG - chr1_1:78379435-78379454 None:intergenic 30.0%
CCAGTAATCATTTGTGAAAA+TGG + chr1_1:78379432-78379451 Msa0046330:intron 30.0%
TTGTGAAAATGGCATAATCT+TGG + chr1_1:78379443-78379462 Msa0046330:intron 30.0%
ACAGCAAAACAAACAACATT+TGG - chr1_1:78379654-78379673 None:intergenic 30.0%
TGTTGTATTACGAAATACGA+AGG + chr1_1:78379973-78379992 Msa0046330:intron 30.0%
GTTGTATTACGAAATACGAA+GGG + chr1_1:78379974-78379993 Msa0046330:intron 30.0%
TTTGCAAAAGGCTTATTTCA+TGG - chr1_1:78380057-78380076 None:intergenic 30.0%
CATTATCTTAGGTTTGCAAA+AGG - chr1_1:78380069-78380088 None:intergenic 30.0%
CCTATTGAAATTATAGGGTT+TGG - chr1_1:78380288-78380307 None:intergenic 30.0%
CCAAACCCTATAATTTCAAT+AGG + chr1_1:78380285-78380304 Msa0046330:intron 30.0%
CAATTAGCATTTCATGCATT+TGG - chr1_1:78380378-78380397 None:intergenic 30.0%
AACTATGACATTATGGTTAC+TGG - chr1_1:78380419-78380438 None:intergenic 30.0%
CTAACTCATCCTTAAAAAAC+CGG - chr1_1:78380776-78380795 None:intergenic 30.0%
ATACTATACTCATCCTAACT+AGG + chr1_1:78380867-78380886 Msa0046330:intron 30.0%
TACTATACTCATCCTAACTA+GGG + chr1_1:78380868-78380887 Msa0046330:intron 30.0%
AAAATGGAAAAGAACAAGCA+AGG - chr1_1:78381028-78381047 None:intergenic 30.0%
TAATGTAGCATATGAAAAGG+GGG - chr1_1:78381101-78381120 None:intergenic 30.0%
CTAATGTAGCATATGAAAAG+GGG - chr1_1:78381102-78381121 None:intergenic 30.0%
CCTAATGTAGCATATGAAAA+GGG - chr1_1:78381103-78381122 None:intergenic 30.0%
TTAGGCATGCTCTTAAAATT+TGG + chr1_1:78381118-78381137 Msa0046330:intron 30.0%
ATGCTCTTAAAATTTGGATC+AGG + chr1_1:78381124-78381143 Msa0046330:intron 30.0%
AAAGTAGTTCTCAAAATGCT+TGG - chr1_1:78381197-78381216 None:intergenic 30.0%
! TTAAGAGTTCTTTTGCTTGA+AGG + chr1_1:78381538-78381557 Msa0046330:intron 30.0%
TGAAAGAAAAAGTTCTGCAT+TGG + chr1_1:78381752-78381771 Msa0046330:CDS 30.0%
! CACATTACTTCAGTTTTCTT+CGG + chr1_1:78381918-78381937 Msa0046330:intron 30.0%
!! TATTGGTATTGGTATTTGAC+AGG + chr1_1:78381961-78381980 Msa0046330:intron 30.0%
ACAAAAAATAGTTACCACGT+AGG - chr1_1:78382067-78382086 None:intergenic 30.0%
! TTAAGTGAAGGTTCTGTTTT+TGG + chr1_1:78382400-78382419 Msa0046330:intron 30.0%
TTTCAGCAATAAATAATGCC+TGG - chr1_1:78382618-78382637 None:intergenic 30.0%
GCATTATTTATTGCTGAAAG+TGG + chr1_1:78382619-78382638 Msa0046330:intron 30.0%
!! TTTTGTTTATGGTTTCTCTC+TGG + chr1_1:78382894-78382913 Msa0046330:intron 30.0%
AGAGTTCTATTTCAGTGTTT+GGG + chr1_1:78382941-78382960 Msa0046330:intron 30.0%
ATTTCAGTGTTTGGGAAATT+TGG + chr1_1:78382949-78382968 Msa0046330:intron 30.0%
TTAGTATTTCCTAGATTGGT+TGG + chr1_1:78382991-78383010 Msa0046330:intron 30.0%
TCATATCATCATCAACACTT+GGG - chr1_1:78383086-78383105 None:intergenic 30.0%
TGATGATATGACAGTTTCTT+TGG + chr1_1:78383095-78383114 Msa0046330:intron 30.0%
! CTCAGTACGACTTTTATAAT+CGG - chr1_1:78383242-78383261 None:intergenic 30.0%
ACTTCTGTATGGTTAAACTA+GGG - chr1_1:78383359-78383378 None:intergenic 30.0%
TACTTCTGTATGGTTAAACT+AGG - chr1_1:78383360-78383379 None:intergenic 30.0%
! CAGAAGTAGTCTTTTATTCT+TGG + chr1_1:78383372-78383391 Msa0046330:intron 30.0%
AAATTGTTTGCCTAAATGCA+GGG - chr1_1:78383452-78383471 None:intergenic 30.0%
TAAATTGTTTGCCTAAATGC+AGG - chr1_1:78383453-78383472 None:intergenic 30.0%
! GGCAAACAATTTAAGATCAA+CGG + chr1_1:78383460-78383479 Msa0046330:intron 30.0%
GCTTCACATTAAAATAAAGG+AGG - chr1_1:78383494-78383513 None:intergenic 30.0%
AAAAAATTAGGACTGTCCAA+GGG + chr1_1:78383764-78383783 Msa0046330:CDS 30.0%
AAGATCGAAATGAATACAGT+AGG - chr1_1:78383923-78383942 None:intergenic 30.0%
ATTCATTTCGATCTTTCTGT+AGG + chr1_1:78383928-78383947 Msa0046330:intron 30.0%
ATTAGGGTACATAATGTTTG+TGG + chr1_1:78384077-78384096 Msa0046330:intron 30.0%
! TAATGTTTGTGGATTTTCTC+TGG + chr1_1:78384088-78384107 Msa0046330:intron 30.0%
GTATTTCTTTAGATTCAGGT+AGG + chr1_1:78384167-78384186 Msa0046330:intron 30.0%
TATGTTGTATCTTTGCTTGT+TGG + chr1_1:78384345-78384364 Msa0046330:intron 30.0%
ATGTTGTATCTTTGCTTGTT+GGG + chr1_1:78384346-78384365 Msa0046330:intron 30.0%
! GAAAAGAAAGGCATAAATGA+AGG + chr1_1:78384519-78384538 Msa0046330:intron 30.0%
TTCATGCTAAAACAAAACGA+GGG - chr1_1:78384596-78384615 None:intergenic 30.0%
TTTCATGCTAAAACAAAACG+AGG - chr1_1:78384597-78384616 None:intergenic 30.0%
!! CTATATTCTTGTTGTTTGCA+TGG + chr1_1:78384811-78384830 Msa0046330:intron 30.0%
CTTAAAAACATGACATGCAT+AGG - chr1_1:78385073-78385092 None:intergenic 30.0%
ATTACTGTTAGAGTTGTTTG+AGG + chr1_1:78385115-78385134 Msa0046330:intron 30.0%
TTACTGTTAGAGTTGTTTGA+GGG + chr1_1:78385116-78385135 Msa0046330:intron 30.0%
ACAACTCTAACAGTAAATAG+GGG - chr1_1:78385312-78385331 None:intergenic 30.0%
!! TACCAAAAAGTATCAGAGTA+AGG + chr1_1:78385348-78385367 Msa0046330:intron 30.0%
! TTCCTTACTCTGATACTTTT+TGG - chr1_1:78385353-78385372 None:intergenic 30.0%
GACTGACAATAGTTATAGAA+AGG - chr1_1:78385827-78385846 None:intergenic 30.0%
!! TATATGATGGATGATTACAG+CGG - chr1_1:78385948-78385967 None:intergenic 30.0%
CTATTGGAATTTGAATCTGT+GGG - chr1_1:78386332-78386351 None:intergenic 30.0%
ACTATTGGAATTTGAATCTG+TGG - chr1_1:78386333-78386352 None:intergenic 30.0%
AATATCACTGTATGGAGTTA+AGG + chr1_1:78386439-78386458 Msa0046330:intron 30.0%
TACCGGTGTAAAAATATGTT+TGG + chr1_1:78386486-78386505 Msa0046330:intron 30.0%
ACCGGTGTAAAAATATGTTT+GGG + chr1_1:78386487-78386506 Msa0046330:intron 30.0%
!! ACCCAAACATATTTTTACAC+CGG - chr1_1:78386491-78386510 None:intergenic 30.0%
!!! TATTTTTCAGGGAGAAAAAG+TGG + chr1_1:78386641-78386660 Msa0046330:intron 30.0%
!!! ATTTTTCAGGGAGAAAAAGT+GGG + chr1_1:78386642-78386661 Msa0046330:intron 30.0%
GCAATGTCGGAAAAATATAT+TGG - chr1_1:78386724-78386743 None:intergenic 30.0%
CTATAAATAGACTGCAATGT+CGG - chr1_1:78386737-78386756 None:intergenic 30.0%
TCTATTTATAGTGATCACCA+TGG + chr1_1:78386746-78386765 Msa0046330:intron 30.0%
! ATATTTTGTCCCCAAAACTA+TGG + chr1_1:78386849-78386868 Msa0046330:intron 30.0%
!!! CGTGGTTTTAGTTATTCAAA+AGG + chr1_1:78386940-78386959 Msa0046330:intron 30.0%
! AGCCTATTTTCATAAACTCA+AGG + chr1_1:78387291-78387310 Msa0046330:intron 30.0%
GACCTTGAGTTTATGAAAAT+AGG - chr1_1:78387296-78387315 None:intergenic 30.0%
GCAATGTATTCAAAACCAAT+AGG - chr1_1:78387468-78387487 None:intergenic 30.0%
CTTTCCTAAATTACTCGATT+AGG - chr1_1:78387503-78387522 None:intergenic 30.0%
!!! GGAAAGTATTTTTTGCAACA+TGG + chr1_1:78387517-78387536 Msa0046330:intron 30.0%
!! GACAAATAGAAAGTACTTCA+TGG + chr1_1:78387547-78387566 Msa0046330:intron 30.0%
ATGTTAGTAACCTGCAAAAA+TGG - chr1_1:78387599-78387618 None:intergenic 30.0%
! TGGAGCATTAACATATTAAG+AGG - chr1_1:78388144-78388163 None:intergenic 30.0%
GTTATTACAGTTTGTACTTG+GGG + chr1_1:78388183-78388202 Msa0046330:intron 30.0%
TTGTGAATAACCTAAGTTTG+AGG - chr1_1:78388237-78388256 None:intergenic 30.0%
TGTTTCACATGATGACATTT+AGG + chr1_1:78388370-78388389 Msa0046330:intron 30.0%
TTTAGTCAACTTAAACAGAG+GGG - chr1_1:78388421-78388440 None:intergenic 30.0%
GATTTAGTCAACTTAAACAG+AGG - chr1_1:78388423-78388442 None:intergenic 30.0%
TGACTAAATCATGAAGAATC+CGG + chr1_1:78388433-78388452 Msa0046330:intron 30.0%
!! GGATATAAAATCATTTTGGC+AGG - chr1_1:78388522-78388541 None:intergenic 30.0%
! CCAGGGATATAAAATCATTT+TGG - chr1_1:78388526-78388545 None:intergenic 30.0%
! CCAAAATGATTTTATATCCC+TGG + chr1_1:78388523-78388542 Msa0046330:intron 30.0%
! AGTTAGAAATGTTAGTTTCC+GGG - chr1_1:78388633-78388652 None:intergenic 30.0%
CTGCCAAATATTTACTGAAA+AGG - chr1_1:78388782-78388801 None:intergenic 30.0%
!! ATTTTAACAATGATCCCTTC+AGG + chr1_1:78389022-78389041 Msa0046330:intron 30.0%
! TGCATTTTTAAACTGTTTCC+TGG + chr1_1:78389128-78389147 Msa0046330:CDS 30.0%
! AGTTACAAAATTGGCTTCTT+CGG + chr1_1:78389277-78389296 Msa0046330:intron 30.0%
ACAATCAATAACTGTTGATG+GGG - chr1_1:78389445-78389464 None:intergenic 30.0%
GTACAATCAATAACTGTTGA+TGG - chr1_1:78389447-78389466 None:intergenic 30.0%
TTATTCAGGTGGCTTAATAA+TGG + chr1_1:78389846-78389865 Msa0046330:intron 30.0%
TATTCAGGTGGCTTAATAAT+GGG + chr1_1:78389847-78389866 Msa0046330:intron 30.0%
! CTGTCTTAGAATTTAGGTTT+CGG + chr1_1:78389901-78389920 Msa0046330:intron 30.0%
!!! AGCTATTTTAGAGTTGAGTT+AGG - chr1_1:78389927-78389946 None:intergenic 30.0%
!! CTCAACTCTAAAATAGCTAA+TGG + chr1_1:78389929-78389948 Msa0046330:intron 30.0%
! AAATAGTGGTAAAAAGTGTG+AGG - chr1_1:78389965-78389984 None:intergenic 30.0%
!! ACACTTTTTACCACTATTTC+AGG + chr1_1:78389966-78389985 Msa0046330:intron 30.0%
TTAAATAGTGCGTTATGAGT+GGG - chr1_1:78390185-78390204 None:intergenic 30.0%
! AATTTGGGAAGATCTGAAAT+TGG - chr1_1:78390296-78390315 None:intergenic 30.0%
AGATCTTCCCAAATTCAAAT+TGG + chr1_1:78390301-78390320 Msa0046330:intron 30.0%
TCTAGTGCCAATTTGAATTT+GGG - chr1_1:78390311-78390330 None:intergenic 30.0%
TTCTAGTGCCAATTTGAATT+TGG - chr1_1:78390312-78390331 None:intergenic 30.0%
AATAGTGATATGTCCTATGT+AGG + chr1_1:78390521-78390540 Msa0046330:intron 30.0%
ATAGTGATATGTCCTATGTA+GGG + chr1_1:78390522-78390541 Msa0046330:intron 30.0%
! TGCTGAGTCTTTTGTATATT+TGG + chr1_1:78390617-78390636 Msa0046330:intron 30.0%
! GCTGAGTCTTTTGTATATTT+GGG + chr1_1:78390618-78390637 Msa0046330:intron 30.0%
TACTAGAACATTCTGATTCT+TGG + chr1_1:78390806-78390825 Msa0046330:intron 30.0%
ACTAGAACATTCTGATTCTT+GGG + chr1_1:78390807-78390826 Msa0046330:intron 30.0%
!! GATCTTGTAATTTGTTTCTC+AGG + chr1_1:78390875-78390894 Msa0046330:CDS 30.0%
!! TTGTTCCCATACTTTTAACT+GGG + chr1_1:78390953-78390972 Msa0046330:intron 30.0%
! TCTTTCCCAGTTAAAAGTAT+GGG - chr1_1:78390961-78390980 None:intergenic 30.0%
TTCTTTCCCAGTTAAAAGTA+TGG - chr1_1:78390962-78390981 None:intergenic 30.0%
TAGTTAACAATTCTCATGAC+CGG + chr1_1:78391098-78391117 Msa0046330:intron 30.0%
CTGATTGTTTGTCTATATAC+CGG - chr1_1:78391120-78391139 None:intergenic 30.0%
!! TGTAAGGTTTTGTATAGTGA+TGG + chr1_1:78391207-78391226 Msa0046330:intron 30.0%
AAGCTTCTCTGATACATATT+AGG + chr1_1:78391241-78391260 Msa0046330:intron 30.0%
!!! CCTTACAATTTGGTTTTGTA+AGG - chr1_1:78391290-78391309 None:intergenic 30.0%
CCTTACAAAACCAAATTGTA+AGG + chr1_1:78391287-78391306 Msa0046330:intron 30.0%
AAAACCAAATTGTAAGGTGA+GGG + chr1_1:78391293-78391312 Msa0046330:intron 30.0%
TCCAACATAGAAAAGAGATA+AGG - chr1_1:78391345-78391364 None:intergenic 30.0%
AAATAGTTTATGGAGACTAC+TGG - chr1_1:78391380-78391399 None:intergenic 30.0%
CAGTTTATTATGAAGCAGAA+AGG + chr1_1:78391436-78391455 Msa0046330:intron 30.0%
TCAATACATTGACACTATCT+TGG + chr1_1:78391531-78391550 Msa0046330:intron 30.0%
AATTATTACCTCTGCATGAA+CGG - chr1_1:78391823-78391842 None:intergenic 30.0%
GGTAATAATTGCATGTGATA+AGG + chr1_1:78391833-78391852 Msa0046330:intron 30.0%
! TAATCGGATGTTTCTGTTAA+AGG + chr1_1:78392053-78392072 Msa0046330:intron 30.0%
GACCTGTGAAAATACTAAAA+AGG + chr1_1:78392342-78392361 Msa0046330:intron 30.0%
AAATCAAATAAAACTCAGGC+GGG - chr1_1:78392387-78392406 None:intergenic 30.0%
TGTAACTAGAAGAAAGTTTC+TGG - chr1_1:78392411-78392430 None:intergenic 30.0%
CCACTAATCTATTTCAAACT+AGG - chr1_1:78392466-78392485 None:intergenic 30.0%
! CCTAGTTTGAAATAGATTAG+TGG + chr1_1:78392463-78392482 Msa0046330:intron 30.0%
!! TGTCAAATGGATTTTGAAGA+AGG + chr1_1:78392539-78392558 Msa0046330:intron 30.0%
TCAAAATCAAAACAACACTC+GGG - chr1_1:78392689-78392708 None:intergenic 30.0%
CTCAAAATCAAAACAACACT+CGG - chr1_1:78392690-78392709 None:intergenic 30.0%
TTAAAGAGCTAAGTTTAGCA+AGG - chr1_1:78392733-78392752 None:intergenic 30.0%
AAAATGTAAACGGCTTCATA+TGG - chr1_1:78393054-78393073 None:intergenic 30.0%
TTTCACAGAACGCATAAATT+TGG - chr1_1:78393171-78393190 None:intergenic 30.0%
! AGATTTTTCACACTTACTTG+GGG + chr1_1:78393404-78393423 Msa0046330:intron 30.0%
GATATGTGATGTATTGAGAA+AGG + chr1_1:78393478-78393497 Msa0046330:intron 30.0%
TATTAATTCTTCTGCAACAC+TGG + chr1_1:78393557-78393576 Msa0046330:intron 30.0%
! TGTGCTAGTCTAATTAAGAT+TGG + chr1_1:78393750-78393769 Msa0046330:intron 30.0%
GATTTACGTGGAATATGATT+GGG + chr1_1:78393772-78393791 Msa0046330:intron 30.0%
AGAATTTCTCTTGATATAGG+AGG + chr1_1:78393884-78393903 Msa0046330:intron 30.0%
GCAATGTTGTAAAATTACAG+TGG - chr1_1:78393921-78393940 None:intergenic 30.0%
AACAAAACAAACGTGTAAAG+TGG - chr1_1:78393967-78393986 None:intergenic 30.0%
TGTATATATAGAGGATAGGT+TGG + chr1_1:78394119-78394138 Msa0046330:intron 30.0%
GTATATATAGAGGATAGGTT+GGG + chr1_1:78394120-78394139 Msa0046330:intron 30.0%
CTAAATAATTCCACATCTCT+GGG - chr1_1:78394245-78394264 None:intergenic 30.0%
!! ACGTTTAGTTTGACATGTTT+CGG + chr1_1:78394755-78394774 Msa0046330:intron 30.0%
GGCAAACAAACTAAAAGAAT+AGG - chr1_1:78395144-78395163 None:intergenic 30.0%
!! TTTTGTCATTCGGGTTTTAA+AGG + chr1_1:78395343-78395362 Msa0046330:three_prime_UTR 30.0%
!!! TTTGTCATTCGGGTTTTAAA+GGG + chr1_1:78395344-78395363 Msa0046330:three_prime_UTR 30.0%
GAGGAAGAAAGAATGTTCAA+TGG - chr1_1:78378668-78378687 None:intergenic 35.0%
AATACTAAGCATCTCCACTT+CGG - chr1_1:78379016-78379035 None:intergenic 35.0%
!! GAGATGCTTAGTATTTCTAG+CGG + chr1_1:78379021-78379040 Msa0046330:CDS 35.0%
! AAATGGCATAATCTTGGTGT+CGG + chr1_1:78379449-78379468 Msa0046330:intron 35.0%
GCACAGATACTTCTAATCAA+AGG - chr1_1:78379588-78379607 None:intergenic 35.0%
!! TGCTGTGAATTTTGATCGAT+TGG + chr1_1:78379668-78379687 Msa0046330:intron 35.0%
! CTCATTGGTTGTGCATTATT+CGG + chr1_1:78379751-78379770 Msa0046330:intron 35.0%
! TCATTGGTTGTGCATTATTC+GGG + chr1_1:78379752-78379771 Msa0046330:intron 35.0%
! TCATTTGTTGAAGAGTAACG+AGG - chr1_1:78379794-78379813 None:intergenic 35.0%
!!! TTAGGAAGTTTTAGCTTGAG+AGG + chr1_1:78379823-78379842 Msa0046330:intron 35.0%
TATTACGAAATACGAAGGGA+AGG + chr1_1:78379978-78379997 Msa0046330:intron 35.0%
AAATTGTTACGATGTGACCA+TGG + chr1_1:78380017-78380036 Msa0046330:intron 35.0%
GTTCATGGCAACATTATCTT+AGG - chr1_1:78380080-78380099 None:intergenic 35.0%
! TTGTACTGATAACAATCCTG+TGG + chr1_1:78380650-78380669 Msa0046330:intron 35.0%
! TGTACTGATAACAATCCTGT+GGG + chr1_1:78380651-78380670 Msa0046330:intron 35.0%
ACTCTTTAACAGTACTCAAC+AGG - chr1_1:78380688-78380707 None:intergenic 35.0%
ACTGTTAAAGAGTCCCATAT+TGG + chr1_1:78380695-78380714 Msa0046330:intron 35.0%
GTTAGGATGAGTATAGTATC+AGG - chr1_1:78380866-78380885 None:intergenic 35.0%
GGTAATATTTCACCCTAGTT+AGG - chr1_1:78380883-78380902 None:intergenic 35.0%
! ACAGCCTTGTAGAACTTATT+AGG - chr1_1:78380904-78380923 None:intergenic 35.0%
AAGCAAGGACAAGAAGAAAA+AGG - chr1_1:78381013-78381032 None:intergenic 35.0%
! CCCTTTTCATATGCTACATT+AGG + chr1_1:78381100-78381119 Msa0046330:intron 35.0%
GCCTAATGTAGCATATGAAA+AGG - chr1_1:78381104-78381123 None:intergenic 35.0%
AAGTACTCCTTATCCTTACA+TGG - chr1_1:78381442-78381461 None:intergenic 35.0%
!! GCTATAAATTTTTGAGCCAC+AGG - chr1_1:78381723-78381742 None:intergenic 35.0%
!! AAGTTCTGCATTGGCTAAAA+AGG + chr1_1:78381761-78381780 Msa0046330:CDS 35.0%
!! AGTTCTGCATTGGCTAAAAA+GGG + chr1_1:78381762-78381781 Msa0046330:CDS 35.0%
CGAAGAAAACTGAAGTAATG+TGG - chr1_1:78381920-78381939 None:intergenic 35.0%
! ATTACTTCAGTTTTCTTCGG+AGG + chr1_1:78381921-78381940 Msa0046330:intron 35.0%
! TTACTTCAGTTTTCTTCGGA+GGG + chr1_1:78381922-78381941 Msa0046330:intron 35.0%
GATTAATCCTGGTGGTTTAT+TGG + chr1_1:78381944-78381963 Msa0046330:intron 35.0%
AGTCAACTATGACAGATATG+AGG + chr1_1:78382322-78382341 Msa0046330:intron 35.0%
!! TTTTGGAAGGTTAACTGTAC+CGG + chr1_1:78382417-78382436 Msa0046330:intron 35.0%
! GCGAAAAGTTTATTGGTAAC+TGG + chr1_1:78382470-78382489 Msa0046330:intron 35.0%
AGTTCAAAAGACGAAGATAG+TGG + chr1_1:78382552-78382571 Msa0046330:intron 35.0%
! TAAGAGTATAGGTCTGAACT+TGG + chr1_1:78382708-78382727 Msa0046330:intron 35.0%
! AAGAGTATAGGTCTGAACTT+GGG + chr1_1:78382709-78382728 Msa0046330:intron 35.0%
! CTTTTGCACACGTTTATTGT+AGG - chr1_1:78382776-78382795 None:intergenic 35.0%
CCTTAATTTATCCCAGATGT+AGG - chr1_1:78382799-78382818 None:intergenic 35.0%
! CCTACATCTGGGATAAATTA+AGG + chr1_1:78382796-78382815 Msa0046330:intron 35.0%
! TCTGGGATAAATTAAGGAAG+TGG + chr1_1:78382802-78382821 Msa0046330:intron 35.0%
GAGAGTTCTATTTCAGTGTT+TGG + chr1_1:78382940-78382959 Msa0046330:intron 35.0%
!! ACTTGTTTTCCAACCAATCT+AGG - chr1_1:78383003-78383022 None:intergenic 35.0%
GTCATATCATCATCAACACT+TGG - chr1_1:78383087-78383106 None:intergenic 35.0%
TCTTGTAAAACCACAATCGA+CGG + chr1_1:78383304-78383323 Msa0046330:CDS 35.0%
!!! CATTAGTTTTCCCTGCATTT+AGG + chr1_1:78383439-78383458 Msa0046330:intron 35.0%
GTCAAAGTTAAGACGAATTG+AGG + chr1_1:78383541-78383560 Msa0046330:CDS 35.0%
AGGCTCAAGCAGAAAAAATT+AGG + chr1_1:78383752-78383771 Msa0046330:intron 35.0%
GAAAAAATTAGGACTGTCCA+AGG + chr1_1:78383763-78383782 Msa0046330:CDS 35.0%
! TTGGTAGGTTGAAAAGTGTA+CGG - chr1_1:78383804-78383823 None:intergenic 35.0%
TAGCAAGGGTGAATATGATT+TGG + chr1_1:78383843-78383862 Msa0046330:CDS 35.0%
! TGAATATGATTTGGCTGTCA+GGG + chr1_1:78383852-78383871 Msa0046330:CDS 35.0%
CAGTAGGTTTATACATGAGA+GGG - chr1_1:78383907-78383926 None:intergenic 35.0%
ACAGTAGGTTTATACATGAG+AGG - chr1_1:78383908-78383927 None:intergenic 35.0%
AAGCATGTGACAGAGTAAAT+TGG - chr1_1:78384122-78384141 None:intergenic 35.0%
! GTCTATGCTTTTCATGTCTA+TGG + chr1_1:78384241-78384260 Msa0046330:CDS 35.0%
!! CTTAAGTTTGCTAGTCATGT+TGG + chr1_1:78384305-78384324 Msa0046330:intron 35.0%
!! GTTTGATGGGTTGAAAAGAA+AGG + chr1_1:78384507-78384526 Msa0046330:intron 35.0%
ATAAATGAAGGGAAGTGATG+TGG + chr1_1:78384531-78384550 Msa0046330:intron 35.0%
TCATGCTAAAACAAAACGAG+GGG - chr1_1:78384595-78384614 None:intergenic 35.0%
GTTCATTGAAGTAGATGATC+TGG + chr1_1:78384625-78384644 Msa0046330:intron 35.0%
AAGATTTATTGCAGTGGTCT+TGG + chr1_1:78384912-78384931 Msa0046330:intron 35.0%
GAATACAGTGAGGTTATTGT+TGG + chr1_1:78384990-78385009 Msa0046330:CDS 35.0%
AGTGAGGTTATTGTTGGATT+TGG + chr1_1:78384996-78385015 Msa0046330:CDS 35.0%
TACTGTTAGAGTTGTTTGAG+GGG + chr1_1:78385117-78385136 Msa0046330:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr1_1:78385158-78385177 Msa0046330:intron 35.0%
AACAGCCTCTTGTGTAAAAA+CGG + chr1_1:78385205-78385224 Msa0046330:intron 35.0%
CAACTCTAACAGTAAATAGG+GGG - chr1_1:78385311-78385330 None:intergenic 35.0%
!! CTGTTAGAGTTATTTGCTGT+TGG + chr1_1:78385387-78385406 Msa0046330:intron 35.0%
! ATGGTTCTTGGTCTTTACAA+AGG - chr1_1:78385425-78385444 None:intergenic 35.0%
GTACAAATCAACATGGTTCT+TGG - chr1_1:78385437-78385456 None:intergenic 35.0%
! GAAGAAGGTACAAATCAACA+TGG - chr1_1:78385444-78385463 None:intergenic 35.0%
!!! AGTGGTTTTTTTGCATTCCA+TGG + chr1_1:78385560-78385579 Msa0046330:intron 35.0%
!!! GTGGTTTTTTTGCATTCCAT+GGG + chr1_1:78385561-78385580 Msa0046330:intron 35.0%
! GTTACGCAAATTTTCCATTC+TGG - chr1_1:78385679-78385698 None:intergenic 35.0%
TTAGATCTACTGAATGAGAC+TGG - chr1_1:78385877-78385896 None:intergenic 35.0%
TCTCATTCAGTAGATCTAAC+TGG + chr1_1:78385878-78385897 Msa0046330:CDS 35.0%
AGCAAACTTTCCACTGAAAA+CGG - chr1_1:78385996-78386015 None:intergenic 35.0%
!! TTTCAGTGGAAAGTTTGCTA+AGG + chr1_1:78385997-78386016 Msa0046330:CDS 35.0%
TTGACTCAATTGGATTCTTC+TGG + chr1_1:78386166-78386185 Msa0046330:intron 35.0%
TATTGTGCTGCATATCATTG+CGG - chr1_1:78386423-78386442 None:intergenic 35.0%
!!! GTTTACATGCCCTTTTTTAC+CGG + chr1_1:78386469-78386488 Msa0046330:intron 35.0%
! GCATACTTTTAGTCCCTTTA+TGG + chr1_1:78386598-78386617 Msa0046330:intron 35.0%
! ACACACAAGACCATAGTTTT+GGG - chr1_1:78386862-78386881 None:intergenic 35.0%
!! GACTAAAAGCGCACTATTTT+TGG + chr1_1:78386962-78386981 Msa0046330:intron 35.0%
CGAAATTCAACAAACAATGC+TGG - chr1_1:78387019-78387038 None:intergenic 35.0%
GTCACTCCTAGTTGTTATAT+TGG + chr1_1:78387267-78387286 Msa0046330:intron 35.0%
AGGCTTCCAATATAACAACT+AGG - chr1_1:78387276-78387295 None:intergenic 35.0%
GATTTGGCATATACCATGTA+GGG - chr1_1:78387327-78387346 None:intergenic 35.0%
! GGTTTTCTCCTTTTTCCTAT+TGG + chr1_1:78387450-78387469 Msa0046330:intron 35.0%
TGCAAAAATGGCAGATTATC+AGG - chr1_1:78387587-78387606 None:intergenic 35.0%
!!! TGATAATCTGCCATTTTTGC+AGG + chr1_1:78387586-78387605 Msa0046330:intron 35.0%
AGATAATTGATACCTGCAAC+CGG - chr1_1:78387728-78387747 None:intergenic 35.0%
CATTGCAACCAGAGATTATA+AGG + chr1_1:78387824-78387843 Msa0046330:CDS 35.0%
ATGTTAATGCTCCATATGTC+TGG + chr1_1:78388150-78388169 Msa0046330:intron 35.0%
CTAGTTAATGACCAGACATA+TGG - chr1_1:78388164-78388183 None:intergenic 35.0%
! AATTTTGGGCAGAAGAATCT+TGG + chr1_1:78388255-78388274 Msa0046330:intron 35.0%
! TTTCTAAAAGCCGAGTCTTT+AGG + chr1_1:78388311-78388330 Msa0046330:intron 35.0%
CTTGAAACATGAACATTCAC+AGG + chr1_1:78388393-78388412 Msa0046330:intron 35.0%
TTAGTCAACTTAAACAGAGG+GGG - chr1_1:78388420-78388439 None:intergenic 35.0%
GACTAAATCATGAAGAATCC+GGG + chr1_1:78388434-78388453 Msa0046330:intron 35.0%
!! AACTCCCAATTACTTTTGCA+TGG + chr1_1:78388469-78388488 Msa0046330:intron 35.0%
ACCTCCATGCAAAAGTAATT+GGG - chr1_1:78388476-78388495 None:intergenic 35.0%
AACCTCCATGCAAAAGTAAT+TGG - chr1_1:78388477-78388496 None:intergenic 35.0%
!! TTACTTTTGCATGGAGGTTT+TGG + chr1_1:78388478-78388497 Msa0046330:intron 35.0%
!! ATAAAATCATTTTGGCAGGG+TGG - chr1_1:78388518-78388537 None:intergenic 35.0%
GAAACACATTAGGAGTTCAA+AGG + chr1_1:78388587-78388606 Msa0046330:intron 35.0%
! GTTAGAAATGTTAGTTTCCG+GGG - chr1_1:78388632-78388651 None:intergenic 35.0%
! TTGGCATCAAGTTATTTCCT+TGG - chr1_1:78388710-78388729 None:intergenic 35.0%
ATCACAGCAAAGATAGTGTA+GGG - chr1_1:78388859-78388878 None:intergenic 35.0%
GTAAACATCACACTGACATA+CGG - chr1_1:78388895-78388914 None:intergenic 35.0%
ATACCAAGACAAGTGTATTG+CGG - chr1_1:78388974-78388993 None:intergenic 35.0%
! TCAGGTAATTTAGAGCGTAT+TGG + chr1_1:78389307-78389326 Msa0046330:intron 35.0%
AGCGTATTGGAATTGAACTT+GGG + chr1_1:78389320-78389339 Msa0046330:CDS 35.0%
TGTATACCCATTAGGGAAAT+GGG - chr1_1:78389371-78389390 None:intergenic 35.0%
CTTCAAGTGTATACCCATTA+GGG - chr1_1:78389378-78389397 None:intergenic 35.0%
ATGACAAATACCGACATATC+TGG + chr1_1:78389512-78389531 Msa0046330:CDS 35.0%
ACACAGATATACCCTTACAA+TGG - chr1_1:78389598-78389617 None:intergenic 35.0%
TAGTCATATGGCATGAAAAG+TGG - chr1_1:78389771-78389790 None:intergenic 35.0%
GCCATATCACTATTCAATGT+GGG + chr1_1:78389988-78390007 Msa0046330:intron 35.0%
TCCCACATTGAATAGTGATA+TGG - chr1_1:78389992-78390011 None:intergenic 35.0%
CTTAAATAGTGCGTTATGAG+TGG - chr1_1:78390186-78390205 None:intergenic 35.0%
ACACCTATCATCAAAGGATT+TGG + chr1_1:78390235-78390254 Msa0046330:intron 35.0%
! CAACCAAATCCTTTGATGAT+AGG - chr1_1:78390241-78390260 None:intergenic 35.0%
TCTATAGCTTGGACAAATGT+GGG - chr1_1:78390378-78390397 None:intergenic 35.0%
ATCTATAGCTTGGACAAATG+TGG - chr1_1:78390379-78390398 None:intergenic 35.0%
TCACTATTCACTAGTAGATG+TGG - chr1_1:78390509-78390528 None:intergenic 35.0%
! AAGTCTTATAAGCCCTACAT+AGG - chr1_1:78390537-78390556 None:intergenic 35.0%
TATGTAGGGCTTATAAGACT+TGG + chr1_1:78390536-78390555 Msa0046330:intron 35.0%
ATGTAGGGCTTATAAGACTT+GGG + chr1_1:78390537-78390556 Msa0046330:intron 35.0%
!!! TATTTTGAAGTCAGGCACAT+AGG - chr1_1:78390756-78390775 None:intergenic 35.0%
TTCTTGGGAACCTTTAATTC+AGG + chr1_1:78390822-78390841 Msa0046330:intron 35.0%
TCTTGGGAACCTTTAATTCA+GGG + chr1_1:78390823-78390842 Msa0046330:intron 35.0%
! GTTGTTCCCATACTTTTAAC+TGG + chr1_1:78390952-78390971 Msa0046330:intron 35.0%
TGTAGAATAATGCAACACCT+TGG - chr1_1:78391179-78391198 None:intergenic 35.0%
CAAAACCAAATTGTAAGGTG+AGG + chr1_1:78391292-78391311 Msa0046330:intron 35.0%
AAACCAAATTGTAAGGTGAG+GGG + chr1_1:78391294-78391313 Msa0046330:intron 35.0%
CCTTGAATGAGTTTATAGAG+TGG - chr1_1:78391322-78391341 None:intergenic 35.0%
CCACTCTATAAACTCATTCA+AGG + chr1_1:78391319-78391338 Msa0046330:intron 35.0%
! GCCTTATCTCTTTTCTATGT+TGG + chr1_1:78391341-78391360 Msa0046330:intron 35.0%
! TCTCTTTTCTATGTTGGACT+TGG + chr1_1:78391347-78391366 Msa0046330:intron 35.0%
TTATGAAGCAGAAAGGACAA+TGG + chr1_1:78391443-78391462 Msa0046330:intron 35.0%
ACGAGTTATCTGTTGAATTC+TGG + chr1_1:78391589-78391608 Msa0046330:CDS 35.0%
TGTTGAATTCTGGCATTCAA+TGG + chr1_1:78391599-78391618 Msa0046330:CDS 35.0%
GTTGAATTCTGGCATTCAAT+GGG + chr1_1:78391600-78391619 Msa0046330:CDS 35.0%
TTGAATTCTGGCATTCAATG+GGG + chr1_1:78391601-78391620 Msa0046330:CDS 35.0%
AATGTTACAAAACCTAGCGA+AGG + chr1_1:78391929-78391948 Msa0046330:intron 35.0%
! TTGATACGCCAGTATTTTCA+TGG - chr1_1:78392021-78392040 None:intergenic 35.0%
TTCATAGGATGCTTGTCTTT+CGG - chr1_1:78392107-78392126 None:intergenic 35.0%
TATGAAGCACATATGCTCTT+CGG + chr1_1:78392121-78392140 Msa0046330:intron 35.0%
TCAGTGTAATTATATGCGTC+TGG - chr1_1:78392199-78392218 None:intergenic 35.0%
! CCAGAGTAAGAAGCATAATA+AGG - chr1_1:78392318-78392337 None:intergenic 35.0%
CCTTATTATGCTTCTTACTC+TGG + chr1_1:78392315-78392334 Msa0046330:intron 35.0%
!! TAGGAGCATGTTTTTCTACA+CGG - chr1_1:78392447-78392466 None:intergenic 35.0%
AATCCATTTGACATATTCCG+AGG - chr1_1:78392532-78392551 None:intergenic 35.0%
CACTCAGATTTCTGCATATA+TGG - chr1_1:78392660-78392679 None:intergenic 35.0%
AAGTACAGATCTTAGATCAC+TGG + chr1_1:78392947-78392966 Msa0046330:CDS 35.0%
CTTAGATCACTGGATACAAA+TGG + chr1_1:78392957-78392976 Msa0046330:CDS 35.0%
TTGTCAAGTGACAAACAACA+CGG - chr1_1:78393269-78393288 None:intergenic 35.0%
GAGAAAGAACAGTGAGAAAA+GGG - chr1_1:78393299-78393318 None:intergenic 35.0%
TGAGAAAGAACAGTGAGAAA+AGG - chr1_1:78393300-78393319 None:intergenic 35.0%
CTTTCTCAGTAATCCAAAGT+AGG + chr1_1:78393312-78393331 Msa0046330:intron 35.0%
TAGAAGTTGCATTCCTACTT+TGG - chr1_1:78393328-78393347 None:intergenic 35.0%
AAAAATGCTTGTCTGGACAA+AGG + chr1_1:78393377-78393396 Msa0046330:intron 35.0%
ATAGTATTTCCTCCCTAATG+GGG - chr1_1:78393439-78393458 None:intergenic 35.0%
CATAGTATTTCCTCCCTAAT+GGG - chr1_1:78393440-78393459 None:intergenic 35.0%
GGAAGAGATAGAGAAAAATG+AGG + chr1_1:78393499-78393518 Msa0046330:intron 35.0%
ATGAGGTGAAAAAAAGTGGA+AGG + chr1_1:78393516-78393535 Msa0046330:intron 35.0%
TGAGGTGAAAAAAAGTGGAA+GGG + chr1_1:78393517-78393536 Msa0046330:intron 35.0%
TCTAATCTTTCAACTGTGAC+TGG - chr1_1:78393589-78393608 None:intergenic 35.0%
ACCCAACTCTTAAGTTTGAT+TGG + chr1_1:78393688-78393707 Msa0046330:intron 35.0%
CCCAATCAAACTTAAGAGTT+GGG - chr1_1:78393692-78393711 None:intergenic 35.0%
CCCAACTCTTAAGTTTGATT+GGG + chr1_1:78393689-78393708 Msa0046330:intron 35.0%
GGATTTACGTGGAATATGAT+TGG + chr1_1:78393771-78393790 Msa0046330:intron 35.0%
! ATCTAGCTAACGAAGCATTT+GGG - chr1_1:78394150-78394169 None:intergenic 35.0%
! TATCTAGCTAACGAAGCATT+TGG - chr1_1:78394151-78394170 None:intergenic 35.0%
CCTAAATAATTCCACATCTC+TGG - chr1_1:78394246-78394265 None:intergenic 35.0%
CCAGAGATGTGGAATTATTT+AGG + chr1_1:78394243-78394262 Msa0046330:intron 35.0%
AAATCTAATGCTGCAGGTAA+AGG - chr1_1:78394349-78394368 None:intergenic 35.0%
GAGATAAAATCTAATGCTGC+AGG - chr1_1:78394355-78394374 None:intergenic 35.0%
TTGCATCGGATGTGAAATAT+GGG - chr1_1:78394432-78394451 None:intergenic 35.0%
GATTCCTTGAAGTCTTTACA+AGG + chr1_1:78394454-78394473 Msa0046330:CDS 35.0%
TAGTCCTTGTAAAGACTTCA+AGG - chr1_1:78394461-78394480 None:intergenic 35.0%
! GTCTTTACAAGGACTACTTT+TGG + chr1_1:78394465-78394484 Msa0046330:CDS 35.0%
TTGCTTACAATTAACTCGTC+TGG - chr1_1:78394604-78394623 None:intergenic 35.0%
TGTTTCGGTATCGTGAAAAA+TGG + chr1_1:78394770-78394789 Msa0046330:intron 35.0%
ACAGTAGTAAATTTAGCAGC+AGG - chr1_1:78394853-78394872 None:intergenic 35.0%
GAATCCATTGAGTTCTTGTA+GGG - chr1_1:78395033-78395052 None:intergenic 35.0%
AGAATCCATTGAGTTCTTGT+AGG - chr1_1:78395034-78395053 None:intergenic 35.0%
AGTATTATATGTACCTCTGG+AGG - chr1_1:78395070-78395089 None:intergenic 35.0%
! TCCAGAGGTACATATAATAC+TGG + chr1_1:78395069-78395088 Msa0046330:CDS 35.0%
TCCAGTATTATATGTACCTC+TGG - chr1_1:78395073-78395092 None:intergenic 35.0%
! CTGGATCCTCAAATTTTTCA+CGG + chr1_1:78395088-78395107 Msa0046330:CDS 35.0%
TCTATGCCGTGAAAAATTTG+AGG - chr1_1:78395097-78395116 None:intergenic 35.0%
! CTTCTCTTTGTTTGTAAAGG+TGG + chr1_1:78395239-78395258 Msa0046330:three_prime_UTR 35.0%
!!! TTGTCATTCGGGTTTTAAAG+GGG + chr1_1:78395345-78395364 Msa0046330:three_prime_UTR 35.0%
! TTTTTCTTTTTCTTCCGGGG+AGG - chr1_1:78378687-78378706 None:intergenic 40.0%
TCACAACGAGATCTCAACTA+CGG + chr1_1:78378856-78378875 Msa0046330:CDS 40.0%
!! TAGTATTTCTAGCGGTGATG+AGG + chr1_1:78379029-78379048 Msa0046330:CDS 40.0%
TTACATCGTCGAAGAATCGA+GGG + chr1_1:78379070-78379089 Msa0046330:CDS 40.0%
TGTAGATGTATCAGACGTGT+CGG - chr1_1:78379487-78379506 None:intergenic 40.0%
CGAATAATGCACAACCAATG+AGG - chr1_1:78379753-78379772 None:intergenic 40.0%
TGAAGAGTAACGAGGAAACT+CGG - chr1_1:78379786-78379805 None:intergenic 40.0%
! AAGTCTGGAAGCATGTCTAA+AGG - chr1_1:78379901-78379920 None:intergenic 40.0%
! TTATAGGGTTTGGGTTTGCA+TGG - chr1_1:78380278-78380297 None:intergenic 40.0%
TAGGACGTAATGCTATGTTC+TGG + chr1_1:78380304-78380323 Msa0046330:intron 40.0%
! CAGGTTTTTCTTTTTCCCAC+AGG - chr1_1:78380669-78380688 None:intergenic 40.0%
CTGAACAAGTGTTTCCTAGT+GGG + chr1_1:78380730-78380749 Msa0046330:intron 40.0%
TGAACAAGTGTTTCCTAGTG+GGG + chr1_1:78380731-78380750 Msa0046330:intron 40.0%
TTAGTCAGCCCAAGTTCATT+GGG - chr1_1:78380826-78380845 None:intergenic 40.0%
ATTAGTCAGCCCAAGTTCAT+TGG - chr1_1:78380827-78380846 None:intergenic 40.0%
TACTACGACTCTTGGAATCT+AGG + chr1_1:78381054-78381073 Msa0046330:intron 40.0%
TTGGGGTTAAGAGTTGAGAT+AGG - chr1_1:78381150-78381169 None:intergenic 40.0%
! ATTTGGAGCATGGACAAATG+CGG + chr1_1:78381272-78381291 Msa0046330:intron 40.0%
!! CTTATAGCGTCGACAAATAC+AGG + chr1_1:78381326-78381345 Msa0046330:intron 40.0%
TAGTGACTAGATGTGTTACC+AGG - chr1_1:78381352-78381371 None:intergenic 40.0%
!!! CATCTTCGAGCTAGCTTTTA+GGG - chr1_1:78381403-78381422 None:intergenic 40.0%
!!! ACATCTTCGAGCTAGCTTTT+AGG - chr1_1:78381404-78381423 None:intergenic 40.0%
CCTTATCCTTACATGGCTTT+GGG - chr1_1:78381435-78381454 None:intergenic 40.0%
TCCTTATCCTTACATGGCTT+TGG - chr1_1:78381436-78381455 None:intergenic 40.0%
TTCGTGAAATGAGGGAAACA+AGG + chr1_1:78381691-78381710 Msa0046330:CDS 40.0%
TGAAATGAGGGAAACAAGGA+CGG + chr1_1:78381695-78381714 Msa0046330:CDS 40.0%
!! GTTCTGCATTGGCTAAAAAG+GGG + chr1_1:78381763-78381782 Msa0046330:CDS 40.0%
!! TTCTGCATTGGCTAAAAAGG+GGG + chr1_1:78381764-78381783 Msa0046330:CDS 40.0%
! ATGGAATGTGTTGATCCACT+AGG + chr1_1:78381819-78381838 Msa0046330:CDS 40.0%
! ATGTGTTGATCCACTAGGTT+TGG + chr1_1:78381824-78381843 Msa0046330:CDS 40.0%
! TGTGTTGATCCACTAGGTTT+GGG + chr1_1:78381825-78381844 Msa0046330:CDS 40.0%
! CATTGCATGTGCCTTTCTTT+TGG + chr1_1:78381875-78381894 Msa0046330:intron 40.0%
CCAGCTATAAGCCAAAAGAA+AGG - chr1_1:78381889-78381908 None:intergenic 40.0%
!!! CCTTTCTTTTGGCTTATAGC+TGG + chr1_1:78381886-78381905 Msa0046330:intron 40.0%
TCCTGGTGGTTTATTGGTAT+TGG + chr1_1:78381950-78381969 Msa0046330:intron 40.0%
ACCAATACCAATAAACCACC+AGG - chr1_1:78381954-78381973 None:intergenic 40.0%
!!! GTGAAGGTTCTGTTTTTGGA+AGG + chr1_1:78382404-78382423 Msa0046330:intron 40.0%
! TCAAAAGACGAAGATAGTGG+AGG + chr1_1:78382555-78382574 Msa0046330:intron 40.0%
TAGTGGAGGAAAAACACCAT+AGG + chr1_1:78382569-78382588 Msa0046330:intron 40.0%
AGAGTATAGGTCTGAACTTG+GGG + chr1_1:78382710-78382729 Msa0046330:intron 40.0%
TTAGATTGAGTCCTGAGTTG+TGG - chr1_1:78382746-78382765 None:intergenic 40.0%
TAAAACCACAATCGACGGTA+TGG + chr1_1:78383309-78383328 Msa0046330:intron 40.0%
! GAGAAAGAGAGTGTGAACTT+GGG - chr1_1:78383420-78383439 None:intergenic 40.0%
! TGAGAAAGAGAGTGTGAACT+TGG - chr1_1:78383421-78383440 None:intergenic 40.0%
TATTCAAGGAGTTAGTTCGC+AGG + chr1_1:78383604-78383623 Msa0046330:CDS 40.0%
TGGCTTCTTATGAGTTGTGT+AGG + chr1_1:78383732-78383751 Msa0046330:intron 40.0%
! GTGAATATGATTTGGCTGTC+AGG + chr1_1:78383851-78383870 Msa0046330:CDS 40.0%
ACAAAACGAGGGGGATAAAA+GGG - chr1_1:78384585-78384604 None:intergenic 40.0%
AACAAAACGAGGGGGATAAA+AGG - chr1_1:78384586-78384605 None:intergenic 40.0%
CATGCTAAAACAAAACGAGG+GGG - chr1_1:78384594-78384613 None:intergenic 40.0%
AATGTGACATTGTGGTGTTC+TGG + chr1_1:78384753-78384772 Msa0046330:intron 40.0%
!!! TTGGTGTTTTTTCTGCACGA+GGG + chr1_1:78384931-78384950 Msa0046330:intron 40.0%
TGTAGCTTGAGAATACAGTG+AGG + chr1_1:78384980-78384999 Msa0046330:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+GGG + chr1_1:78385206-78385225 Msa0046330:intron 40.0%
!! TTACCCCGTTTTTACACAAG+AGG - chr1_1:78385213-78385232 None:intergenic 40.0%
TCTTGTGTAAAAACGGGGTA+AGG + chr1_1:78385212-78385231 Msa0046330:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr1_1:78385238-78385257 Msa0046330:intron 40.0%
TCAACAATTTGGCTATCCCA+TGG - chr1_1:78385580-78385599 None:intergenic 40.0%
TCACAGAATCAGAGAATACG+TGG + chr1_1:78385621-78385640 Msa0046330:intron 40.0%
TTCTTGAATCTGCTTCCATC+TGG - chr1_1:78385730-78385749 None:intergenic 40.0%
GAAGAATTGAGCGAATCTGT+AGG + chr1_1:78385747-78385766 Msa0046330:intron 40.0%
TATCAACAACTCCTATCCTG+CGG + chr1_1:78385850-78385869 Msa0046330:CDS 40.0%
AGTAGATCTAACTGGTGAAG+AGG + chr1_1:78385886-78385905 Msa0046330:CDS 40.0%
TGATTACAGCGGTCAATCTA+CGG - chr1_1:78385937-78385956 None:intergenic 40.0%
TCCATCATATACCAGCTTTC+TGG + chr1_1:78385957-78385976 Msa0046330:CDS 40.0%
TCCAGAAAGCTGGTATATGA+TGG - chr1_1:78385961-78385980 None:intergenic 40.0%
TCATATACCAGCTTTCTGGA+AGG + chr1_1:78385961-78385980 Msa0046330:CDS 40.0%
CAATTGAGTCAAGATAGCAG+AGG - chr1_1:78386158-78386177 None:intergenic 40.0%
CTCTGCTATCTTGACTCAAT+TGG + chr1_1:78386156-78386175 Msa0046330:intron 40.0%
CATTGCGGAAACTTCATCAA+GGG - chr1_1:78386408-78386427 None:intergenic 40.0%
TCATTGCGGAAACTTCATCA+AGG - chr1_1:78386409-78386428 None:intergenic 40.0%
TGCAGCACAATATCACTGTA+TGG + chr1_1:78386431-78386450 Msa0046330:intron 40.0%
TGGACTAAAAAGTGGGTACA+TGG - chr1_1:78386562-78386581 None:intergenic 40.0%
!! CACACAAGACCATAGTTTTG+GGG - chr1_1:78386861-78386880 None:intergenic 40.0%
! CACACACAAGACCATAGTTT+TGG - chr1_1:78386863-78386882 None:intergenic 40.0%
GGATTTGGCATATACCATGT+AGG - chr1_1:78387328-78387347 None:intergenic 40.0%
CATATTCCTGTCTGTTTGAG+AGG - chr1_1:78387431-78387450 None:intergenic 40.0%
CTCTCAAACAGACAGGAATA+TGG + chr1_1:78387429-78387448 Msa0046330:intron 40.0%
GGCAGATTATCAGGATATGT+AGG - chr1_1:78387578-78387597 None:intergenic 40.0%
TTCAATGGCATCACTCATGT+AGG - chr1_1:78387657-78387676 None:intergenic 40.0%
!! ATGTTCTAAGGCTTTGCTCT+TGG + chr1_1:78387851-78387870 Msa0046330:CDS 40.0%
! TAACCTAAGTTTGAGGTCAC+AGG - chr1_1:78388230-78388249 None:intergenic 40.0%
! TTTAGGATGTGGGCCAATAA+TGG + chr1_1:78388328-78388347 Msa0046330:intron 40.0%
TAGTCAACTTAAACAGAGGG+GGG - chr1_1:78388419-78388438 None:intergenic 40.0%
TAAATCATGAAGAATCCGGG+TGG + chr1_1:78388437-78388456 Msa0046330:intron 40.0%
!! TCCCAATTACTTTTGCATGG+AGG + chr1_1:78388472-78388491 Msa0046330:intron 40.0%
ACACATTAGGAGTTCAAAGG+AGG + chr1_1:78388590-78388609 Msa0046330:intron 40.0%
TCCAGCAAAATGATCTTCCA+AGG + chr1_1:78388690-78388709 Msa0046330:intron 40.0%
! TCCTTGGAAGATCATTTTGC+TGG - chr1_1:78388694-78388713 None:intergenic 40.0%
CATCACAGCAAAGATAGTGT+AGG - chr1_1:78388860-78388879 None:intergenic 40.0%
TACCAAGACAAGTGTATTGC+GGG - chr1_1:78388973-78388992 None:intergenic 40.0%
! TTTTGTTGCCTCACTCCTTA+AGG - chr1_1:78389058-78389077 None:intergenic 40.0%
! AACTGTTTCCTGGATTTTGC+TGG + chr1_1:78389138-78389157 Msa0046330:CDS 40.0%
TCAACATACCAGCAAAATCC+AGG - chr1_1:78389149-78389168 None:intergenic 40.0%
GAGCGTATTGGAATTGAACT+TGG + chr1_1:78389319-78389338 Msa0046330:CDS 40.0%
AAGGTTCCCATTTCCCTAAT+GGG + chr1_1:78389362-78389381 Msa0046330:CDS 40.0%
GTGTATACCCATTAGGGAAA+TGG - chr1_1:78389372-78389391 None:intergenic 40.0%
GCTTCAAGTGTATACCCATT+AGG - chr1_1:78389379-78389398 None:intergenic 40.0%
GAAAATGCACCTTCTGATCT+TGG + chr1_1:78389403-78389422 Msa0046330:CDS 40.0%
TCTCGCATTGGATAGTCATA+TGG - chr1_1:78389783-78389802 None:intergenic 40.0%
ATGTGTATTGAGTCTCGCAT+TGG - chr1_1:78389795-78389814 None:intergenic 40.0%
! GGAGATATGGAGTGTTATTC+AGG + chr1_1:78389832-78389851 Msa0046330:intron 40.0%
! GATATGGAGTGTTATTCAGG+TGG + chr1_1:78389835-78389854 Msa0046330:intron 40.0%
CTAAAATAGCTAATGGCGTG+AGG + chr1_1:78389936-78389955 Msa0046330:intron 40.0%
AGTGATATGGCCTGAAATAG+TGG - chr1_1:78389979-78389998 None:intergenic 40.0%
GGCCATATCACTATTCAATG+TGG + chr1_1:78389987-78390006 Msa0046330:intron 40.0%
ACTATTCAATGTGGGACTCT+CGG + chr1_1:78389996-78390015 Msa0046330:intron 40.0%
TTGTCCAAGCTATAGATCTC+CGG + chr1_1:78390382-78390401 Msa0046330:intron 40.0%
CAATAAACACCCTCAGACAA+AGG - chr1_1:78390409-78390428 None:intergenic 40.0%
! GAAGCATGGACTAATGTGAA+TGG - chr1_1:78390446-78390465 None:intergenic 40.0%
CACATAGGCAACAATAGAAG+AGG - chr1_1:78390741-78390760 None:intergenic 40.0%
CTTGGGAACCTTTAATTCAG+GGG + chr1_1:78390824-78390843 Msa0046330:intron 40.0%
TTGGGAACCTTTAATTCAGG+GGG + chr1_1:78390825-78390844 Msa0046330:intron 40.0%
! CTACAGAGCAGTTTTTGAAC+AGG - chr1_1:78391496-78391515 None:intergenic 40.0%
CACTATCTTGGTTTCTCATC+AGG + chr1_1:78391543-78391562 Msa0046330:intron 40.0%
TAGGTTCTCACTTTAACTGC+GGG - chr1_1:78391634-78391653 None:intergenic 40.0%
CTAGGTTCTCACTTTAACTG+CGG - chr1_1:78391635-78391654 None:intergenic 40.0%
! GGAGTTCTGATCATGATGTA+TGG - chr1_1:78391992-78392011 None:intergenic 40.0%
!! CCAGTATTTTCATGGCTTTG+AGG - chr1_1:78392013-78392032 None:intergenic 40.0%
CCTCAAAGCCATGAAAATAC+TGG + chr1_1:78392010-78392029 Msa0046330:intron 40.0%
! GAAGAGCATATGTGCTTCAT+AGG - chr1_1:78392122-78392141 None:intergenic 40.0%
TCTCAAATTACTAGCGGTGT+CGG + chr1_1:78392231-78392250 Msa0046330:intron 40.0%
AGTGGATCTACATACACATC+AGG + chr1_1:78392481-78392500 Msa0046330:intron 40.0%
GTGGATCTACATACACATCA+GGG + chr1_1:78392482-78392501 Msa0046330:intron 40.0%
TGACCTCGGAATATGTCAAA+TGG + chr1_1:78392526-78392545 Msa0046330:intron 40.0%
!! TTTTGTGGGCCTTGTGTTAA+TGG + chr1_1:78392603-78392622 Msa0046330:intron 40.0%
! TTCTGTTCGCATTGGTATTG+AGG + chr1_1:78392634-78392653 Msa0046330:intron 40.0%
CTGATGTGAACTGTTGTCAT+AGG + chr1_1:78392830-78392849 Msa0046330:intron 40.0%
! CTGTTGTCATAGGTTTTTGC+TGG + chr1_1:78392840-78392859 Msa0046330:intron 40.0%
! CCAAGTGTTTTATCCAAGAG+AGG - chr1_1:78392873-78392892 None:intergenic 40.0%
CCTCTCTTGGATAAAACACT+TGG + chr1_1:78392870-78392889 Msa0046330:CDS 40.0%
TAAAACACTTGGCATTCTCG+TGG + chr1_1:78392881-78392900 Msa0046330:CDS 40.0%
ATTCTGTCAACTCATGCTTG+AGG + chr1_1:78392980-78392999 Msa0046330:CDS 40.0%
CTGTGAAATCTCTCAAGTCT+TGG + chr1_1:78393183-78393202 Msa0046330:intron 40.0%
TGTCAAGTGACAAACAACAC+GGG - chr1_1:78393268-78393287 None:intergenic 40.0%
GCATAGTATTTCCTCCCTAA+TGG - chr1_1:78393441-78393460 None:intergenic 40.0%
TTAGGGAGGAAATACTATGC+AGG + chr1_1:78393441-78393460 Msa0046330:intron 40.0%
TAGGGAGGAAATACTATGCA+GGG + chr1_1:78393442-78393461 Msa0046330:intron 40.0%
GAGGTGAAAAAAAGTGGAAG+GGG + chr1_1:78393518-78393537 Msa0046330:intron 40.0%
TCAAACTTAAGAGTTGGGTG+AGG - chr1_1:78393687-78393706 None:intergenic 40.0%
GCCCAATCAAACTTAAGAGT+TGG - chr1_1:78393693-78393712 None:intergenic 40.0%
AAGGACTGTCAAACTTCATG+TGG + chr1_1:78394031-78394050 Msa0046330:intron 40.0%
ATGCTTCGTTAGCTAGATAC+TGG + chr1_1:78394152-78394171 Msa0046330:intron 40.0%
TGCTTCGTTAGCTAGATACT+GGG + chr1_1:78394153-78394172 Msa0046330:intron 40.0%
CTTGCATCGGATGTGAAATA+TGG - chr1_1:78394433-78394452 None:intergenic 40.0%
CTTCAAGGAATCTCTTGCAT+CGG - chr1_1:78394446-78394465 None:intergenic 40.0%
GCACTTGCAGATGATAAACA+AGG + chr1_1:78394565-78394584 Msa0046330:CDS 40.0%
!! TATGCTCTCTTGATTTGTGC+TGG + chr1_1:78394689-78394708 Msa0046330:intron 40.0%
!! ATGCTCTCTTGATTTGTGCT+GGG + chr1_1:78394690-78394709 Msa0046330:intron 40.0%
TCCTTCAATCAGAACTTGAG+CGG + chr1_1:78394929-78394948 Msa0046330:CDS 40.0%
CTTTGCAGAATCCATTCCTT+TGG + chr1_1:78394972-78394991 Msa0046330:CDS 40.0%
AGTGCACTTACGGTTTATTG+TGG - chr1_1:78395320-78395339 None:intergenic 40.0%
GACAAAACTGAGTGCACTTA+CGG - chr1_1:78395330-78395349 None:intergenic 40.0%
!! GTGCACTCAGTTTTGTCATT+CGG + chr1_1:78395333-78395352 Msa0046330:three_prime_UTR 40.0%
!! TGCACTCAGTTTTGTCATTC+GGG + chr1_1:78395334-78395353 Msa0046330:three_prime_UTR 40.0%
!!! TGTCATTCGGGTTTTAAAGG+GGG + chr1_1:78395346-78395365 Msa0046330:three_prime_UTR 40.0%
AGCTGAATTTCTGTAGCCTT+TGG + chr1_1:78395379-78395398 Msa0046330:three_prime_UTR 40.0%
GAACATTCTTTCTTCCTCCC+CGG + chr1_1:78378670-78378689 Msa0046330:five_prime_UTR 45.0%
AACGGAATGGGATAGAGAAG+AGG - chr1_1:78378747-78378766 None:intergenic 45.0%
ATTGCTCCTTTAACGCCATC+TGG - chr1_1:78378837-78378856 None:intergenic 45.0%
ACAACTCTCCCTTTCGTTTG+AGG - chr1_1:78378976-78378995 None:intergenic 45.0%
! TGATGACGATGATTCCGAAG+TGG + chr1_1:78378999-78379018 Msa0046330:CDS 45.0%
GTTACATCGTCGAAGAATCG+AGG + chr1_1:78379069-78379088 Msa0046330:CDS 45.0%
TCAACATGCTTCCAACGACT+AGG - chr1_1:78379147-78379166 None:intergenic 45.0%
! GAAGCATGTTGATGAAGCTG+AGG + chr1_1:78379155-78379174 Msa0046330:CDS 45.0%
!! ATAATCTTGGTGTCGGACAC+TGG + chr1_1:78379456-78379475 Msa0046330:intron 45.0%
ACGTTGACACATGTTGGACA+CGG + chr1_1:78379557-78379576 Msa0046330:intron 45.0%
TGGCAGTGTCAATTCCTCAT+TGG + chr1_1:78379736-78379755 Msa0046330:intron 45.0%
TGGTTCAAACCAGTAGTCCA+TGG - chr1_1:78380037-78380056 None:intergenic 45.0%
CATGAACCCTTGAACATAGC+CGG + chr1_1:78380093-78380112 Msa0046330:intron 45.0%
AAAGCTCCGGCTATGTTCAA+GGG - chr1_1:78380102-78380121 None:intergenic 45.0%
TAAAGCTCCGGCTATGTTCA+AGG - chr1_1:78380103-78380122 None:intergenic 45.0%
TTTAGAAGGTCTCACTGCGA+TGG + chr1_1:78380134-78380153 Msa0046330:intron 45.0%
GTCCCATATTGGATGAGAGA+TGG + chr1_1:78380706-78380725 Msa0046330:intron 45.0%
GGCCATCTCTCATCCAATAT+GGG - chr1_1:78380711-78380730 None:intergenic 45.0%
AGGCCATCTCTCATCCAATA+TGG - chr1_1:78380712-78380731 None:intergenic 45.0%
CCACTAGGAAACACTTGTTC+AGG - chr1_1:78380732-78380751 None:intergenic 45.0%
CCTGAACAAGTGTTTCCTAG+TGG + chr1_1:78380729-78380748 Msa0046330:intron 45.0%
GAACAAGTGTTTCCTAGTGG+GGG + chr1_1:78380732-78380751 Msa0046330:intron 45.0%
!! CCTTAAAAAACCGGCTTGTG+AGG - chr1_1:78380767-78380786 None:intergenic 45.0%
!!! CCTCACAAGCCGGTTTTTTA+AGG + chr1_1:78380764-78380783 Msa0046330:intron 45.0%
ACGACTCTTGGAATCTAGGA+TGG + chr1_1:78381058-78381077 Msa0046330:intron 45.0%
TCTCATGCCCAAGAGACATT+TGG + chr1_1:78381255-78381274 Msa0046330:intron 45.0%
CCATGCTCCAAATGTCTCTT+GGG - chr1_1:78381265-78381284 None:intergenic 45.0%
TCCATGCTCCAAATGTCTCT+TGG - chr1_1:78381266-78381285 None:intergenic 45.0%
! TTTGGAGCATGGACAAATGC+GGG + chr1_1:78381273-78381292 Msa0046330:intron 45.0%
CTATAAGTCCTAGGCATGAG+GGG - chr1_1:78381313-78381332 None:intergenic 45.0%
GCTATAAGTCCTAGGCATGA+GGG - chr1_1:78381314-78381333 None:intergenic 45.0%
TTGTCGACGCTATAAGTCCT+AGG - chr1_1:78381322-78381341 None:intergenic 45.0%
AAAGCTAGCTCGAAGATGTG+AGG + chr1_1:78381405-78381424 Msa0046330:intron 45.0%
CCCAAAGCCATGTAAGGATA+AGG + chr1_1:78381432-78381451 Msa0046330:intron 45.0%
AGCCATATCTCTAGTCGATG+TGG + chr1_1:78381463-78381482 Msa0046330:intron 45.0%
GCCATATCTCTAGTCGATGT+GGG + chr1_1:78381464-78381483 Msa0046330:intron 45.0%
! TCCCACATCGACTAGAGATA+TGG - chr1_1:78381468-78381487 None:intergenic 45.0%
! TTCTTTGACAGCTTGCTCGT+AGG + chr1_1:78381667-78381686 Msa0046330:intron 45.0%
! TCTTTGACAGCTTGCTCGTA+GGG + chr1_1:78381668-78381687 Msa0046330:intron 45.0%
TCGTAGGGTTCGTGAAATGA+GGG + chr1_1:78381683-78381702 Msa0046330:CDS 45.0%
!! TCTGCATTGGCTAAAAAGGG+GGG + chr1_1:78381765-78381784 Msa0046330:CDS 45.0%
ACGAGGGAATGACTGTAAGT+AGG - chr1_1:78381796-78381815 None:intergenic 45.0%
TACTTACAGTCATTCCCTCG+TGG + chr1_1:78381795-78381814 Msa0046330:CDS 45.0%
! GTGTTGATCCACTAGGTTTG+GGG + chr1_1:78381826-78381845 Msa0046330:CDS 45.0%
GAACTTTACCCCAAACCTAG+TGG - chr1_1:78381837-78381856 None:intergenic 45.0%
TTCTTCGGAGGGATTAATCC+TGG + chr1_1:78381933-78381952 Msa0046330:intron 45.0%
AGGAGAACTGTCTGAAGACT+CGG - chr1_1:78382018-78382037 None:intergenic 45.0%
CAGTTCTCCTAAGACTGACA+AGG + chr1_1:78382028-78382047 Msa0046330:CDS 45.0%
TCAGCATCCTTGTCAGTCTT+AGG - chr1_1:78382038-78382057 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr1_1:78382166-78382185 Msa0046330:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr1_1:78382167-78382186 Msa0046330:intron 45.0%
TGACTGTAAGACTGCTTCCT+AGG - chr1_1:78382307-78382326 None:intergenic 45.0%
ATTCTAGCATAACTGCCTGC+CGG - chr1_1:78382439-78382458 None:intergenic 45.0%
GAGTATAGGTCTGAACTTGG+GGG + chr1_1:78382711-78382730 Msa0046330:intron 45.0%
GTGTGCAAAAGCCTACATCT+GGG + chr1_1:78382785-78382804 Msa0046330:intron 45.0%
GGAAGTGGTCACAAAACTGA+AGG + chr1_1:78382817-78382836 Msa0046330:intron 45.0%
! TCTCTCTGGTGTTTTGCTCA+TGG + chr1_1:78382908-78382927 Msa0046330:intron 45.0%
! TAATACAAGTGCTGCTGACC+TGG + chr1_1:78383192-78383211 Msa0046330:CDS 45.0%
TACTGAGCAGAGAAAGCAGT+TGG + chr1_1:78383255-78383274 Msa0046330:CDS 45.0%
GCAGAGAAAGCAGTTGGTTA+AGG + chr1_1:78383261-78383280 Msa0046330:CDS 45.0%
GAATTGAGGATGACCCTGAA+GGG + chr1_1:78383555-78383574 Msa0046330:CDS 45.0%
GCGTTCGAATAAAGGCTTCA+AGG - chr1_1:78383639-78383658 None:intergenic 45.0%
AACCTACCAAGTACTATCCG+TGG + chr1_1:78383814-78383833 Msa0046330:CDS 45.0%
AGAGGGAAGAGCAATTGACT+TGG - chr1_1:78383890-78383909 None:intergenic 45.0%
CCTCTTCAAGAACACGTTTC+AGG - chr1_1:78384196-78384215 None:intergenic 45.0%
CCTGAAACGTGTTCTTGAAG+AGG + chr1_1:78384193-78384212 Msa0046330:CDS 45.0%
! GTTTGCTAGTCATGTTGGAC+AGG + chr1_1:78384310-78384329 Msa0046330:intron 45.0%
AACAGTCCTAGTAGCATCAC+TGG - chr1_1:78384373-78384392 None:intergenic 45.0%
!! TGTGGTGTTCTGGAGAACAT+AGG + chr1_1:78384763-78384782 Msa0046330:intron 45.0%
AACTGACACTGACAGCAACA+TGG + chr1_1:78384844-78384863 Msa0046330:intron 45.0%
!!! CTTGGTGTTTTTTCTGCACG+AGG + chr1_1:78384930-78384949 Msa0046330:intron 45.0%
CAACTTTACCAGTTGCGCTA+AGG - chr1_1:78385146-78385165 None:intergenic 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr1_1:78385162-78385181 Msa0046330:intron 45.0%
AAGGTCACAGGTTCAAGTCT+TGG + chr1_1:78385181-78385200 Msa0046330:intron 45.0%
CAGCCTCTTGTGTAAAAACG+GGG + chr1_1:78385207-78385226 Msa0046330:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1_1:78385234-78385253 Msa0046330:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr1_1:78385237-78385256 Msa0046330:intron 45.0%
AACAGTAAATAGGGGGAACC+CGG - chr1_1:78385304-78385323 None:intergenic 45.0%
AGCCAAATTGTTGAGTCCAC+TGG + chr1_1:78385586-78385605 Msa0046330:intron 45.0%
! AGCCAGTGGACTCAACAATT+TGG - chr1_1:78385591-78385610 None:intergenic 45.0%
GTGAAGAAAACAACAGCCAG+TGG - chr1_1:78385605-78385624 None:intergenic 45.0%
! AATTTTCCATTCTGGCCTCG+TGG - chr1_1:78385671-78385690 None:intergenic 45.0%
GCGTAACGAGTTGCATGAAA+AGG + chr1_1:78385692-78385711 Msa0046330:CDS 45.0%
GCGAATCTGTAGGTGCAAAA+TGG + chr1_1:78385757-78385776 Msa0046330:intron 45.0%
AGATCTAACTGGTGAAGAGG+TGG + chr1_1:78385889-78385908 Msa0046330:CDS 45.0%
AGGGAGAAAAAGTGGGTACT+TGG + chr1_1:78386649-78386668 Msa0046330:intron 45.0%
ACAACTAGGAGTGACAGAGT+GGG - chr1_1:78387262-78387281 None:intergenic 45.0%
AACAACTAGGAGTGACAGAG+TGG - chr1_1:78387263-78387282 None:intergenic 45.0%
TAACTGGAATAGTCGCGTCA+AGG - chr1_1:78387377-78387396 None:intergenic 45.0%
GATTGACCTCTCAAACAGAC+AGG + chr1_1:78387422-78387441 Msa0046330:intron 45.0%
! ATCTAAAGCATGCGCAGCTT+TGG + chr1_1:78387682-78387701 Msa0046330:CDS 45.0%
!! ATGCGCAGCTTTGGAAATGA+AGG + chr1_1:78387691-78387710 Msa0046330:CDS 45.0%
TAATTGATACCTGCAACCGG+AGG - chr1_1:78387725-78387744 None:intergenic 45.0%
!! ATCAGTTGAAGAGGTGTCGA+AGG + chr1_1:78387882-78387901 Msa0046330:CDS 45.0%
GGCAGGTAAGAGATTGCATA+TGG - chr1_1:78387952-78387971 None:intergenic 45.0%
ACAGCTGAGCGGAATGTTAA+AGG - chr1_1:78387973-78387992 None:intergenic 45.0%
TTGCTGAAGATACAGCTGAG+CGG - chr1_1:78387984-78388003 None:intergenic 45.0%
CTCAGCTGTATCTTCAGCAA+TGG + chr1_1:78387984-78388003 Msa0046330:CDS 45.0%
TTGAGGTCACAGGAACTCTA+TGG - chr1_1:78388220-78388239 None:intergenic 45.0%
GTTCCTGTGACCTCAAACTT+AGG + chr1_1:78388224-78388243 Msa0046330:intron 45.0%
!! AAAGCCGAGTCTTTAGGATG+TGG + chr1_1:78388317-78388336 Msa0046330:intron 45.0%
!! AAGCCGAGTCTTTAGGATGT+GGG + chr1_1:78388318-78388337 Msa0046330:intron 45.0%
CATTAGGAGTTCAAAGGAGG+AGG + chr1_1:78388593-78388612 Msa0046330:intron 45.0%
ACCAAGACAAGTGTATTGCG+GGG - chr1_1:78388972-78388991 None:intergenic 45.0%
! AAGGATCGAAGCATCCTGAA+GGG - chr1_1:78389039-78389058 None:intergenic 45.0%
! TAAGGATCGAAGCATCCTGA+AGG - chr1_1:78389040-78389059 None:intergenic 45.0%
TCAGGATGCTTCGATCCTTA+AGG + chr1_1:78389040-78389059 Msa0046330:intron 45.0%
CAACATAGCTCACACAGAGA+AGG + chr1_1:78389343-78389362 Msa0046330:CDS 45.0%
GAAGGTTCCCATTTCCCTAA+TGG + chr1_1:78389361-78389380 Msa0046330:CDS 45.0%
AATGCACCTTCTGATCTTGG+AGG + chr1_1:78389406-78389425 Msa0046330:CDS 45.0%
!! TGGTTCTAACTCAACCCCTA+AGG + chr1_1:78389708-78389727 Msa0046330:intron 45.0%
! CAACCCCTAAGGTTAGCTAA+TGG + chr1_1:78389719-78389738 Msa0046330:intron 45.0%
CCTCCATTAGCTAACCTTAG+GGG - chr1_1:78389725-78389744 None:intergenic 45.0%
GCCTCCATTAGCTAACCTTA+GGG - chr1_1:78389726-78389745 None:intergenic 45.0%
TGCCTCCATTAGCTAACCTT+AGG - chr1_1:78389727-78389746 None:intergenic 45.0%
! TAAGGTTAGCTAATGGAGGC+AGG + chr1_1:78389726-78389745 Msa0046330:intron 45.0%
! AAGGTTAGCTAATGGAGGCA+GGG + chr1_1:78389727-78389746 Msa0046330:intron 45.0%
ACACTCCATATCTCCAGTCA+TGG - chr1_1:78389827-78389846 None:intergenic 45.0%
! TCAGGTGGCTTAATAATGGG+TGG + chr1_1:78389850-78389869 Msa0046330:intron 45.0%
!! CAGGTGGCTTAATAATGGGT+GGG + chr1_1:78389851-78389870 Msa0046330:intron 45.0%
! ACATCTGGAACGTGACTAAG+TGG + chr1_1:78390052-78390071 Msa0046330:intron 45.0%
GACTAAGTGGTCAATAAGCG+TGG + chr1_1:78390065-78390084 Msa0046330:intron 45.0%
!!! CTAGCTTTTGGGGTTGAGTT+AGG - chr1_1:78390141-78390160 None:intergenic 45.0%
!!! ATGCATGGGAGCTAGCTTTT+GGG - chr1_1:78390152-78390171 None:intergenic 45.0%
TGGGAACAACTCTCATGCAT+GGG - chr1_1:78390166-78390185 None:intergenic 45.0%
CTCGCAACACCTATCATCAA+AGG + chr1_1:78390229-78390248 Msa0046330:intron 45.0%
CAGAGATCTTGGCCCTATAA+TGG - chr1_1:78390347-78390366 None:intergenic 45.0%
ATAGCTTGGACAAATGTGGG+TGG - chr1_1:78390375-78390394 None:intergenic 45.0%
TGTCCAAGCTATAGATCTCC+GGG + chr1_1:78390383-78390402 Msa0046330:intron 45.0%
GGGACTAGACAATTGAAGCA+TGG - chr1_1:78390460-78390479 None:intergenic 45.0%
ATTGTCTAGTCCCGAGTGTT+AGG + chr1_1:78390467-78390486 Msa0046330:intron 45.0%
TTGTCTAGTCCCGAGTGTTA+GGG + chr1_1:78390468-78390487 Msa0046330:intron 45.0%
TCAACACATCCCCTAACACT+CGG - chr1_1:78390481-78390500 None:intergenic 45.0%
TTGCTCGAGAGAAACTCTCT+CGG - chr1_1:78390673-78390692 None:intergenic 45.0%
GAACCTTTAATTCAGGGGGA+AGG + chr1_1:78390829-78390848 Msa0046330:intron 45.0%
CATCCTTCCCCCTGAATTAA+AGG - chr1_1:78390835-78390854 None:intergenic 45.0%
TAATTCAGGGGGAAGGATGA+AGG + chr1_1:78390836-78390855 Msa0046330:intron 45.0%
AGTAGAGTTGCTGCACACAT+TGG + chr1_1:78391794-78391813 Msa0046330:CDS 45.0%
ATGGCTGGAGAAGAATGTTC+AGG - chr1_1:78392079-78392098 None:intergenic 45.0%
TGAACATTCTTCTCCAGCCA+TGG + chr1_1:78392078-78392097 Msa0046330:intron 45.0%
!! ATATGCGTCTGGTGTCATGT+CGG - chr1_1:78392188-78392207 None:intergenic 45.0%
CTAGCTATGAAGCACAGACA+TGG - chr1_1:78392280-78392299 None:intergenic 45.0%
TGACAACAGTTCACATCAGC+TGG - chr1_1:78392829-78392848 None:intergenic 45.0%
AGAACGCCTATTCTACCCTA+GGG + chr1_1:78393608-78393627 Msa0046330:intron 45.0%
GACTGTCAAACTTCATGTGG+TGG + chr1_1:78394034-78394053 Msa0046330:intron 45.0%
GATATGAACACCCAGAGATG+TGG + chr1_1:78394232-78394251 Msa0046330:intron 45.0%
ACAATCCAGGACATAATCGC+CGG + chr1_1:78394521-78394540 Msa0046330:CDS 45.0%
!! TGCTCTCTTGATTTGTGCTG+GGG + chr1_1:78394691-78394710 Msa0046330:intron 45.0%
! TCCGCTCAAGTTCTGATTGA+AGG - chr1_1:78394933-78394952 None:intergenic 45.0%
TGAGCGGACACGCATTAATA+CGG + chr1_1:78394945-78394964 Msa0046330:CDS 45.0%
TGAGTTCTTGTAGGGAGAGT+AGG - chr1_1:78395025-78395044 None:intergenic 45.0%
CTCTCCCTACAAGAACTCAA+TGG + chr1_1:78395026-78395045 Msa0046330:CDS 45.0%
!! ATAAAAATTAAAGATTAAAA+AGG - chr1_1:78385466-78385485 None:intergenic 5.0%
!!! TCTTTAATTTTTATATTTTT+TGG + chr1_1:78385472-78385491 Msa0046330:intron 5.0%
!! AAAATTAAGAAATAATTAAT+GGG - chr1_1:78385506-78385525 None:intergenic 5.0%
!! AAAAATTAAGAAATAATTAA+TGG - chr1_1:78385507-78385526 None:intergenic 5.0%
!!! ATTTTTTTTTTTTTTTTGAA+GGG - chr1_1:78386132-78386151 None:intergenic 5.0%
CCGGTGAATGTGAACGGAAT+GGG - chr1_1:78378759-78378778 None:intergenic 50.0%
CCCATTCCGTTCACATTCAC+CGG + chr1_1:78378756-78378775 Msa0046330:five_prime_UTR 50.0%
TGAAGACGAGCTTCTCCAGA+TGG + chr1_1:78378819-78378838 Msa0046330:CDS 50.0%
GCTTCTCCAGATGGCGTTAA+AGG + chr1_1:78378828-78378847 Msa0046330:CDS 50.0%
!! GGGTTTTCGAGGATTGGAAG+AGG - chr1_1:78378887-78378906 None:intergenic 50.0%
!! TAGTTAGCGACGGGTTTTCG+AGG - chr1_1:78378898-78378917 None:intergenic 50.0%
GGTTGAACGTAGTTAGCGAC+GGG - chr1_1:78378907-78378926 None:intergenic 50.0%
CGGTTGAACGTAGTTAGCGA+CGG - chr1_1:78378908-78378927 None:intergenic 50.0%
! TTTCGTTTGAGGTTTCGCGG+TGG - chr1_1:78378965-78378984 None:intergenic 50.0%
ACCGCGAAACCTCAAACGAA+AGG + chr1_1:78378964-78378983 Msa0046330:CDS 50.0%
! CCCTTTCGTTTGAGGTTTCG+CGG - chr1_1:78378968-78378987 None:intergenic 50.0%
CCGCGAAACCTCAAACGAAA+GGG + chr1_1:78378965-78378984 Msa0046330:CDS 50.0%
!! ACGAAGCGCTGACACAAACA+CGG + chr1_1:78379391-78379410 Msa0046330:intron 50.0%
! GTGTCGACGTTGACACATGT+TGG + chr1_1:78379551-78379570 Msa0046330:intron 50.0%
AGGAATTGACACTGCCAGAG+CGG - chr1_1:78379733-78379752 None:intergenic 50.0%
! ACGATGTGACCATGGACTAC+TGG + chr1_1:78380025-78380044 Msa0046330:intron 50.0%
CGGCTATGTTCAAGGGTTCA+TGG - chr1_1:78380095-78380114 None:intergenic 50.0%
!! AAAAACCGGCTTGTGAGGTG+AGG - chr1_1:78380762-78380781 None:intergenic 50.0%
GGCTGTCTACTTGTGTTGAG+TGG + chr1_1:78380918-78380937 Msa0046330:intron 50.0%
CTTGGACAATCCTCACCTCT+GGG - chr1_1:78381179-78381198 None:intergenic 50.0%
! CCCAAGAGACATTTGGAGCA+TGG + chr1_1:78381262-78381281 Msa0046330:intron 50.0%
TAACAACACCCCTCATGCCT+AGG + chr1_1:78381302-78381321 Msa0046330:intron 50.0%
CGCTATAAGTCCTAGGCATG+AGG - chr1_1:78381315-78381334 None:intergenic 50.0%
GGATTGCCCAAAGCCATGTA+AGG + chr1_1:78381426-78381445 Msa0046330:intron 50.0%
CTCGTAGGGTTCGTGAAATG+AGG + chr1_1:78381682-78381701 Msa0046330:CDS 50.0%
!! CTGCATTGGCTAAAAAGGGG+GGG + chr1_1:78381766-78381785 Msa0046330:CDS 50.0%
CAACACATTCCATGCCACGA+GGG - chr1_1:78381812-78381831 None:intergenic 50.0%
TCAACACATTCCATGCCACG+AGG - chr1_1:78381813-78381832 None:intergenic 50.0%
TTCGGAGGGATTAATCCTGG+TGG + chr1_1:78381936-78381955 Msa0046330:intron 50.0%
GATGCTGATAGCAACCTACG+TGG + chr1_1:78382050-78382069 Msa0046330:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr1_1:78382168-78382187 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr1_1:78382165-78382184 Msa0046330:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr1_1:78382171-78382190 Msa0046330:intron 50.0%
ACACCATAGGCTTCACACCT+AGG + chr1_1:78382582-78382601 Msa0046330:intron 50.0%
CACCATAGGCTTCACACCTA+GGG + chr1_1:78382583-78382602 Msa0046330:intron 50.0%
AACCCTAGGTGTGAAGCCTA+TGG - chr1_1:78382588-78382607 None:intergenic 50.0%
CGTGTGCAAAAGCCTACATC+TGG + chr1_1:78382784-78382803 Msa0046330:intron 50.0%
! TCTGGTGTTTTGCTCATGGC+TGG + chr1_1:78382912-78382931 Msa0046330:intron 50.0%
! CAAGTCCATACCGTCGATTG+TGG - chr1_1:78383317-78383336 None:intergenic 50.0%
CGAATTGAGGATGACCCTGA+AGG + chr1_1:78383554-78383573 Msa0046330:CDS 50.0%
GAAGCCTTTATTCGAACGCC+AGG + chr1_1:78383640-78383659 Msa0046330:CDS 50.0%
CCTTTATTCGAACGCCAGGT+GGG + chr1_1:78383644-78383663 Msa0046330:intron 50.0%
GACTTCAGAATTCACCCACC+TGG - chr1_1:78383661-78383680 None:intergenic 50.0%
TGCCACGGATAGTACTTGGT+AGG - chr1_1:78383819-78383838 None:intergenic 50.0%
ATGCTGCCACGGATAGTACT+TGG - chr1_1:78383823-78383842 None:intergenic 50.0%
TATCCGTGGCAGCATTAGCA+AGG + chr1_1:78383828-78383847 Msa0046330:CDS 50.0%
ATCCGTGGCAGCATTAGCAA+GGG + chr1_1:78383829-78383848 Msa0046330:CDS 50.0%
TTGGGACCAGTGATGCTACT+AGG + chr1_1:78384364-78384383 Msa0046330:intron 50.0%
TTATCCCCCTCACTCTGCTT+TGG + chr1_1:78384661-78384680 Msa0046330:intron 50.0%
TATGCCAAAGCAGAGTGAGG+GGG - chr1_1:78384668-78384687 None:intergenic 50.0%
CTATGCCAAAGCAGAGTGAG+GGG - chr1_1:78384669-78384688 None:intergenic 50.0%
CCTATGCCAAAGCAGAGTGA+GGG - chr1_1:78384670-78384689 None:intergenic 50.0%
ACCTATGCCAAAGCAGAGTG+AGG - chr1_1:78384671-78384690 None:intergenic 50.0%
! GTTGGATTTGGAGCCAGAGT+CGG + chr1_1:78385008-78385027 Msa0046330:CDS 50.0%
TCATGTGACTGGAAGGTCAC+AGG + chr1_1:78385169-78385188 Msa0046330:intron 50.0%
GCAGTGTACATTAGACCACG+AGG + chr1_1:78385653-78385672 Msa0046330:CDS 50.0%
ATTAGACCACGAGGCCAGAA+TGG + chr1_1:78385662-78385681 Msa0046330:CDS 50.0%
AGGCTCTTTCTGATGCCAGA+TGG + chr1_1:78385712-78385731 Msa0046330:CDS 50.0%
CTAACTGGTGAAGAGGTGGA+TGG + chr1_1:78385893-78385912 Msa0046330:CDS 50.0%
GAAGAGGTGGATGGTCTAAG+AGG + chr1_1:78385902-78385921 Msa0046330:CDS 50.0%
AGGTGGATGGTCTAAGAGGA+AGG + chr1_1:78385906-78385925 Msa0046330:CDS 50.0%
AGTGCAACCTTCCAGAAAGC+TGG - chr1_1:78385971-78385990 None:intergenic 50.0%
! GTTGCACTCTCCGTTTTCAG+TGG + chr1_1:78385983-78386002 Msa0046330:CDS 50.0%
CTGTGGGAACTTGAGAAGAC+TGG - chr1_1:78386316-78386335 None:intergenic 50.0%
AGGTCACGAGAATCCCTACA+TGG + chr1_1:78387311-78387330 Msa0046330:intron 50.0%
TGGCATCACTCATGTAGGAC+CGG - chr1_1:78387652-78387671 None:intergenic 50.0%
AATGAAGGAAGCAGCTCCTC+CGG + chr1_1:78387706-78387725 Msa0046330:CDS 50.0%
GATGCGAGCATCAGTTGAAG+AGG + chr1_1:78387873-78387892 Msa0046330:CDS 50.0%
!! AGGTGTCGAAGGATGTCTCA+TGG + chr1_1:78387893-78387912 Msa0046330:CDS 50.0%
! GGTGTCGAAGGATGTCTCAT+GGG + chr1_1:78387894-78387913 Msa0046330:CDS 50.0%
CTGAGCGGAATGTTAAAGGC+AGG - chr1_1:78387969-78387988 None:intergenic 50.0%
TGGCCCACATCCTAAAGACT+CGG - chr1_1:78388324-78388343 None:intergenic 50.0%
GGAGTTCTATTCTTGCCACC+CGG - chr1_1:78388455-78388474 None:intergenic 50.0%
TGGCAGGGTGGTCTTTGATA+TGG - chr1_1:78388506-78388525 None:intergenic 50.0%
CACTGACATGAATGCTGCCA+GGG - chr1_1:78388543-78388562 None:intergenic 50.0%
TCACTGACATGAATGCTGCC+AGG - chr1_1:78388544-78388563 None:intergenic 50.0%
GAGTTCAAAGGAGGAGGTCT+CGG + chr1_1:78388599-78388618 Msa0046330:intron 50.0%
AGTTCAAAGGAGGAGGTCTC+GGG + chr1_1:78388600-78388619 Msa0046330:intron 50.0%
CAAGACAAGTGTATTGCGGG+GGG - chr1_1:78388970-78388989 None:intergenic 50.0%
CCAAGACAAGTGTATTGCGG+GGG - chr1_1:78388971-78388990 None:intergenic 50.0%
GCTTCGATCCTTAAGGAGTG+AGG + chr1_1:78389047-78389066 Msa0046330:CDS 50.0%
!! TGGAGTGCTGCCAGATATGT+CGG - chr1_1:78389525-78389544 None:intergenic 50.0%
! CCCCTAAGGTTAGCTAATGG+AGG + chr1_1:78389722-78389741 Msa0046330:intron 50.0%
! AGGTTAGCTAATGGAGGCAG+GGG + chr1_1:78389728-78389747 Msa0046330:intron 50.0%
ATCTCCAGTCATGGTCGTGA+GGG - chr1_1:78389818-78389837 None:intergenic 50.0%
TATCTCCAGTCATGGTCGTG+AGG - chr1_1:78389819-78389838 None:intergenic 50.0%
CACGACCATGACTGGAGATA+TGG + chr1_1:78389819-78389838 Msa0046330:intron 50.0%
CGTTCCAGATGTTCAGTCCT+AGG - chr1_1:78390044-78390063 None:intergenic 50.0%
GGTCAATAAGCGTGGCCTAA+CGG + chr1_1:78390073-78390092 Msa0046330:intron 50.0%
ACAACCCATCCAGATCCGTT+AGG - chr1_1:78390091-78390110 None:intergenic 50.0%
!!! TGCATGGGAGCTAGCTTTTG+GGG - chr1_1:78390151-78390170 None:intergenic 50.0%
!!! CATGCATGGGAGCTAGCTTT+TGG - chr1_1:78390153-78390172 None:intergenic 50.0%
GTGGGAACAACTCTCATGCA+TGG - chr1_1:78390167-78390186 None:intergenic 50.0%
GGGTGGAAGAACAGAGATCT+TGG - chr1_1:78390358-78390377 None:intergenic 50.0%
TGTCTAGTCCCGAGTGTTAG+GGG + chr1_1:78390469-78390488 Msa0046330:intron 50.0%
CAACACATCCCCTAACACTC+GGG - chr1_1:78390480-78390499 None:intergenic 50.0%
TTTCTCAGGGCTCGAAGAGA+AGG + chr1_1:78390889-78390908 Msa0046330:CDS 50.0%
GCACCCCTCACCTTACAATT+TGG - chr1_1:78391300-78391319 None:intergenic 50.0%
CGTTGCAGCAGATCTGATCA+AGG - chr1_1:78391572-78391591 None:intergenic 50.0%
! ATTGGTAGCCGTTCATGCAG+AGG + chr1_1:78391812-78391831 Msa0046330:CDS 50.0%
!! TGCTTGTCTTTCGGTGTCCA+TGG - chr1_1:78392098-78392117 None:intergenic 50.0%
ACACAACACATGTCCGACAC+CGG - chr1_1:78392159-78392178 None:intergenic 50.0%
ACAGACATGGACACAGACAC+CGG - chr1_1:78392267-78392286 None:intergenic 50.0%
ACTCAGGCGGGTAATCAACT+TGG - chr1_1:78392375-78392394 None:intergenic 50.0%
! TGCTGGTGCTAAACCTCTCT+TGG + chr1_1:78392857-78392876 Msa0046330:CDS 50.0%
ACACTTGGCATTCTCGTGGA+AGG + chr1_1:78392885-78392904 Msa0046330:CDS 50.0%
GTATTTCCTCCCTAATGGGG+TGG - chr1_1:78393436-78393455 None:intergenic 50.0%
GGAGGAAATACTATGCAGGG+AGG + chr1_1:78393445-78393464 Msa0046330:intron 50.0%
GAGAACGCCTATTCTACCCT+AGG + chr1_1:78393607-78393626 Msa0046330:intron 50.0%
CCTATTCTACCCTAGGGTGT+GGG + chr1_1:78393614-78393633 Msa0046330:intron 50.0%
CTATTCTACCCTAGGGTGTG+GGG + chr1_1:78393615-78393634 Msa0046330:intron 50.0%
! GGGAGTGACAGGGTGTTTAA+GGG + chr1_1:78393635-78393654 Msa0046330:intron 50.0%
! GTGACAGGGTGTTTAAGGGA+CGG + chr1_1:78393639-78393658 Msa0046330:intron 50.0%
! TGACAGGGTGTTTAAGGGAC+GGG + chr1_1:78393640-78393659 Msa0046330:intron 50.0%
CTCAACCTGCCATATAGCTG+AGG + chr1_1:78394188-78394207 Msa0046330:intron 50.0%
ACCTGCCATATAGCTGAGGT+TGG + chr1_1:78394192-78394211 Msa0046330:intron 50.0%
CCTGCCATATAGCTGAGGTT+GGG + chr1_1:78394193-78394212 Msa0046330:intron 50.0%
GTGACCCAACCTCAGCTATA+TGG - chr1_1:78394200-78394219 None:intergenic 50.0%
TATAGCTGAGGTTGGGTCAC+CGG + chr1_1:78394200-78394219 Msa0046330:intron 50.0%
TGTTCATATCCGTCCTGACC+CGG - chr1_1:78394222-78394241 None:intergenic 50.0%
! CTCGAAGTACTCAAGCTGCA+AGG - chr1_1:78394398-78394417 None:intergenic 50.0%
! AGCCACTGAGAGTGTGATTG+AGG + chr1_1:78394492-78394511 Msa0046330:CDS 50.0%
AGCCTCAATCACACTCTCAG+TGG - chr1_1:78394497-78394516 None:intergenic 50.0%
ATTGAGGCTGTCGACAATCC+AGG + chr1_1:78394508-78394527 Msa0046330:CDS 50.0%
CAATCCAGGACATAATCGCC+GGG + chr1_1:78394522-78394541 Msa0046330:CDS 50.0%
!! GCTCTCTTGATTTGTGCTGG+GGG + chr1_1:78394692-78394711 Msa0046330:intron 50.0%
TCTTGCACAGCAGTACAGCT+CGG + chr1_1:78394903-78394922 Msa0046330:CDS 50.0%
TGGCACAGAGTCCAAAGGAA+TGG - chr1_1:78394986-78395005 None:intergenic 50.0%
TAGGCAGATTTGGCAGGTTC+TGG - chr1_1:78395006-78395025 None:intergenic 50.0%
GTAGGGAGAGTAGGCAGATT+TGG - chr1_1:78395016-78395035 None:intergenic 50.0%
GCCGGTGAATGTGAACGGAA+TGG - chr1_1:78378760-78378779 None:intergenic 55.0%
GCTTCGCCGGTGAATGTGAA+CGG - chr1_1:78378765-78378784 None:intergenic 55.0%
GAAACTCGTCACTGCTTCGC+CGG - chr1_1:78378778-78378797 None:intergenic 55.0%
!! AGCGACGGGTTTTCGAGGAT+TGG - chr1_1:78378893-78378912 None:intergenic 55.0%
GAGCGTTTCGGTTGAGACGA+CGG - chr1_1:78378931-78378950 None:intergenic 55.0%
TCGTCGAAGAATCGAGGGAG+TGG + chr1_1:78379075-78379094 Msa0046330:CDS 55.0%
TCGAGGGAGTGGAAGAACTC+CGG + chr1_1:78379086-78379105 Msa0046330:CDS 55.0%
ATGGTGAGGAGCCTAGTCGT+TGG + chr1_1:78379133-78379152 Msa0046330:CDS 55.0%
!! CGAAGCGCTGACACAAACAC+GGG + chr1_1:78379392-78379411 Msa0046330:intron 55.0%
GTAGTCCTCACCTCACAAGC+CGG + chr1_1:78380754-78380773 Msa0046330:intron 55.0%
TAACCCCAAGCGATACCCAG+AGG + chr1_1:78381161-78381180 Msa0046330:intron 55.0%
! TCACCTCTGGGTATCGCTTG+GGG - chr1_1:78381167-78381186 None:intergenic 55.0%
! CTCACCTCTGGGTATCGCTT+GGG - chr1_1:78381168-78381187 None:intergenic 55.0%
GCTTGGACAATCCTCACCTC+TGG - chr1_1:78381180-78381199 None:intergenic 55.0%
!! AGCGTCGACAAATACAGGCC+TGG + chr1_1:78381331-78381350 Msa0046330:intron 55.0%
ACAGTCATTCCCTCGTGGCA+TGG + chr1_1:78381800-78381819 Msa0046330:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr1_1:78382173-78382192 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr1_1:78382179-78382198 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr1_1:78382180-78382199 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr1_1:78382179-78382198 Msa0046330:intron 55.0%
! GGAAGGTTAACTGTACCGGC+AGG + chr1_1:78382421-78382440 Msa0046330:intron 55.0%
GCTTCACACCTAGGGTTCTC+AGG + chr1_1:78382591-78382610 Msa0046330:intron 55.0%
GGCTAACGAGTCCACAACTC+AGG + chr1_1:78382732-78382751 Msa0046330:intron 55.0%
! TACAAGTGCTGCTGACCTGG+AGG + chr1_1:78383195-78383214 Msa0046330:CDS 55.0%
AGGATGACCCTGAAGGGTCT+GGG + chr1_1:78383561-78383580 Msa0046330:CDS 55.0%
GCCTTTATTCGAACGCCAGG+TGG + chr1_1:78383643-78383662 Msa0046330:intron 55.0%
CCCACCTGGCGTTCGAATAA+AGG - chr1_1:78383647-78383666 None:intergenic 55.0%
CTGTCCAAGGGATGCTACAG+AGG + chr1_1:78383776-78383795 Msa0046330:CDS 55.0%
GGAACCTCTGTAGCATCCCT+TGG - chr1_1:78383783-78383802 None:intergenic 55.0%
CACCCTTGCTAATGCTGCCA+CGG - chr1_1:78383834-78383853 None:intergenic 55.0%
! GGCTGTCAGGGAGTACAAGA+AGG + chr1_1:78383864-78383883 Msa0046330:CDS 55.0%
CCCTCACTCTGCTTTGGCAT+AGG + chr1_1:78384667-78384686 Msa0046330:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_1:78385277-78385296 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_1:78385278-78385297 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr1_1:78385282-78385301 Msa0046330:intron 55.0%
ATGAGACTGGACCGCAGGAT+AGG - chr1_1:78385864-78385883 None:intergenic 55.0%
ACTGAATGAGACTGGACCGC+AGG - chr1_1:78385869-78385888 None:intergenic 55.0%
AGGAGGCAGGGAGATAATGC+TGG - chr1_1:78387236-78387255 None:intergenic 55.0%
AGCATTATCTCCCTGCCTCC+TGG + chr1_1:78387235-78387254 Msa0046330:intron 55.0%
GACATGATCATGAGCGAGCC+AGG - chr1_1:78388120-78388139 None:intergenic 55.0%
CCCCCGCAATACACTTGTCT+TGG + chr1_1:78388968-78388987 Msa0046330:intron 55.0%
GGCTTCTTCGGTTGACTGTC+AGG + chr1_1:78389289-78389308 Msa0046330:intron 55.0%
GCACCTTCTGATCTTGGAGG+AGG + chr1_1:78389409-78389428 Msa0046330:CDS 55.0%
ACGCCTCCTCCAAGATCAGA+AGG - chr1_1:78389415-78389434 None:intergenic 55.0%
GACATATCTGGCAGCACTCC+AGG + chr1_1:78389524-78389543 Msa0046330:CDS 55.0%
ACATCCCTCACGACCATGAC+TGG + chr1_1:78389811-78389830 Msa0046330:intron 55.0%
GATGTTCAGTCCTAGGCGAG+AGG - chr1_1:78390037-78390056 None:intergenic 55.0%
CTCGCCTAGGACTGAACATC+TGG + chr1_1:78390037-78390056 Msa0046330:intron 55.0%
! TAAGCGTGGCCTAACGGATC+TGG + chr1_1:78390079-78390098 Msa0046330:intron 55.0%
! GTGGCCTAACGGATCTGGAT+GGG + chr1_1:78390084-78390103 Msa0046330:intron 55.0%
AGGCCCGGAGATCTATAGCT+TGG - chr1_1:78390389-78390408 None:intergenic 55.0%
ATCTCCGGGCCTTTGTCTGA+GGG + chr1_1:78390397-78390416 Msa0046330:intron 55.0%
AACACCCTCAGACAAAGGCC+CGG - chr1_1:78390404-78390423 None:intergenic 55.0%
GCAACTCTACTGCTGCATCG+CGG - chr1_1:78391785-78391804 None:intergenic 55.0%
!! TGTCTTTCGGTGTCCATGGC+TGG - chr1_1:78392094-78392113 None:intergenic 55.0%
AGGGCTACTGTCCTGACGAA+GGG + chr1_1:78392501-78392520 Msa0046330:intron 55.0%
CCTGACGAAGGGTTTGACCT+CGG + chr1_1:78392512-78392531 Msa0046330:intron 55.0%
GGGTGTGTACCACCCCATTA+GGG + chr1_1:78393424-78393443 Msa0046330:intron 55.0%
TGTGTACCACCCCATTAGGG+AGG + chr1_1:78393427-78393446 Msa0046330:intron 55.0%
GCCTATTCTACCCTAGGGTG+TGG + chr1_1:78393613-78393632 Msa0046330:intron 55.0%
CCCACACCCTAGGGTAGAAT+AGG - chr1_1:78393617-78393636 None:intergenic 55.0%
! GGGGAGTGACAGGGTGTTTA+AGG + chr1_1:78393634-78393653 Msa0046330:intron 55.0%
CCCAACCTCAGCTATATGGC+AGG - chr1_1:78394196-78394215 None:intergenic 55.0%
ATAGCTGAGGTTGGGTCACC+GGG + chr1_1:78394201-78394220 Msa0046330:intron 55.0%
CTGGGGGTGATGCAACTGTT+CGG + chr1_1:78394708-78394727 Msa0046330:intron 55.0%
! GGTTCTGGCACAGAGTCCAA+AGG - chr1_1:78394991-78395010 None:intergenic 55.0%
GGAGAGTAGGCAGATTTGGC+AGG - chr1_1:78395012-78395031 None:intergenic 55.0%
! CCTCTGGAGGATGATCTGCT+TGG - chr1_1:78395057-78395076 None:intergenic 55.0%
CCAAGCAGATCATCCTCCAG+AGG + chr1_1:78395054-78395073 Msa0046330:CDS 55.0%
CGTTTCGGTTGAGACGACGG+CGG - chr1_1:78378928-78378947 None:intergenic 60.0%
! GTTTGAGGTTTCGCGGTGGC+CGG - chr1_1:78378961-78378980 None:intergenic 60.0%
GAGTGGAAGAACTCCGGCGA+GGG + chr1_1:78379092-78379111 Msa0046330:CDS 60.0%
GAGGGAGGAGGATCGGACTT+GGG + chr1_1:78379110-78379129 Msa0046330:CDS 60.0%
GAGGAGGATCGGACTTGGGA+TGG + chr1_1:78379114-78379133 Msa0046330:CDS 60.0%
GGATCGGACTTGGGATGGTG+AGG + chr1_1:78379119-78379138 Msa0046330:CDS 60.0%
! TCTTCCACTCTGTGCCGCTC+TGG + chr1_1:78379716-78379735 Msa0046330:intron 60.0%
TCTCACTGCGATGGCGAGCT+TGG + chr1_1:78380143-78380162 Msa0046330:intron 60.0%
CTCACTGCGATGGCGAGCTT+GGG + chr1_1:78380144-78380163 Msa0046330:intron 60.0%
AGGTGAGGACTACCCCCACT+AGG - chr1_1:78380747-78380766 None:intergenic 60.0%
! CCTCACCTCTGGGTATCGCT+TGG - chr1_1:78381169-78381188 None:intergenic 60.0%
CCAAGCGATACCCAGAGGTG+AGG + chr1_1:78381166-78381185 Msa0046330:intron 60.0%
GGAGCATGGACAAATGCGGG+CGG + chr1_1:78381276-78381295 Msa0046330:intron 60.0%
GGAAACAAGGACGGCACCTG+TGG + chr1_1:78381704-78381723 Msa0046330:CDS 60.0%
CACCTAGGGTTCTCAGGTCC+AGG + chr1_1:78382597-78382616 Msa0046330:intron 60.0%
TGCCTGGACCTGAGAACCCT+AGG - chr1_1:78382602-78382621 None:intergenic 60.0%
GAGGATGACCCTGAAGGGTC+TGG + chr1_1:78383560-78383579 Msa0046330:CDS 60.0%
GGGAAGTCCCAGACCCTTCA+GGG - chr1_1:78383571-78383590 None:intergenic 60.0%
TGGGAAGTCCCAGACCCTTC+AGG - chr1_1:78383572-78383591 None:intergenic 60.0%
AGCCAGAGTCGGACCCAGTA+TGG + chr1_1:78385019-78385038 Msa0046330:CDS 60.0%
TGCCATACTGGGTCCGACTC+TGG - chr1_1:78385024-78385043 None:intergenic 60.0%
! AGGGGTAGCCTTAGCGCAAC+TGG + chr1_1:78385135-78385154 Msa0046330:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr1_1:78385250-78385269 Msa0046330:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr1_1:78385283-78385302 Msa0046330:intron 60.0%
AGTGACAGAGTGGGACCAGG+AGG - chr1_1:78387253-78387272 None:intergenic 60.0%
AGGAGTGACAGAGTGGGACC+AGG - chr1_1:78387256-78387275 None:intergenic 60.0%
ACAAGTGTATTGCGGGGGGC+GGG - chr1_1:78388966-78388985 None:intergenic 60.0%
GACAAGTGTATTGCGGGGGG+CGG - chr1_1:78388967-78388986 None:intergenic 60.0%
CAACACACCACCTCTCGCCT+AGG + chr1_1:78390024-78390043 Msa0046330:intron 60.0%
GTTCAGTCCTAGGCGAGAGG+TGG - chr1_1:78390034-78390053 None:intergenic 60.0%
! CGTGGCCTAACGGATCTGGA+TGG + chr1_1:78390083-78390102 Msa0046330:intron 60.0%
GATCTCCGGGCCTTTGTCTG+AGG + chr1_1:78390396-78390415 Msa0046330:intron 60.0%
CAGGGCTACTGTCCTGACGA+AGG + chr1_1:78392500-78392519 Msa0046330:intron 60.0%
CCGAGGTCAAACCCTTCGTC+AGG - chr1_1:78392515-78392534 None:intergenic 60.0%
GGGGTGTGTACCACCCCATT+AGG + chr1_1:78393423-78393442 Msa0046330:intron 60.0%
CTGTCACTCCCCACACCCTA+GGG - chr1_1:78393626-78393645 None:intergenic 60.0%
CTAGGGTGTGGGGAGTGACA+GGG + chr1_1:78393625-78393644 Msa0046330:intron 60.0%
GTTGCCCGGCGATTATGTCC+TGG - chr1_1:78394529-78394548 None:intergenic 60.0%
CATAATCGCCGGGCAACTCG+CGG + chr1_1:78394532-78394551 Msa0046330:CDS 60.0%
CTTCACTACCGCGAGTTGCC+CGG - chr1_1:78394543-78394562 None:intergenic 60.0%
ACCGAAACGCTCAGCGCCTC+CGG + chr1_1:78378939-78378958 Msa0046330:CDS 65.0%
GGAGTGGAAGAACTCCGGCG+AGG + chr1_1:78379091-78379110 Msa0046330:CDS 65.0%
TGGAAGAACTCCGGCGAGGG+AGG + chr1_1:78379095-78379114 Msa0046330:CDS 65.0%
AAGAACTCCGGCGAGGGAGG+AGG + chr1_1:78379098-78379117 Msa0046330:CDS 65.0%
CGAGGGAGGAGGATCGGACT+TGG + chr1_1:78379109-78379128 Msa0046330:CDS 65.0%
ACTGCCAGAGCGGCACAGAG+TGG - chr1_1:78379723-78379742 None:intergenic 65.0%
! AGTGCTGCTGACCTGGAGGC+TGG + chr1_1:78383199-78383218 Msa0046330:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr1_1:78385252-78385271 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_1:78385265-78385284 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_1:78385266-78385285 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_1:78385265-78385284 Msa0046330:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_1:78385266-78385285 Msa0046330:intron 65.0%
CAGAGTGGGACCAGGAGGCA+GGG - chr1_1:78387248-78387267 None:intergenic 65.0%
ACAGAGTGGGACCAGGAGGC+AGG - chr1_1:78387249-78387268 None:intergenic 65.0%
GAAGCAGCTCCTCCGGTTGC+AGG + chr1_1:78387713-78387732 Msa0046330:CDS 65.0%
GAGGTCTCGGGTTCGATCCC+CGG + chr1_1:78388612-78388631 Msa0046330:intron 65.0%
CCTGTCACTCCCCACACCCT+AGG - chr1_1:78393627-78393646 None:intergenic 65.0%
CCTAGGGTGTGGGGAGTGAC+AGG + chr1_1:78393624-78393643 Msa0046330:intron 65.0%
TGAGGTTGGGTCACCGGGTC+AGG + chr1_1:78394206-78394225 Msa0046330:intron 65.0%
GTTGGGTCACCGGGTCAGGA+CGG + chr1_1:78394210-78394229 Msa0046330:intron 65.0%
!! GCCGGAGGCGCTGAGCGTTT+CGG - chr1_1:78378943-78378962 None:intergenic 70.0%
TGAGGTTTCGCGGTGGCCGG+AGG - chr1_1:78378958-78378977 None:intergenic 70.0%
CTCCGGCGAGGGAGGAGGAT+CGG + chr1_1:78379103-78379122 Msa0046330:CDS 70.0%
GTCCGATCCTCCTCCCTCGC+CGG - chr1_1:78379108-78379127 None:intergenic 70.0%
TGACCTGGAGGCTGGTGCGC+TGG + chr1_1:78383207-78383226 Msa0046330:CDS 70.0%
AAGCCAGCGCACCAGCCTCC+AGG - chr1_1:78383213-78383232 None:intergenic 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_1:78385267-78385286 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr1_1:78385271-78385290 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr1_1:78385272-78385291 None:intergenic 70.0%
!! CGGTGTCGGCGTGTCGTGTC+CGG + chr1_1:78392245-78392264 Msa0046330:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 78378648 78395412 78378648 ID=Msa0046330;Name=Msa0046330
chr1_1 mRNA 78378648 78395412 78378648 ID=Msa0046330-mRNA-1;Parent=Msa0046330;Name=Msa0046330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=154|0.9|0.90|1|1|0.95|21|290|1070
chr1_1 exon 78378648 78379176 78378648 ID=Msa0046330-mRNA-1:exon:26995;Parent=Msa0046330-mRNA-1
chr1_1 exon 78381678 78381847 78381678 ID=Msa0046330-mRNA-1:exon:26996;Parent=Msa0046330-mRNA-1
chr1_1 exon 78381983 78382068 78381983 ID=Msa0046330-mRNA-1:exon:26997;Parent=Msa0046330-mRNA-1
chr1_1 exon 78383131 78383325 78383131 ID=Msa0046330-mRNA-1:exon:26998;Parent=Msa0046330-mRNA-1
chr1_1 exon 78383534 78383661 78383534 ID=Msa0046330-mRNA-1:exon:26999;Parent=Msa0046330-mRNA-1
chr1_1 exon 78383754 78383912 78383754 ID=Msa0046330-mRNA-1:exon:27000;Parent=Msa0046330-mRNA-1
chr1_1 exon 78384179 78384289 78384179 ID=Msa0046330-mRNA-1:exon:27001;Parent=Msa0046330-mRNA-1
chr1_1 exon 78384985 78385059 78384985 ID=Msa0046330-mRNA-1:exon:27002;Parent=Msa0046330-mRNA-1
chr1_1 exon 78385627 78385764 78385627 ID=Msa0046330-mRNA-1:exon:27003;Parent=Msa0046330-mRNA-1
chr1_1 exon 78385845 78386018 78385845 ID=Msa0046330-mRNA-1:exon:27004;Parent=Msa0046330-mRNA-1
chr1_1 exon 78386317 78386415 78386317 ID=Msa0046330-mRNA-1:exon:27005;Parent=Msa0046330-mRNA-1
chr1_1 exon 78387608 78387734 78387608 ID=Msa0046330-mRNA-1:exon:27006;Parent=Msa0046330-mRNA-1
chr1_1 exon 78387809 78388019 78387809 ID=Msa0046330-mRNA-1:exon:27007;Parent=Msa0046330-mRNA-1
chr1_1 exon 78389044 78389159 78389044 ID=Msa0046330-mRNA-1:exon:27008;Parent=Msa0046330-mRNA-1
chr1_1 exon 78389311 78389545 78389311 ID=Msa0046330-mRNA-1:exon:27009;Parent=Msa0046330-mRNA-1
chr1_1 exon 78390844 78390937 78390844 ID=Msa0046330-mRNA-1:exon:27010;Parent=Msa0046330-mRNA-1
chr1_1 exon 78391565 78391642 78391565 ID=Msa0046330-mRNA-1:exon:27011;Parent=Msa0046330-mRNA-1
chr1_1 exon 78391777 78391833 78391777 ID=Msa0046330-mRNA-1:exon:27012;Parent=Msa0046330-mRNA-1
chr1_1 exon 78392852 78393001 78392852 ID=Msa0046330-mRNA-1:exon:27013;Parent=Msa0046330-mRNA-1
chr1_1 exon 78394403 78394615 78394403 ID=Msa0046330-mRNA-1:exon:27014;Parent=Msa0046330-mRNA-1
chr1_1 exon 78394901 78395412 78394901 ID=Msa0046330-mRNA-1:exon:27015;Parent=Msa0046330-mRNA-1
chr1_1 five_prime_UTR 78378648 78378801 78378648 ID=Msa0046330-mRNA-1:five_prime_utr;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78378802 78379176 78378802 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78381678 78381847 78381678 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78381983 78382068 78381983 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78383131 78383325 78383131 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78383534 78383661 78383534 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78383754 78383912 78383754 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78384179 78384289 78384179 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78384985 78385059 78384985 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78385627 78385764 78385627 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78385845 78386018 78385845 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78386317 78386415 78386317 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78387608 78387734 78387608 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78387809 78388019 78387809 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78389044 78389159 78389044 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78389311 78389545 78389311 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78390844 78390937 78390844 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78391565 78391642 78391565 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78391777 78391833 78391777 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78392852 78393001 78392852 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78394403 78394615 78394403 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 CDS 78394901 78395122 78394901 ID=Msa0046330-mRNA-1:cds;Parent=Msa0046330-mRNA-1
chr1_1 three_prime_UTR 78395123 78395412 78395123 ID=Msa0046330-mRNA-1:three_prime_utr;Parent=Msa0046330-mRNA-1
Gene Sequence

>Msa0046330

ATGTCGAGCGACAGCGATGAAGACGAGCTTCTCCAGATGGCGTTAAAGGAGCAATCACAACGAGATCTCAACTACGGCAAATCCTCTTCCAATCCTCGAAAACCCGTCGCTAACTACGTTCAACCGCCGTCGTCTCAACCGAAACGCTCAGCGCCTCCGGCCACCGCGAAACCTCAAACGAAAGGGAGAGTTGTCGATGATGACGATGATTCCGAAGTGGAGATGCTTAGTATTTCTAGCGGTGATGAGGATAATGTTAAAGATCAGGTTACATCGTCGAAGAATCGAGGGAGTGGAAGAACTCCGGCGAGGGAGGAGGATCGGACTTGGGATGGTGAGGAGCCTAGTCGTTGGAAGCATGTTGATGAAGCTGAGCTTGCTCGTAGGGTTCGTGAAATGAGGGAAACAAGGACGGCACCTGTGGCTCAAAAATTTATAGCTCCAAAATTTGAAAGAAAAAGTTCTGCATTGGCTAAAAAGGGGGGGCTTACCTACTTACAGTCATTCCCTCGTGGCATGGAATGTGTTGATCCACTAGGTTTGGGGATCATTGACAACAGAACACTAAAGTTGATAACCGAGTCTTCAGACAGTTCTCCTAAGACTGACAAGGATGCTGATAGCAACCTACAGAAATTGCTTTATTTTTCGGAGAACTTTGATGCAAAATTGTTCTTATCACGGATACACTGTAATACAAGTGCTGCTGACCTGGAGGCTGGTGCGCTGGCTTTGAAAACCGATTATAAAAGTCGTACTGAGCAGAGAAAGCAGTTGGTTAAGGACAACTTTGACTGTTTTGTCTCTTGTAAAACCACAATCGACGATATTGAGTCAAAGTTAAGACGAATTGAGGATGACCCTGAAGGGTCTGGGACTTCCCATTTGTTTAATATTATTCAAGGAGTTAGTTCGCAGGCTAATCGTGCCTTGAAGCCTTTATTCGAACGCCAGGCTCAAGCAGAAAAAATTAGGACTGTCCAAGGGATGCTACAGAGGTTCCGTACACTTTTCAACCTACCAAGTACTATCCGTGGCAGCATTAGCAAGGGTGAATATGATTTGGCTGTCAGGGAGTACAAGAAGGCCAAGTCAATTGCTCTTCCCTCTCATATTCAGGTAGGTATCCTGAAACGTGTTCTTGAAGAGGTTGAAAAAGTAATGAACGAGTTCAAGTCTATGCTTTTCATGTCTATGGAAGATCCGAACATAGATATAACAAATCTTGAGAATACAGTGAGGTTATTGTTGGATTTGGAGCCAGAGTCGGACCCAGTATGGCATTATTTGAATATACAGAATCAGAGAATACGTGGCTTACTTGAGCAGTGTACATTAGACCACGAGGCCAGAATGGAAAATTTGCGTAACGAGTTGCATGAAAAGGCTCTTTCTGATGCCAGATGGAAGCAGATTCAAGAAGAATTGAGCGAATCTTCAGATATCAACAACTCCTATCCTGCGGTCCAGTCTCATTCAGTAGATCTAACTGGTGAAGAGGTGGATGGTCTAAGAGGAAGGTATATCCGTAGATTGACCGCTGTAATCATCCATCATATACCAGCTTTCTGGAAGGTTGCACTCTCCGTTTTCAGTGGAAAGTTTGCTAAGTCTTCTCAAGTTCCCACAGATTCAAATTCCAATAGTTCTGCAAATAAAGTTGAAGAAAAAGCTGGAGATGTTAAATACTCAAGTCATTCCCTTGATGAAGTTACTAACATATTTCATGATCTAGAGGAATCAAATGTCCTCCGGTCCTACATGAGTGATGCCATTGAAGATATATCTAAAGCATGCGCAGCTTTGGAAATGAAGGAAGCAGCTCCTCCGGTTGCAGTTGCTGCTTTGCGAACATTGCAACCAGAGATTATAAGGATTTATGTTCTAAGGCTTTGCTCTTGGATGCGAGCATCAGTTGAAGAGGTGTCGAAGGATGTCTCATGGGTTATTGTTTCAATTCTTGAAAGGAACAAATCGCCATATGCAATCTCTTACCTGCCTTTAACATTCCGCTCAGCTGTATCTTCAGCAATGGATCAGATCAATTTGATGCTTCGATCCTTAAGGAGTGAGGCAACAAAATCAGAAGATACATTTATCCAACTTCAAGAAATTCAAGAATCTGTCAGACTTGCATTTTTAAACTGTTTCCTGGATTTTGCTGGTAATTTAGAGCGTATTGGAATTGAACTTGGGCAACATAGCTCACACAGAGAAGGTTCCCATTTCCCTAATGGGTATACACTTGAAGCAGAAGAAAATGCACCTTCTGATCTTGGAGGAGGCGTTACTGATCCCCATCAACAGTTATTGATTGTACTAAGCAATATTGGATATTGCAAAGATGAACTTTCTTATGAGCTGTATGACAAATACCGACATATCTGGCAGCACTCCAGGGGGAAGGATGAAGGAAACAGTGATGTACAAGATCTTGTAATTTGTTTCTCAGGGCTCGAAGAGAAGGTCCTTGAACAATATACTTTTGCAAAGGCAACCTTGATCAGATCTGCTGCAACGAGTTATCTGTTGAATTCTGGCATTCAATGGGGTGCAGCACCCGCAGTTAAAGGTGTCCGCGATGCAGCAGTAGAGTTGCTGCACACATTGGTAGCCGTTCATGCAGAGGTTTTTGCTGGTGCTAAACCTCTCTTGGATAAAACACTTGGCATTCTCGTGGAAGGCTTGATTGACACATTCATCAGCATTTTTCACGAAAATGAAAGTACAGATCTTAGATCACTGGATACAAATGGATTCTGTCAACTCATGCTTGAGCTTGAGTACTTCGAGACTGTATTAAACCCATATTTCACATCCGATGCAAGAGATTCCTTGAAGTCTTTACAAGGACTACTTTTGGAAAAAGCCACTGAGAGTGTGATTGAGGCTGTCGACAATCCAGGACATAATCGCCGGGCAACTCGCGGTAGTGAAGATGCACTTGCAGATGATAAACAAGGAACAACTGTGTCACCAGACGAGTTAATTTCTCTTGCACAGCAGTACAGCTCGGAGTTCCTTCAATCAGAACTTGAGCGGACACGCATTAATACGGCATGCTTTGCAGAATCCATTCCTTTGGACTCTGTGCCAGAACCTGCCAAATCTGCCTACTCTCCCTACAAGAACTCAATGGATTCTCCAAGCAGATCATCCTCCAGAGGTACATATAATACTGGATCCTCAAATTTTTCACGGCATAGATATTGA
Protein sequence

>Msa0046330

MSSDSDEDELLQMALKEQSQRDLNYGKSSSNPRKPVANYVQPPSSQPKRSAPPATAKPQTKGRVVDDDDDSEVEMLSISSGDEDNVKDQVTSSKNRGSGRTPAREEDRTWDGEEPSRWKHVDEAELARRVREMRETRTAPVAQKFIAPKFERKSSALAKKGGLTYLQSFPRGMECVDPLGLGIIDNRTLKLITESSDSSPKTDKDADSNLQKLLYFSENFDAKLFLSRIHCNTSAADLEAGALALKTDYKSRTEQRKQLVKDNFDCFVSCKTTIDDIESKLRRIEDDPEGSGTSHLFNIIQGVSSQANRALKPLFERQAQAEKIRTVQGMLQRFRTLFNLPSTIRGSISKGEYDLAVREYKKAKSIALPSHIQVGILKRVLEEVEKVMNEFKSMLFMSMEDPNIDITNLENTVRLLLDLEPESDPVWHYLNIQNQRIRGLLEQCTLDHEARMENLRNELHEKALSDARWKQIQEELSESSDINNSYPAVQSHSVDLTGEEVDGLRGRYIRRLTAVIIHHIPAFWKVALSVFSGKFAKSSQVPTDSNSNSSANKVEEKAGDVKYSSHSLDEVTNIFHDLEESNVLRSYMSDAIEDISKACAALEMKEAAPPVAVAALRTLQPEIIRIYVLRLCSWMRASVEEVSKDVSWVIVSILERNKSPYAISYLPLTFRSAVSSAMDQINLMLRSLRSEATKSEDTFIQLQEIQESVRLAFLNCFLDFAGNLERIGIELGQHSSHREGSHFPNGYTLEAEENAPSDLGGGVTDPHQQLLIVLSNIGYCKDELSYELYDKYRHIWQHSRGKDEGNSDVQDLVICFSGLEEKVLEQYTFAKATLIRSAATSYLLNSGIQWGAAPAVKGVRDAAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFISIFHENESTDLRSLDTNGFCQLMLELEYFETVLNPYFTSDARDSLKSLQGLLLEKATESVIEAVDNPGHNRRATRGSEDALADDKQGTTVSPDELISLAQQYSSEFLQSELERTRINTACFAESIPLDSVPEPAKSAYSPYKNSMDSPSRSSSRGTYNTGSSNFSRHRY*