AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0054540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0054540 MtrunA17_Chr1g0156101 88.866 494 55 0 21 514 21 514 0.0 922
Msa0054540 MtrunA17_Chr1g0156081 88.641 493 56 0 22 514 46 538 0.0 880
Msa0054540 MtrunA17_Chr4g0011961 50.787 508 229 5 3 510 7 493 1.51e-180 516
Msa0054540 MtrunA17_Chr1g0156061 92.446 278 21 0 236 513 192 469 4.49e-177 506
Msa0054540 MtrunA17_Chr1g0156061 92.617 149 11 0 21 169 44 192 2.96e-94 294
Msa0054540 MtrunA17_Chr5g0431511 50.520 481 225 5 33 512 34 502 3.84e-175 503
Msa0054540 MtrunA17_Chr7g0218601 48.394 498 241 7 14 510 15 497 5.87e-174 499
Msa0054540 MtrunA17_Chr4g0011921 50.884 509 229 7 3 510 6 494 7.50e-174 499
Msa0054540 MtrunA17_Chr5g0431501 51.143 481 222 5 33 512 34 502 4.63e-173 497
Msa0054540 MtrunA17_Chr5g0431461 51.143 481 222 5 33 512 34 502 4.63e-173 497
Msa0054540 MtrunA17_Chr7g0218611 49.592 490 234 5 21 510 22 498 7.48e-172 494
Msa0054540 MtrunA17_Chr4g0011901 50.413 484 227 4 27 510 24 494 1.00e-168 486
Msa0054540 MtrunA17_Chr5g0419691 50.418 478 224 5 33 510 30 494 2.58e-167 482
Msa0054540 MtrunA17_Chr4g0011871 50.209 478 226 5 33 510 30 495 1.18e-165 478
Msa0054540 MtrunA17_Chr4g0011881 50.837 478 221 4 33 510 31 494 1.20e-165 478
Msa0054540 MtrunA17_Chr5g0406651 51.674 478 218 4 33 510 31 495 6.14e-163 471
Msa0054540 MtrunA17_Chr4g0011981 48.871 487 236 4 24 510 21 494 9.72e-162 468
Msa0054540 MtrunA17_Chr3g0116681 42.240 509 271 9 3 510 15 501 3.07e-145 426
Msa0054540 MtrunA17_Chr3g0101691 43.555 512 262 9 7 509 9 502 1.04e-141 417
Msa0054540 MtrunA17_Chr3g0101601 43.444 511 255 9 13 514 14 499 2.71e-141 416
Msa0054540 MtrunA17_Chr5g0445461 41.165 515 280 7 2 514 9 502 1.13e-140 414
Msa0054540 MtrunA17_Chr3g0101731 41.051 514 282 7 1 509 1 498 1.96e-139 412
Msa0054540 MtrunA17_Chr5g0431641 41.051 514 274 10 6 514 13 502 1.28e-138 409
Msa0054540 MtrunA17_Chr3g0101711 41.553 515 274 8 10 514 9 506 1.75e-138 409
Msa0054540 MtrunA17_Chr3g0116741 43.110 508 267 6 5 509 25 513 2.45e-138 409
Msa0054540 MtrunA17_Chr3g0101621 42.330 515 265 8 6 514 5 493 2.56e-137 405
Msa0054540 MtrunA17_Chr5g0445441 41.779 517 272 10 2 513 50 542 3.10e-137 407
Msa0054540 MtrunA17_Chr3g0101631 42.248 516 263 9 4 509 3 493 4.16e-137 405
Msa0054540 MtrunA17_Chr8g0361471 40.705 511 279 8 6 509 5 498 1.95e-136 404
Msa0054540 MtrunA17_Chr3g0101721 41.352 503 273 7 13 509 14 500 3.62e-136 403
Msa0054540 MtrunA17_Chr5g0445451 40.661 514 282 8 2 513 9 501 5.85e-136 402
Msa0054540 MtrunA17_Chr4g0058281 40.711 506 282 5 7 509 21 511 1.10e-135 402
Msa0054540 MtrunA17_Chr5g0431671 41.393 488 257 9 33 514 39 503 3.24e-135 400
Msa0054540 MtrunA17_Chr3g0101671 41.980 505 269 9 13 509 14 502 5.42e-135 400
Msa0054540 MtrunA17_Chr6g0466331 39.530 511 285 8 6 509 5 498 3.28e-134 398
Msa0054540 MtrunA17_Chr6g0465511 39.726 511 284 8 6 509 5 498 7.00e-134 397
Msa0054540 MtrunA17_Chr4g0058261 42.191 493 269 5 20 509 51 530 1.10e-133 398
Msa0054540 MtrunA17_Chr3g0101651 43.064 483 256 6 30 509 36 502 1.15e-133 397
Msa0054540 MtrunA17_Chr3g0101581 38.716 514 295 7 1 509 1 499 1.86e-133 396
Msa0054540 MtrunA17_Chr1g0162811 39.804 510 284 8 3 509 8 497 3.37e-133 395
Msa0054540 MtrunA17_Chr5g0403331 41.393 517 279 7 1 509 1 501 3.96e-133 395
Msa0054540 MtrunA17_Chr6g0472311 39.648 512 288 5 3 505 11 510 5.31e-133 395
Msa0054540 MtrunA17_Chr4g0020041 40.472 509 284 5 3 509 8 499 6.59e-133 395
Msa0054540 MtrunA17_Chr1g0162801 42.661 511 271 8 3 509 8 500 1.48e-132 394
Msa0054540 MtrunA17_Chr4g0058191 40.873 504 273 6 3 505 2 481 2.06e-132 393
Msa0054540 MtrunA17_Chr3g0101661 41.257 509 277 7 7 509 9 501 2.37e-132 394
Msa0054540 MtrunA17_Chr3g0101701 42.946 482 256 6 31 509 37 502 3.16e-132 393
Msa0054540 MtrunA17_Chr1g0167321 43.615 509 267 6 4 509 6 497 9.48e-132 392
Msa0054540 MtrunA17_Chr4g0047661 40.234 512 288 7 4 511 19 516 1.36e-131 392
Msa0054540 MtrunA17_Chr5g0445381 41.473 516 272 10 4 513 41 532 2.48e-131 392
Msa0054540 MtrunA17_Chr3g0101571 37.791 516 302 5 1 514 3 501 2.66e-131 390
Msa0054540 MtrunA17_Chr4g0058231 41.400 500 268 7 13 505 10 491 3.85e-131 390
Msa0054540 MtrunA17_Chr4g0058201 41.164 481 268 4 25 505 21 486 1.02e-130 389
Msa0054540 MtrunA17_Chr4g0047631 40.519 501 278 6 4 502 20 502 3.52e-130 388
Msa0054540 MtrunA17_Chr4g0024771 38.552 511 291 7 6 514 13 502 7.87e-130 387
Msa0054540 MtrunA17_Chr3g0101611 41.079 482 265 6 30 509 36 500 1.96e-129 386
Msa0054540 MtrunA17_Chr5g0446161 39.189 518 286 9 3 514 8 502 3.47e-129 385
Msa0054540 MtrunA17_Chr5g0445531 40.580 483 266 7 33 514 39 501 6.86e-129 384
Msa0054540 MtrunA17_Chr5g0403351 40.039 512 282 8 7 509 5 500 4.30e-128 382
Msa0054540 MtrunA17_Chr5g0403321 41.856 485 258 7 33 509 35 503 1.04e-127 382
Msa0054540 MtrunA17_Chr3g0101801 39.923 521 288 8 1 514 8 510 1.09e-127 382
Msa0054540 MtrunA17_Chr4g0076161 41.973 517 269 11 2 509 6 500 4.56e-127 380
Msa0054540 MtrunA17_Chr3g0101821 39.961 518 282 8 1 509 1 498 4.84e-126 377
Msa0054540 MtrunA17_Chr4g0047641 39.726 511 286 7 9 511 19 515 1.31e-125 377
Msa0054540 MtrunA17_Chr3g0101811 38.752 529 288 8 1 509 1 513 2.53e-125 376
Msa0054540 MtrunA17_Chr5g0445421 40.467 514 262 9 2 513 83 554 2.58e-124 374
Msa0054540 MtrunA17_Chr6g0463801 40.657 487 267 5 24 509 29 494 6.45e-124 372
Msa0054540 MtrunA17_Chr3g0101751 39.922 516 281 8 1 507 8 503 1.23e-123 371
Msa0054540 MtrunA17_Chr4g0047691 38.748 511 288 5 9 511 21 514 1.37e-123 372
Msa0054540 MtrunA17_Chr6g0463791 40.777 515 276 9 3 511 7 498 2.88e-123 370
Msa0054540 MtrunA17_Chr5g0446151 38.200 500 281 8 20 514 27 503 7.42e-123 369
Msa0054540 MtrunA17_Chr3g0101761 39.648 512 288 7 1 507 1 496 1.30e-122 369
Msa0054540 MtrunA17_Chr3g0101831 39.335 511 289 6 4 509 5 499 2.12e-122 368
Msa0054540 MtrunA17_Chr8g0357421 41.851 497 265 8 22 514 27 503 1.42e-121 366
Msa0054540 MtrunA17_Chr8g0357431 40.688 494 276 4 22 514 27 504 1.15e-119 361
Msa0054540 MtrunA17_Chr5g0430081 40.741 486 263 7 33 512 36 502 6.55e-117 354
Msa0054540 MtrunA17_Chr6g0484841 40.695 489 263 9 32 513 37 505 2.66e-116 352
Msa0054540 MtrunA17_Chr5g0430101 39.038 520 283 10 1 512 8 501 1.21e-115 350
Msa0054540 MtrunA17_Chr2g0310381 36.614 508 307 6 5 512 1 493 4.12e-115 349
Msa0054540 MtrunA17_Chr5g0430131 39.539 521 277 12 5 512 8 503 6.20e-115 349
Msa0054540 MtrunA17_Chr2g0310391 36.220 508 309 6 5 512 1 493 8.21e-115 348
Msa0054540 MtrunA17_Chr8g0382901 36.832 505 286 5 5 509 1 472 7.11e-113 356
Msa0054540 MtrunA17_Chr8g0382901 38.066 486 281 7 28 512 488 954 2.26e-112 355
Msa0054540 MtrunA17_Chr6g0484811 37.891 512 288 8 14 512 11 505 2.58e-112 342
Msa0054540 MtrunA17_Chr5g0430031 38.716 483 277 6 33 512 38 504 4.82e-112 342
Msa0054540 MtrunA17_Chr2g0280261 39.634 492 269 5 22 509 24 491 9.56e-112 340
Msa0054540 MtrunA17_Chr3g0086651 38.878 517 294 9 3 512 5 506 1.77e-111 340
Msa0054540 MtrunA17_Chr8g0390881 37.864 515 295 11 5 512 8 504 2.54e-111 340
Msa0054540 MtrunA17_Chr3g0086661 39.072 517 293 9 3 512 5 506 5.68e-111 339
Msa0054540 MtrunA17_Chr3g0101741 38.255 447 254 5 68 514 1 425 3.07e-110 334
Msa0054540 MtrunA17_Chr5g0430091 37.965 511 294 7 9 512 10 504 6.99e-110 336
Msa0054540 MtrunA17_Chr8g0344151 36.250 480 294 6 33 512 37 504 1.14e-109 335
Msa0054540 MtrunA17_Chr3g0086691 38.523 501 291 8 18 510 15 506 3.35e-109 334
Msa0054540 MtrunA17_Chr4g0061381 37.317 477 281 8 41 512 40 503 1.54e-106 327
Msa0054540 MtrunA17_Chr8g0344191 34.381 509 321 8 7 514 44 540 4.07e-106 327
Msa0054540 MtrunA17_Chr4g0035921 37.008 508 286 11 20 512 25 513 3.38e-105 324
Msa0054540 MtrunA17_Chr8g0344181 36.232 483 294 7 33 514 39 508 3.43e-105 324
Msa0054540 MtrunA17_Chr3g0084921 36.276 521 303 12 3 512 8 510 5.87e-105 323
Msa0054540 MtrunA17_Chr5g0405001 37.044 521 292 11 3 512 18 513 1.39e-104 322
Msa0054540 MtrunA17_Chr8g0372251 38.632 497 273 10 27 512 30 505 2.30e-104 322
Msa0054540 MtrunA17_Chr8g0356001 36.471 510 307 9 3 511 12 505 2.09e-103 319
Msa0054540 MtrunA17_Chr3g0094231 34.497 487 294 9 29 510 33 499 5.88e-102 315
Msa0054540 MtrunA17_Chr1g0174461 35.391 486 293 6 1 479 4 475 1.10e-101 315
Msa0054540 MtrunA17_Chr4g0030701 34.413 494 298 8 33 512 36 517 3.18e-101 314
Msa0054540 MtrunA17_Chr3g0094171 34.436 514 306 10 6 512 18 507 2.08e-100 311
Msa0054540 MtrunA17_Chr1g0174471 34.747 495 303 7 23 512 41 520 6.52e-100 311
Msa0054540 MtrunA17_Chr1g0174451 34.504 484 296 7 6 479 4 476 3.08e-99 308
Msa0054540 MtrunA17_Chr1g0174481 34.510 510 315 8 5 512 7 499 6.63e-99 307
Msa0054540 MtrunA17_Chr1g0174441 33.973 521 318 10 1 512 23 526 1.79e-98 307
Msa0054540 MtrunA17_Chr5g0395331 35.366 492 286 9 30 511 35 504 6.02e-97 302
Msa0054540 MtrunA17_Chr7g0258221 34.496 516 316 8 2 512 6 504 8.53e-97 302
Msa0054540 MtrunA17_Chr7g0235551 34.356 489 298 8 2 482 6 479 5.48e-95 298
Msa0054540 MtrunA17_Chr1g0160851 33.598 503 314 7 12 511 11 496 4.04e-93 292
Msa0054540 MtrunA17_Chr5g0395321 33.652 523 294 10 3 511 14 497 9.90e-92 290
Msa0054540 MtrunA17_Chr7g0255531 31.862 521 320 11 3 514 4 498 1.16e-91 289
Msa0054540 MtrunA17_Chr4g0057001 34.269 499 310 8 14 512 33 513 3.05e-91 288
Msa0054540 MtrunA17_Chr7g0224551 32.700 526 315 12 5 512 4 508 5.88e-91 287
Msa0054540 MtrunA17_Chr8g0355961 35.673 513 312 9 1 511 9 505 7.43e-91 286
Msa0054540 MtrunA17_Chr1g0205361 34.161 483 289 7 33 509 35 494 8.74e-91 286
Msa0054540 MtrunA17_Chr1g0207841 32.505 483 301 8 43 512 49 519 9.14e-91 287
Msa0054540 MtrunA17_Chr7g0258211 35.306 490 292 8 3 482 9 483 1.54e-90 286
Msa0054540 MtrunA17_Chr7g0224561 32.700 526 315 12 5 512 4 508 1.84e-90 286
Msa0054540 MtrunA17_Chr5g0430111 40.796 402 220 6 33 431 38 424 2.98e-90 283
Msa0054540 MtrunA17_Chr6g0451751 33.196 485 301 10 5 476 16 490 2.18e-89 283
Msa0054540 MtrunA17_Chr8g0362701 32.983 476 296 7 43 512 46 504 2.46e-89 283
Msa0054540 MtrunA17_Chr5g0395381 34.043 517 275 11 3 511 14 472 2.46e-89 281
Msa0054540 MtrunA17_Chr4g0030711 32.033 487 300 9 43 512 48 520 4.16e-89 283
Msa0054540 MtrunA17_Chr6g0466901 35.185 486 291 9 5 476 8 483 1.42e-88 281
Msa0054540 MtrunA17_Chr1g0164211 34.167 480 297 10 33 511 32 493 4.83e-88 279
Msa0054540 MtrunA17_Chr8g0362481 33.554 453 275 6 68 512 1 435 1.29e-87 276
Msa0054540 MtrunA17_Chr8g0339331 35.551 481 295 8 33 508 39 509 1.65e-87 278
Msa0054540 MtrunA17_Chr5g0431591 39.286 336 184 5 180 513 2 319 2.26e-87 271
Msa0054540 MtrunA17_Chr7g0246221 32.510 486 317 6 3 488 6 480 2.56e-87 277
Msa0054540 MtrunA17_Chr1g0200961 35.812 511 308 9 1 509 2 494 1.54e-86 275
Msa0054540 MtrunA17_Chr6g0451641 34.091 484 298 11 1 476 13 483 2.85e-86 275
Msa0054540 MtrunA17_Chr6g0466941 35.031 491 286 12 5 476 8 484 4.47e-86 275
Msa0054540 MtrunA17_Chr4g0046631 35.394 469 271 10 22 476 35 485 5.05e-86 275
Msa0054540 MtrunA17_Chr3g0082701 32.008 528 327 10 5 514 12 525 9.54e-86 274
Msa0054540 MtrunA17_Chr7g0254641 31.600 500 327 8 19 512 24 514 1.17e-85 273
Msa0054540 MtrunA17_Chr6g0451691 32.994 491 301 11 4 476 14 494 1.66e-85 273
Msa0054540 MtrunA17_Chr5g0401681 33.988 509 308 10 10 514 8 492 1.08e-84 270
Msa0054540 MtrunA17_Chr4g0039901 33.194 479 304 8 33 511 36 498 1.86e-84 270
Msa0054540 MtrunA17_Chr4g0011941 61.111 198 76 1 312 509 1 197 4.82e-84 258
Msa0054540 MtrunA17_Chr2g0314731 32.371 485 299 9 3 482 8 468 1.15e-83 267
Msa0054540 MtrunA17_Chr4g0046331 30.726 537 320 14 4 512 2 514 1.73e-83 268
Msa0054540 MtrunA17_Chr6g0451741 32.924 489 302 9 4 476 34 512 3.91e-83 268
Msa0054540 MtrunA17_Chr1g0205371 33.531 507 318 7 3 509 8 495 4.70e-83 266
Msa0054540 MtrunA17_Chr4g0046321 30.769 507 309 13 26 512 28 512 7.28e-83 266
Msa0054540 MtrunA17_Chr1g0213671 34.497 487 292 10 33 509 35 504 1.10e-82 266
Msa0054540 MtrunA17_Chr8g0351801 33.542 480 279 11 42 499 44 505 1.26e-82 266
Msa0054540 MtrunA17_Chr4g0046351 31.028 506 309 12 26 512 28 512 1.91e-82 265
Msa0054540 MtrunA17_Chr4g0008101 31.992 522 329 10 4 512 14 522 5.31e-82 264
Msa0054540 MtrunA17_Chr2g0304871 32.665 499 312 10 26 514 31 515 5.89e-82 264
Msa0054540 MtrunA17_Chr4g0011851 57.282 206 87 1 305 510 9 213 7.25e-82 253
Msa0054540 MtrunA17_Chr6g0458561 32.554 513 324 8 10 514 30 528 8.57e-81 261
Msa0054540 MtrunA17_Chr4g0053621 32.558 516 315 10 3 512 6 494 1.14e-80 260
Msa0054540 MtrunA17_Chr7g0265611 31.558 507 324 11 10 510 26 515 2.49e-80 259
Msa0054540 MtrunA17_Chr4g0052861 31.081 518 323 12 1 512 1 490 8.16e-80 258
Msa0054540 MtrunA17_Chr6g0451781 31.545 466 301 6 21 476 66 523 1.18e-79 259
Msa0054540 MtrunA17_Chr4g0039391 34.240 441 272 9 41 478 44 469 3.07e-79 256
Msa0054540 MtrunA17_Chr4g0011931 44.625 307 151 5 4 310 8 295 1.09e-78 248
Msa0054540 MtrunA17_Chr2g0314721 33.186 452 283 8 33 482 45 479 6.30e-78 253
Msa0054540 MtrunA17_Chr7g0246131 31.151 504 321 9 3 499 7 491 1.30e-77 252
Msa0054540 MtrunA17_Chr1g0176831 31.120 482 309 8 3 482 38 498 2.73e-77 251
Msa0054540 MtrunA17_Chr7g0246121 33.470 487 308 7 3 488 6 477 3.99e-77 251
Msa0054540 MtrunA17_Chr4g0056951 33.689 469 295 7 44 512 56 508 4.16e-77 251
Msa0054540 MtrunA17_Chr5g0401691 32.008 478 298 9 3 478 25 477 1.37e-76 249
Msa0054540 MtrunA17_Chr4g0011861 43.525 278 146 4 33 310 30 296 2.01e-76 243
Msa0054540 MtrunA17_Chr8g0339311 31.200 500 314 11 6 482 3 495 2.73e-76 249
Msa0054540 MtrunA17_Chr4g0052851 32.720 489 292 11 16 501 17 471 3.23e-76 248
Msa0054540 MtrunA17_Chr4g0017411 31.727 498 307 9 16 512 14 479 3.56e-75 245
Msa0054540 MtrunA17_Chr1g0197851 31.151 504 309 11 1 494 4 479 3.18e-74 243
Msa0054540 MtrunA17_Chr7g0246151 32.677 508 310 14 3 501 7 491 4.72e-74 243
Msa0054540 MtrunA17_Chr1g0197891 30.616 503 312 10 2 494 4 479 1.88e-73 241
Msa0054540 MtrunA17_Chr1g0197871 30.242 496 317 9 5 494 7 479 2.28e-73 240
Msa0054540 MtrunA17_Chr1g0197881 30.297 505 314 11 1 494 1 478 4.47e-73 240
Msa0054540 MtrunA17_Chr6g0451681 30.550 491 268 9 13 495 42 467 1.64e-72 238
Msa0054540 MtrunA17_Chr4g0052881 29.191 507 332 9 8 512 10 491 2.25e-71 236
Msa0054540 MtrunA17_Chr5g0419451 31.452 496 305 13 24 512 52 519 3.66e-71 236
Msa0054540 MtrunA17_Chr5g0430071 39.803 304 178 4 212 512 56 357 4.25e-70 228
Msa0054540 MtrunA17_Chr7g0246181 33.333 501 317 10 3 501 6 491 6.49e-70 232
Msa0054540 MtrunA17_Chr5g0446101 36.364 297 179 4 214 509 23 310 2.06e-65 214
Msa0054540 MtrunA17_Chr4g0058211 44.843 223 117 2 291 513 1 217 3.97e-64 207
Msa0054540 MtrunA17_Chr8g0346261 31.976 491 291 18 34 511 86 546 9.52e-64 216
Msa0054540 MtrunA17_Chr3g0101591 48.205 195 100 1 315 509 42 235 3.96e-63 206
Msa0054540 MtrunA17_Chr2g0296651 30.042 476 311 9 6 478 4 460 2.51e-62 212
Msa0054540 MtrunA17_Chr5g0432751 28.921 491 313 12 18 496 21 487 1.13e-60 207
Msa0054540 MtrunA17_Chr1g0200951 28.660 485 317 11 35 510 64 528 9.79e-60 206
Msa0054540 MtrunA17_Chr2g0296661 30.983 468 294 10 44 505 44 488 1.20e-58 202
Msa0054540 MtrunA17_Chr1g0210091 28.921 491 311 11 8 482 41 509 8.07e-56 195
Msa0054540 MtrunA17_Chr5g0445371 40.226 266 122 6 248 512 1 230 1.82e-55 186
Msa0054540 MtrunA17_Chr8g0377341 30.067 449 285 15 35 477 70 495 2.35e-55 194
Msa0054540 MtrunA17_Chr1g0160861 36.972 284 170 4 229 511 62 337 3.40e-55 188
Msa0054540 MtrunA17_Chr1g0174431 42.788 208 109 3 312 512 1 205 9.91e-55 183
Msa0054540 MtrunA17_Chr2g0310351 41.791 201 116 1 312 512 1 200 9.95e-54 180
Msa0054540 MtrunA17_Chr5g0445761 50.000 198 98 1 312 509 1 197 2.01e-53 179
Msa0054540 MtrunA17_Chr6g0463621 45.050 202 105 3 312 509 1 200 1.24e-52 177
Msa0054540 MtrunA17_Chr5g0445751 35.312 320 175 8 7 312 6 307 1.26e-52 181
Msa0054540 MtrunA17_Chr8g0390871 41.429 210 120 3 304 512 19 226 5.14e-52 176
Msa0054540 MtrunA17_Chr6g0463611 34.304 309 180 6 3 309 21 308 5.83e-52 179
Msa0054540 MtrunA17_Chr5g0445351 49.102 167 84 1 339 505 51 216 2.51e-49 169
Msa0054540 MtrunA17_Chr8g0370641 26.585 489 337 11 6 480 10 490 3.29e-48 174
Msa0054540 MtrunA17_Chr6g0451811 39.614 207 119 2 308 512 1 203 3.96e-48 165
Msa0054540 MtrunA17_Chr3g0101541 63.333 120 44 0 360 479 1 120 2.01e-47 161
Msa0054540 MtrunA17_Chr1g0198191 27.515 487 318 14 3 477 20 483 2.73e-47 172
Msa0054540 MtrunA17_Chr1g0174421 32.862 283 179 4 33 315 48 319 4.92e-47 166
Msa0054540 MtrunA17_Chr4g0046681 43.713 167 92 1 312 476 31 197 1.14e-46 162
Msa0054540 MtrunA17_Chr8g0370651 25.813 492 344 10 24 501 36 520 3.55e-46 169
Msa0054540 MtrunA17_Chr3g0107611 25.657 495 335 11 4 480 23 502 7.43e-46 168
Msa0054540 MtrunA17_Chr6g0451771 42.105 171 97 1 308 476 18 188 5.16e-44 155
Msa0054540 MtrunA17_Chr5g0430041 44.318 176 92 2 338 507 1 176 6.71e-44 153
Msa0054540 MtrunA17_Chr5g0413911 28.125 512 314 15 30 510 40 528 9.58e-44 162
Msa0054540 MtrunA17_Chr5g0402981 42.105 190 103 3 322 508 2 187 1.21e-43 153
Msa0054540 MtrunA17_Chr2g0280071 26.772 508 307 12 33 510 64 536 3.71e-43 163
Msa0054540 MtrunA17_Chr4g0046661 43.103 174 97 1 305 476 18 191 1.48e-42 151
Msa0054540 MtrunA17_Chr8g0364651 26.392 485 328 13 2 478 4 467 1.92e-42 158
Msa0054540 MtrunA17_Chr5g0423621 40.761 184 106 2 328 511 1 181 4.52e-42 148
Msa0054540 MtrunA17_Chr3g0086681 44.720 161 84 2 356 512 9 168 6.59e-42 147
Msa0054540 MtrunA17_Chr2g0280081 27.696 473 291 14 60 510 561 1004 6.82e-42 160
Msa0054540 MtrunA17_Chr2g0280081 27.664 441 278 12 60 482 60 477 2.77e-37 147
Msa0054540 MtrunA17_Chr2g0314781 43.871 155 87 0 328 482 1 155 1.07e-41 147
Msa0054540 MtrunA17_Chr2g0280121 27.542 472 295 14 60 510 64 509 2.30e-41 155
Msa0054540 MtrunA17_Chr5g0445361 52.632 133 62 1 382 514 8 139 5.48e-41 144
Msa0054540 MtrunA17_Chr5g0409051 24.165 509 363 10 14 510 11 508 8.23e-41 154
Msa0054540 MtrunA17_Chr3g0117301 52.941 119 56 0 363 481 1 119 9.95e-41 142
Msa0054540 MtrunA17_Chr4g0074581 26.984 504 315 18 3 477 32 511 2.33e-40 153
Msa0054540 MtrunA17_Chr5g0430151 42.045 176 100 2 338 512 1 175 4.27e-40 143
Msa0054540 MtrunA17_Chr2g0334021 24.587 484 339 10 34 514 37 497 1.41e-38 147
Msa0054540 MtrunA17_Chr4g0030741 30.000 340 213 7 1 335 30 349 1.57e-38 144
Msa0054540 MtrunA17_Chr3g0107541 24.781 456 310 9 41 480 59 497 2.25e-38 147
Msa0054540 MtrunA17_Chr8g0387101 27.292 469 299 14 60 510 62 506 1.13e-37 145
Msa0054540 MtrunA17_Chr2g0280041 25.367 477 297 9 60 510 92 535 5.77e-37 143
Msa0054540 MtrunA17_Chr5g0445411 43.125 160 88 3 4 161 17 175 6.62e-37 134
Msa0054540 MtrunA17_Chr3g0135841 25.510 490 315 13 34 490 44 516 5.03e-36 140
Msa0054540 MtrunA17_Chr4g0076171 41.489 188 82 5 328 509 1 166 1.44e-35 130
Msa0054540 MtrunA17_Chr1g0151221 25.149 505 333 16 34 510 41 528 1.28e-34 136
Msa0054540 MtrunA17_Chr4g0028321 47.015 134 69 2 380 512 25 157 1.65e-34 127
Msa0054540 MtrunA17_Chr4g0046701 44.800 125 67 1 354 476 1 125 7.30e-34 125
Msa0054540 MtrunA17_Chr5g0430171 38.916 203 110 3 33 235 38 226 2.43e-33 126
Msa0054540 MtrunA17_Chr3g0116731 44.521 146 63 3 365 509 3 131 6.57e-33 122
Msa0054540 MtrunA17_Chr4g0046691 30.855 269 168 6 29 296 36 287 1.19e-32 126
Msa0054540 MtrunA17_Chr2g0310371 43.151 146 82 1 5 150 1 145 2.11e-32 121
Msa0054540 MtrunA17_Chr2g0280011 35.294 204 121 5 315 510 11 211 3.77e-32 122
Msa0054540 MtrunA17_Chr5g0431631 42.336 137 75 2 8 140 23 159 5.14e-32 120
Msa0054540 MtrunA17_Chr5g0402971 28.814 295 193 7 26 313 34 318 9.28e-32 124
Msa0054540 MtrunA17_Chr8g0364631 26.596 470 294 13 33 478 33 475 1.78e-31 127
Msa0054540 MtrunA17_Chr4g0046671 29.268 328 200 9 1 310 4 317 3.50e-31 123
Msa0054540 MtrunA17_Chr2g0280061 34.804 204 122 5 315 510 11 211 9.12e-31 119
Msa0054540 MtrunA17_Chr6g0477081 30.040 253 153 5 170 422 13 241 2.16e-29 115
Msa0054540 MtrunA17_Chr5g0444981 42.012 169 96 2 327 494 26 193 1.01e-28 113
Msa0054540 MtrunA17_Chr0c19g0493771 26.160 474 301 17 57 514 211 651 3.67e-28 119
Msa0054540 MtrunA17_Chr3g0116721 32.836 201 121 5 140 338 2 190 6.80e-28 110
Msa0054540 MtrunA17_Chr3g0117321 48.718 117 59 1 34 150 9 124 9.99e-28 107
Msa0054540 MtrunA17_Chr1g0207851 27.431 288 186 7 43 322 49 321 1.25e-27 114
Msa0054540 MtrunA17_Chr6g0451801 26.403 303 209 6 7 299 14 312 2.04e-25 107
Msa0054540 MtrunA17_Chr4g0030761 34.591 159 78 5 363 512 1 142 8.34e-25 100
Msa0054540 MtrunA17_Chr3g0141801 25.631 515 313 20 1 496 13 476 1.97e-23 103
Msa0054540 MtrunA17_Chr5g0430051 58.228 79 32 1 33 111 39 116 2.73e-23 94.7
Msa0054540 MtrunA17_Chr8g0372711 32.456 228 134 7 260 479 243 458 4.90e-23 102
Msa0054540 MtrunA17_Chr8g0351391 23.975 488 315 17 40 507 49 500 5.30e-23 102
Msa0054540 MtrunA17_Chr8g0351421 23.819 529 355 18 1 510 11 510 1.21e-22 101
Msa0054540 MtrunA17_Chr6g0457421 23.516 455 297 16 53 495 81 496 1.75e-22 100
Msa0054540 MtrunA17_Chr5g0431601 48.193 83 42 1 68 150 1 82 2.72e-22 90.9
Msa0054540 MtrunA17_Chr4g0067191 24.381 525 314 20 1 479 1 488 3.79e-22 99.8
Msa0054540 MtrunA17_Chr8g0351461 23.748 539 342 20 1 510 11 509 3.96e-22 99.8
Msa0054540 MtrunA17_Chr3g0105761 30.058 173 110 3 314 480 2 169 4.17e-22 94.4
Msa0054540 MtrunA17_Chr3g0128461 24.190 463 293 17 53 496 91 514 7.03e-22 99.0
Msa0054540 MtrunA17_Chr2g0313821 24.565 460 302 17 63 511 90 515 7.15e-22 99.0
Msa0054540 MtrunA17_Chr4g0038271 23.567 471 306 17 60 500 110 556 1.11e-21 98.6
Msa0054540 MtrunA17_Chr8g0351441 24.939 409 259 15 125 510 126 509 1.32e-21 97.8
Msa0054540 MtrunA17_Chr8g0351401 24.764 424 255 17 118 510 120 510 2.82e-21 97.1
Msa0054540 MtrunA17_Chr1g0204271 23.869 398 265 12 125 507 127 501 1.87e-20 94.4
Msa0054540 MtrunA17_Chr8g0369791 24.074 486 307 19 3 479 7 439 2.02e-20 94.0
Msa0054540 MtrunA17_Chr6g0484771 36.290 124 79 0 68 191 1 124 2.29e-20 87.8
Msa0054540 MtrunA17_Chr5g0396521 27.044 318 180 9 232 512 268 570 2.65e-20 94.4
Msa0054540 MtrunA17_Chr5g0445541 47.368 95 45 2 15 104 17 111 2.69e-20 87.0
Msa0054540 MtrunA17_Chr1g0203141 23.400 453 306 16 53 496 85 505 2.73e-20 94.0
Msa0054540 MtrunA17_Chr3g0107551 27.811 169 119 1 312 477 5 173 3.52e-20 89.0
Msa0054540 MtrunA17_Chr8g0364081 22.680 485 307 17 35 477 54 512 4.05e-20 93.6
Msa0054540 MtrunA17_Chr7g0248991 31.414 191 122 4 240 430 170 351 6.15e-20 91.7
Msa0054540 MtrunA17_Chr1g0203151 22.800 500 327 17 23 496 35 501 2.30e-19 91.3
Msa0054540 MtrunA17_Chr7g0215181 23.427 461 290 17 53 495 83 498 2.69e-19 90.9
Msa0054540 MtrunA17_Chr5g0403451 27.350 234 134 6 276 479 25 252 5.88e-19 87.0
Msa0054540 MtrunA17_Chr5g0408181 24.638 483 305 17 4 479 7 437 5.91e-19 89.7
Msa0054540 MtrunA17_Chr8g0351311 22.614 482 322 17 40 500 49 500 1.03e-18 89.0
Msa0054540 MtrunA17_Chr7g0260831 23.094 459 306 18 36 475 39 469 1.11e-18 89.0
Msa0054540 MtrunA17_Chr3g0105751 26.316 323 206 13 1 310 18 321 1.19e-18 87.8
Msa0054540 MtrunA17_Chr4g0004601 22.368 456 308 13 53 496 100 521 1.45e-18 88.6
Msa0054540 MtrunA17_Chr6g0479681 23.191 470 302 16 53 496 83 519 1.94e-18 88.2
Msa0054540 MtrunA17_Chr3g0107561 26.935 323 205 11 3 307 7 316 2.02e-18 86.7
Msa0054540 MtrunA17_Chr2g0288661 22.566 452 312 16 59 500 89 512 2.36e-18 88.2
Msa0054540 MtrunA17_Chr7g0235261 22.030 463 301 17 53 496 79 500 2.50e-18 87.8
Msa0054540 MtrunA17_Chr2g0293411 22.824 517 299 17 1 476 1 458 2.57e-18 87.8
Msa0054540 MtrunA17_Chr2g0313781 22.947 475 308 18 59 505 86 530 6.23e-18 86.7
Msa0054540 MtrunA17_Chr7g0260821 21.581 468 302 16 36 475 40 470 7.37e-18 86.3
Msa0054540 MtrunA17_Chr5g0445341 43.373 83 46 1 68 149 1 83 8.31e-18 78.2
Msa0054540 MtrunA17_Chr4g0063221 22.717 427 295 11 62 479 92 492 1.36e-17 85.9
Msa0054540 MtrunA17_Chr2g0313771 23.380 432 290 16 59 479 95 496 2.34e-17 85.1
Msa0054540 MtrunA17_Chr6g0449341 23.790 496 329 19 10 475 56 532 2.41e-17 85.1
Msa0054540 MtrunA17_Chr2g0313791 22.532 466 304 19 59 505 86 513 4.12e-17 84.0
Msa0054540 MtrunA17_Chr6g0449331 22.762 391 262 15 110 475 109 484 4.60e-17 84.0
Msa0054540 MtrunA17_Chr8g0381571 26.601 203 134 5 279 475 266 459 1.14e-16 82.4
Msa0054540 MtrunA17_Chr8g0381541 27.586 203 128 6 279 475 266 455 1.52e-16 82.4
Msa0054540 MtrunA17_Chr1g0163281 23.200 500 329 19 8 482 26 495 2.33e-16 81.6
Msa0054540 MtrunA17_Chr5g0429651 22.674 516 334 19 30 511 25 509 3.45e-16 81.3
Msa0054540 MtrunA17_Chr1g0176851 26.908 249 164 7 120 366 2 234 3.94e-16 77.8
Msa0054540 MtrunA17_Chr4g0004481 26.718 262 172 8 260 511 240 491 5.12e-16 80.5
Msa0054540 MtrunA17_Chr6g0449381 24.498 249 175 7 243 482 237 481 1.33e-15 79.3
Msa0054540 MtrunA17_Chr6g0472221 22.264 530 343 18 3 495 18 515 1.48e-15 79.3
Msa0054540 MtrunA17_Chr4g0076181 42.667 75 43 0 68 142 1 75 1.79e-15 74.3
Msa0054540 MtrunA17_Chr6g0449361 25.551 227 152 6 271 482 255 479 2.25e-15 78.6
Msa0054540 MtrunA17_Chr3g0107501 29.412 204 127 6 282 477 255 449 2.35e-15 78.6
Msa0054540 MtrunA17_Chr2g0313801 22.151 465 312 18 59 505 86 518 2.44e-15 78.6
Msa0054540 MtrunA17_Chr1g0163421 24.790 238 160 8 257 482 286 516 2.59e-15 78.6
Msa0054540 MtrunA17_Chr1g0163451 22.881 236 167 6 257 482 270 500 4.23e-15 77.8
Msa0054540 MtrunA17_Chr8g0372411 24.590 244 167 6 240 477 220 452 5.89e-15 77.4
Msa0054540 MtrunA17_Chr2g0307291 22.741 343 228 10 170 500 195 512 7.35e-15 77.0
Msa0054540 MtrunA17_Chr8g0388921 27.391 230 144 7 255 478 238 450 8.92e-15 76.6
Msa0054540 MtrunA17_Chr1g0179811 26.012 173 125 2 309 479 341 512 1.03e-14 76.6
Msa0054540 MtrunA17_Chr7g0255131 22.300 426 291 13 68 476 75 477 1.08e-14 76.6
Msa0054540 MtrunA17_Chr4g0044841 22.594 478 304 17 25 488 28 453 1.08e-14 76.3
Msa0054540 MtrunA17_Chr1g0164321 22.167 406 237 13 118 479 150 520 1.09e-14 76.6
Msa0054540 MtrunA17_Chr2g0313761 21.957 460 311 16 64 511 87 510 1.18e-14 76.6
Msa0054540 MtrunA17_Chr2g0313831 21.946 442 292 20 54 479 85 489 1.23e-14 76.3
Msa0054540 MtrunA17_Chr1g0154731 21.822 472 322 16 37 500 65 497 1.57e-14 75.9
Msa0054540 MtrunA17_Chr2g0307301 22.552 337 226 10 175 500 200 512 2.18e-14 75.5
Msa0054540 MtrunA17_Chr2g0313751 22.145 429 294 16 62 479 117 516 2.34e-14 75.5
Msa0054540 MtrunA17_Chr8g0362731 25.366 205 145 5 294 496 200 398 2.90e-14 74.7
Msa0054540 MtrunA17_Chr6g0449351 23.077 234 169 5 258 482 208 439 3.17e-14 75.1
Msa0054540 MtrunA17_Chr2g0314771 26.772 127 93 0 68 194 1 127 4.23e-14 70.1
Msa0054540 MtrunA17_Chr5g0446131 20.155 387 275 12 125 500 145 508 7.62e-14 73.9
Msa0054540 MtrunA17_Chr8g0372591 25.000 144 104 1 310 449 1 144 8.32e-14 68.9
Msa0054540 MtrunA17_Chr2g0293421 25.217 230 154 6 250 475 239 454 1.17e-13 73.2
Msa0054540 MtrunA17_Chr8g0354531 23.210 461 290 19 41 479 200 618 1.29e-13 73.6
Msa0054540 MtrunA17_Chr7g0262111 22.717 449 306 15 53 495 81 494 1.38e-13 73.2
Msa0054540 MtrunA17_Chr2g0308651 25.714 175 126 3 308 479 215 388 1.39e-13 72.8
Msa0054540 MtrunA17_Chr8g0380471 26.587 252 168 8 234 479 210 450 1.45e-13 72.8
Msa0054540 MtrunA17_Chr8g0387001 22.649 521 322 21 35 514 29 509 1.95e-13 72.8
Msa0054540 MtrunA17_Chr5g0443401 23.529 238 169 5 247 481 226 453 3.72e-13 71.6
Msa0054540 MtrunA17_Chr1g0163461 26.020 196 127 6 299 482 306 495 6.79e-13 70.9
Msa0054540 MtrunA17_Chr2g0286091 24.706 255 155 9 238 478 240 471 7.39e-13 70.9
Msa0054540 MtrunA17_Chr4g0044851 22.174 460 292 16 33 479 38 444 7.77e-13 70.5
Msa0054540 MtrunA17_Chr1g0153371 21.339 478 316 16 12 475 8 439 1.64e-12 69.7
Msa0054540 MtrunA17_Chr8g0354511 21.478 433 290 14 63 479 99 497 2.55e-12 69.3
Msa0054540 MtrunA17_Chr4g0056981 44.444 72 40 0 338 409 1 72 8.85e-12 60.8
Msa0054540 MtrunA17_Chr4g0026941 22.222 441 291 16 63 479 99 511 1.23e-11 67.0
Msa0054540 MtrunA17_Chr7g0227281 24.057 212 152 5 270 475 255 463 3.62e-11 65.5
Msa0054540 MtrunA17_Chr2g0280001 30.435 138 93 2 33 167 64 201 4.95e-11 62.8
Msa0054540 MtrunA17_Chr1g0176861 37.500 88 50 2 3 90 12 94 5.28e-11 59.3
Msa0054540 MtrunA17_Chr2g0280051 28.986 138 95 2 33 167 74 211 5.54e-11 63.9
Msa0054540 MtrunA17_Chr6g0451761 20.000 295 203 9 5 296 13 277 8.12e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0054540 AT3G26330.1 47.541 488 236 6 27 511 26 496 1.04e-155 453
Msa0054540 AT4G31500.1 46.327 490 246 7 25 511 22 497 4.05e-155 452
Msa0054540 AT3G26300.1 44.942 514 262 8 1 511 1 496 1.15e-153 448
Msa0054540 AT3G26320.1 45.825 491 246 6 24 511 23 496 1.91e-149 437
Msa0054540 AT5G57260.1 46.450 493 242 7 25 511 23 499 3.35e-149 437
Msa0054540 AT3G26310.1 42.802 514 270 8 3 513 5 497 1.82e-146 430
Msa0054540 AT3G26290.1 46.154 481 239 6 34 511 33 496 1.36e-140 415
Msa0054540 AT3G26290.2 46.362 481 238 7 34 511 46 509 1.85e-140 415
Msa0054540 AT3G26170.1 44.401 509 264 11 7 509 3 498 2.12e-140 414
Msa0054540 AT2G02580.1 45.720 514 258 8 1 511 1 496 2.57e-139 411
Msa0054540 AT1G13080.1 44.358 514 265 9 5 512 3 501 3.15e-139 411
Msa0054540 AT3G26210.1 45.493 477 241 9 41 513 40 501 6.88e-139 410
Msa0054540 AT3G48270.1 42.975 484 247 7 28 508 27 484 6.98e-139 410
Msa0054540 AT1G13110.1 42.495 513 272 9 5 509 3 500 2.42e-138 409
Msa0054540 AT3G26180.1 45.322 481 246 9 33 509 31 498 1.46e-137 407
Msa0054540 AT2G24180.1 44.033 486 248 6 27 509 31 495 1.50e-136 404
Msa0054540 AT3G48280.1 41.454 509 270 8 1 508 3 484 4.42e-136 403
Msa0054540 AT3G48310.1 41.529 484 254 7 28 508 28 485 2.37e-135 401
Msa0054540 AT5G25120.1 41.420 507 274 7 7 509 3 490 9.27e-135 400
Msa0054540 AT1G13090.2 45.572 463 230 9 33 489 29 475 8.58e-134 397
Msa0054540 AT3G26280.2 43.281 506 259 10 11 509 31 515 1.55e-133 397
Msa0054540 AT3G26280.1 43.222 509 261 10 11 512 14 501 1.58e-133 397
Msa0054540 AT4G13770.1 38.431 510 296 6 5 511 4 498 3.03e-133 396
Msa0054540 AT5G25140.1 40.434 507 279 7 7 509 3 490 2.04e-132 394
Msa0054540 AT5G25180.1 40.784 510 275 9 3 509 5 490 1.08e-131 392
Msa0054540 AT3G48320.1 42.430 502 263 8 9 508 8 485 1.38e-131 391
Msa0054540 AT3G26270.1 43.000 500 255 11 18 509 20 497 1.97e-130 389
Msa0054540 AT3G48290.1 41.286 482 258 6 21 501 22 479 2.31e-130 388
Msa0054540 AT3G26160.1 44.055 513 268 10 1 509 1 498 2.84e-130 388
Msa0054540 AT3G26190.1 44.606 482 247 10 33 509 29 495 8.87e-130 387
Msa0054540 AT3G26230.1 43.836 511 262 11 5 509 3 494 1.31e-129 387
Msa0054540 AT5G25130.1 40.157 508 282 6 3 509 4 490 2.21e-128 383
Msa0054540 AT3G26200.1 45.342 483 242 10 33 509 29 495 4.04e-128 383
Msa0054540 AT3G26150.1 41.313 518 275 11 1 509 1 498 7.11e-125 374
Msa0054540 AT3G48290.2 39.173 508 258 7 21 501 22 505 2.76e-124 374
Msa0054540 AT3G44250.1 44.513 483 243 11 33 508 29 493 1.55e-123 371
Msa0054540 AT3G48300.1 41.480 446 237 6 34 478 31 453 6.46e-122 366
Msa0054540 AT3G48300.2 41.480 446 237 6 34 478 33 455 6.88e-122 366
Msa0054540 AT3G53280.1 42.443 483 254 9 33 509 29 493 2.06e-121 365
Msa0054540 AT1G13100.1 42.418 455 240 7 41 489 37 475 2.53e-120 362
Msa0054540 AT3G26830.1 40.122 491 272 9 5 490 3 476 3.77e-120 362
Msa0054540 AT4G13310.1 39.783 460 255 6 24 479 24 465 2.03e-118 358
Msa0054540 AT3G26220.1 42.829 516 269 13 1 509 1 497 5.87e-118 357
Msa0054540 AT2G30770.1 38.831 479 272 6 33 509 34 493 2.27e-114 347
Msa0054540 AT4G13290.1 38.889 450 247 6 33 479 34 458 4.17e-112 341
Msa0054540 AT3G53300.1 41.322 484 260 10 33 509 29 495 1.19e-111 340
Msa0054540 AT5G07990.1 36.154 520 306 10 1 512 1 502 6.04e-110 337
Msa0054540 AT1G11610.2 38.797 482 274 7 33 512 34 496 4.11e-109 334
Msa0054540 AT5G24950.1 36.117 479 286 7 33 509 33 493 5.43e-109 333
Msa0054540 AT1G11610.1 39.387 457 257 6 33 487 34 472 6.66e-108 331
Msa0054540 AT5G35715.1 39.597 447 251 8 68 509 1 433 1.06e-107 328
Msa0054540 AT5G42590.1 38.596 513 292 8 1 509 1 494 1.83e-106 327
Msa0054540 AT2G30750.1 40.685 467 257 5 23 487 24 472 3.38e-106 326
Msa0054540 AT2G45560.1 36.802 519 305 9 2 513 6 508 3.93e-106 327
Msa0054540 AT5G24960.1 37.214 481 278 7 33 509 34 494 4.32e-99 308
Msa0054540 AT5G04330.1 37.372 487 283 11 33 512 33 504 4.19e-98 306
Msa0054540 AT1G33720.1 35.249 522 305 11 3 513 9 508 4.94e-98 306
Msa0054540 AT2G45550.1 33.781 521 316 10 2 513 8 508 6.12e-98 305
Msa0054540 AT1G13080.2 42.338 385 203 7 133 512 13 383 2.69e-97 300
Msa0054540 AT5G06900.1 34.765 489 298 8 4 487 1 473 4.05e-97 303
Msa0054540 AT2G45570.1 36.133 512 305 9 9 513 13 509 1.74e-96 302
Msa0054540 AT4G36220.1 35.438 491 276 10 40 512 48 515 2.87e-94 296
Msa0054540 AT4G12300.1 35.744 484 293 8 31 512 41 508 3.18e-94 296
Msa0054540 AT4G12320.1 34.375 512 316 10 7 512 13 510 1.84e-93 294
Msa0054540 AT2G40890.1 33.265 490 299 9 33 514 28 497 6.57e-93 292
Msa0054540 AT4G22710.1 33.686 472 297 6 41 512 62 517 2.86e-91 289
Msa0054540 AT4G22690.1 33.263 472 299 6 41 512 93 548 9.97e-90 286
Msa0054540 AT2G45580.1 35.211 497 295 10 26 512 29 508 3.84e-89 283
Msa0054540 AT4G31970.1 32.752 516 327 8 9 512 9 516 7.77e-89 282
Msa0054540 AT4G13310.2 38.701 385 215 5 24 405 24 390 1.06e-88 278
Msa0054540 AT4G31940.1 33.141 519 322 11 9 512 9 517 6.45e-88 280
Msa0054540 AT3G61040.1 35.163 492 298 8 24 513 25 497 1.32e-87 278
Msa0054540 AT5G06905.1 33.665 502 289 11 9 483 10 494 1.17e-86 276
Msa0054540 AT4G15360.1 33.553 456 284 6 28 479 36 476 5.29e-85 272
Msa0054540 AT2G42250.1 33.766 462 283 6 29 482 38 484 6.68e-85 272
Msa0054540 AT3G20090.2 32.296 514 327 7 3 512 15 511 2.71e-84 270
Msa0054540 AT4G12310.1 33.755 474 298 7 41 512 53 512 2.80e-84 270
Msa0054540 AT1G74550.1 33.008 512 296 9 13 514 8 482 1.55e-83 267
Msa0054540 AT3G25180.1 33.786 515 312 12 7 510 10 506 1.67e-83 268
Msa0054540 AT3G26180.2 49.810 263 127 4 248 509 106 364 1.58e-81 258
Msa0054540 AT3G26180.2 54.762 84 37 1 33 116 31 113 2.00e-21 96.3
Msa0054540 AT2G14100.1 32.101 514 320 8 5 512 17 507 1.79e-81 263
Msa0054540 AT5G10610.1 33.138 513 309 10 3 510 5 488 3.61e-81 261
Msa0054540 AT3G20940.1 30.876 502 318 10 22 514 32 513 2.54e-80 260
Msa0054540 AT3G53290.1 38.902 437 223 10 78 509 5 402 4.85e-80 256
Msa0054540 AT5G10600.1 33.547 468 287 8 33 499 47 491 5.95e-80 259
Msa0054540 AT4G20240.1 36.211 417 239 8 27 436 24 420 1.03e-79 256
Msa0054540 AT5G44620.1 33.197 488 307 8 24 509 38 508 1.14e-79 258
Msa0054540 AT1G01280.1 31.783 516 332 9 3 512 2 503 1.14e-79 258
Msa0054540 AT2G27000.1 33.264 478 296 8 43 514 50 510 1.67e-79 258
Msa0054540 AT3G20950.1 31.161 491 304 7 3 479 13 483 2.14e-79 258
Msa0054540 AT1G74540.1 31.923 520 297 12 3 506 2 480 2.31e-79 257
Msa0054540 AT3G32047.1 31.470 483 303 8 4 479 15 476 3.85e-79 256
Msa0054540 AT3G52970.2 31.081 518 324 12 13 509 19 524 4.42e-79 257
Msa0054540 AT3G20130.1 30.977 481 300 8 43 514 53 510 8.47e-79 256
Msa0054540 AT5G67310.1 31.765 510 314 12 1 505 12 492 1.29e-78 255
Msa0054540 AT3G52970.1 31.361 507 323 11 13 509 19 510 1.44e-78 255
Msa0054540 AT5G57220.1 30.739 514 315 12 6 512 4 483 5.46e-78 253
Msa0054540 AT4G37400.1 32.340 470 291 10 46 512 44 489 7.59e-77 250
Msa0054540 AT2G25160.1 31.107 524 333 14 4 513 6 515 8.05e-77 251
Msa0054540 AT4G37430.1 30.843 522 316 13 6 512 1 492 2.25e-76 249
Msa0054540 AT3G20100.1 33.184 446 275 8 41 479 50 479 9.67e-76 248
Msa0054540 AT3G20140.1 32.181 463 290 9 22 479 32 475 2.64e-75 246
Msa0054540 AT4G37330.1 32.752 516 304 15 4 512 6 485 2.67e-75 246
Msa0054540 AT4G15330.1 32.080 452 283 7 34 479 40 473 4.07e-74 243
Msa0054540 AT3G20110.1 30.724 511 327 12 5 512 13 499 1.33e-73 242
Msa0054540 AT4G37340.1 30.874 515 324 11 2 512 3 489 1.44e-73 242
Msa0054540 AT5G42580.1 32.949 434 255 9 53 479 60 464 3.74e-73 241
Msa0054540 AT5G36220.1 32.213 506 309 11 14 512 16 494 4.53e-73 240
Msa0054540 AT4G37410.1 30.845 509 321 11 9 512 7 489 5.40e-73 240
Msa0054540 AT1G33720.4 35.606 396 224 9 128 513 2 376 6.48e-73 236
Msa0054540 AT1G33720.3 35.606 396 224 9 128 513 2 376 6.48e-73 236
Msa0054540 AT1G33720.5 35.606 396 224 9 128 513 2 376 6.48e-73 236
Msa0054540 AT1G50520.1 32.680 459 257 11 41 477 52 480 1.67e-72 240
Msa0054540 AT4G37320.1 31.478 521 307 13 4 512 6 488 1.83e-72 239
Msa0054540 AT4G15350.1 31.938 454 267 12 43 479 45 473 7.50e-72 238
Msa0054540 AT4G37360.1 31.609 522 310 14 2 512 3 488 7.57e-72 237
Msa0054540 AT4G31950.1 30.344 524 322 13 9 513 9 508 1.22e-71 237
Msa0054540 AT3G20120.4 32.150 479 294 11 43 512 52 508 1.43e-71 237
Msa0054540 AT4G12330.1 30.631 444 292 6 41 482 55 484 7.33e-71 235
Msa0054540 AT1G50560.1 32.444 450 271 11 43 479 54 483 8.79e-71 235
Msa0054540 AT4G20240.2 35.917 387 222 7 27 407 24 390 1.84e-70 230
Msa0054540 AT4G37370.1 31.287 505 313 12 14 512 10 486 2.06e-69 231
Msa0054540 AT5G09970.1 32.024 509 299 19 1 490 33 513 2.27e-69 231
Msa0054540 AT1G33730.1 35.809 377 211 9 135 501 5 360 2.77e-69 226
Msa0054540 AT1G33730.2 35.809 377 211 9 135 501 5 360 2.77e-69 226
Msa0054540 AT4G37310.1 29.903 515 338 10 5 513 4 501 4.56e-69 230
Msa0054540 AT3G20080.2 30.000 500 325 8 22 514 32 513 2.50e-68 228
Msa0054540 AT3G20080.1 30.000 500 325 8 22 514 32 513 2.50e-68 228
Msa0054540 AT1G13710.1 32.033 487 292 18 34 510 55 512 4.82e-68 228
Msa0054540 AT1G33720.2 34.129 419 224 10 128 513 2 401 1.15e-67 223
Msa0054540 AT3G20960.2 31.907 514 322 9 4 510 15 507 1.75e-67 226
Msa0054540 AT3G28740.1 30.957 491 305 11 28 512 35 497 4.03e-67 225
Msa0054540 AT1G28430.1 30.926 443 284 6 43 479 51 477 1.14e-66 224
Msa0054540 AT2G45580.2 40.210 286 163 5 230 512 74 354 6.32e-66 218
Msa0054540 AT5G24960.2 35.027 374 225 4 33 405 34 390 2.12e-65 217
Msa0054540 AT1G66540.1 33.000 400 234 10 119 512 4 375 7.19e-65 216
Msa0054540 AT3G20130.2 30.023 433 271 8 91 514 73 482 2.70e-64 217
Msa0054540 AT5G47990.1 31.120 482 308 9 3 477 13 477 2.77e-64 218
Msa0054540 AT3G61880.1 31.463 499 299 16 27 511 61 530 4.81e-64 218
Msa0054540 AT3G61880.2 31.463 499 299 16 27 511 61 530 9.74e-64 217
Msa0054540 AT1G74110.1 30.755 530 322 19 3 510 30 536 1.22e-63 216
Msa0054540 AT4G15380.1 29.158 463 292 9 59 512 69 504 1.27e-62 213
Msa0054540 AT2G23190.1 28.514 498 318 13 10 499 52 519 1.58e-62 214
Msa0054540 AT3G20090.1 31.525 387 245 6 128 510 1 371 3.13e-62 209
Msa0054540 AT2G27010.1 29.228 479 296 10 43 514 46 488 5.57e-62 211
Msa0054540 AT2G23220.1 29.730 481 301 12 33 501 47 502 2.86e-61 209
Msa0054540 AT4G15330.2 30.310 452 263 8 34 479 40 445 3.31e-61 209
Msa0054540 AT1G13090.1 41.844 282 143 8 33 309 29 294 1.49e-60 201
Msa0054540 AT2G05180.1 32.225 391 247 6 43 431 52 426 3.19e-60 205
Msa0054540 AT2G46660.1 29.149 470 295 13 23 482 61 502 7.34e-60 206
Msa0054540 AT1G01190.1 28.821 458 293 10 27 477 68 499 7.07e-59 204
Msa0054540 AT1G01190.2 28.821 458 293 10 27 477 73 504 9.82e-59 203
Msa0054540 AT3G20960.1 30.496 423 268 8 95 510 1 404 8.94e-57 195
Msa0054540 AT2G30490.1 28.266 467 298 11 43 496 44 486 5.71e-55 192
Msa0054540 AT1G66540.2 33.234 337 196 8 177 512 8 316 4.69e-54 185
Msa0054540 AT3G25180.2 32.000 400 249 9 7 397 10 395 4.04e-53 185
Msa0054540 AT3G20120.2 31.218 394 240 11 128 512 1 372 4.97e-53 184
Msa0054540 AT3G20120.3 31.218 394 240 11 128 512 1 372 4.97e-53 184
Msa0054540 AT3G20120.1 31.218 394 240 11 128 512 1 372 4.97e-53 184
Msa0054540 AT2G25160.2 29.825 399 262 10 4 394 6 394 4.61e-50 177
Msa0054540 AT3G61040.2 31.633 392 240 10 24 409 25 394 1.28e-49 175
Msa0054540 AT3G20080.4 28.426 394 257 8 128 514 1 376 3.24e-49 174
Msa0054540 AT3G20080.5 28.426 394 257 8 128 514 1 376 3.24e-49 174
Msa0054540 AT3G20080.6 28.426 394 257 8 128 514 1 376 3.24e-49 174
Msa0054540 AT3G20080.3 28.426 394 257 8 128 514 1 376 3.24e-49 174
Msa0054540 AT1G58260.1 24.249 466 327 10 33 482 38 493 2.10e-48 175
Msa0054540 AT5G05260.2 26.501 483 330 10 25 492 33 505 5.92e-48 174
Msa0054540 AT5G04630.1 25.600 500 313 12 3 477 11 476 1.15e-47 173
Msa0054540 AT2G22330.1 25.149 505 351 10 1 491 25 516 2.74e-47 172
Msa0054540 AT2G22330.2 25.149 505 351 10 1 491 48 539 4.46e-47 172
Msa0054540 AT1G79370.1 25.243 515 352 14 3 492 10 516 7.72e-47 171
Msa0054540 AT1G64940.1 25.862 522 358 12 3 511 4 509 1.11e-46 170
Msa0054540 AT3G10560.1 27.495 531 319 17 9 510 19 512 1.52e-46 170
Msa0054540 AT2G45580.3 30.848 389 243 9 27 405 30 402 1.97e-46 167
Msa0054540 AT4G39950.1 24.750 501 348 10 5 491 29 514 2.27e-46 170
Msa0054540 AT1G11600.1 26.434 488 329 12 4 477 7 478 4.15e-46 169
Msa0054540 AT4G39950.2 24.449 499 352 10 5 491 69 554 4.58e-46 170
Msa0054540 AT1G16400.1 24.297 498 351 9 1 483 15 501 1.20e-45 168
Msa0054540 AT1G16410.1 23.732 493 358 9 3 483 16 502 7.90e-45 166
Msa0054540 AT5G05260.1 25.466 483 303 10 25 492 33 473 2.91e-44 163
Msa0054540 AT5G36220.2 32.070 343 207 7 170 512 32 348 3.23e-44 160
Msa0054540 AT1G64950.1 25.714 490 339 12 33 511 33 508 1.26e-43 162
Msa0054540 AT1G64930.1 27.088 491 332 14 33 511 33 509 5.00e-41 154
Msa0054540 AT2G12190.1 26.160 474 322 13 27 484 24 485 1.23e-40 154
Msa0054540 AT3G20935.1 36.538 208 124 3 308 510 130 334 2.32e-40 149
Msa0054540 AT3G03470.1 27.038 503 321 15 33 512 32 511 2.23e-38 147
Msa0054540 AT3G10570.1 24.583 480 327 15 44 510 55 512 2.52e-37 144
Msa0054540 AT5G04660.1 25.566 442 272 12 60 477 71 479 3.18e-37 144
Msa0054540 AT5G25900.1 24.274 482 343 10 24 501 33 496 7.31e-37 143
Msa0054540 AT2G26170.1 25.391 512 341 16 2 492 20 511 2.13e-33 133
Msa0054540 AT5G61320.1 26.087 437 289 11 54 484 55 463 2.70e-33 132
Msa0054540 AT2G45560.2 29.568 301 193 7 2 295 6 294 5.90e-31 122
Msa0054540 AT1G16410.2 23.636 385 281 8 3 380 16 394 6.05e-31 125
Msa0054540 AT1G64900.1 24.689 482 339 10 39 511 38 504 1.94e-30 124
Msa0054540 AT5G35917.1 25.238 420 278 10 23 429 33 429 1.19e-29 122
Msa0054540 AT3G53305.1 45.865 133 67 1 356 488 181 308 2.37e-29 118
Msa0054540 AT3G53305.1 39.444 180 97 4 68 244 1 171 4.32e-27 112
Msa0054540 AT2G45560.3 31.967 244 149 5 2 239 6 238 5.50e-29 115
Msa0054540 AT4G20235.1 27.536 276 161 6 4 275 3 243 5.27e-26 109
Msa0054540 AT4G20235.1 44.156 77 42 1 404 479 254 330 2.83e-17 83.6
Msa0054540 AT2G44890.1 23.970 534 338 20 4 510 16 508 1.74e-25 110
Msa0054540 AT2G45510.1 25.776 419 256 15 118 510 119 508 9.97e-25 107
Msa0054540 AT2G26170.2 24.887 442 297 13 72 492 1 428 1.01e-24 107
Msa0054540 AT1G31800.1 30.556 216 141 4 299 512 361 569 3.87e-24 106
Msa0054540 AT4G19230.1 24.590 488 295 18 15 487 15 444 4.22e-24 105
Msa0054540 AT5G45340.1 24.187 492 304 16 1 479 1 436 8.67e-24 104
Msa0054540 AT4G19230.2 24.788 472 282 18 15 471 15 428 2.79e-22 100
Msa0054540 AT5G45340.2 24.587 484 296 16 1 471 1 428 2.97e-22 99.8
Msa0054540 AT2G44890.2 23.077 533 326 20 4 510 16 490 3.34e-22 100
Msa0054540 AT5G38450.1 23.636 495 309 15 35 495 46 505 6.51e-22 99.4
Msa0054540 AT1G75130.1 22.979 470 321 13 37 500 63 497 3.72e-21 97.1
Msa0054540 AT2G29090.2 25.000 456 284 16 33 479 50 456 1.49e-20 95.1
Msa0054540 AT2G29090.1 25.000 456 284 16 33 479 50 456 1.49e-20 95.1
Msa0054540 AT3G14640.1 22.845 464 310 16 59 511 87 513 9.02e-20 92.8
Msa0054540 AT3G14640.2 22.391 460 317 14 59 511 109 535 1.29e-19 92.4
Msa0054540 AT1G69500.1 23.046 499 317 18 27 479 19 496 3.12e-19 91.3
Msa0054540 AT4G15110.1 26.744 258 149 7 261 479 294 550 3.39e-19 91.3
Msa0054540 AT3G14610.1 23.488 430 280 16 64 479 91 485 3.77e-19 90.9
Msa0054540 AT3G14650.1 22.454 432 291 15 59 479 87 485 6.39e-19 90.1
Msa0054540 AT1G57750.1 22.727 308 211 10 212 503 201 497 7.67e-19 89.7
Msa0054540 AT1G19630.1 23.762 505 302 18 1 479 1 448 7.85e-19 89.7
Msa0054540 AT1G24540.1 20.408 539 356 14 10 510 17 520 8.29e-19 89.7
Msa0054540 AT3G26125.1 21.458 480 327 16 53 510 81 532 1.14e-18 89.4
Msa0054540 AT2G26710.1 23.131 428 287 13 62 479 93 488 1.83e-18 89.0
Msa0054540 AT1G63710.1 24.764 529 339 18 12 507 9 511 2.15e-18 88.6
Msa0054540 AT1G19630.3 24.351 501 292 19 1 475 1 440 3.28e-18 87.8
Msa0054540 AT3G14620.1 22.897 428 293 12 59 479 91 488 4.93e-18 87.4
Msa0054540 AT5G08250.1 22.538 457 291 14 77 500 48 474 7.97e-18 86.7
Msa0054540 AT5G08250.2 22.201 536 339 18 5 500 39 536 1.01e-17 86.7
Msa0054540 AT3G53130.1 28.090 178 115 3 309 479 341 512 1.26e-17 86.3
Msa0054540 AT1G65340.1 23.413 252 184 5 243 488 237 485 1.85e-17 85.5
Msa0054540 AT1G13150.1 23.636 220 154 3 301 510 302 517 2.93e-17 85.1
Msa0054540 AT5G23190.1 24.299 428 257 16 106 502 139 530 3.11e-17 85.1
Msa0054540 AT5G63450.1 21.561 487 344 11 5 475 7 471 4.76e-17 84.3
Msa0054540 AT3G56630.1 23.651 482 324 18 28 489 23 480 5.01e-17 84.3
Msa0054540 AT5G63450.2 21.561 487 344 11 5 475 65 529 1.04e-16 83.6
Msa0054540 AT5G24900.1 22.198 455 284 17 53 479 88 500 1.29e-16 83.2
Msa0054540 AT1G13140.1 22.133 497 336 15 10 479 25 497 2.08e-16 82.4
Msa0054540 AT5G24910.1 23.723 274 192 7 232 495 255 521 2.47e-16 82.4
Msa0054540 AT4G39510.1 23.278 421 266 14 118 512 116 505 3.44e-16 81.6
Msa0054540 AT3G14630.1 23.023 430 281 16 64 479 88 481 5.36e-16 81.3
Msa0054540 AT1G13140.2 24.868 189 132 2 301 479 283 471 5.97e-16 80.9
Msa0054540 AT3G14630.2 23.023 430 281 16 64 479 143 536 8.17e-16 80.9
Msa0054540 AT1G19630.2 24.561 456 266 17 1 430 1 404 1.08e-15 79.7
Msa0054540 AT4G39500.1 21.656 314 221 9 216 514 165 468 1.27e-15 79.7
Msa0054540 AT4G39500.2 21.656 314 221 9 216 514 215 518 1.59e-15 79.7
Msa0054540 AT4G27710.1 23.274 507 284 17 25 479 37 490 1.72e-15 79.7
Msa0054540 AT1G67110.1 22.561 492 311 16 35 495 47 499 1.90e-15 79.3
Msa0054540 AT2G29090.3 24.841 314 203 10 174 479 73 361 5.02e-15 77.4
Msa0054540 AT2G23180.1 23.364 214 152 4 305 512 305 512 9.35e-15 77.4
Msa0054540 AT1G05160.2 22.294 462 287 14 33 472 46 457 1.59e-14 76.3
Msa0054540 AT1G05160.1 22.294 462 287 14 33 472 46 457 1.59e-14 76.3
Msa0054540 AT5G24900.2 28.272 191 124 5 293 479 202 383 2.14e-14 75.5
Msa0054540 AT4G39480.1 21.753 308 213 9 225 512 214 513 5.52e-14 74.7
Msa0054540 AT5G05690.3 27.419 186 129 4 303 485 147 329 6.26e-14 73.6
Msa0054540 AT5G05690.1 26.966 178 125 3 303 477 266 441 7.69e-14 74.3
Msa0054540 AT5G52400.1 24.074 216 157 4 282 496 300 509 7.92e-14 74.3
Msa0054540 AT4G39490.1 21.613 310 209 10 227 512 217 516 8.28e-14 74.3
Msa0054540 AT3G01900.1 22.222 459 313 12 67 514 67 492 1.09e-13 73.9
Msa0054540 AT5G38970.2 25.381 197 140 3 285 478 166 358 1.92e-13 72.4
Msa0054540 AT5G38970.4 25.381 197 140 3 285 478 166 358 1.92e-13 72.4
Msa0054540 AT5G38970.1 25.381 197 140 3 285 478 247 439 3.14e-13 72.4
Msa0054540 AT1G57750.2 23.237 241 163 7 212 441 201 430 6.04e-13 71.2
Msa0054540 AT2G34500.1 23.039 204 152 3 278 478 257 458 6.97e-13 71.2
Msa0054540 AT4G32170.1 22.599 177 134 3 309 482 303 479 9.65e-13 70.9
Msa0054540 AT5G52320.2 24.444 180 131 3 305 482 302 478 1.03e-12 70.9
Msa0054540 AT5G52320.1 24.444 180 131 3 305 482 302 478 1.07e-12 70.9
Msa0054540 AT2G28850.1 24.581 179 129 4 303 478 284 459 1.71e-12 70.1
Msa0054540 AT2G34490.1 24.157 178 131 2 303 478 288 463 1.94e-12 70.1
Msa0054540 AT5G36110.1 29.480 173 114 3 309 478 281 448 2.12e-12 69.7
Msa0054540 AT2G28860.1 24.157 178 129 4 304 478 285 459 3.54e-12 68.9
Msa0054540 AT4G15396.1 25.000 240 137 9 285 494 249 475 5.86e-12 68.2
Msa0054540 AT3G30180.1 25.114 219 156 5 274 489 236 449 1.65e-11 67.0
Msa0054540 AT2G21910.1 22.088 249 167 8 277 512 272 506 2.48e-11 66.6
Msa0054540 AT4G15396.3 24.645 211 133 7 276 473 240 437 4.51e-11 65.5

Find 117 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGGTTTCGTTAGTAATT+TGG 0.141603 1_2:+9247362 Msa0054540:three_prime_UTR
TAATGGTTTCATTAGCAATT+TGG 0.174229 1_2:+9247388 Msa0054540:three_prime_UTR
AATGGTTTCGTTAGTAATTT+GGG 0.192066 1_2:+9247363 Msa0054540:three_prime_UTR
CCAAAACCACTTCCTCTAAT+TGG 0.228537 1_2:+9245085 Msa0054540:CDS
CCAATTAGAGGAAGTGGTTT+TGG 0.233533 1_2:-9245085 None:intergenic
GTCTTACAATGGTTTAGATT+TGG 0.233789 1_2:+9245306 Msa0054540:CDS
ATGAGTTCAGTGGATATTAA+AGG 0.244095 1_2:+9247039 Msa0054540:CDS
GAACTCATAAAGAATCTTTC+AGG 0.250035 1_2:-9247024 None:intergenic
CGTTAGTAATTTGGGGATAA+TGG 0.268549 1_2:+9247371 Msa0054540:three_prime_UTR
TTGCACCTTATAGCTCTTAT+TGG 0.272263 1_2:+9245332 Msa0054540:CDS
TCTTACAATGGTTTAGATTT+GGG 0.278753 1_2:+9245307 Msa0054540:CDS
CTTTCAGGATAAAACTCTTC+AGG 0.280265 1_2:-9247009 None:intergenic
AATGGTTTCATTAGCAATTT+GGG 0.291397 1_2:+9247389 Msa0054540:three_prime_UTR
CATGATAGGTCCATATTGTT+TGG 0.317342 1_2:-9245161 None:intergenic
GGCTCTTGATTGATGTGTCT+TGG 0.320145 1_2:+9244852 Msa0054540:five_prime_UTR
ATTTCTAGATCAATTGATAA+TGG 0.323426 1_2:+9247345 Msa0054540:three_prime_UTR
TATTTCATCTTATATGTATT+CGG 0.329817 1_2:+9247458 Msa0054540:three_prime_UTR
TTATGAGGAAGAAGTTGAAT+TGG 0.339793 1_2:+9245567 Msa0054540:CDS
CCACATCAAAGCTGTGCTTA+TGG 0.340676 1_2:+9245888 Msa0054540:CDS
ATCATATGTAAGATAGCGTT+TGG 0.344969 1_2:+9245526 Msa0054540:CDS
ATCTTCTTCACTCCTTTGAT+TGG 0.353547 1_2:+9247154 Msa0054540:CDS
GCAATTTGGGAATGTATATA+CGG 0.354680 1_2:+9247402 Msa0054540:three_prime_UTR
TTCTTATGCATAGTTATTCC+TGG 0.357766 1_2:-9247228 None:intergenic
CAAGTTCAGCAGTAATGGTT+TGG 0.372210 1_2:+9246701 Msa0054540:CDS
ATGCAGAACATCTTTATTGC+AGG 0.372601 1_2:+9246670 Msa0054540:intron
TGGTGTAAATTTCCAATTAG+AGG 0.373198 1_2:-9245097 None:intergenic
TGGCAACTCTCCAAACAATA+TGG 0.375218 1_2:+9245151 Msa0054540:CDS
TGAACCTTGTTCATCACTCT+TGG 0.385382 1_2:-9246748 None:intergenic
CAATATGATGGTGATGAAAA+AGG 0.388284 1_2:+9245463 Msa0054540:CDS
TCTCTCCAATAAGAGCTATA+AGG 0.398012 1_2:-9245337 None:intergenic
TGTGGTCATCAATAACTCTT+TGG 0.401174 1_2:-9245756 None:intergenic
GATAGAATCAAAGGAACTCT+TGG 0.404947 1_2:+9245694 Msa0054540:CDS
TCATAAAACATTCAAGGAGT+TGG 0.405158 1_2:+9245723 Msa0054540:CDS
GCTCTTGATTGATGTGTCTT+GGG 0.409919 1_2:+9244853 Msa0054540:five_prime_UTR
GAATTAGATAGAATCATAAT+AGG 0.414180 1_2:-9247494 None:intergenic
TAGCAAGGGATGCTGAGAAT+TGG 0.416195 1_2:+9246980 Msa0054540:CDS
TTCAGCAAGGCCTAAAACTA+AGG 0.417153 1_2:+9245786 Msa0054540:CDS
TGAGTTCAGTGGATATTAAA+GGG 0.417759 1_2:+9247040 Msa0054540:CDS
TCCACATAGCTTAGCTCATT+AGG 0.418449 1_2:+9244826 Msa0054540:five_prime_UTR
TATGAGGAAGAAGTTGAATT+GGG 0.421084 1_2:+9245568 Msa0054540:CDS
TAGAAATAATACAAACTTTG+AGG 0.421619 1_2:-9247329 None:intergenic
TTGACTGTATCATTCAAGTA+AGG 0.421975 1_2:-9244787 None:intergenic
CAACTTTCTATTGTTTCTCT+TGG 0.422028 1_2:-9246898 None:intergenic
TTGATCTTCACCTTGTTCCT+AGG 0.424607 1_2:+9247253 Msa0054540:CDS
AGATACAAATGCAATTTGTA+AGG 0.425440 1_2:+9244950 Msa0054540:five_prime_UTR
AGTGATGAACAAGGTTCAAA+TGG 0.429204 1_2:+9246753 Msa0054540:CDS
AAGTTCAGCAGTAATGGTTT+GGG 0.432273 1_2:+9246702 Msa0054540:CDS
TTTCTTAGTCCTAGGAAAGA+TGG 0.432422 1_2:-9245280 None:intergenic
ATTCTTCTTCCACTTCCAAA+TGG 0.433596 1_2:-9247081 None:intergenic
AGGGATTGATGTGGGGATGA+AGG 0.442625 1_2:-9245127 None:intergenic
TTTCAGGATAAAACTCTTCA+GGG 0.443440 1_2:-9247008 None:intergenic
TTCACCACTGCTTTAAGATA+AGG 0.446130 1_2:-9246835 None:intergenic
GCAAGTAGACCATCTTTCCT+AGG 0.447449 1_2:+9245271 Msa0054540:CDS
ATGGTCTACTTGCAAATTCA+AGG 0.452409 1_2:-9245261 None:intergenic
TACTTGCAAATTCAAGGTCA+TGG 0.459788 1_2:-9245255 None:intergenic
GTTTCTCTTGGCAATAGTAA+TGG 0.460272 1_2:-9246886 None:intergenic
CTCTAGTCTATGTTAATGCA+TGG 0.465988 1_2:+9246953 Msa0054540:CDS
TGTCAATAGTACACATCCTA+TGG 0.475729 1_2:-9247285 None:intergenic
ACAACTCCCATGTTCATTGC+AGG 0.478233 1_2:-9247108 None:intergenic
CAATTTGTAAGGTTTCATCA+TGG 0.492254 1_2:+9244961 Msa0054540:exon
AGACACAAGTTCAGCAGTAA+TGG 0.492771 1_2:+9246696 Msa0054540:CDS
AAATTTCCAATTAGAGGAAG+TGG 0.497288 1_2:-9245091 None:intergenic
ACTTGCAAATTCAAGGTCAT+GGG 0.499241 1_2:-9245254 None:intergenic
GAGGCTTCATAAAACATTCA+AGG 0.502100 1_2:+9245717 Msa0054540:CDS
TTTGATTGGAAGCTGCCTCA+TGG 0.502754 1_2:+9247168 Msa0054540:CDS
AATTTGTAAGGTTTCATCAT+GGG 0.504832 1_2:+9244962 Msa0054540:exon
ATAGAATCAAAGGAACTCTT+GGG 0.505709 1_2:+9245695 Msa0054540:CDS
GAAGAAGTTGAATTGGGAAG+TGG 0.522689 1_2:+9245574 Msa0054540:CDS
GGGATTGATGTGGGGATGAA+GGG 0.524008 1_2:-9245126 None:intergenic
TCATATGTAAGATAGCGTTT+GGG 0.524829 1_2:+9245527 Msa0054540:CDS
ATAATGAATAGAATTAAGAT+TGG 0.525475 1_2:-9245010 None:intergenic
CTAAGAAAATTGTCTTACAA+TGG 0.526588 1_2:+9245295 Msa0054540:CDS
CAAAAGTTGTCACAATATGA+TGG 0.527770 1_2:+9245451 Msa0054540:CDS
ATTCTCAGCATCCCTTGCTA+TGG 0.528113 1_2:-9246977 None:intergenic
GTGGGGATGAAGGGTCAAGC+TGG 0.530527 1_2:-9245117 None:intergenic
AAGATTCTTTATGAGTTCAG+TGG 0.534079 1_2:+9247029 Msa0054540:CDS
TACTTGAATGATACAGTCAA+TGG 0.537369 1_2:+9244790 Msa0054540:five_prime_UTR
CATCCCCACATCAATCCCTA+TGG 0.540620 1_2:+9245131 Msa0054540:CDS
GCTGAGGAAACAACCAAGGT+TGG 0.543368 1_2:-9245205 None:intergenic
GGTTGGGTTGATAGAATCAA+AGG 0.546062 1_2:+9245685 Msa0054540:CDS
GAGTTAATTCCATTTGGAAG+TGG 0.554142 1_2:+9247072 Msa0054540:CDS
ATTTGTAAGGTTTCATCATG+GGG 0.554770 1_2:+9244963 Msa0054540:exon
GGCAATAGTAATGGTGATGG+AGG 0.559911 1_2:-9246877 None:intergenic
ATGAGGCAGCTTCCAATCAA+AGG 0.560280 1_2:-9247166 None:intergenic
CTTGGCAATAGTAATGGTGA+TGG 0.562242 1_2:-9246880 None:intergenic
ATTGTTTGGAGAGTTGCCAT+AGG 0.562903 1_2:-9245147 None:intergenic
TTGTTTGGAGAGTTGCCATA+GGG 0.564933 1_2:-9245146 None:intergenic
AATGATACAGTCAATGGTAT+CGG 0.566955 1_2:+9244796 Msa0054540:five_prime_UTR
TTAATGCATGGGCCATAGCA+AGG 0.568336 1_2:+9246965 Msa0054540:CDS
GCCTAATGAGCTAAGCTATG+TGG 0.569254 1_2:-9244827 None:intergenic
CCTTGGCTATGTACCAACCT+TGG 0.572745 1_2:+9245192 Msa0054540:CDS
TCTAGTCTATGTTAATGCAT+GGG 0.580372 1_2:+9246954 Msa0054540:CDS
GCTTCCTTATCTTAAAGCAG+TGG 0.588181 1_2:+9246831 Msa0054540:CDS
AATGTGTCCTGCAATGAACA+TGG 0.600228 1_2:+9247101 Msa0054540:CDS
CTATCAACCCAACCCAACAA+TGG 0.603958 1_2:-9245676 None:intergenic
TTGAATTGGGAAGTGGACAA+AGG 0.606977 1_2:+9245581 Msa0054540:CDS
CCATAAGCACAGCTTTGATG+TGG 0.618162 1_2:-9245888 None:intergenic
TCCTAGGAAAAGAAAACCAT+AGG 0.618487 1_2:+9247269 Msa0054540:CDS
TAATGCATGGGCCATAGCAA+GGG 0.623902 1_2:+9246966 Msa0054540:CDS
AGAGCATCATCAACTCCACC+AGG 0.630698 1_2:+9245061 Msa0054540:CDS
TTAGATAGAATCATAATAGG+TGG 0.632216 1_2:-9247491 None:intergenic
CAATCCAAGAGTGATGAACA+AGG 0.637514 1_2:+9246744 Msa0054540:CDS
ATGGTTTCGTTAGTAATTTG+GGG 0.639527 1_2:+9247364 Msa0054540:three_prime_UTR
GCCTATTAGAGAAAATGAAG+TGG 0.645315 1_2:+9245417 Msa0054540:CDS
CCAAGGTTGGTACATAGCCA+AGG 0.647279 1_2:-9245192 None:intergenic
AGTTGCCATAGGGATTGATG+TGG 0.648246 1_2:-9245136 None:intergenic
GAATCAAAGGAACTCTTGGG+AGG 0.654225 1_2:+9245698 Msa0054540:CDS
GCAATAGTAATGGTGATGGA+GGG 0.656394 1_2:-9246876 None:intergenic
TTGGATACAAAAGTGAAACC+AGG 0.661870 1_2:+9247210 Msa0054540:CDS
ATAGCTTAGCTCATTAGGCG+TGG 0.663919 1_2:+9244831 Msa0054540:five_prime_UTR
GTTGCCATAGGGATTGATGT+GGG 0.665074 1_2:-9245135 None:intergenic
AAGAGTTATTGATGACCACA+TGG 0.682630 1_2:+9245759 Msa0054540:CDS
ACCACATGGATAATTCAGCA+AGG 0.687980 1_2:+9245773 Msa0054540:CDS
GCCTTGCTGAATTATCCATG+TGG 0.703534 1_2:-9245774 None:intergenic
TTGCCATAGGGATTGATGTG+GGG 0.717475 1_2:-9245134 None:intergenic
TGTTCCTTGTCAAAACCATG+AGG 0.719052 1_2:-9247183 None:intergenic
ATGTGTCCTGCAATGAACAT+GGG 0.730584 1_2:+9247102 Msa0054540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGAAAAAAGAAATA+AGG - chr1_2:9245925-9245944 None:intergenic 10.0%
!!! CAATTTTTATTTTTTTTGAA+TGG - chr1_2:9246472-9246491 None:intergenic 10.0%
!! TTCAAAAAAAATAAAAATTG+TGG + chr1_2:9246472-9246491 Msa0054540:intron 10.0%
!! TCAAAAAAAATAAAAATTGT+GGG + chr1_2:9246473-9246492 Msa0054540:intron 10.0%
!! ATAATGAATAGAATTAAGAT+TGG - chr1_2:9245013-9245032 None:intergenic 15.0%
!!! TAAAAGAATGTAAACTTTTA+GGG - chr1_2:9245396-9245415 None:intergenic 15.0%
!! AAAACAAAAATAAATATCCA+CGG - chr1_2:9245994-9246013 None:intergenic 15.0%
!! TTAGAAAATAATTGGAAATA+TGG + chr1_2:9246542-9246561 Msa0054540:intron 15.0%
!! TAGAAAATAATTGGAAATAT+GGG + chr1_2:9246543-9246562 Msa0054540:intron 15.0%
!! TATTTCATCTTATATGTATT+CGG + chr1_2:9247458-9247477 Msa0054540:three_prime_UTR 15.0%
!!! CTAAAAGAATGTAAACTTTT+AGG - chr1_2:9245397-9245416 None:intergenic 20.0%
!!! CTAAAAGTTTACATTCTTTT+AGG + chr1_2:9245395-9245414 Msa0054540:CDS 20.0%
!!! AAAATATGTTTTGGATTATG+AGG + chr1_2:9245552-9245571 Msa0054540:CDS 20.0%
!! ATGCTCAATTAGAAAATAAT+TGG + chr1_2:9246534-9246553 Msa0054540:intron 20.0%
!! AGAAAATAATTGGAAATATG+GGG + chr1_2:9246544-9246563 Msa0054540:intron 20.0%
!!! AATTTTGAGTTAATTCCATT+TGG + chr1_2:9247066-9247085 Msa0054540:CDS 20.0%
!! TAGAAATAATACAAACTTTG+AGG - chr1_2:9247332-9247351 None:intergenic 20.0%
!!! ATTTCTAGATCAATTGATAA+TGG + chr1_2:9247345-9247364 Msa0054540:three_prime_UTR 20.0%
!! GAATTAGATAGAATCATAAT+AGG - chr1_2:9247497-9247516 None:intergenic 20.0%
! AGATACAAATGCAATTTGTA+AGG + chr1_2:9244950-9244969 Msa0054540:five_prime_UTR 25.0%
! AATTTGTAAGGTTTCATCAT+GGG + chr1_2:9244962-9244981 Msa0054540:exon 25.0%
! CTAAGAAAATTGTCTTACAA+TGG + chr1_2:9245295-9245314 Msa0054540:CDS 25.0%
! TCTTACAATGGTTTAGATTT+GGG + chr1_2:9245307-9245326 Msa0054540:CDS 25.0%
!! GTTTGGGAAAAAATATGTTT+TGG + chr1_2:9245543-9245562 Msa0054540:CDS 25.0%
!!! CTTATTTTTTAGTGAAAGAG+AGG - chr1_2:9246287-9246306 None:intergenic 25.0%
! GATCAATATATCATCATAGA+AGG - chr1_2:9246608-9246627 None:intergenic 25.0%
!! TTAACATAGACTAGAGTTTT+TGG - chr1_2:9246949-9246968 None:intergenic 25.0%
! TAATGGTTTCGTTAGTAATT+TGG + chr1_2:9247362-9247381 Msa0054540:three_prime_UTR 25.0%
! AATGGTTTCGTTAGTAATTT+GGG + chr1_2:9247363-9247382 Msa0054540:three_prime_UTR 25.0%
! TAATGGTTTCATTAGCAATT+TGG + chr1_2:9247388-9247407 Msa0054540:three_prime_UTR 25.0%
! AATGGTTTCATTAGCAATTT+GGG + chr1_2:9247389-9247408 Msa0054540:three_prime_UTR 25.0%
! TTAGATAGAATCATAATAGG+TGG - chr1_2:9247494-9247513 None:intergenic 25.0%
TACTTGAATGATACAGTCAA+TGG + chr1_2:9244790-9244809 Msa0054540:five_prime_UTR 30.0%
AATGATACAGTCAATGGTAT+CGG + chr1_2:9244796-9244815 Msa0054540:five_prime_UTR 30.0%
CAATTTGTAAGGTTTCATCA+TGG + chr1_2:9244961-9244980 Msa0054540:exon 30.0%
ATTTGTAAGGTTTCATCATG+GGG + chr1_2:9244963-9244982 Msa0054540:exon 30.0%
AAATTTCCAATTAGAGGAAG+TGG - chr1_2:9245094-9245113 None:intergenic 30.0%
TGGTGTAAATTTCCAATTAG+AGG - chr1_2:9245100-9245119 None:intergenic 30.0%
! AAGACAATTTTCTTAGTCCT+AGG - chr1_2:9245291-9245310 None:intergenic 30.0%
GTCTTACAATGGTTTAGATT+TGG + chr1_2:9245306-9245325 Msa0054540:CDS 30.0%
CAAAAGTTGTCACAATATGA+TGG + chr1_2:9245451-9245470 Msa0054540:CDS 30.0%
! CAATATGATGGTGATGAAAA+AGG + chr1_2:9245463-9245482 Msa0054540:CDS 30.0%
ATCATATGTAAGATAGCGTT+TGG + chr1_2:9245526-9245545 Msa0054540:CDS 30.0%
TCATATGTAAGATAGCGTTT+GGG + chr1_2:9245527-9245546 Msa0054540:CDS 30.0%
TTATGAGGAAGAAGTTGAAT+TGG + chr1_2:9245567-9245586 Msa0054540:CDS 30.0%
TATGAGGAAGAAGTTGAATT+GGG + chr1_2:9245568-9245587 Msa0054540:CDS 30.0%
! TTCTGATCATTTTCCATTGT+TGG + chr1_2:9245663-9245682 Msa0054540:CDS 30.0%
! TCTGATCATTTTCCATTGTT+GGG + chr1_2:9245664-9245683 Msa0054540:CDS 30.0%
ATAGAATCAAAGGAACTCTT+GGG + chr1_2:9245695-9245714 Msa0054540:CDS 30.0%
TCATAAAACATTCAAGGAGT+TGG + chr1_2:9245723-9245742 Msa0054540:CDS 30.0%
!! ACTTCTTGTTCCTTAGTTTT+AGG - chr1_2:9245799-9245818 None:intergenic 30.0%
AAATAAATATCCACGGTGAA+AGG - chr1_2:9245987-9246006 None:intergenic 30.0%
ACTTCTATCTCTGACAATAA+TGG - chr1_2:9246183-9246202 None:intergenic 30.0%
! GCACATATAAAACTGATTTC+AGG - chr1_2:9246499-9246518 None:intergenic 30.0%
! CAACTTTCTATTGTTTCTCT+TGG - chr1_2:9246901-9246920 None:intergenic 30.0%
TCTAGTCTATGTTAATGCAT+GGG + chr1_2:9246954-9246973 Msa0054540:CDS 30.0%
TTTCAGGATAAAACTCTTCA+GGG - chr1_2:9247011-9247030 None:intergenic 30.0%
GAACTCATAAAGAATCTTTC+AGG - chr1_2:9247027-9247046 None:intergenic 30.0%
AAGATTCTTTATGAGTTCAG+TGG + chr1_2:9247029-9247048 Msa0054540:CDS 30.0%
ATGAGTTCAGTGGATATTAA+AGG + chr1_2:9247039-9247058 Msa0054540:CDS 30.0%
TGAGTTCAGTGGATATTAAA+GGG + chr1_2:9247040-9247059 Msa0054540:CDS 30.0%
TTCTTATGCATAGTTATTCC+TGG - chr1_2:9247231-9247250 None:intergenic 30.0%
ATGGTTTCGTTAGTAATTTG+GGG + chr1_2:9247364-9247383 Msa0054540:three_prime_UTR 30.0%
GCAATTTGGGAATGTATATA+CGG + chr1_2:9247402-9247421 Msa0054540:three_prime_UTR 30.0%
CATGATAGGTCCATATTGTT+TGG - chr1_2:9245164-9245183 None:intergenic 35.0%
CCAAGGTGTAAAAACATGAT+AGG - chr1_2:9245178-9245197 None:intergenic 35.0%
!! CCTATCATGTTTTTACACCT+TGG + chr1_2:9245175-9245194 Msa0054540:CDS 35.0%
ACTTGCAAATTCAAGGTCAT+GGG - chr1_2:9245257-9245276 None:intergenic 35.0%
TACTTGCAAATTCAAGGTCA+TGG - chr1_2:9245258-9245277 None:intergenic 35.0%
ATGGTCTACTTGCAAATTCA+AGG - chr1_2:9245264-9245283 None:intergenic 35.0%
TTTCTTAGTCCTAGGAAAGA+TGG - chr1_2:9245283-9245302 None:intergenic 35.0%
TTGCACCTTATAGCTCTTAT+TGG + chr1_2:9245332-9245351 Msa0054540:CDS 35.0%
TCTCTCCAATAAGAGCTATA+AGG - chr1_2:9245340-9245359 None:intergenic 35.0%
GCCTATTAGAGAAAATGAAG+TGG + chr1_2:9245417-9245436 Msa0054540:CDS 35.0%
! GCCACTTCATTTTCTCTAAT+AGG - chr1_2:9245421-9245440 None:intergenic 35.0%
! ATCATTTTCCATTGTTGGGT+TGG + chr1_2:9245668-9245687 Msa0054540:CDS 35.0%
! TCATTTTCCATTGTTGGGTT+GGG + chr1_2:9245669-9245688 Msa0054540:CDS 35.0%
GATAGAATCAAAGGAACTCT+TGG + chr1_2:9245694-9245713 Msa0054540:CDS 35.0%
GAGGCTTCATAAAACATTCA+AGG + chr1_2:9245717-9245736 Msa0054540:CDS 35.0%
TGTGGTCATCAATAACTCTT+TGG - chr1_2:9245759-9245778 None:intergenic 35.0%
! AAGAGTTATTGATGACCACA+TGG + chr1_2:9245759-9245778 Msa0054540:CDS 35.0%
GTGTCAGGATTTAGTAAAGA+CGG - chr1_2:9246060-9246079 None:intergenic 35.0%
!! ACGAATCAAAGTTGGTATAC+TGG - chr1_2:9246090-9246109 None:intergenic 35.0%
ACAACATGACGAATCAAAGT+TGG - chr1_2:9246098-9246117 None:intergenic 35.0%
! CTAATTGTGGTAAGTTCTAG+CGG - chr1_2:9246137-9246156 None:intergenic 35.0%
GCAATAGATGATCCTAATTG+TGG - chr1_2:9246150-9246169 None:intergenic 35.0%
AATGTTTGAATCCTTTGCAC+CGG - chr1_2:9246249-9246268 None:intergenic 35.0%
ATCATCATAGAAGGTGAAGA+GGG - chr1_2:9246599-9246618 None:intergenic 35.0%
TATCATCATAGAAGGTGAAG+AGG - chr1_2:9246600-9246619 None:intergenic 35.0%
ATGCAGAACATCTTTATTGC+AGG + chr1_2:9246670-9246689 Msa0054540:intron 35.0%
AAGTTCAGCAGTAATGGTTT+GGG + chr1_2:9246702-9246721 Msa0054540:CDS 35.0%
AGTGATGAACAAGGTTCAAA+TGG + chr1_2:9246753-9246772 Msa0054540:CDS 35.0%
!! TTCACCACTGCTTTAAGATA+AGG - chr1_2:9246838-9246857 None:intergenic 35.0%
GTTTCTCTTGGCAATAGTAA+TGG - chr1_2:9246889-9246908 None:intergenic 35.0%
CTCTAGTCTATGTTAATGCA+TGG + chr1_2:9246953-9246972 Msa0054540:CDS 35.0%
CTTTCAGGATAAAACTCTTC+AGG - chr1_2:9247012-9247031 None:intergenic 35.0%
GAGTTAATTCCATTTGGAAG+TGG + chr1_2:9247072-9247091 Msa0054540:CDS 35.0%
ATTCTTCTTCCACTTCCAAA+TGG - chr1_2:9247084-9247103 None:intergenic 35.0%
ATCTTCTTCACTCCTTTGAT+TGG + chr1_2:9247154-9247173 Msa0054540:CDS 35.0%
! TTTTGACAAGGAACAAGTGT+TGG + chr1_2:9247191-9247210 Msa0054540:CDS 35.0%
TTGGATACAAAAGTGAAACC+AGG + chr1_2:9247210-9247229 Msa0054540:CDS 35.0%
! GTTTTCTTTTCCTAGGAACA+AGG - chr1_2:9247266-9247285 None:intergenic 35.0%
TCCTAGGAAAAGAAAACCAT+AGG + chr1_2:9247269-9247288 Msa0054540:CDS 35.0%
! TCCTATGGTTTTCTTTTCCT+AGG - chr1_2:9247273-9247292 None:intergenic 35.0%
TGTCAATAGTACACATCCTA+TGG - chr1_2:9247288-9247307 None:intergenic 35.0%
CGTTAGTAATTTGGGGATAA+TGG + chr1_2:9247371-9247390 Msa0054540:three_prime_UTR 35.0%
TCCACATAGCTTAGCTCATT+AGG + chr1_2:9244826-9244845 Msa0054540:five_prime_UTR 40.0%
GCTCTTGATTGATGTGTCTT+GGG + chr1_2:9244853-9244872 Msa0054540:five_prime_UTR 40.0%
! CCAATTAGAGGAAGTGGTTT+TGG - chr1_2:9245088-9245107 None:intergenic 40.0%
CCAAAACCACTTCCTCTAAT+TGG + chr1_2:9245085-9245104 Msa0054540:CDS 40.0%
TTGTTTGGAGAGTTGCCATA+GGG - chr1_2:9245149-9245168 None:intergenic 40.0%
ATTGTTTGGAGAGTTGCCAT+AGG - chr1_2:9245150-9245169 None:intergenic 40.0%
TGGCAACTCTCCAAACAATA+TGG + chr1_2:9245151-9245170 Msa0054540:CDS 40.0%
! TTTTGCTGAGGAAACAACCA+AGG - chr1_2:9245212-9245231 None:intergenic 40.0%
! GGTTGTTTCCTCAGCAAAAA+TGG + chr1_2:9245213-9245232 Msa0054540:CDS 40.0%
!!! TTGTTCTGCCATTTTTGCTG+AGG - chr1_2:9245224-9245243 None:intergenic 40.0%
GAAGAAGTTGAATTGGGAAG+TGG + chr1_2:9245574-9245593 Msa0054540:CDS 40.0%
TTGAATTGGGAAGTGGACAA+AGG + chr1_2:9245581-9245600 Msa0054540:CDS 40.0%
!! GGTTGGGTTGATAGAATCAA+AGG + chr1_2:9245685-9245704 Msa0054540:CDS 40.0%
ACCACATGGATAATTCAGCA+AGG + chr1_2:9245773-9245792 Msa0054540:CDS 40.0%
TTCAGCAAGGCCTAAAACTA+AGG + chr1_2:9245786-9245805 Msa0054540:CDS 40.0%
TAAATATCCACGGTGAAAGG+AGG - chr1_2:9245984-9246003 None:intergenic 40.0%
! GAACATGTTTTCTCCTTGCA+AGG + chr1_2:9246014-9246033 Msa0054540:intron 40.0%
! AACATGTCGTTTACCTTGCA+AGG - chr1_2:9246030-9246049 None:intergenic 40.0%
!! AAGTTGGTATACTGGTTGAG+AGG - chr1_2:9246082-9246101 None:intergenic 40.0%
! TTGATTCGTCATGTTGTGAG+AGG + chr1_2:9246101-9246120 Msa0054540:intron 40.0%
CGCTAGAACTTACCACAATT+AGG + chr1_2:9246135-9246154 Msa0054540:intron 40.0%
TCATCATAGAAGGTGAAGAG+GGG - chr1_2:9246598-9246617 None:intergenic 40.0%
AGACACAAGTTCAGCAGTAA+TGG + chr1_2:9246696-9246715 Msa0054540:CDS 40.0%
CAAGTTCAGCAGTAATGGTT+TGG + chr1_2:9246701-9246720 Msa0054540:CDS 40.0%
CAATCCAAGAGTGATGAACA+AGG + chr1_2:9246744-9246763 Msa0054540:CDS 40.0%
TGAACCTTGTTCATCACTCT+TGG - chr1_2:9246751-9246770 None:intergenic 40.0%
GCTTCCTTATCTTAAAGCAG+TGG + chr1_2:9246831-9246850 Msa0054540:CDS 40.0%
!! GCAATAGTAATGGTGATGGA+GGG - chr1_2:9246879-9246898 None:intergenic 40.0%
CTTGGCAATAGTAATGGTGA+TGG - chr1_2:9246883-9246902 None:intergenic 40.0%
AATGTGTCCTGCAATGAACA+TGG + chr1_2:9247101-9247120 Msa0054540:CDS 40.0%
ATGTGTCCTGCAATGAACAT+GGG + chr1_2:9247102-9247121 Msa0054540:CDS 40.0%
TGTTCCTTGTCAAAACCATG+AGG - chr1_2:9247186-9247205 None:intergenic 40.0%
TTGATCTTCACCTTGTTCCT+AGG + chr1_2:9247253-9247272 Msa0054540:CDS 40.0%
GCCTAATGAGCTAAGCTATG+TGG - chr1_2:9244830-9244849 None:intergenic 45.0%
ATAGCTTAGCTCATTAGGCG+TGG + chr1_2:9244831-9244850 Msa0054540:five_prime_UTR 45.0%
GGCTCTTGATTGATGTGTCT+TGG + chr1_2:9244852-9244871 Msa0054540:five_prime_UTR 45.0%
TTGCCATAGGGATTGATGTG+GGG - chr1_2:9245137-9245156 None:intergenic 45.0%
GTTGCCATAGGGATTGATGT+GGG - chr1_2:9245138-9245157 None:intergenic 45.0%
AGTTGCCATAGGGATTGATG+TGG - chr1_2:9245139-9245158 None:intergenic 45.0%
GCAAGTAGACCATCTTTCCT+AGG + chr1_2:9245271-9245290 Msa0054540:CDS 45.0%
CTATCAACCCAACCCAACAA+TGG - chr1_2:9245679-9245698 None:intergenic 45.0%
GAATCAAAGGAACTCTTGGG+AGG + chr1_2:9245698-9245717 Msa0054540:CDS 45.0%
GCCTTGCTGAATTATCCATG+TGG - chr1_2:9245777-9245796 None:intergenic 45.0%
! CCATAAGCACAGCTTTGATG+TGG - chr1_2:9245891-9245910 None:intergenic 45.0%
CCACATCAAAGCTGTGCTTA+TGG + chr1_2:9245888-9245907 Msa0054540:CDS 45.0%
!! TATACTGGTTGAGAGGTGTC+AGG - chr1_2:9246075-9246094 None:intergenic 45.0%
! CTGATTTGAGCTGAGCGTTA+AGG + chr1_2:9246431-9246450 Msa0054540:intron 45.0%
!! GGCAATAGTAATGGTGATGG+AGG - chr1_2:9246880-9246899 None:intergenic 45.0%
TTAATGCATGGGCCATAGCA+AGG + chr1_2:9246965-9246984 Msa0054540:CDS 45.0%
TAATGCATGGGCCATAGCAA+GGG + chr1_2:9246966-9246985 Msa0054540:CDS 45.0%
ATTCTCAGCATCCCTTGCTA+TGG - chr1_2:9246980-9246999 None:intergenic 45.0%
TAGCAAGGGATGCTGAGAAT+TGG + chr1_2:9246980-9246999 Msa0054540:CDS 45.0%
ACAACTCCCATGTTCATTGC+AGG - chr1_2:9247111-9247130 None:intergenic 45.0%
ATGAGGCAGCTTCCAATCAA+AGG - chr1_2:9247169-9247188 None:intergenic 45.0%
TTTGATTGGAAGCTGCCTCA+TGG + chr1_2:9247168-9247187 Msa0054540:CDS 45.0%
! AGAGCATCATCAACTCCACC+AGG + chr1_2:9245061-9245080 Msa0054540:CDS 50.0%
!!! AGAGGAAGTGGTTTTGGACC+TGG - chr1_2:9245082-9245101 None:intergenic 50.0%
GGGATTGATGTGGGGATGAA+GGG - chr1_2:9245129-9245148 None:intergenic 50.0%
AGGGATTGATGTGGGGATGA+AGG - chr1_2:9245130-9245149 None:intergenic 50.0%
CATCCCCACATCAATCCCTA+TGG + chr1_2:9245131-9245150 Msa0054540:CDS 50.0%
!! CCAAGGTTGGTACATAGCCA+AGG - chr1_2:9245195-9245214 None:intergenic 50.0%
CCTTGGCTATGTACCAACCT+TGG + chr1_2:9245192-9245211 Msa0054540:CDS 50.0%
GCTGAGGAAACAACCAAGGT+TGG - chr1_2:9245208-9245227 None:intergenic 50.0%
AGTCATACCTCCTTTCACCG+TGG + chr1_2:9245974-9245993 Msa0054540:intron 50.0%
! GTGGTAAGTTCTAGCGGTTG+TGG - chr1_2:9246131-9246150 None:intergenic 50.0%
GCTGCACGATTGGATATGAC+TGG - chr1_2:9246227-9246246 None:intergenic 50.0%
GTCATATCCAATCGTGCAGC+CGG + chr1_2:9246227-9246246 Msa0054540:intron 50.0%
TGAGCTGAGCGTTAAGGAGT+TGG + chr1_2:9246437-9246456 Msa0054540:intron 50.0%
!!! GCTGCCTCATGGTTTTGACA+AGG + chr1_2:9247179-9247198 Msa0054540:CDS 50.0%
!!! GGAAGTGGTTTTGGACCTGG+TGG - chr1_2:9245079-9245098 None:intergenic 55.0%
GCTGAGCGTTAAGGAGTTGG+AGG + chr1_2:9246440-9246459 Msa0054540:intron 55.0%
GTGGGGATGAAGGGTCAAGC+TGG - chr1_2:9245120-9245139 None:intergenic 60.0%
!! CTTTGCACCGGCTGCACGAT+TGG - chr1_2:9246237-9246256 None:intergenic 60.0%
CAATCGTGCAGCCGGTGCAA+AGG + chr1_2:9246235-9246254 Msa0054540:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 9244790 9247517 9244790 ID=Msa0054540;Name=Msa0054540
chr1_2 mRNA 9244790 9247517 9244790 ID=Msa0054540-mRNA-1;Parent=Msa0054540;Name=Msa0054540-mRNA-1;_AED=0.12;_eAED=0.12;_QI=190|1|1|1|1|1|2|227|514
chr1_2 exon 9244790 9245909 9244790 ID=Msa0054540-mRNA-1:exon:3359;Parent=Msa0054540-mRNA-1
chr1_2 exon 9246676 9247517 9246676 ID=Msa0054540-mRNA-1:exon:3360;Parent=Msa0054540-mRNA-1
chr1_2 five_prime_UTR 9244790 9244979 9244790 ID=Msa0054540-mRNA-1:five_prime_utr;Parent=Msa0054540-mRNA-1
chr1_2 CDS 9244980 9245909 9244980 ID=Msa0054540-mRNA-1:cds;Parent=Msa0054540-mRNA-1
chr1_2 CDS 9246676 9247290 9246676 ID=Msa0054540-mRNA-1:cds;Parent=Msa0054540-mRNA-1
chr1_2 three_prime_UTR 9247291 9247517 9247291 ID=Msa0054540-mRNA-1:three_prime_utr;Parent=Msa0054540-mRNA-1
Gene Sequence

>Msa0054540

ATGGGGTTTCTTGTGCTTCTTTCTTTCTTGCCAATCTTAATTCTATTCATTATACACATCTACAAAATAAAGAGTGCAAGAAGAGCATCATCAACTCCACCAGGTCCAAAACCACTTCCTCTAATTGGAAATTTACACCAGCTTGACCCTTCATCCCCACATCAATCCCTATGGCAACTCTCCAAACAATATGGACCTATCATGTTTTTACACCTTGGCTATGTACCAACCTTGGTTGTTTCCTCAGCAAAAATGGCAGAACAAGTGTTGAAAACCCATGACCTTGAATTTGCAAGTAGACCATCTTTCCTAGGACTAAGAAAATTGTCTTACAATGGTTTAGATTTGGGTTTTGCACCTTATAGCTCTTATTGGAGAGAAATGAAAAAACTTTGCTCTCTTCATCTCTTTAGCCCTAAAAGTTTACATTCTTTTAGGCCTATTAGAGAAAATGAAGTGGCTGAATTGATTCAAAAGTTGTCACAATATGATGGTGATGAAAAAGGTGTGAACTTGAGTGAAACATTGTTGTCTTTCACAAATGCAATCATATGTAAGATAGCGTTTGGGAAAAAATATGTTTTGGATTATGAGGAAGAAGTTGAATTGGGAAGTGGACAAAGGAGAAGTAGATTGCAAGTTTTGCTTAATGAAGCACAAGCTTTGTTAACTGAGTTTTACTTTTCTGATCATTTTCCATTGTTGGGTTGGGTTGATAGAATCAAAGGAACTCTTGGGAGGCTTCATAAAACATTCAAGGAGTTGGATTTGATATACCAAAGAGTTATTGATGACCACATGGATAATTCAGCAAGGCCTAAAACTAAGGAACAAGAAGTTGCAGATATCATTGATATATTTTTGCAGATGATGAATGATAACTCACTATCTTTTGATCTTACTCTTGACCACATCAAAGCTGTGCTTATGAACATCTTTATTGCAGGAACAGACACAAGTTCAGCAGTAATGGTTTGGGCTATGACAGCATTGATGAACAATCCAAGAGTGATGAACAAGGTTCAAATGGAAATCAAAAGCTTATATGAAGACAAAGTTTTTATAAATGAAGATGATATTGAAAAGCTTCCTTATCTTAAAGCAGTGGTGAAAGAGACATTAAGATTATTCCCTCCATCACCATTACTATTGCCAAGAGAAACAATAGAAAGTTGTAACATAGATAGTTATGAGATTAAACCAAAAACTCTAGTCTATGTTAATGCATGGGCCATAGCAAGGGATGCTGAGAATTGGAAAGACCCTGAAGAGTTTTATCCTGAAAGATTCTTTATGAGTTCAGTGGATATTAAAGGGAAGAATTTTGAGTTAATTCCATTTGGAAGTGGAAGAAGAATGTGTCCTGCAATGAACATGGGAGTTGTCACTGTTGAGCTTACACTTGCTAATCTTCTTCACTCCTTTGATTGGAAGCTGCCTCATGGTTTTGACAAGGAACAAGTGTTGGATACAAAAGTGAAACCAGGAATAACTATGCATAAGAAAATTGATCTTCACCTTGTTCCTAGGAAAAGAAAACCATAG
Protein sequence

>Msa0054540

MGFLVLLSFLPILILFIIHIYKIKSARRASSTPPGPKPLPLIGNLHQLDPSSPHQSLWQLSKQYGPIMFLHLGYVPTLVVSSAKMAEQVLKTHDLEFASRPSFLGLRKLSYNGLDLGFAPYSSYWREMKKLCSLHLFSPKSLHSFRPIRENEVAELIQKLSQYDGDEKGVNLSETLLSFTNAIICKIAFGKKYVLDYEEEVELGSGQRRSRLQVLLNEAQALLTEFYFSDHFPLLGWVDRIKGTLGRLHKTFKELDLIYQRVIDDHMDNSARPKTKEQEVADIIDIFLQMMNDNSLSFDLTLDHIKAVLMNIFIAGTDTSSAVMVWAMTALMNNPRVMNKVQMEIKSLYEDKVFINEDDIEKLPYLKAVVKETLRLFPPSPLLLPRETIESCNIDSYEIKPKTLVYVNAWAIARDAENWKDPEEFYPERFFMSSVDIKGKNFELIPFGSGRRMCPAMNMGVVTVELTLANLLHSFDWKLPHGFDKEQVLDTKVKPGITMHKKIDLHLVPRKRKP*