Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046480 | XP_013470199.1 | 95.597 | 477 | 12 | 3 | 1 | 475 | 1 | 470 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046480 | sp|Q9SQI8|ODP24_ARATH | 71.550 | 471 | 126 | 3 | 7 | 475 | 16 | 480 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046480 | Msa0182790 | 0.885207 | 9.921968e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046480 | MtrunA17_Chr1g0210021 | 95.597 | 477 | 12 | 3 | 1 | 475 | 1 | 470 | 0.0 | 900 |
| Msa0046480 | MtrunA17_Chr1g0200441 | 60.833 | 480 | 156 | 7 | 1 | 475 | 5 | 457 | 2.75e-178 | 507 |
| Msa0046480 | MtrunA17_Chr8g0343061 | 33.480 | 454 | 252 | 12 | 47 | 475 | 115 | 543 | 2.91e-64 | 217 |
| Msa0046480 | MtrunA17_Chr1g0197901 | 31.591 | 440 | 267 | 11 | 51 | 475 | 205 | 625 | 9.68e-51 | 182 |
| Msa0046480 | MtrunA17_Chr1g0197901 | 34.711 | 121 | 70 | 2 | 51 | 162 | 79 | 199 | 5.75e-13 | 71.2 |
| Msa0046480 | MtrunA17_Chr4g0067561 | 27.546 | 432 | 296 | 7 | 58 | 475 | 89 | 517 | 6.48e-30 | 122 |
| Msa0046480 | MtrunA17_Chr5g0444531 | 25.116 | 430 | 256 | 11 | 48 | 475 | 88 | 453 | 1.62e-28 | 117 |
| Msa0046480 | MtrunA17_Chr2g0277631 | 24.490 | 441 | 246 | 9 | 48 | 475 | 85 | 451 | 4.25e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0046480 | AT3G25860.1 | 71.550 | 471 | 126 | 3 | 7 | 475 | 16 | 480 | 0.0 | 620 |
| Msa0046480 | AT1G34430.1 | 59.283 | 474 | 165 | 5 | 17 | 475 | 5 | 465 | 2.51e-175 | 500 |
| Msa0046480 | AT1G54220.1 | 34.852 | 439 | 265 | 9 | 47 | 475 | 112 | 539 | 3.69e-65 | 219 |
| Msa0046480 | AT1G54220.2 | 34.852 | 439 | 265 | 9 | 47 | 475 | 112 | 539 | 3.69e-65 | 219 |
| Msa0046480 | AT3G13930.1 | 33.105 | 438 | 274 | 7 | 47 | 475 | 112 | 539 | 4.97e-60 | 206 |
| Msa0046480 | AT3G52200.1 | 31.910 | 445 | 259 | 10 | 51 | 475 | 217 | 637 | 1.41e-52 | 187 |
| Msa0046480 | AT3G52200.1 | 36.800 | 125 | 75 | 2 | 51 | 171 | 90 | 214 | 2.50e-15 | 79.0 |
| Msa0046480 | AT3G52200.2 | 31.910 | 445 | 259 | 10 | 51 | 475 | 293 | 713 | 4.02e-52 | 187 |
| Msa0046480 | AT3G52200.2 | 36.800 | 125 | 75 | 2 | 51 | 171 | 166 | 290 | 1.20e-15 | 80.1 |
| Msa0046480 | AT4G26910.1 | 25.522 | 431 | 256 | 13 | 48 | 475 | 94 | 462 | 2.62e-29 | 120 |
| Msa0046480 | AT4G26910.2 | 25.522 | 431 | 256 | 13 | 48 | 475 | 93 | 461 | 2.80e-29 | 120 |
| Msa0046480 | AT3G06850.1 | 26.267 | 434 | 264 | 10 | 58 | 475 | 87 | 480 | 8.38e-29 | 119 |
| Msa0046480 | AT3G06850.2 | 26.267 | 434 | 264 | 10 | 58 | 475 | 87 | 480 | 8.38e-29 | 119 |
| Msa0046480 | AT4G26910.3 | 25.412 | 425 | 252 | 13 | 54 | 475 | 1 | 363 | 2.07e-28 | 116 |
| Msa0046480 | AT5G55070.1 | 33.155 | 187 | 118 | 4 | 291 | 475 | 281 | 462 | 3.60e-21 | 96.3 |
| Msa0046480 | AT5G55070.2 | 33.155 | 187 | 118 | 4 | 291 | 475 | 281 | 462 | 3.60e-21 | 96.3 |
Find 158 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCACGCTTTCCAATT+TGG | 0.148648 | 1_1:-78633566 | Msa0046480:CDS |
| GCTGATCACCGAATAATTTA+TGG | 0.190235 | 1_1:-78631291 | Msa0046480:CDS |
| GAGAGAATGTGTATTCATTT+TGG | 0.204946 | 1_1:+78635302 | None:intergenic |
| TGCTGCACCAGCTGCGATTC+CGG | 0.219139 | 1_1:-78634563 | Msa0046480:CDS |
| AATAGTAGATACTTAAATTA+TGG | 0.234681 | 1_1:+78630915 | None:intergenic |
| CAACCAAATGAGTATAATTC+AGG | 0.242664 | 1_1:-78633675 | Msa0046480:intron |
| GGGAGGAGCGGTGAGGGAGG+AGG | 0.245830 | 1_1:+78635223 | None:intergenic |
| TGTGACGATGACTGCTATTT+TGG | 0.262165 | 1_1:-78633992 | Msa0046480:CDS |
| AACTCCAAACATACCCAAAT+TGG | 0.269101 | 1_1:+78633552 | None:intergenic |
| GCGGATGTGGAGGCTGCTGC+TGG | 0.275235 | 1_1:-78634661 | Msa0046480:CDS |
| AAAGTTCTTGCCATCTTTGC+AGG | 0.290313 | 1_1:+78633921 | None:intergenic |
| ACTTTCACGCTTTCCAATTT+GGG | 0.319099 | 1_1:-78633565 | Msa0046480:CDS |
| CTTTCCAATTTGGGTATGTT+TGG | 0.319328 | 1_1:-78633556 | Msa0046480:CDS |
| AAACCTGAATTATACTCATT+TGG | 0.322353 | 1_1:+78633672 | None:intergenic |
| CTTGATAACTCCAGTTCTTC+AGG | 0.323849 | 1_1:-78633848 | Msa0046480:CDS |
| AGGTGTCGCTGTGATATTCT+TGG | 0.331912 | 1_1:+78634765 | None:intergenic |
| GCTGCACCAGCTGCGATTCC+GGG | 0.340411 | 1_1:-78634562 | Msa0046480:CDS |
| TGAAGAATAACTATAATGTT+AGG | 0.344401 | 1_1:+78631211 | None:intergenic |
| AACCTGGCCTGGTGGAAGTA+TGG | 0.348432 | 1_1:+78633516 | None:intergenic |
| GGAAAAGGATTTGCGGGGAG+GGG | 0.354418 | 1_1:+78635203 | None:intergenic |
| GAGGGGAGGAGCGGTGAGGG+AGG | 0.354889 | 1_1:+78635220 | None:intergenic |
| CTGTTCCTACTTTCCGTGTT+GGG | 0.363238 | 1_1:-78634474 | Msa0046480:CDS |
| TGAATCTGATAAGGCTGATA+TGG | 0.376491 | 1_1:-78635049 | Msa0046480:CDS |
| GCCGCCGGTGGAGGCGGTGG+TGG | 0.387927 | 1_1:+78634811 | None:intergenic |
| TGAGAGGGGCGGAGAGGACG+AGG | 0.389226 | 1_1:+78635385 | None:intergenic |
| TCAAGAGCATCAGTGATAAC+TGG | 0.389979 | 1_1:+78634448 | None:intergenic |
| CGCCGGAGGAGGAGAGGAAG+AGG | 0.399022 | 1_1:+78634864 | None:intergenic |
| GGAGGAGAGTGGTGAATTGA+GGG | 0.399212 | 1_1:+78635241 | None:intergenic |
| AGGAGGAGAGTGGTGAATTG+AGG | 0.399224 | 1_1:+78635240 | None:intergenic |
| TTTGAAGGAAAAGGATTTGC+GGG | 0.403176 | 1_1:+78635197 | None:intergenic |
| CGGATTTGACGGATTTAGCC+TGG | 0.408800 | 1_1:+78634902 | None:intergenic |
| TTATCAGCATCCTGAAGAAC+TGG | 0.417467 | 1_1:+78633838 | None:intergenic |
| GCTCCGGTTGGTGCTCCAAT+TGG | 0.424384 | 1_1:-78634967 | Msa0046480:CDS |
| GCCGGTGGAGGCGGTGGTGG+AGG | 0.425148 | 1_1:+78634814 | None:intergenic |
| ACCGCCGCCGGTGGAGGCGG+TGG | 0.426146 | 1_1:+78634808 | None:intergenic |
| GGATGATCATTCTAGTATAA+AGG | 0.430095 | 1_1:+78631008 | None:intergenic |
| AGTTCTTCAGGATGCTGATA+AGG | 0.430433 | 1_1:-78633836 | Msa0046480:intron |
| AGTCAGCTCCATAAATTATT+CGG | 0.431962 | 1_1:+78631283 | None:intergenic |
| CGGGGAGGGGAGGAGCGGTG+AGG | 0.432565 | 1_1:+78635216 | None:intergenic |
| TTAACCGCCGCCGGTGGAGG+CGG | 0.434204 | 1_1:+78634805 | None:intergenic |
| AAAGGATTTGCGGGGAGGGG+AGG | 0.434206 | 1_1:+78635206 | None:intergenic |
| TTGCAGGTGGCATTAACAAC+TGG | 0.437102 | 1_1:+78633937 | None:intergenic |
| GGTGGAGGCGGTGGTGGAGG+AGG | 0.439450 | 1_1:+78634817 | None:intergenic |
| GCAGTCATCGTCACACCCTT+AGG | 0.441303 | 1_1:+78634000 | None:intergenic |
| TCCTCCTCCGGCGACTCCTC+AGG | 0.441707 | 1_1:-78634854 | Msa0046480:CDS |
| TAGGATTACTCCGGCGGATG+TGG | 0.442153 | 1_1:-78634674 | Msa0046480:CDS |
| CCTTTAGGCGCGGTGGGAGC+AGG | 0.450725 | 1_1:+78634598 | None:intergenic |
| CCTGCTCCCACCGCGCCTAA+AGG | 0.451441 | 1_1:-78634598 | Msa0046480:CDS |
| AGAAGAAGAAGCGGATTTGA+CGG | 0.452525 | 1_1:+78634891 | None:intergenic |
| TCTGTTCCTACTTTCCGTGT+TGG | 0.452700 | 1_1:-78634475 | Msa0046480:CDS |
| AACAACGACACTATCACCTT+TGG | 0.458858 | 1_1:+78635074 | None:intergenic |
| AAATATGAAGAAGGAGGGAC+AGG | 0.460667 | 1_1:+78635362 | None:intergenic |
| GTTAATGCCACCTGCAAAGA+TGG | 0.461294 | 1_1:-78633931 | Msa0046480:CDS |
| AGAAGGAGGGACAGGTGAGA+GGG | 0.462340 | 1_1:+78635370 | None:intergenic |
| AGGAAAAGGATTTGCGGGGA+GGG | 0.466496 | 1_1:+78635202 | None:intergenic |
| GTCAATGGGACTGGTCCGTT+TGG | 0.467430 | 1_1:-78634697 | Msa0046480:CDS |
| AAGAAGGAGGGACAGGTGAG+AGG | 0.467725 | 1_1:+78635369 | None:intergenic |
| TTCCTCTTCCTCTCCTCCTC+CGG | 0.468287 | 1_1:-78634866 | Msa0046480:CDS |
| GTTTCAGCAAGTAAACCAAT+TGG | 0.469325 | 1_1:+78634952 | None:intergenic |
| TGTATCTGTTGTCTCAAAAG+TGG | 0.473862 | 1_1:-78633734 | Msa0046480:CDS |
| TGCCATACTTCCACCAGGCC+AGG | 0.474712 | 1_1:-78633518 | Msa0046480:intron |
| CGTTGTTGTTGAATCTGATA+AGG | 0.474840 | 1_1:-78635058 | Msa0046480:CDS |
| GCAGTAGAAGAACCACCTTT+AGG | 0.475879 | 1_1:+78634583 | None:intergenic |
| TTTGGAGAGAGTGTCGCCTT+CGG | 0.478453 | 1_1:+78635092 | None:intergenic |
| CGGATGTGGAGGCTGCTGCT+GGG | 0.484662 | 1_1:-78634660 | Msa0046480:CDS |
| TCCTGAGGAGTCGCCGGAGG+AGG | 0.486371 | 1_1:+78634853 | None:intergenic |
| ATTTGCGGGGAGGGGAGGAG+CGG | 0.486564 | 1_1:+78635211 | None:intergenic |
| CAGATAAATTTAGTTCTACC+AGG | 0.488540 | 1_1:-78631184 | Msa0046480:three_prime_UTR |
| GGGGAGGGGAGGAGCGGTGA+GGG | 0.488786 | 1_1:+78635217 | None:intergenic |
| GAGAAGAAATATGAAGAAGG+AGG | 0.490671 | 1_1:+78635356 | None:intergenic |
| GCGGTGAGGGAGGAGGAGAG+TGG | 0.492755 | 1_1:+78635230 | None:intergenic |
| TTCTCAAGAAACAGTGCGCC+TGG | 0.493694 | 1_1:+78631166 | None:intergenic |
| GTTGACATTGCATCAGTCAA+TGG | 0.493986 | 1_1:-78634712 | Msa0046480:CDS |
| GACTTAACCGCCGCCGGTGG+AGG | 0.494592 | 1_1:+78634802 | None:intergenic |
| AAACCAATTGGAGCACCAAC+CGG | 0.494669 | 1_1:+78634964 | None:intergenic |
| ATTTGCTTCGATAAGTTCGT+TGG | 0.499574 | 1_1:-78635462 | Msa0046480:five_prime_UTR |
| AATAATTTATGGAGCTGACT+TGG | 0.504990 | 1_1:-78631280 | Msa0046480:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1_1:-78635122 | Msa0046480:CDS |
| TCCTCCACCACCGCCTCCAC+CGG | 0.509369 | 1_1:-78634815 | Msa0046480:CDS |
| AAATAAGCACTAACCTGGCC+TGG | 0.510203 | 1_1:+78633505 | None:intergenic |
| TTTGGCGAAGGCTGTAGCTA+TGG | 0.511396 | 1_1:-78633974 | Msa0046480:CDS |
| TTGACATTGCATCAGTCAAT+GGG | 0.511963 | 1_1:-78634711 | Msa0046480:CDS |
| CAGAGTGAAAAGTAAAATGC+TGG | 0.512136 | 1_1:-78633323 | Msa0046480:intron |
| GAAGCTTGCAAAGCAGCATA+AGG | 0.516061 | 1_1:-78634734 | Msa0046480:CDS |
| GGTGTCGCTGTGATATTCTT+GGG | 0.516252 | 1_1:+78634766 | None:intergenic |
| AGATTTCACGGATCTTAGCT+TGG | 0.518622 | 1_1:+78635172 | None:intergenic |
| CAAAAGTGGAAAGAACTAGT+TGG | 0.519897 | 1_1:-78633720 | Msa0046480:CDS |
| ATGGGACTGGTCCGTTTGGT+AGG | 0.522274 | 1_1:-78634693 | Msa0046480:CDS |
| TTTGCAAGCTTCTTCGCTTG+AGG | 0.523490 | 1_1:+78634745 | None:intergenic |
| ACCACCGCCTCCACCGGCGG+CGG | 0.527835 | 1_1:-78634809 | Msa0046480:CDS |
| AGAAGAAATATGAAGAAGGA+GGG | 0.528448 | 1_1:+78635357 | None:intergenic |
| CTCGAACCCGGAATCGCAGC+TGG | 0.528731 | 1_1:+78634556 | None:intergenic |
| CAATAGTAACATTAATGTTG+CGG | 0.528854 | 1_1:-78633893 | Msa0046480:CDS |
| AATGAGAAGAAATATGAAGA+AGG | 0.528882 | 1_1:+78635353 | None:intergenic |
| GGAGGGACAGGTGAGAGGGG+CGG | 0.529027 | 1_1:+78635374 | None:intergenic |
| TTTGCTTCGATAAGTTCGTT+GGG | 0.531025 | 1_1:-78635461 | Msa0046480:five_prime_UTR |
| TGCTGTTGCTAAGAATATGA+TGG | 0.531804 | 1_1:-78634506 | Msa0046480:CDS |
| GCTCCCACCGCGCCTAAAGG+TGG | 0.537172 | 1_1:-78634595 | Msa0046480:CDS |
| ACTGTTCTTGCTGATACAGA+TGG | 0.538342 | 1_1:-78633352 | Msa0046480:CDS |
| GTGCAGGCATGAAGATTTCA+CGG | 0.539099 | 1_1:+78635160 | None:intergenic |
| AGGAGTCGCCGGAGGAGGAG+AGG | 0.540356 | 1_1:+78634858 | None:intergenic |
| GAAGGAGGGACAGGTGAGAG+GGG | 0.540945 | 1_1:+78635371 | None:intergenic |
| GCGGTTAAGTCTGTTTCCGA+TGG | 0.542027 | 1_1:-78634790 | Msa0046480:CDS |
| CGACGAAGGCGAAACAGCTC+CGG | 0.544268 | 1_1:-78634983 | Msa0046480:CDS |
| AAGGAAAAGGATTTGCGGGG+AGG | 0.547486 | 1_1:+78635201 | None:intergenic |
| GTGGAAAGAACTAGTTGGAA+AGG | 0.549323 | 1_1:-78633715 | Msa0046480:CDS |
| GACAGGTGAGAGGGGCGGAG+AGG | 0.550389 | 1_1:+78635379 | None:intergenic |
| GAGAGGGGCGGAGAGGACGA+GGG | 0.551562 | 1_1:+78635386 | None:intergenic |
| GCCGCTATCGTTGTCGACGA+AGG | 0.556593 | 1_1:-78634997 | Msa0046480:CDS |
| TATCGCTGAAGCTCAAGCCC+AGG | 0.558264 | 1_1:-78634920 | Msa0046480:CDS |
| TCTTGATGCTTTCTATGAGA+AGG | 0.560121 | 1_1:-78634431 | Msa0046480:intron |
| GGTGATGAGTAATGTAGCTC+CGG | 0.561935 | 1_1:-78634629 | Msa0046480:CDS |
| GAAGTTTCCTGAGGAGTCGC+CGG | 0.562506 | 1_1:+78634847 | None:intergenic |
| GTCATAGTGGAACTGAGTGC+AGG | 0.565894 | 1_1:+78635144 | None:intergenic |
| GATTACTCCGGCGGATGTGG+AGG | 0.566437 | 1_1:-78634671 | Msa0046480:CDS |
| GGATACCCAACACGGAAAGT+AGG | 0.566850 | 1_1:+78634469 | None:intergenic |
| AGTTCGTTGGGCAACAAGGA+AGG | 0.566966 | 1_1:-78635449 | Msa0046480:five_prime_UTR |
| GAACCACCTTTAGGCGCGGT+GGG | 0.571512 | 1_1:+78634592 | None:intergenic |
| TTTAGAGAATGTCTGAAGGA+AGG | 0.571872 | 1_1:+78631254 | None:intergenic |
| TGTGATATTCTTGGGACCAT+CGG | 0.577315 | 1_1:+78634774 | None:intergenic |
| GCAGCAGCCTCCACATCCGC+CGG | 0.578668 | 1_1:+78634664 | None:intergenic |
| TCTGTATCAGCAAGAACAGT+GGG | 0.580486 | 1_1:+78633355 | None:intergenic |
| GTGGGAGCAGGAGTCGCCAC+CGG | 0.583580 | 1_1:+78634610 | None:intergenic |
| ATTGCATCAGTCAATGGGAC+TGG | 0.584574 | 1_1:-78634706 | Msa0046480:CDS |
| GGATTTGACGGATTTAGCCT+GGG | 0.588827 | 1_1:+78634903 | None:intergenic |
| GAGGAGAGTGGTGAATTGAG+GGG | 0.588927 | 1_1:+78635242 | None:intergenic |
| GCCGGAGTAATCCTACCAAA+CGG | 0.596459 | 1_1:+78634682 | None:intergenic |
| GTTCTTGCCATCTTTGCAGG+TGG | 0.598180 | 1_1:+78633924 | None:intergenic |
| CATTAATGTTGCGGTTGCTG+TGG | 0.599216 | 1_1:-78633884 | Msa0046480:CDS |
| GCGGTTGCTGTGGCAATCAA+CGG | 0.599221 | 1_1:-78633874 | Msa0046480:CDS |
| TCCACCACCGCCTCCACCGG+CGG | 0.601506 | 1_1:-78634812 | Msa0046480:CDS |
| TCCGTTTGGTAGGATTACTC+CGG | 0.603724 | 1_1:-78634683 | Msa0046480:CDS |
| CAACTGACTCGTACATCACA+CGG | 0.605059 | 1_1:+78630987 | None:intergenic |
| AGAACCACCTTTAGGCGCGG+TGG | 0.612275 | 1_1:+78634591 | None:intergenic |
| GAAACAGACTTAACCGCCGC+CGG | 0.613417 | 1_1:+78634796 | None:intergenic |
| ACAGACTTAACCGCCGCCGG+TGG | 0.613983 | 1_1:+78634799 | None:intergenic |
| CTCAGTTCCACTATGACCGA+GGG | 0.618720 | 1_1:-78635138 | Msa0046480:CDS |
| GCCTTCGTCGACAACGATAG+CGG | 0.619826 | 1_1:+78634996 | None:intergenic |
| GGAGCTACATTACTCATCAC+CGG | 0.621644 | 1_1:+78634631 | None:intergenic |
| GTCTCTTGGATCAAATCCGA+AGG | 0.623986 | 1_1:-78635108 | Msa0046480:CDS |
| GATAAGTTCGTTGGGCAACA+AGG | 0.626158 | 1_1:-78635453 | Msa0046480:five_prime_UTR |
| TTGAAGGAAAAGGATTTGCG+GGG | 0.626517 | 1_1:+78635198 | None:intergenic |
| GACGTTGAAACTTTCTACGA+CGG | 0.630695 | 1_1:-78635027 | Msa0046480:CDS |
| GTTTCCTGAGGAGTCGCCGG+AGG | 0.633462 | 1_1:+78634850 | None:intergenic |
| ACTCAGTTCCACTATGACCG+AGG | 0.633716 | 1_1:-78635139 | Msa0046480:CDS |
| GATGAGTAATGTAGCTCCGG+TGG | 0.634350 | 1_1:-78634626 | Msa0046480:CDS |
| TTTGATGCCATACTTCCACC+AGG | 0.635423 | 1_1:-78633523 | Msa0046480:CDS |
| GTTTGGTAGGATTACTCCGG+CGG | 0.637694 | 1_1:-78634680 | Msa0046480:CDS |
| GGCTGCTGCTGGGATTACAC+CGG | 0.642960 | 1_1:-78634650 | Msa0046480:CDS |
| GAAGGCGACACTCTCTCCAA+AGG | 0.645069 | 1_1:-78635090 | Msa0046480:CDS |
| GAAGGCGAAACAGCTCCGGT+TGG | 0.650328 | 1_1:-78634979 | Msa0046480:CDS |
| TAAGCACTAACCTGGCCTGG+TGG | 0.654901 | 1_1:+78633508 | None:intergenic |
| ATCTGTATCAGCAAGAACAG+TGG | 0.662950 | 1_1:+78633354 | None:intergenic |
| AAAGCAACATTACTCGAACC+CGG | 0.665722 | 1_1:+78634544 | None:intergenic |
| GGAGACTGAGAAGTTTCCTG+AGG | 0.667713 | 1_1:+78634838 | None:intergenic |
| GTTGCTGTGGCAATCAACGG+TGG | 0.689072 | 1_1:-78633871 | Msa0046480:CDS |
| AGAAGAACCACCTTTAGGCG+CGG | 0.690205 | 1_1:+78634588 | None:intergenic |
| TGATAACTGGATACCCAACA+CGG | 0.715114 | 1_1:+78634461 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTTGATTTTTAAATTT+TGG | - | chr1_1:78631994-78632013 | Msa0046480:intron | 10.0% |
| !! | ACTAAATATTATTATTGTAT+TGG | - | chr1_1:78632032-78632051 | Msa0046480:intron | 10.0% |
| !!! | ATTGTTTAATTTGAAAATTT+AGG | - | chr1_1:78632246-78632265 | Msa0046480:intron | 10.0% |
| !! | TAATTTATAAAATTTGAACA+CGG | + | chr1_1:78634767-78634786 | None:intergenic | 10.0% |
| !! | ATTGAATATTATTGTTGTAT+TGG | - | chr1_1:78632288-78632307 | Msa0046480:intron | 15.0% |
| !!! | AACATTTTCTTAATAGAATA+AGG | - | chr1_1:78633138-78633157 | Msa0046480:intron | 15.0% |
| !!! | TCAGATATAATTTAAAATTC+AGG | + | chr1_1:78633273-78633292 | None:intergenic | 15.0% |
| !!! | AATTTTAAATTATATCTGAG+TGG | - | chr1_1:78633274-78633293 | Msa0046480:intron | 15.0% |
| !! | AATAGTAGATACTTAAATTA+TGG | + | chr1_1:78635440-78635459 | None:intergenic | 15.0% |
| !!! | TGATTTTTAAATTTTGGTGA+TGG | - | chr1_1:78632000-78632019 | Msa0046480:intron | 20.0% |
| !! | TAATTTGAAAATTTAGGTGA+TGG | - | chr1_1:78632252-78632271 | Msa0046480:intron | 20.0% |
| !!! | TTAAACTTGTCATTTATTTC+AGG | - | chr1_1:78632945-78632964 | Msa0046480:intron | 20.0% |
| !!! | TAAACTTGTCATTTATTTCA+GGG | - | chr1_1:78632946-78632965 | Msa0046480:intron | 20.0% |
| !!! | TTTTCTGAAATGTTAACTAT+AGG | - | chr1_1:78633240-78633259 | Msa0046480:intron | 20.0% |
| !!! | TTTCTGAAATGTTAACTATA+GGG | - | chr1_1:78633241-78633260 | Msa0046480:intron | 20.0% |
| !!! | AAGATTAGAAAAAAGCATTA+TGG | + | chr1_1:78633454-78633473 | None:intergenic | 20.0% |
| !! | ATCTTAAAATTCATAAAGTG+CGG | - | chr1_1:78633469-78633488 | Msa0046480:intron | 20.0% |
| !! | TTGAGAAATAGAAAATTCAT+AGG | + | chr1_1:78633495-78633514 | None:intergenic | 20.0% |
| !! | AAGACTTTATTATACAATAG+AGG | + | chr1_1:78633608-78633627 | None:intergenic | 20.0% |
| !! | AACATACTATATTATATGCA+TGG | - | chr1_1:78633830-78633849 | Msa0046480:intron | 20.0% |
| !!! | CATATACTATTTCTTTACTA+TGG | + | chr1_1:78634274-78634293 | None:intergenic | 20.0% |
| !! | CATAGTAAAGAAATAGTATA+TGG | - | chr1_1:78634272-78634291 | Msa0046480:intron | 20.0% |
| !! | ATATCAATCACAATCAAAAT+AGG | - | chr1_1:78634397-78634416 | Msa0046480:intron | 20.0% |
| !! | AAAATCTTATAACTATGCAA+TGG | + | chr1_1:78634481-78634500 | None:intergenic | 20.0% |
| !! | ATCATGATAGATGTATTATT+TGG | - | chr1_1:78634876-78634895 | Msa0046480:CDS | 20.0% |
| !! | TAAGAACAAATGATTTCATA+TGG | + | chr1_1:78634980-78634999 | None:intergenic | 20.0% |
| !! | TGAAGAATAACTATAATGTT+AGG | + | chr1_1:78635144-78635163 | None:intergenic | 20.0% |
| !!! | CAAAAGTTTTAGAAATTCAT+GGG | + | chr1_1:78635288-78635307 | None:intergenic | 20.0% |
| !!! | ACAAAAGTTTTAGAAATTCA+TGG | + | chr1_1:78635289-78635308 | None:intergenic | 20.0% |
| ! | AATGAGAAGAAATATGAAGA+AGG | + | chr1_1:78631002-78631021 | None:intergenic | 25.0% |
| !!! | TCATTTTTTCAAATTACCTC+CGG | - | chr1_1:78632169-78632188 | Msa0046480:intron | 25.0% |
| !! | GATGTTGAATTTTTCTTTTC+AGG | - | chr1_1:78632324-78632343 | Msa0046480:intron | 25.0% |
| ! | CAATAGTAACATTAATGTTG+CGG | - | chr1_1:78632459-78632478 | Msa0046480:intron | 25.0% |
| ! | AAACCTGAATTATACTCATT+TGG | + | chr1_1:78632683-78632702 | None:intergenic | 25.0% |
| !! | AAACTTGTCATTTATTTCAG+GGG | - | chr1_1:78632947-78632966 | Msa0046480:intron | 25.0% |
| ! | AAGTGTATAGATTCTTCAAA+AGG | + | chr1_1:78633907-78633926 | None:intergenic | 25.0% |
| ! | TACATCTAGAAACCATAAAA+TGG | - | chr1_1:78633966-78633985 | Msa0046480:CDS | 25.0% |
| ! | ACATCTAGAAACCATAAAAT+GGG | - | chr1_1:78633967-78633986 | Msa0046480:CDS | 25.0% |
| !!! | TATTGCTTTTATAGTCACAA+TGG | - | chr1_1:78634023-78634042 | Msa0046480:intron | 25.0% |
| !!! | ATTGCTTTTATAGTCACAAT+GGG | - | chr1_1:78634024-78634043 | Msa0046480:intron | 25.0% |
| !! | AAATTTGAAATCTAGCAAAC+TGG | + | chr1_1:78634088-78634107 | None:intergenic | 25.0% |
| !! | CAAAACAAATTTTATCAGAG+AGG | - | chr1_1:78634299-78634318 | Msa0046480:intron | 25.0% |
| ! | ATCATAGATCTATCATACAA+AGG | - | chr1_1:78634355-78634374 | Msa0046480:intron | 25.0% |
| !! | TTTTATTCTTTATGGTTGAG+TGG | + | chr1_1:78634457-78634476 | None:intergenic | 25.0% |
| !!! | GCAATGGATTTTATTCTTTA+TGG | + | chr1_1:78634465-78634484 | None:intergenic | 25.0% |
| ! | ACACTAATTAGAGAAAAAGT+TGG | - | chr1_1:78634618-78634637 | Msa0046480:CDS | 25.0% |
| ! | CACTAATTAGAGAAAAAGTT+GGG | - | chr1_1:78634619-78634638 | Msa0046480:CDS | 25.0% |
| ! | TGCATTTGAATAGGATAAAA+AGG | + | chr1_1:78634733-78634752 | None:intergenic | 25.0% |
| !!! | TAGATGTATTATTTGGCTTT+TGG | - | chr1_1:78634883-78634902 | Msa0046480:CDS | 25.0% |
| ! | TATGGTTCTTATCAAAAACT+GGG | + | chr1_1:78634962-78634981 | None:intergenic | 25.0% |
| ! | ATATGGTTCTTATCAAAAAC+TGG | + | chr1_1:78634963-78634982 | None:intergenic | 25.0% |
| !! | ACTATAATGTTAGGTTTTCT+GGG | + | chr1_1:78635135-78635154 | None:intergenic | 25.0% |
| !! | AACTATAATGTTAGGTTTTC+TGG | + | chr1_1:78635136-78635155 | None:intergenic | 25.0% |
| AGAAGAAATATGAAGAAGGA+GGG | + | chr1_1:78630998-78631017 | None:intergenic | 30.0% | |
| ! | GAGAGAATGTGTATTCATTT+TGG | + | chr1_1:78631053-78631072 | None:intergenic | 30.0% |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | + | chr1_1:78631159-78631178 | None:intergenic | 30.0% |
| !!! | CATTTTTTCAAATTACCTCC+GGG | - | chr1_1:78632170-78632189 | Msa0046480:intron | 30.0% |
| TGTCATCATCTATAAAGCAT+TGG | + | chr1_1:78632227-78632246 | None:intergenic | 30.0% | |
| !! | TTGAAAATTTAGGTGATGGA+TGG | - | chr1_1:78632256-78632275 | Msa0046480:intron | 30.0% |
| CAACCAAATGAGTATAATTC+AGG | - | chr1_1:78632677-78632696 | Msa0046480:intron | 30.0% | |
| ! | GGTTTGTTTATTGTTGTTGT+TGG | - | chr1_1:78632698-78632717 | Msa0046480:intron | 30.0% |
| !! | TGTTACTTGAACGTTTTAAC+CGG | - | chr1_1:78632735-78632754 | Msa0046480:intron | 30.0% |
| AAACAGGCACAATTAATATC+CGG | + | chr1_1:78632757-78632776 | None:intergenic | 30.0% | |
| ATTAGAAATAAGCACTAACC+TGG | + | chr1_1:78632855-78632874 | None:intergenic | 30.0% | |
| ! | TGTTAGTTTGAGAGATTATC+TGG | - | chr1_1:78632884-78632903 | Msa0046480:intron | 30.0% |
| !! | TGGCTTATTTTCTAGCAATT+TGG | - | chr1_1:78632904-78632923 | Msa0046480:intron | 30.0% |
| !!! | TAGCAATTTGGACCTTTTTT+TGG | - | chr1_1:78632916-78632935 | Msa0046480:intron | 30.0% |
| !!! | AGCAATTTGGACCTTTTTTT+GGG | - | chr1_1:78632917-78632936 | Msa0046480:intron | 30.0% |
| ! | AACTTGTCATTTATTTCAGG+GGG | - | chr1_1:78632948-78632967 | Msa0046480:intron | 30.0% |
| TTGAGAAAAATGTACTCATG+TGG | + | chr1_1:78633307-78633326 | None:intergenic | 30.0% | |
| ! | ACATGAGTACATTTTTCTCA+AGG | - | chr1_1:78633306-78633325 | Msa0046480:intron | 30.0% |
| ! | CATGAGTACATTTTTCTCAA+GGG | - | chr1_1:78633307-78633326 | Msa0046480:intron | 30.0% |
| !!! | ATTTTTTTATCACACCTGCA+AGG | - | chr1_1:78633345-78633364 | Msa0046480:CDS | 30.0% |
| ! | TTTCTGCAGAGTTAATTTTC+TGG | - | chr1_1:78633410-78633429 | Msa0046480:intron | 30.0% |
| ! | TATGGTGAATATTTGAGACA+GGG | + | chr1_1:78633436-78633455 | None:intergenic | 30.0% |
| ! | TTATGGTGAATATTTGAGAC+AGG | + | chr1_1:78633437-78633456 | None:intergenic | 30.0% |
| ! | ATTGAAAACTTTGGTTCATC+AGG | + | chr1_1:78633541-78633560 | None:intergenic | 30.0% |
| CTTCTGAACATTGAAAACTT+TGG | + | chr1_1:78633550-78633569 | None:intergenic | 30.0% | |
| ! | CAAAGTTTTCAATGTTCAGA+AGG | - | chr1_1:78633548-78633567 | Msa0046480:CDS | 30.0% |
| CCTATCTCTATAAAGAATAC+AGG | + | chr1_1:78633653-78633672 | None:intergenic | 30.0% | |
| CCTGTATTCTTTATAGAGAT+AGG | - | chr1_1:78633650-78633669 | Msa0046480:intron | 30.0% | |
| TTTATAGAGATAGGTTTCAC+AGG | - | chr1_1:78633659-78633678 | Msa0046480:intron | 30.0% | |
| TCAATCGAACTATCCAAATA+AGG | + | chr1_1:78633687-78633706 | None:intergenic | 30.0% | |
| TGCATCTTAATATACCACAT+AGG | - | chr1_1:78633723-78633742 | Msa0046480:CDS | 30.0% | |
| ACATCCAAGATCAAAAGATA+CGG | + | chr1_1:78634139-78634158 | None:intergenic | 30.0% | |
| TTGGATGTTGAAATACTTAC+TGG | - | chr1_1:78634151-78634170 | Msa0046480:intron | 30.0% | |
| TACTGGACATATCCAATAAA+CGG | - | chr1_1:78634168-78634187 | Msa0046480:intron | 30.0% | |
| ! | CTATTTCTTTACTATGGCTT+AGG | + | chr1_1:78634268-78634287 | None:intergenic | 30.0% |
| CAATCACAATCAAAATAGGA+TGG | - | chr1_1:78634401-78634420 | Msa0046480:intron | 30.0% | |
| TGATCACAATATTCTCATCT+AGG | + | chr1_1:78634565-78634584 | None:intergenic | 30.0% | |
| GAGAATATTGTGATCATGAT+TGG | - | chr1_1:78634569-78634588 | Msa0046480:CDS | 30.0% | |
| ! | TTTTTCCACAACCGAAAATT+CGG | - | chr1_1:78634693-78634712 | Msa0046480:CDS | 30.0% |
| AACCGAAAATTCGGAAAAAA+CGG | - | chr1_1:78634702-78634721 | Msa0046480:CDS | 30.0% | |
| !!! | TATTTGGCTTTTGGTTAATG+TGG | - | chr1_1:78634892-78634911 | Msa0046480:CDS | 30.0% |
| !!! | TGTTCTTATTTTTATTCCGC+AGG | - | chr1_1:78634992-78635011 | Msa0046480:CDS | 30.0% |
| AGTCAGCTCCATAAATTATT+CGG | + | chr1_1:78635072-78635091 | None:intergenic | 30.0% | |
| AATAATTTATGGAGCTGACT+TGG | - | chr1_1:78635072-78635091 | Msa0046480:CDS | 30.0% | |
| !! | TGATTTTAGAGAATGTCTGA+AGG | + | chr1_1:78635105-78635124 | None:intergenic | 30.0% |
| !! | CAGATAAATTTAGTTCTACC+AGG | - | chr1_1:78635168-78635187 | Msa0046480:CDS | 30.0% |
| GGATGATCATTCTAGTATAA+AGG | + | chr1_1:78635347-78635366 | None:intergenic | 30.0% | |
| ATTTGCTTCGATAAGTTCGT+TGG | - | chr1_1:78630890-78630909 | Msa0046480:three_prime_UTR | 35.0% | |
| TTTGCTTCGATAAGTTCGTT+GGG | - | chr1_1:78630891-78630910 | Msa0046480:three_prime_UTR | 35.0% | |
| GAGAAGAAATATGAAGAAGG+AGG | + | chr1_1:78630999-78631018 | None:intergenic | 35.0% | |
| TTTGAAGGAAAAGGATTTGC+GGG | + | chr1_1:78631158-78631177 | None:intergenic | 35.0% | |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | + | chr1_1:78631167-78631186 | None:intergenic | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | + | chr1_1:78631173-78631192 | None:intergenic | 35.0% |
| ! | CGTTGTTGTTGAATCTGATA+AGG | - | chr1_1:78631294-78631313 | Msa0046480:CDS | 35.0% |
| TGAATCTGATAAGGCTGATA+TGG | - | chr1_1:78631303-78631322 | Msa0046480:CDS | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | + | chr1_1:78631403-78631422 | None:intergenic | 35.0% | |
| TTGACATTGCATCAGTCAAT+GGG | - | chr1_1:78631641-78631660 | Msa0046480:intron | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | - | chr1_1:78631846-78631865 | Msa0046480:intron | 35.0% | |
| TCTTGATGCTTTCTATGAGA+AGG | - | chr1_1:78631921-78631940 | Msa0046480:intron | 35.0% | |
| ATTGGCACATACATAGACAT+CGG | + | chr1_1:78632209-78632228 | None:intergenic | 35.0% | |
| !! | AAATTTAGGTGATGGATGGA+TGG | - | chr1_1:78632260-78632279 | Msa0046480:intron | 35.0% |
| !!! | TTCTTTTCAGGTGAAACCTA+AGG | - | chr1_1:78632336-78632355 | Msa0046480:intron | 35.0% |
| !!! | TCTTTTCAGGTGAAACCTAA+GGG | - | chr1_1:78632337-78632356 | Msa0046480:intron | 35.0% |
| TGTATCTGTTGTCTCAAAAG+TGG | - | chr1_1:78632618-78632637 | Msa0046480:intron | 35.0% | |
| CAAAAGTGGAAAGAACTAGT+TGG | - | chr1_1:78632632-78632651 | Msa0046480:intron | 35.0% | |
| ! | TATTGTTGTTGTTGGCTATC+TGG | - | chr1_1:78632706-78632725 | Msa0046480:intron | 35.0% |
| AACTTTCACGCTTTCCAATT+TGG | - | chr1_1:78632786-78632805 | Msa0046480:intron | 35.0% | |
| ACTTTCACGCTTTCCAATTT+GGG | - | chr1_1:78632787-78632806 | Msa0046480:intron | 35.0% | |
| CTTTCCAATTTGGGTATGTT+TGG | - | chr1_1:78632796-78632815 | Msa0046480:intron | 35.0% | |
| AACTCCAAACATACCCAAAT+TGG | + | chr1_1:78632803-78632822 | None:intergenic | 35.0% | |
| !!! | AATTTGGACCTTTTTTTGGG+AGG | - | chr1_1:78632920-78632939 | Msa0046480:intron | 35.0% |
| GTTTAACACCTCCCAAAAAA+AGG | + | chr1_1:78632931-78632950 | None:intergenic | 35.0% | |
| CAGAGTGAAAAGTAAAATGC+TGG | - | chr1_1:78633029-78633048 | Msa0046480:intron | 35.0% | |
| TGTTCGTTTATGTTCTCACT+CGG | + | chr1_1:78633122-78633141 | None:intergenic | 35.0% | |
| CATGATGCAAATGCAATCTA+AGG | + | chr1_1:78633203-78633222 | None:intergenic | 35.0% | |
| AGAGGAATAATGTATGATCC+AGG | + | chr1_1:78633590-78633609 | None:intergenic | 35.0% | |
| ! | ATAGTTCGATTGATTCCTAG+TGG | - | chr1_1:78633694-78633713 | Msa0046480:CDS | 35.0% |
| AACTACAAAATGAGCCTATG+TGG | + | chr1_1:78633740-78633759 | None:intergenic | 35.0% | |
| TATTATATGCATGGACGCAT+AGG | - | chr1_1:78633839-78633858 | Msa0046480:CDS | 35.0% | |
| CTAGAGAAAACTGTGGTTAT+AGG | + | chr1_1:78633866-78633885 | None:intergenic | 35.0% | |
| CAAAACACTAGAGAAAACTG+TGG | + | chr1_1:78633873-78633892 | None:intergenic | 35.0% | |
| AACAAATTGCAAGACTCTGT+TGG | - | chr1_1:78633938-78633957 | Msa0046480:CDS | 35.0% | |
| ! | TTGCAGACATTCCCATTTTA+TGG | + | chr1_1:78633981-78634000 | None:intergenic | 35.0% |
| CATCCAAGATCAAAAGATAC+GGG | + | chr1_1:78634138-78634157 | None:intergenic | 35.0% | |
| !! | TTAGGTTGAAATTGTCTCAC+AGG | + | chr1_1:78634250-78634269 | None:intergenic | 35.0% |
| GAGAGGTGAACATTTAATAC+AGG | - | chr1_1:78634316-78634335 | Msa0046480:intron | 35.0% | |
| ACAAAGGAACATAGAGATAG+AGG | - | chr1_1:78634371-78634390 | Msa0046480:intron | 35.0% | |
| TGTGTATGCAACTGAATGTT+TGG | - | chr1_1:78634507-78634526 | Msa0046480:CDS | 35.0% | |
| AATGTCCTAAATGACTCTAC+TGG | + | chr1_1:78634652-78634671 | None:intergenic | 35.0% | |
| ! | TTTTTCCGAATTTTCGGTTG+TGG | + | chr1_1:78634701-78634720 | None:intergenic | 35.0% |
| !!! | CACCGTTTTTTCCGAATTTT+CGG | + | chr1_1:78634707-78634726 | None:intergenic | 35.0% |
| GTGAAACTGTGCATTTGAAT+AGG | + | chr1_1:78634742-78634761 | None:intergenic | 35.0% | |
| !! | ATGCCTCACTCTGAAATATA+AGG | - | chr1_1:78634804-78634823 | Msa0046480:CDS | 35.0% |
| !! | TGCCTCACTCTGAAATATAA+GGG | - | chr1_1:78634805-78634824 | Msa0046480:CDS | 35.0% |
| TACCCTTATATTTCAGAGTG+AGG | + | chr1_1:78634810-78634829 | None:intergenic | 35.0% | |
| ATCTGAACCAGTATTTGACA+TGG | + | chr1_1:78634930-78634949 | None:intergenic | 35.0% | |
| TTCCGCAGGATCAAATTAAT+TGG | - | chr1_1:78635006-78635025 | Msa0046480:CDS | 35.0% | |
| TCCGCAGGATCAAATTAATT+GGG | - | chr1_1:78635007-78635026 | Msa0046480:CDS | 35.0% | |
| ! | ACCCAATTAATTTGATCCTG+CGG | + | chr1_1:78635011-78635030 | None:intergenic | 35.0% |
| GCTGATCACCGAATAATTTA+TGG | - | chr1_1:78635061-78635080 | Msa0046480:CDS | 35.0% | |
| TTTAGAGAATGTCTGAAGGA+AGG | + | chr1_1:78635101-78635120 | None:intergenic | 35.0% | |
| AAATATGAAGAAGGAGGGAC+AGG | + | chr1_1:78630993-78631012 | None:intergenic | 40.0% | |
| TTGAAGGAAAAGGATTTGCG+GGG | + | chr1_1:78631157-78631176 | None:intergenic | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | + | chr1_1:78631183-78631202 | None:intergenic | 40.0% | |
| AACAACGACACTATCACCTT+TGG | + | chr1_1:78631281-78631300 | None:intergenic | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | - | chr1_1:78631325-78631344 | Msa0046480:intron | 40.0% | |
| ! | AGAAGAAGAAGCGGATTTGA+CGG | + | chr1_1:78631464-78631483 | None:intergenic | 40.0% |
| AGAGGAAGAAGAAGAAGAAG+CGG | + | chr1_1:78631473-78631492 | None:intergenic | 40.0% | |
| TGTGATATTCTTGGGACCAT+CGG | + | chr1_1:78631581-78631600 | None:intergenic | 40.0% | |
| GTTGACATTGCATCAGTCAA+TGG | - | chr1_1:78631640-78631659 | Msa0046480:intron | 40.0% | |
| AAAGCAACATTACTCGAACC+CGG | + | chr1_1:78631811-78631830 | None:intergenic | 40.0% | |
| TGATAACTGGATACCCAACA+CGG | + | chr1_1:78631894-78631913 | None:intergenic | 40.0% | |
| !! | TCAAGAGCATCAGTGATAAC+TGG | + | chr1_1:78631907-78631926 | None:intergenic | 40.0% |
| !! | GCCTCAAATTAGAAGTGTCA+GGG | + | chr1_1:78632104-78632123 | None:intergenic | 40.0% |
| ! | CTTCTAATTTGAGGCGTGTT+TGG | - | chr1_1:78632109-78632128 | Msa0046480:intron | 40.0% |
| !! | TGTGACGATGACTGCTATTT+TGG | - | chr1_1:78632360-78632379 | Msa0046480:intron | 40.0% |
| AAAGTTCTTGCCATCTTTGC+AGG | + | chr1_1:78632434-78632453 | None:intergenic | 40.0% | |
| ! | CTTGATAACTCCAGTTCTTC+AGG | - | chr1_1:78632504-78632523 | Msa0046480:intron | 40.0% |
| TTATCAGCATCCTGAAGAAC+TGG | + | chr1_1:78632517-78632536 | None:intergenic | 40.0% | |
| AGTTCTTCAGGATGCTGATA+AGG | - | chr1_1:78632516-78632535 | Msa0046480:intron | 40.0% | |
| ! | GTTTGTTGCTGTGTTGTAGT+TGG | - | chr1_1:78632592-78632611 | Msa0046480:intron | 40.0% |
| GTGGAAAGAACTAGTTGGAA+AGG | - | chr1_1:78632637-78632656 | Msa0046480:intron | 40.0% | |
| TTTATTTCAGGGGGCTATCA+TGG | - | chr1_1:78632957-78632976 | Msa0046480:intron | 40.0% | |
| TCTGTATCAGCAAGAACAGT+GGG | + | chr1_1:78633000-78633019 | None:intergenic | 40.0% | |
| ATCTGTATCAGCAAGAACAG+TGG | + | chr1_1:78633001-78633020 | None:intergenic | 40.0% | |
| ACTGTTCTTGCTGATACAGA+TGG | - | chr1_1:78633000-78633019 | Msa0046480:intron | 40.0% | |
| GCATGAATGCATAAACAGCA+AGG | + | chr1_1:78633075-78633094 | None:intergenic | 40.0% | |
| TTCGTTTATGTTCTCACTCG+GGG | + | chr1_1:78633120-78633139 | None:intergenic | 40.0% | |
| GTTCGTTTATGTTCTCACTC+GGG | + | chr1_1:78633121-78633140 | None:intergenic | 40.0% | |
| TAAGGTTCTACCTCATACGA+TGG | + | chr1_1:78633185-78633204 | None:intergenic | 40.0% | |
| TCCTGAACATTACTGAAGCA+CGG | + | chr1_1:78633373-78633392 | None:intergenic | 40.0% | |
| GTTCATCAGGTAAGAAGAGA+AGG | + | chr1_1:78633528-78633547 | None:intergenic | 40.0% | |
| GGTTTCACAGGAACCTTATT+TGG | - | chr1_1:78633671-78633690 | Msa0046480:intron | 40.0% | |
| TCCTTGACACAGTAAACGAT+TGG | - | chr1_1:78633782-78633801 | Msa0046480:intron | 40.0% | |
| TCCAATCGTTTACTGTGTCA+AGG | + | chr1_1:78633786-78633805 | None:intergenic | 40.0% | |
| AAATTGCAAGACTCTGTTGG+AGG | - | chr1_1:78633941-78633960 | Msa0046480:CDS | 40.0% | |
| ! | TGTCCCGTATCTTTTGATCT+TGG | - | chr1_1:78634132-78634151 | Msa0046480:intron | 40.0% |
| TGTGCTACGATACCGTTTAT+TGG | + | chr1_1:78634183-78634202 | None:intergenic | 40.0% | |
| AAGGAACATAGAGATAGAGG+AGG | - | chr1_1:78634374-78634393 | Msa0046480:intron | 40.0% | |
| GTATGCAACTGAATGTTTGG+TGG | - | chr1_1:78634510-78634529 | Msa0046480:CDS | 40.0% | |
| ! | TGATCATGATTGGTTACACG+AGG | - | chr1_1:78634579-78634598 | Msa0046480:CDS | 40.0% |
| TTGGTTACACGAGGCAAAAT+AGG | - | chr1_1:78634588-78634607 | Msa0046480:CDS | 40.0% | |
| CGAAAATTCGGAAAAAACGG+TGG | - | chr1_1:78634705-78634724 | Msa0046480:CDS | 40.0% | |
| !! | AGAAGCACCATGTCAAATAC+TGG | - | chr1_1:78634920-78634939 | Msa0046480:CDS | 40.0% |
| ! | GGGTCTAAACTTTCCTTTTC+AGG | - | chr1_1:78635027-78635046 | Msa0046480:CDS | 40.0% |
| GCTGTTACATTCACCTGAAA+AGG | + | chr1_1:78635043-78635062 | None:intergenic | 40.0% | |
| GATAAGTTCGTTGGGCAACA+AGG | - | chr1_1:78630899-78630918 | Msa0046480:three_prime_UTR | 45.0% | |
| GTGCAGGCATGAAGATTTCA+CGG | + | chr1_1:78631195-78631214 | None:intergenic | 45.0% | |
| ! | GATTTTACCCTCGGTCATAG+TGG | + | chr1_1:78631224-78631243 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | + | chr1_1:78631233-78631252 | None:intergenic | 45.0% |
| GTCTCTTGGATCAAATCCGA+AGG | - | chr1_1:78631244-78631263 | Msa0046480:CDS | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | + | chr1_1:78631391-78631410 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | + | chr1_1:78631452-78631471 | None:intergenic | 45.0% |
| !! | GGTGTCGCTGTGATATTCTT+GGG | + | chr1_1:78631589-78631608 | None:intergenic | 45.0% |
| !! | AGGTGTCGCTGTGATATTCT+TGG | + | chr1_1:78631590-78631609 | None:intergenic | 45.0% |
| TTTGCAAGCTTCTTCGCTTG+AGG | + | chr1_1:78631610-78631629 | None:intergenic | 45.0% | |
| GAAGCTTGCAAAGCAGCATA+AGG | - | chr1_1:78631618-78631637 | Msa0046480:intron | 45.0% | |
| ATTGCATCAGTCAATGGGAC+TGG | - | chr1_1:78631646-78631665 | Msa0046480:intron | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | - | chr1_1:78631669-78631688 | Msa0046480:intron | 45.0% | |
| GGAGCTACATTACTCATCAC+CGG | + | chr1_1:78631724-78631743 | None:intergenic | 45.0% | |
| GGTGATGAGTAATGTAGCTC+CGG | - | chr1_1:78631723-78631742 | Msa0046480:intron | 45.0% | |
| GCAGTAGAAGAACCACCTTT+AGG | + | chr1_1:78631772-78631791 | None:intergenic | 45.0% | |
| TCTGTTCCTACTTTCCGTGT+TGG | - | chr1_1:78631877-78631896 | Msa0046480:intron | 45.0% | |
| CTGTTCCTACTTTCCGTGTT+GGG | - | chr1_1:78631878-78631897 | Msa0046480:intron | 45.0% | |
| GCCCTGACACTTCTAATTTG+AGG | - | chr1_1:78632100-78632119 | Msa0046480:intron | 45.0% | |
| !! | CGCCTCAAATTAGAAGTGTC+AGG | + | chr1_1:78632105-78632124 | None:intergenic | 45.0% |
| !!! | GATGACTGCTATTTTGGCGA+AGG | - | chr1_1:78632366-78632385 | Msa0046480:intron | 45.0% |
| TTGCAGGTGGCATTAACAAC+TGG | + | chr1_1:78632418-78632437 | None:intergenic | 45.0% | |
| GTTAATGCCACCTGCAAAGA+TGG | - | chr1_1:78632421-78632440 | Msa0046480:intron | 45.0% | |
| CATTAATGTTGCGGTTGCTG+TGG | - | chr1_1:78632468-78632487 | Msa0046480:intron | 45.0% | |
| TTTGATGCCATACTTCCACC+AGG | - | chr1_1:78632829-78632848 | Msa0046480:intron | 45.0% | |
| AAATAAGCACTAACCTGGCC+TGG | + | chr1_1:78632850-78632869 | None:intergenic | 45.0% | |
| CAGAAGGCTTCTTTCGTAAC+TGG | - | chr1_1:78633564-78633583 | Msa0046480:CDS | 45.0% | |
| ! | CGATTGATTCCTAGTGGCTA+AGG | - | chr1_1:78633700-78633719 | Msa0046480:CDS | 45.0% |
| TAAGATGCACCTTAGCCACT+AGG | + | chr1_1:78633712-78633731 | None:intergenic | 45.0% | |
| AGCCTCCAGTAGAGTCATTT+AGG | - | chr1_1:78634644-78634663 | Msa0046480:CDS | 45.0% | |
| GTCCTAAATGACTCTACTGG+AGG | + | chr1_1:78634649-78634668 | None:intergenic | 45.0% | |
| !! | CAACTGACTCGTACATCACA+CGG | + | chr1_1:78635368-78635387 | None:intergenic | 45.0% |
| AGTTCGTTGGGCAACAAGGA+AGG | - | chr1_1:78630903-78630922 | Msa0046480:three_prime_UTR | 50.0% | |
| GAGGAGAGTGGTGAATTGAG+GGG | + | chr1_1:78631113-78631132 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | + | chr1_1:78631114-78631133 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | + | chr1_1:78631115-78631134 | None:intergenic | 50.0% | |
| AGGAAAAGGATTTGCGGGGA+GGG | + | chr1_1:78631153-78631172 | None:intergenic | 50.0% | |
| AAGGAAAAGGATTTGCGGGG+AGG | + | chr1_1:78631154-78631173 | None:intergenic | 50.0% | |
| ! | GTCATAGTGGAACTGAGTGC+AGG | + | chr1_1:78631211-78631230 | None:intergenic | 50.0% |
| ACTCAGTTCCACTATGACCG+AGG | - | chr1_1:78631213-78631232 | Msa0046480:exon | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | - | chr1_1:78631214-78631233 | Msa0046480:exon | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | - | chr1_1:78631230-78631249 | Msa0046480:CDS | 50.0% | |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | + | chr1_1:78631263-78631282 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | + | chr1_1:78631453-78631472 | None:intergenic | 50.0% |
| GGAGACTGAGAAGTTTCCTG+AGG | + | chr1_1:78631517-78631536 | None:intergenic | 50.0% | |
| GCGGTTAAGTCTGTTTCCGA+TGG | - | chr1_1:78631562-78631581 | Msa0046480:intron | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | + | chr1_1:78631673-78631692 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | - | chr1_1:78631672-78631691 | Msa0046480:intron | 50.0% | |
| GATGAGTAATGTAGCTCCGG+TGG | - | chr1_1:78631726-78631745 | Msa0046480:intron | 50.0% | |
| AGAAGAACCACCTTTAGGCG+CGG | + | chr1_1:78631767-78631786 | None:intergenic | 50.0% | |
| GGATACCCAACACGGAAAGT+AGG | + | chr1_1:78631886-78631905 | None:intergenic | 50.0% | |
| TTTGGCGAAGGCTGTAGCTA+TGG | - | chr1_1:78632378-78632397 | Msa0046480:intron | 50.0% | |
| GTTCTTGCCATCTTTGCAGG+TGG | + | chr1_1:78632431-78632450 | None:intergenic | 50.0% | |
| AATTGTGCCTGTTTGCCTGC+AGG | - | chr1_1:78632763-78632782 | Msa0046480:intron | 50.0% | |
| GAAAGTTCCTGCAGGCAAAC+AGG | + | chr1_1:78632773-78632792 | None:intergenic | 50.0% | |
| ! | GAAAGCGTGAAAGTTCCTGC+AGG | + | chr1_1:78632781-78632800 | None:intergenic | 50.0% |
| GCCGTGCTTCAGTAATGTTC+AGG | - | chr1_1:78633369-78633388 | Msa0046480:CDS | 50.0% | |
| ! | AGTGAGGCATCATGCATGTG+AGG | + | chr1_1:78634794-78634813 | None:intergenic | 50.0% |
| TTCTCAAGAAACAGTGCGCC+TGG | + | chr1_1:78635189-78635208 | None:intergenic | 50.0% | |
| AGAAGGAGGGACAGGTGAGA+GGG | + | chr1_1:78630985-78631004 | None:intergenic | 55.0% | |
| AAGAAGGAGGGACAGGTGAG+AGG | + | chr1_1:78630986-78631005 | None:intergenic | 55.0% | |
| GGAAAAGGATTTGCGGGGAG+GGG | + | chr1_1:78631152-78631171 | None:intergenic | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | - | chr1_1:78631262-78631281 | Msa0046480:CDS | 55.0% | |
| GCCTTCGTCGACAACGATAG+CGG | + | chr1_1:78631359-78631378 | None:intergenic | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | - | chr1_1:78631432-78631451 | Msa0046480:intron | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | - | chr1_1:78631486-78631505 | Msa0046480:intron | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | + | chr1_1:78631508-78631527 | None:intergenic | 55.0% | |
| GAAACAGACTTAACCGCCGC+CGG | + | chr1_1:78631559-78631578 | None:intergenic | 55.0% | |
| !! | GTCAATGGGACTGGTCCGTT+TGG | - | chr1_1:78631655-78631674 | Msa0046480:intron | 55.0% |
| !! | ATGGGACTGGTCCGTTTGGT+AGG | - | chr1_1:78631659-78631678 | Msa0046480:intron | 55.0% |
| TAGGATTACTCCGGCGGATG+TGG | - | chr1_1:78631678-78631697 | Msa0046480:intron | 55.0% | |
| ATCGGACACACGTCAACACC+CGG | + | chr1_1:78632191-78632210 | None:intergenic | 55.0% | |
| GCAGTCATCGTCACACCCTT+AGG | + | chr1_1:78632355-78632374 | None:intergenic | 55.0% | |
| GCGGTTGCTGTGGCAATCAA+CGG | - | chr1_1:78632478-78632497 | Msa0046480:intron | 55.0% | |
| GTTGCTGTGGCAATCAACGG+TGG | - | chr1_1:78632481-78632500 | Msa0046480:intron | 55.0% | |
| AACCTGGCCTGGTGGAAGTA+TGG | + | chr1_1:78632839-78632858 | None:intergenic | 55.0% | |
| TAAGCACTAACCTGGCCTGG+TGG | + | chr1_1:78632847-78632866 | None:intergenic | 55.0% | |
| TACCTCATACGATGGCCGCA+GGG | + | chr1_1:78633177-78633196 | None:intergenic | 55.0% | |
| GGCTTCTTTCGTAACTGGCC+TGG | - | chr1_1:78633569-78633588 | Msa0046480:CDS | 55.0% | |
| GAAGGAGGGACAGGTGAGAG+GGG | + | chr1_1:78630984-78631003 | None:intergenic | 60.0% | |
| AAAGGATTTGCGGGGAGGGG+AGG | + | chr1_1:78631149-78631168 | None:intergenic | 60.0% | |
| GCCGCTATCGTTGTCGACGA+AGG | - | chr1_1:78631355-78631374 | Msa0046480:intron | 60.0% | |
| CGACGAAGGCGAAACAGCTC+CGG | - | chr1_1:78631369-78631388 | Msa0046480:intron | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | - | chr1_1:78631373-78631392 | Msa0046480:intron | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | - | chr1_1:78631385-78631404 | Msa0046480:intron | 60.0% |
| GATTACTCCGGCGGATGTGG+AGG | - | chr1_1:78631681-78631700 | Msa0046480:intron | 60.0% | |
| GGCTGCTGCTGGGATTACAC+CGG | - | chr1_1:78631702-78631721 | Msa0046480:intron | 60.0% | |
| GAACCACCTTTAGGCGCGGT+GGG | + | chr1_1:78631763-78631782 | None:intergenic | 60.0% | |
| AGAACCACCTTTAGGCGCGG+TGG | + | chr1_1:78631764-78631783 | None:intergenic | 60.0% | |
| TGCTGCACCAGCTGCGATTC+CGG | - | chr1_1:78631789-78631808 | Msa0046480:intron | 60.0% | |
| TGCCATACTTCCACCAGGCC+AGG | - | chr1_1:78632834-78632853 | Msa0046480:intron | 60.0% | |
| CAGGGGGCTATCATGGCTGT+TGG | - | chr1_1:78632964-78632983 | Msa0046480:intron | 60.0% | |
| GGCCTTCTGTCATAGCCCTG+CGG | - | chr1_1:78633159-78633178 | Msa0046480:intron | 60.0% | |
| CTACCTCATACGATGGCCGC+AGG | + | chr1_1:78633178-78633197 | None:intergenic | 60.0% | |
| ACTGAAGCACGGCACCTTGC+AGG | + | chr1_1:78633362-78633381 | None:intergenic | 60.0% | |
| ATTTGCGGGGAGGGGAGGAG+CGG | + | chr1_1:78631144-78631163 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | + | chr1_1:78631505-78631524 | None:intergenic | 65.0% | |
| ACAGACTTAACCGCCGCCGG+TGG | + | chr1_1:78631556-78631575 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | - | chr1_1:78631692-78631711 | Msa0046480:intron | 65.0% | |
| GCTGCACCAGCTGCGATTCC+GGG | - | chr1_1:78631790-78631809 | Msa0046480:intron | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | + | chr1_1:78631799-78631818 | None:intergenic | 65.0% | |
| GGACACACGTCAACACCCGG+AGG | + | chr1_1:78632188-78632207 | None:intergenic | 65.0% | |
| GGCCGCAGGGCTATGACAGA+AGG | + | chr1_1:78633164-78633183 | None:intergenic | 65.0% | |
| AGCCCTGCGGCCATCGTATG+AGG | - | chr1_1:78633172-78633191 | Msa0046480:intron | 65.0% | |
| GAGAGGGGCGGAGAGGACGA+GGG | + | chr1_1:78630969-78630988 | None:intergenic | 70.0% | |
| TGAGAGGGGCGGAGAGGACG+AGG | + | chr1_1:78630970-78630989 | None:intergenic | 70.0% | |
| GACAGGTGAGAGGGGCGGAG+AGG | + | chr1_1:78630976-78630995 | None:intergenic | 70.0% | |
| GGAGGGACAGGTGAGAGGGG+CGG | + | chr1_1:78630981-78631000 | None:intergenic | 70.0% | |
| GCGGTGAGGGAGGAGGAGAG+TGG | + | chr1_1:78631125-78631144 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | + | chr1_1:78631491-78631510 | None:intergenic | 70.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | + | chr1_1:78631497-78631516 | None:intergenic | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | - | chr1_1:78631498-78631517 | Msa0046480:intron | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | + | chr1_1:78631502-78631521 | None:intergenic | 70.0% | |
| TCCTCCACCACCGCCTCCAC+CGG | - | chr1_1:78631537-78631556 | Msa0046480:intron | 70.0% | |
| TTAACCGCCGCCGGTGGAGG+CGG | + | chr1_1:78631550-78631569 | None:intergenic | 70.0% | |
| GACTTAACCGCCGCCGGTGG+AGG | + | chr1_1:78631553-78631572 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | + | chr1_1:78631691-78631710 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | - | chr1_1:78631691-78631710 | Msa0046480:intron | 70.0% | |
| GTGGGAGCAGGAGTCGCCAC+CGG | + | chr1_1:78631745-78631764 | None:intergenic | 70.0% | |
| CCTTTAGGCGCGGTGGGAGC+AGG | + | chr1_1:78631757-78631776 | None:intergenic | 70.0% | |
| CCTGCTCCCACCGCGCCTAA+AGG | - | chr1_1:78631754-78631773 | Msa0046480:intron | 70.0% | |
| GCTCCCACCGCGCCTAAAGG+TGG | - | chr1_1:78631757-78631776 | Msa0046480:intron | 70.0% | |
| GGGAGGAGCGGTGAGGGAGG+AGG | + | chr1_1:78631132-78631151 | None:intergenic | 75.0% | |
| GAGGGGAGGAGCGGTGAGGG+AGG | + | chr1_1:78631135-78631154 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGAGCGGTGA+GGG | + | chr1_1:78631138-78631157 | None:intergenic | 75.0% | |
| !! | GGTGGAGGCGGTGGTGGAGG+AGG | + | chr1_1:78631538-78631557 | None:intergenic | 75.0% |
| TCCACCACCGCCTCCACCGG+CGG | - | chr1_1:78631540-78631559 | Msa0046480:intron | 75.0% | |
| ! | CGGGGAGGGGAGGAGCGGTG+AGG | + | chr1_1:78631139-78631158 | None:intergenic | 80.0% |
| !! | GCCGGTGGAGGCGGTGGTGG+AGG | + | chr1_1:78631541-78631560 | None:intergenic | 80.0% |
| ! | ACCACCGCCTCCACCGGCGG+CGG | - | chr1_1:78631543-78631562 | Msa0046480:intron | 80.0% |
| ! | GCCGCCGGTGGAGGCGGTGG+TGG | + | chr1_1:78631544-78631563 | None:intergenic | 85.0% |
| ! | ACCGCCGCCGGTGGAGGCGG+TGG | + | chr1_1:78631547-78631566 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 78630885 | 78635489 | 78630885 | ID=Msa0046480;Name=Msa0046480 |
| chr1_1 | mRNA | 78630885 | 78635489 | 78630885 | ID=Msa0046480-mRNA-1;Parent=Msa0046480;Name=Msa0046480-mRNA-1;_AED=0.07;_eAED=0.07;_QI=170|1|1|1|1|1|6|336|475 |
| chr1_1 | exon | 78630885 | 78631325 | 78630885 | ID=Msa0046480-mRNA-1:exon:27083;Parent=Msa0046480-mRNA-1 |
| chr1_1 | exon | 78633324 | 78633407 | 78633324 | ID=Msa0046480-mRNA-1:exon:27082;Parent=Msa0046480-mRNA-1 |
| chr1_1 | exon | 78633519 | 78633589 | 78633519 | ID=Msa0046480-mRNA-1:exon:27081;Parent=Msa0046480-mRNA-1 |
| chr1_1 | exon | 78633676 | 78633763 | 78633676 | ID=Msa0046480-mRNA-1:exon:27080;Parent=Msa0046480-mRNA-1 |
| chr1_1 | exon | 78633837 | 78634028 | 78633837 | ID=Msa0046480-mRNA-1:exon:27079;Parent=Msa0046480-mRNA-1 |
| chr1_1 | exon | 78634432 | 78635489 | 78634432 | ID=Msa0046480-mRNA-1:exon:27078;Parent=Msa0046480-mRNA-1 |
| chr1_1 | five_prime_UTR | 78635320 | 78635489 | 78635320 | ID=Msa0046480-mRNA-1:five_prime_utr;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78634432 | 78635319 | 78634432 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78633837 | 78634028 | 78633837 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78633676 | 78633763 | 78633676 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78633519 | 78633589 | 78633519 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78633324 | 78633407 | 78633324 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | CDS | 78631221 | 78631325 | 78631221 | ID=Msa0046480-mRNA-1:cds;Parent=Msa0046480-mRNA-1 |
| chr1_1 | three_prime_UTR | 78630885 | 78631220 | 78630885 | ID=Msa0046480-mRNA-1:three_prime_utr;Parent=Msa0046480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
