AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0055340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055340 MtrunA17_Chr1g0149301 96.739 276 7 1 44 319 1 274 0.0 536
Msa0055340 MtrunA17_Chr3g0137851 61.154 260 76 3 44 302 1 236 8.12e-100 294
Msa0055340 MtrunA17_Chr4g0063731 57.762 277 110 2 44 318 1 272 4.54e-96 285
Msa0055340 MtrunA17_Chr4g0012631 43.772 281 105 6 44 311 1 241 7.52e-64 202
Msa0055340 MtrunA17_Chr8g0372781 38.163 283 151 4 44 313 1 272 3.58e-53 176
Msa0055340 MtrunA17_Chr7g0231141 43.056 72 40 1 178 249 5 75 6.58e-16 72.4
Msa0055340 MtrunA17_Chr7g0231151 42.708 96 31 2 44 139 1 72 1.49e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0055340 AT2G26660.1 56.989 279 111 3 44 319 1 273 2.16e-94 281
Msa0055340 AT5G20150.1 56.877 269 84 4 44 312 1 237 4.05e-91 272
Msa0055340 AT5G15330.1 38.079 302 148 6 44 319 1 289 9.66e-57 186
Msa0055340 AT5G15330.2 38.079 302 148 6 44 319 70 358 5.72e-56 186
Msa0055340 AT2G45130.1 39.711 277 107 6 44 312 1 225 1.69e-54 178

Find 95 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCGAAATTTAAATTATT+TGG 0.116635 1_2:+10324504 Msa0055340:three_prime_UTR
TGAAAATGTTCTCCATATTT+TGG 0.132016 1_2:-10323852 None:intergenic
ATTATTTGGTTGCAATAAAA+AGG 0.188466 1_2:+10324518 Msa0055340:three_prime_UTR
AATGAATTTGGATGGAAATT+TGG 0.188768 1_2:+10324141 Msa0055340:three_prime_UTR
TTCAATACATCTTGGATAAA+AGG 0.227691 1_2:-10323628 None:intergenic
GAACACACACTGAATGAATT+TGG 0.237162 1_2:+10324129 Msa0055340:three_prime_UTR
GTTGAAATTGAGAAATTTAA+TGG 0.239620 1_2:+10321496 Msa0055340:CDS
CAACCAAATAATTTAAATTT+CGG 0.246816 1_2:-10324507 None:intergenic
TGGATCTCAGAAAGTTCTTT+TGG 0.252029 1_2:-10323832 None:intergenic
TTGGTTAGAAATATTTGATT+TGG 0.267686 1_2:+10324360 Msa0055340:three_prime_UTR
CTGTGTTCGGTTGTGGTTAA+AGG 0.269464 1_2:-10320355 None:intergenic
TTCTTCGAAACGGCGTCGTT+TGG 0.281601 1_2:+10321408 Msa0055340:CDS
TGCCATGCACTATCTTAAAT+TGG 0.315905 1_2:+10324259 Msa0055340:three_prime_UTR
GAAGAAGAATCAATCTCTTT+AGG 0.317856 1_2:-10321382 None:intergenic
GCAATGTCTGTCTTGGCTCT+TGG 0.327426 1_2:+10324479 Msa0055340:three_prime_UTR
ACTTTCTGAGATCCAAAATA+TGG 0.335458 1_2:+10323840 Msa0055340:CDS
CAATGTCTGTCTTGGCTCTT+GGG 0.344723 1_2:+10324480 Msa0055340:three_prime_UTR
GTGCATGGCACCTGCAACCC+TGG 0.352267 1_2:-10324246 None:intergenic
CTTAGTTTCATTTGCAGTTG+TGG 0.370514 1_2:-10323791 None:intergenic
TTGCCCTAGAGACCCACTTT+TGG 0.370556 1_2:-10323725 None:intergenic
CATCAGACACTGTTCCAAAA+AGG 0.375876 1_2:-10324167 None:intergenic
CCGGTAACGTTTGTTCGATC+TGG 0.378382 1_2:-10321300 None:intergenic
GAGGATTGAAAGAAAATAAC+AGG 0.383959 1_2:+10323979 Msa0055340:exon
GACAGTAGGGAGGGAAATAG+TGG 0.390036 1_2:+10322811 Msa0055340:CDS
CAGAAGCAACGATGAAGTTC+TGG 0.393504 1_2:+10321263 Msa0055340:intron
CTGGGCCAAGAGTTCTGATA+TGG 0.418354 1_2:+10322781 Msa0055340:CDS
TCTCTCCACAGAAGAGAAAC+AGG 0.418574 1_2:-10324039 None:intergenic
CCAGATCGAACAAACGTTAC+CGG 0.425418 1_2:+10321300 Msa0055340:CDS
AAGTTATTGCCATGATCAAT+TGG 0.434143 1_2:-10324068 None:intergenic
AAGAAGAATATGTTATCAAA+TGG 0.435300 1_2:+10321536 Msa0055340:CDS
AATTGCAAGACAAAGTTGCC+TGG 0.440049 1_2:+10322762 Msa0055340:CDS
TGGATACTCTGAAAGAGATC+AGG 0.441187 1_2:+10323896 Msa0055340:CDS
TCCTCTGCACAGTGAGACTT+TGG 0.441395 1_2:+10323954 Msa0055340:CDS
CACAACTGCAAATGAAACTA+AGG 0.463681 1_2:+10323792 Msa0055340:CDS
GAACAGTGTCTGATGGTAGA+TGG 0.469667 1_2:+10324175 Msa0055340:three_prime_UTR
TTCCCCAAAAGTGGGTCTCT+AGG 0.475364 1_2:+10323721 Msa0055340:CDS
GAAACGGCGTCGTTTGGATG+AGG 0.475372 1_2:+10321414 Msa0055340:CDS
TGATAAGTTTCTTTCTTACA+AGG 0.478308 1_2:+10321330 Msa0055340:CDS
TGCAAAATCATCATCATCTC+CGG 0.478889 1_2:-10320401 None:intergenic
TGTTTCCTGTTTCTCTTCTG+TGG 0.479255 1_2:+10324034 Msa0055340:three_prime_UTR
CAACTCCATATCAGAACTCT+TGG 0.480256 1_2:-10322786 None:intergenic
AAGAAATATGATAAGCGAAC+CGG 0.485081 1_2:+10323589 Msa0055340:CDS
TCATGGCAATAACTTGTGAT+AGG 0.490374 1_2:+10324076 Msa0055340:three_prime_UTR
ATGGCTGGTTCAATACATCT+TGG 0.493443 1_2:-10323636 None:intergenic
GGAGAAATATTTCCTATGCA+TGG 0.498396 1_2:+10324433 Msa0055340:three_prime_UTR
AGAATGGAGAAAGTATTAGC+AGG 0.504599 1_2:+10320430 Msa0055340:CDS
TCCCCAAAAGTGGGTCTCTA+GGG 0.504729 1_2:+10323722 Msa0055340:CDS
AAGTATTAGCAGGAAGGAGA+AGG 0.505776 1_2:+10320440 Msa0055340:CDS
AGCAGGAAGGAGAAGGGTCA+AGG 0.507580 1_2:+10320447 Msa0055340:CDS
TGTACAGGCAATGTCTGTCT+TGG 0.512271 1_2:+10324472 Msa0055340:three_prime_UTR
ACACACTGAATGAATTTGGA+TGG 0.515683 1_2:+10324133 Msa0055340:three_prime_UTR
GAGCCACCTTGCCACTGTAC+AGG 0.518173 1_2:+10324457 Msa0055340:three_prime_UTR
TGGAGAAAGTATTAGCAGGA+AGG 0.520845 1_2:+10320434 Msa0055340:CDS
GAAGTTTCTGTGTTCGGTTG+TGG 0.522737 1_2:-10320362 None:intergenic
GGAGTTGATGACAGTAGGGA+GGG 0.527766 1_2:+10322802 Msa0055340:CDS
ATCAGTATGCTAACAATGTG+TGG 0.530249 1_2:+10324294 Msa0055340:three_prime_UTR
AGCGAACCGGTGCACTACTT+CGG 0.531250 1_2:+10323602 Msa0055340:CDS
TCGAACAAACGTTACCGGAT+TGG 0.531970 1_2:+10321305 Msa0055340:CDS
TAGAAAAGACAATGTTGGAC+AGG 0.535144 1_2:-10324100 None:intergenic
GCACAGTGAGACTTTGGTAG+AGG 0.539946 1_2:+10323960 Msa0055340:CDS
AGAAACTTATCACGCCAATC+CGG 0.542654 1_2:-10321319 None:intergenic
TTGAAAGAAAATAACAGGAT+AGG 0.543889 1_2:+10323984 Msa0055340:exon
AGATAGTAGCCAATTGATCA+TGG 0.545141 1_2:+10324059 Msa0055340:three_prime_UTR
GCAGGAAGGAGAAGGGTCAA+GGG 0.548118 1_2:+10320448 Msa0055340:CDS
CAAACTAACTACATCAGCAC+TGG 0.554658 1_2:+10323876 Msa0055340:CDS
CAACATAGAAAAGACAATGT+TGG 0.556339 1_2:-10324105 None:intergenic
GATATGGAGTTGATGACAGT+AGG 0.558831 1_2:+10322797 Msa0055340:CDS
AGAATATGTTATCAAATGGA+AGG 0.560145 1_2:+10321540 Msa0055340:CDS
TGAAGGAGAGGTTACGAAAG+AGG 0.561251 1_2:+10321447 Msa0055340:CDS
GGATACTCTGAAAGAGATCA+GGG 0.567654 1_2:+10323897 Msa0055340:CDS
CATATCAGAACTCTTGGCCC+AGG 0.567662 1_2:-10322780 None:intergenic
GATGAGGATGGTGGTGCTGA+AGG 0.568091 1_2:+10321430 Msa0055340:CDS
TGCATGGCACCTGCAACCCT+GGG 0.568153 1_2:-10324245 None:intergenic
TGGAGTTGATGACAGTAGGG+AGG 0.576482 1_2:+10322801 Msa0055340:CDS
ATTGCAAGACAAAGTTGCCT+GGG 0.577637 1_2:+10322763 Msa0055340:CDS
TCAGTATGCTAACAATGTGT+GGG 0.581205 1_2:+10324295 Msa0055340:three_prime_UTR
TGCCAATTTAAGATAGTGCA+TGG 0.589405 1_2:-10324261 None:intergenic
AGTATTAGCAGGAAGGAGAA+GGG 0.595807 1_2:+10320441 Msa0055340:CDS
CAAGGTGGCTCTCCATGCAT+AGG 0.596441 1_2:-10324445 None:intergenic
GCAATCCTTGTCAACTAGTG+AGG 0.598101 1_2:+10323744 Msa0055340:CDS
ATATGGAGTTGATGACAGTA+GGG 0.604313 1_2:+10322798 Msa0055340:CDS
AAAGTCTCACTGTGCAGAGG+AGG 0.607575 1_2:-10323952 None:intergenic
CGGCGTCGTTTGGATGAGGA+TGG 0.613998 1_2:+10321418 Msa0055340:CDS
ACCAAAGTCTCACTGTGCAG+AGG 0.620459 1_2:-10323955 None:intergenic
AGGTAACCGAAGTAGTGCAC+CGG 0.636993 1_2:-10323608 None:intergenic
ACATTGCCTGTACAGTGGCA+AGG 0.645624 1_2:-10324463 None:intergenic
TGTGCTTAACAAGCTTGTGA+AGG 0.649462 1_2:+10323672 Msa0055340:CDS
TATAGTGCACTTAACTACAC+AGG 0.649872 1_2:+10322866 Msa0055340:CDS
CGTCGTTTGGATGAGGATGG+TGG 0.657509 1_2:+10321421 Msa0055340:CDS
GGATGGTGGTGCTGAAGGAG+AGG 0.662335 1_2:+10321435 Msa0055340:CDS
ACTCTGAAAGAGATCAGGGG+TGG 0.668669 1_2:+10323901 Msa0055340:CDS
GACAGACATTGCCTGTACAG+TGG 0.680239 1_2:-10324468 None:intergenic
CAAGCTTGTGAAGGAGTGTG+AGG 0.691985 1_2:+10323681 Msa0055340:CDS
TTGCCTGTACAGTGGCAAGG+TGG 0.705772 1_2:-10324460 None:intergenic
GATACTCTGAAAGAGATCAG+GGG 0.742895 1_2:+10323898 Msa0055340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAGGTAAATAAAAAAA+TGG - chr1_2:10321072-10321091 None:intergenic 10.0%
!!! TTTTATTTATATCAAACATT+TGG + chr1_2:10324341-10324360 Msa0055340:three_prime_UTR 10.0%
!! AAAATTATATATATGGAAGT+GGG - chr1_2:10321099-10321118 None:intergenic 15.0%
!! AAGTGTGAAAATTATATATA+TGG - chr1_2:10321106-10321125 None:intergenic 15.0%
!!! AATAATGATAATGAGTAATT+TGG - chr1_2:10321137-10321156 None:intergenic 15.0%
!!! TTTTTAACTTTAATCGATTA+TGG + chr1_2:10321567-10321586 Msa0055340:intron 15.0%
!!! TAATTTTTTTTGCTGTAATA+TGG + chr1_2:10321602-10321621 Msa0055340:intron 15.0%
!!! TACTTTTTTTTTTTACTAGT+AGG - chr1_2:10322476-10322495 None:intergenic 15.0%
!! TTCTCATATTATAAATGATA+GGG - chr1_2:10323069-10323088 None:intergenic 15.0%
!!! TAATAATATAAAATTTTCCC+AGG + chr1_2:10324228-10324247 Msa0055340:three_prime_UTR 15.0%
!!! AATAATATAAAATTTTCCCA+GGG + chr1_2:10324229-10324248 Msa0055340:three_prime_UTR 15.0%
!!! ACTTTGATATTATTTTTGTT+TGG + chr1_2:10324412-10324431 Msa0055340:three_prime_UTR 15.0%
!! AAACCGAAATTTAAATTATT+TGG + chr1_2:10324504-10324523 Msa0055340:three_prime_UTR 15.0%
!! CAACCAAATAATTTAAATTT+CGG - chr1_2:10324510-10324529 None:intergenic 15.0%
!! TTGATATTTGACATAATTGA+GGG + chr1_2:10320723-10320742 Msa0055340:intron 20.0%
!!! AAAATTTAAGACGAATTTGA+TGG + chr1_2:10320766-10320785 Msa0055340:intron 20.0%
!! ATATTCAGGTAATAATAGTT+AGG - chr1_2:10320839-10320858 None:intergenic 20.0%
!! TATATTTCGAACACAAAAAT+AGG + chr1_2:10320856-10320875 Msa0055340:intron 20.0%
!! CATATAGAATATTCTATATC+CGG + chr1_2:10321044-10321063 Msa0055340:intron 20.0%
!! AAATTATATATATGGAAGTG+GGG - chr1_2:10321098-10321117 None:intergenic 20.0%
!! GAAAATTATATATATGGAAG+TGG - chr1_2:10321100-10321119 None:intergenic 20.0%
!! GTTGAAATTGAGAAATTTAA+TGG + chr1_2:10321496-10321515 Msa0055340:CDS 20.0%
!! AAGAAGAATATGTTATCAAA+TGG + chr1_2:10321536-10321555 Msa0055340:CDS 20.0%
!! ATTTGACAAAACTATAATCT+TGG - chr1_2:10321683-10321702 None:intergenic 20.0%
!!! ATCCAATGTATCATTATTTT+TGG + chr1_2:10321911-10321930 Msa0055340:intron 20.0%
!! GTTCTCATATTATAAATGAT+AGG - chr1_2:10323070-10323089 None:intergenic 20.0%
!! TAAACACAATATAATCAGAT+AGG + chr1_2:10323436-10323455 Msa0055340:intron 20.0%
!! TTGGTTAGAAATATTTGATT+TGG + chr1_2:10324360-10324379 Msa0055340:three_prime_UTR 20.0%
!! ATTATTTGGTTGCAATAAAA+AGG + chr1_2:10324518-10324537 Msa0055340:three_prime_UTR 20.0%
! TAAAACTGAAAAGTGAAAAC+TGG + chr1_2:10320548-10320567 Msa0055340:intron 25.0%
! GTTGATATTTGACATAATTG+AGG + chr1_2:10320722-10320741 Msa0055340:intron 25.0%
!! AAATTCGTCTTAAATTTTCG+CGG - chr1_2:10320764-10320783 None:intergenic 25.0%
! TTTGTGTTCGAAATATATTC+AGG - chr1_2:10320853-10320872 None:intergenic 25.0%
!!! CTTCTTCTAACCTTTTTTAT+CGG - chr1_2:10320986-10321005 None:intergenic 25.0%
! TTCTATATGGAGAAGAATAA+TGG - chr1_2:10321033-10321052 None:intergenic 25.0%
! CGGATATAGAATATTCTATA+TGG - chr1_2:10321046-10321065 None:intergenic 25.0%
! GGTAAATAAAAAAATGGTTC+CGG - chr1_2:10321066-10321085 None:intergenic 25.0%
! TGATAAGTTTCTTTCTTACA+AGG + chr1_2:10321330-10321349 Msa0055340:CDS 25.0%
!! AAGAGGTTAATGATTTTCTT+AGG + chr1_2:10321464-10321483 Msa0055340:CDS 25.0%
!!! TAATGATTTTCTTAGGTTGT+TGG + chr1_2:10321471-10321490 Msa0055340:CDS 25.0%
! AGAATATGTTATCAAATGGA+AGG + chr1_2:10321540-10321559 Msa0055340:CDS 25.0%
! CTCAAATTATTAACATGTGT+CGG - chr1_2:10321772-10321791 None:intergenic 25.0%
! ACAATTTAGATCAGAATTGT+CGG + chr1_2:10321838-10321857 Msa0055340:intron 25.0%
! AAGCATCATAGATTATGAAA+TGG - chr1_2:10321886-10321905 None:intergenic 25.0%
! CTCCAAAAATAATGATACAT+TGG - chr1_2:10321916-10321935 None:intergenic 25.0%
! CAAAAACTTCAACAAAATCA+TGG - chr1_2:10321969-10321988 None:intergenic 25.0%
! ACCTTAAATATCAATGAATG+TGG + chr1_2:10322074-10322093 Msa0055340:intron 25.0%
! TCCACATTCATTGATATTTA+AGG - chr1_2:10322078-10322097 None:intergenic 25.0%
! AGAATGTATGAATCTTAACA+TGG + chr1_2:10322117-10322136 Msa0055340:intron 25.0%
! GAATGTATGAATCTTAACAT+GGG + chr1_2:10322118-10322137 Msa0055340:intron 25.0%
!!! CATATATTGTATTTCTGGAA+AGG + chr1_2:10322191-10322210 Msa0055340:intron 25.0%
!! AATACGTATAATTTTACCAC+TGG + chr1_2:10322385-10322404 Msa0055340:intron 25.0%
!! ATACGTATAATTTTACCACT+GGG + chr1_2:10322386-10322405 Msa0055340:intron 25.0%
! TACAATATACTTTGCAAATG+AGG - chr1_2:10322987-10323006 None:intergenic 25.0%
!!! GTTTTAGGGGTATTAATTAA+TGG + chr1_2:10323170-10323189 Msa0055340:intron 25.0%
!! ACCATATTTTGCAAATAAGA+TGG + chr1_2:10323281-10323300 Msa0055340:intron 25.0%
! TATAATCAGATAGGAAAACT+AGG + chr1_2:10323445-10323464 Msa0055340:intron 25.0%
! ATAATCAGATAGGAAAACTA+GGG + chr1_2:10323446-10323465 Msa0055340:intron 25.0%
! TTCAATACATCTTGGATAAA+AGG - chr1_2:10323631-10323650 None:intergenic 25.0%
!! TGAAAATGTTCTCCATATTT+TGG - chr1_2:10323855-10323874 None:intergenic 25.0%
! TTGAAAGAAAATAACAGGAT+AGG + chr1_2:10323984-10324003 Msa0055340:exon 25.0%
! AATGAATTTGGATGGAAATT+TGG + chr1_2:10324141-10324160 Msa0055340:three_prime_UTR 25.0%
!!! GTTTTTGAAGTTTCTGTGTT+CGG - chr1_2:10320371-10320390 None:intergenic 30.0%
TTCAAAAACATGAGAATCAC+CGG + chr1_2:10320382-10320401 Msa0055340:CDS 30.0%
! ATATTTCTGAGTGAAATGTG+AGG + chr1_2:10320477-10320496 Msa0055340:intron 30.0%
TTGTTAGACGTCTATCAAAA+AGG - chr1_2:10320689-10320708 None:intergenic 30.0%
ACATAATTGAGGGACAAATA+TGG + chr1_2:10320733-10320752 Msa0055340:intron 30.0%
GGTTCACTCAAAAAAAATTG+CGG + chr1_2:10320787-10320806 Msa0055340:intron 30.0%
ACAAAAACCACCGATAAAAA+AGG + chr1_2:10320973-10320992 Msa0055340:intron 30.0%
GAAGAAGAATCAATCTCTTT+AGG - chr1_2:10321385-10321404 None:intergenic 30.0%
TTGAGTTTGAAGAAATCAAG+TGG + chr1_2:10321941-10321960 Msa0055340:intron 30.0%
! TGAAGTTTTTGCTACAATCA+CGG + chr1_2:10321978-10321997 Msa0055340:intron 30.0%
!! ATGCAGTTAGTGGATTAAAT+AGG + chr1_2:10322042-10322061 Msa0055340:intron 30.0%
!! TGCAGTTAGTGGATTAAATA+GGG + chr1_2:10322043-10322062 Msa0055340:intron 30.0%
GTCAGCATATATTGTATTTC+TGG + chr1_2:10322186-10322205 Msa0055340:intron 30.0%
! TTAGCAATCTTTTCTGATCT+TGG + chr1_2:10322238-10322257 Msa0055340:intron 30.0%
! TAGCAATCTTTTCTGATCTT+GGG + chr1_2:10322239-10322258 Msa0055340:intron 30.0%
AACTTATCCTCGAAGTAAAA+TGG + chr1_2:10322292-10322311 Msa0055340:intron 30.0%
! TAATAGTCCATTTTACTTCG+AGG - chr1_2:10322302-10322321 None:intergenic 30.0%
! TACGTATAATTTTACCACTG+GGG + chr1_2:10322387-10322406 Msa0055340:intron 30.0%
! CTTGTCTGTGTTGTAAATTT+TGG + chr1_2:10322434-10322453 Msa0055340:intron 30.0%
ACTCGGCTAAAATACATTTA+CGG - chr1_2:10322515-10322534 None:intergenic 30.0%
CTTCTAGTCATAAAATCACT+CGG - chr1_2:10322532-10322551 None:intergenic 30.0%
TCTTAGAAATAGAATACGCT+GGG - chr1_2:10322716-10322735 None:intergenic 30.0%
TTCTTAGAAATAGAATACGC+TGG - chr1_2:10322717-10322736 None:intergenic 30.0%
! ACAAATTCCTTTTGCATCAT+AGG + chr1_2:10322925-10322944 Msa0055340:intron 30.0%
TTACTATCCTATGATGCAAA+AGG - chr1_2:10322935-10322954 None:intergenic 30.0%
CATCATAGGATAGTAACATA+TGG + chr1_2:10322939-10322958 Msa0055340:intron 30.0%
AATGATAATTCAGTCCTTAG+AGG - chr1_2:10323113-10323132 None:intergenic 30.0%
! TGCAAATGAGTTACAGTTTT+AGG + chr1_2:10323155-10323174 Msa0055340:intron 30.0%
! GCAAATGAGTTACAGTTTTA+GGG + chr1_2:10323156-10323175 Msa0055340:intron 30.0%
!! CAAATGAGTTACAGTTTTAG+GGG + chr1_2:10323157-10323176 Msa0055340:intron 30.0%
! GCCATCTTATTTGCAAAATA+TGG - chr1_2:10323285-10323304 None:intergenic 30.0%
! TATTCTTGTTTGTCAGTAGA+TGG + chr1_2:10323390-10323409 Msa0055340:intron 30.0%
GTTGCATAAAATCAAGTGAA+TGG + chr1_2:10323412-10323431 Msa0055340:intron 30.0%
GAAAGATGATTTCTTTGACT+AGG + chr1_2:10323486-10323505 Msa0055340:intron 30.0%
ATGATTTCTTTGACTAGGTT+GGG + chr1_2:10323491-10323510 Msa0055340:intron 30.0%
AAGAAATATGATAAGCGAAC+CGG + chr1_2:10323589-10323608 Msa0055340:CDS 30.0%
!! ACTTTCTGAGATCCAAAATA+TGG + chr1_2:10323840-10323859 Msa0055340:CDS 30.0%
GAGGATTGAAAGAAAATAAC+AGG + chr1_2:10323979-10323998 Msa0055340:exon 30.0%
AAGTTATTGCCATGATCAAT+TGG - chr1_2:10324071-10324090 None:intergenic 30.0%
CAACATAGAAAAGACAATGT+TGG - chr1_2:10324108-10324127 None:intergenic 30.0%
TGCAAAATCATCATCATCTC+CGG - chr1_2:10320404-10320423 None:intergenic 35.0%
!! AGATGATGATGATTTTGCAG+AGG + chr1_2:10320405-10320424 Msa0055340:CDS 35.0%
!! AGAATGGAGAAAGTATTAGC+AGG + chr1_2:10320430-10320449 Msa0055340:CDS 35.0%
! AGGACTAATTTGATGGATAG+TGG - chr1_2:10320581-10320600 None:intergenic 35.0%
GTGTTCAAGGACTAATTTGA+TGG - chr1_2:10320588-10320607 None:intergenic 35.0%
! ATGGCTAATGAAGTACTTGA+CGG + chr1_2:10320658-10320677 Msa0055340:intron 35.0%
!!! CTTCTAACCTTTTTTATCGG+TGG - chr1_2:10320983-10321002 None:intergenic 35.0%
ATGGAAGTGGGGATTTAAAA+AGG - chr1_2:10321087-10321106 None:intergenic 35.0%
!! AACGGTGTTTTGAATGGTTA+AGG - chr1_2:10321171-10321190 None:intergenic 35.0%
CTTCTTCTTCTTCTTCGAAA+CGG + chr1_2:10321398-10321417 Msa0055340:CDS 35.0%
!! TGATTTTCTTAGGTTGTTGG+AGG + chr1_2:10321474-10321493 Msa0055340:CDS 35.0%
TAATCCACTAACTGCATGAT+CGG - chr1_2:10322039-10322058 None:intergenic 35.0%
!! GCAGTTAGTGGATTAAATAG+GGG + chr1_2:10322044-10322063 Msa0055340:intron 35.0%
TATCAATGAATGTGGAACAG+AGG + chr1_2:10322082-10322101 Msa0055340:intron 35.0%
ATCAATGAATGTGGAACAGA+GGG + chr1_2:10322083-10322102 Msa0055340:intron 35.0%
TGCTGACAATTGACAAAGAA+AGG - chr1_2:10322173-10322192 None:intergenic 35.0%
AGGTGAAAATTGCAGACATA+TGG - chr1_2:10322636-10322655 None:intergenic 35.0%
!! ACTTCTTATGTTTGCTATGC+AGG + chr1_2:10322739-10322758 Msa0055340:intron 35.0%
!! ATATGGAGTTGATGACAGTA+GGG + chr1_2:10322798-10322817 Msa0055340:CDS 35.0%
!!! AGGGAAATAGTGGATTTTCA+TGG + chr1_2:10322821-10322840 Msa0055340:CDS 35.0%
TATAGTGCACTTAACTACAC+AGG + chr1_2:10322866-10322885 Msa0055340:CDS 35.0%
TCGCTTAAAATTCATGCACA+GGG - chr1_2:10322906-10322925 None:intergenic 35.0%
TCATATGCTCAACTTAAACG+CGG - chr1_2:10323010-10323029 None:intergenic 35.0%
GAACCAATGAGAAATGAGTT+TGG + chr1_2:10323086-10323105 Msa0055340:intron 35.0%
TTGCATTTCTAAACTGAGTC+AGG + chr1_2:10323332-10323351 Msa0055340:intron 35.0%
TGCATTTCTAAACTGAGTCA+GGG + chr1_2:10323333-10323352 Msa0055340:intron 35.0%
GATGATTTCTTTGACTAGGT+TGG + chr1_2:10323490-10323509 Msa0055340:intron 35.0%
!!! AGCACATCGATTTTGAAGAA+TGG - chr1_2:10323658-10323677 None:intergenic 35.0%
! AGCATTATTTTCCCCAAAAG+TGG + chr1_2:10323712-10323731 Msa0055340:CDS 35.0%
! GCATTATTTTCCCCAAAAGT+GGG + chr1_2:10323713-10323732 Msa0055340:CDS 35.0%
AAAAACCTCACTAGTTGACA+AGG - chr1_2:10323752-10323771 None:intergenic 35.0%
CTTAGTTTCATTTGCAGTTG+TGG - chr1_2:10323794-10323813 None:intergenic 35.0%
CACAACTGCAAATGAAACTA+AGG + chr1_2:10323792-10323811 Msa0055340:CDS 35.0%
! GGATCTCAGAAAGTTCTTTT+GGG - chr1_2:10323834-10323853 None:intergenic 35.0%
! TGGATCTCAGAAAGTTCTTT+TGG - chr1_2:10323835-10323854 None:intergenic 35.0%
AGATAGTAGCCAATTGATCA+TGG + chr1_2:10324059-10324078 Msa0055340:three_prime_UTR 35.0%
! TCATGGCAATAACTTGTGAT+AGG + chr1_2:10324076-10324095 Msa0055340:three_prime_UTR 35.0%
TAGAAAAGACAATGTTGGAC+AGG - chr1_2:10324103-10324122 None:intergenic 35.0%
GAACACACACTGAATGAATT+TGG + chr1_2:10324129-10324148 Msa0055340:three_prime_UTR 35.0%
ACACACTGAATGAATTTGGA+TGG + chr1_2:10324133-10324152 Msa0055340:three_prime_UTR 35.0%
TGCCATGCACTATCTTAAAT+TGG + chr1_2:10324259-10324278 Msa0055340:three_prime_UTR 35.0%
! TGCCAATTTAAGATAGTGCA+TGG - chr1_2:10324264-10324283 None:intergenic 35.0%
ATCAGTATGCTAACAATGTG+TGG + chr1_2:10324294-10324313 Msa0055340:three_prime_UTR 35.0%
TCAGTATGCTAACAATGTGT+GGG + chr1_2:10324295-10324314 Msa0055340:three_prime_UTR 35.0%
GGAGAAATATTTCCTATGCA+TGG + chr1_2:10324433-10324452 Msa0055340:three_prime_UTR 35.0%
! TGATTTTGCAGAGGTGAGAA+TGG + chr1_2:10320414-10320433 Msa0055340:CDS 40.0%
!! TGGAGAAAGTATTAGCAGGA+AGG + chr1_2:10320434-10320453 Msa0055340:CDS 40.0%
AAGTATTAGCAGGAAGGAGA+AGG + chr1_2:10320440-10320459 Msa0055340:CDS 40.0%
AGTATTAGCAGGAAGGAGAA+GGG + chr1_2:10320441-10320460 Msa0055340:CDS 40.0%
TTCTGAGTGAAATGTGAGGA+AGG + chr1_2:10320481-10320500 Msa0055340:intron 40.0%
! AAATGTGAGGAAGGAGGTAT+GGG + chr1_2:10320490-10320509 Msa0055340:intron 40.0%
! AAGGAGGTATGGGTAATACA+GGG + chr1_2:10320500-10320519 Msa0055340:intron 40.0%
CAAATTAGTCCTTGAACACG+TGG + chr1_2:10320589-10320608 Msa0055340:intron 40.0%
! CTAATGAAGTACTTGACGGA+GGG + chr1_2:10320662-10320681 Msa0055340:intron 40.0%
! CGTCTTAAATTTTCGCGGAT+CGG - chr1_2:10320759-10320778 None:intergenic 40.0%
!! AAACGCAACGGTGTTTTGAA+TGG - chr1_2:10321177-10321196 None:intergenic 40.0%
AGAAACTTATCACGCCAATC+CGG - chr1_2:10321322-10321341 None:intergenic 40.0%
AAATCCGATCATGCAGTTAG+TGG + chr1_2:10322032-10322051 Msa0055340:intron 40.0%
TCAATGAATGTGGAACAGAG+GGG + chr1_2:10322084-10322103 Msa0055340:intron 40.0%
! TTTTCTGATCTTGGGACTGT+TGG + chr1_2:10322247-10322266 Msa0055340:intron 40.0%
!! AAGTTGGTGTATGCAGAACA+AGG - chr1_2:10322656-10322675 None:intergenic 40.0%
TCTCTGTGACATGGAAAAGT+TGG - chr1_2:10322672-10322691 None:intergenic 40.0%
AATTGCAAGACAAAGTTGCC+TGG + chr1_2:10322762-10322781 Msa0055340:CDS 40.0%
ATTGCAAGACAAAGTTGCCT+GGG + chr1_2:10322763-10322782 Msa0055340:CDS 40.0%
CAACTCCATATCAGAACTCT+TGG - chr1_2:10322789-10322808 None:intergenic 40.0%
!! GATATGGAGTTGATGACAGT+AGG + chr1_2:10322797-10322816 Msa0055340:CDS 40.0%
!! AGTGGATTTTCATGGAGAGA+TGG + chr1_2:10322829-10322848 Msa0055340:CDS 40.0%
GTCGCTTAAAATTCATGCAC+AGG - chr1_2:10322907-10322926 None:intergenic 40.0%
GGTCCAAACTCATTTCTCAT+TGG - chr1_2:10323092-10323111 None:intergenic 40.0%
GAAATGAGTTTGGACCTCTA+AGG + chr1_2:10323096-10323115 Msa0055340:intron 40.0%
ATAGGAAAACTAGGGTGTGT+AGG + chr1_2:10323454-10323473 Msa0055340:intron 40.0%
TCTTCTCTCATTCTTTGTGC+AGG + chr1_2:10323550-10323569 Msa0055340:intron 40.0%
TCTCATTCTTTGTGCAGGTT+TGG + chr1_2:10323555-10323574 Msa0055340:intron 40.0%
! ATGGCTGGTTCAATACATCT+TGG - chr1_2:10323639-10323658 None:intergenic 40.0%
!!! CATCGATTTTGAAGAATGGC+TGG - chr1_2:10323654-10323673 None:intergenic 40.0%
TGTGCTTAACAAGCTTGTGA+AGG + chr1_2:10323672-10323691 Msa0055340:CDS 40.0%
! GTCAACTAGTGAGGTTTTTG+AGG + chr1_2:10323753-10323772 Msa0055340:CDS 40.0%
!!! CAGAAAGTTCTTTTGGGACA+TGG - chr1_2:10323828-10323847 None:intergenic 40.0%
CAAACTAACTACATCAGCAC+TGG + chr1_2:10323876-10323895 Msa0055340:CDS 40.0%
! TGGATACTCTGAAAGAGATC+AGG + chr1_2:10323896-10323915 Msa0055340:CDS 40.0%
! GGATACTCTGAAAGAGATCA+GGG + chr1_2:10323897-10323916 Msa0055340:CDS 40.0%
! GATACTCTGAAAGAGATCAG+GGG + chr1_2:10323898-10323917 Msa0055340:CDS 40.0%
! TGTTTCCTGTTTCTCTTCTG+TGG + chr1_2:10324034-10324053 Msa0055340:three_prime_UTR 40.0%
! TGGAAATTTGGCCTCCTTTT+TGG + chr1_2:10324153-10324172 Msa0055340:three_prime_UTR 40.0%
CATCAGACACTGTTCCAAAA+AGG - chr1_2:10324170-10324189 None:intergenic 40.0%
!!! CTTTTTGGAACAGTGTCTGA+TGG + chr1_2:10324168-10324187 Msa0055340:three_prime_UTR 40.0%
! TAAAATTTTCCCAGGGTTGC+AGG + chr1_2:10324236-10324255 Msa0055340:three_prime_UTR 40.0%
CTGTGTTCGGTTGTGGTTAA+AGG - chr1_2:10320358-10320377 None:intergenic 45.0%
GAAGTTTCTGTGTTCGGTTG+TGG - chr1_2:10320365-10320384 None:intergenic 45.0%
TGAGTGAAATGTGAGGAAGG+AGG + chr1_2:10320484-10320503 Msa0055340:intron 45.0%
GAAATGTGAGGAAGGAGGTA+TGG + chr1_2:10320489-10320508 Msa0055340:intron 45.0%
! GAAGGAGGTATGGGTAATAC+AGG + chr1_2:10320499-10320518 Msa0055340:intron 45.0%
! AGGAGGTATGGGTAATACAG+GGG + chr1_2:10320501-10320520 Msa0055340:intron 45.0%
AAAAGGAAGCCACGTGTTCA+AGG - chr1_2:10320601-10320620 None:intergenic 45.0%
TGTCTTGTACACGTGGCAAA+AGG - chr1_2:10320618-10320637 None:intergenic 45.0%
CACGTGTACAAGACAACACA+GGG + chr1_2:10320623-10320642 Msa0055340:intron 45.0%
CACAGGGCAACATATCAACA+TGG + chr1_2:10320639-10320658 Msa0055340:intron 45.0%
! GCTAATGAAGTACTTGACGG+AGG + chr1_2:10320661-10320680 Msa0055340:intron 45.0%
AGAGAAGAAAGAGCAGCACA+AGG + chr1_2:10320898-10320917 Msa0055340:intron 45.0%
ATCGCGTTTACGAAACGCAA+CGG - chr1_2:10321189-10321208 None:intergenic 45.0%
CAGAAGCAACGATGAAGTTC+TGG + chr1_2:10321263-10321282 Msa0055340:intron 45.0%
CCAGATCGAACAAACGTTAC+CGG + chr1_2:10321300-10321319 Msa0055340:CDS 45.0%
TCGAACAAACGTTACCGGAT+TGG + chr1_2:10321305-10321324 Msa0055340:CDS 45.0%
TGAAGGAGAGGTTACGAAAG+AGG + chr1_2:10321447-10321466 Msa0055340:CDS 45.0%
CAATGAATGTGGAACAGAGG+GGG + chr1_2:10322085-10322104 Msa0055340:intron 45.0%
GCAATCCTTGTCAACTAGTG+AGG + chr1_2:10323744-10323763 Msa0055340:CDS 45.0%
TCTCTCCACAGAAGAGAAAC+AGG - chr1_2:10324042-10324061 None:intergenic 45.0%
CAGACACTGTTCCAAAAAGG+AGG - chr1_2:10324167-10324186 None:intergenic 45.0%
GAACAGTGTCTGATGGTAGA+TGG + chr1_2:10324175-10324194 Msa0055340:three_prime_UTR 45.0%
TGTACAGGCAATGTCTGTCT+TGG + chr1_2:10324472-10324491 Msa0055340:three_prime_UTR 45.0%
! CAATGTCTGTCTTGGCTCTT+GGG + chr1_2:10324480-10324499 Msa0055340:three_prime_UTR 45.0%
!!! ATTTTATATTATTAAGAAAA+AGG - chr1_2:10324222-10324241 None:intergenic 5.0%
CCTGTGTTGTCTTGTACACG+TGG - chr1_2:10320625-10320644 None:intergenic 50.0%
CCACGTGTACAAGACAACAC+AGG + chr1_2:10320622-10320641 Msa0055340:intron 50.0%
CCGGTAACGTTTGTTCGATC+TGG - chr1_2:10321303-10321322 None:intergenic 50.0%
TTCTTCGAAACGGCGTCGTT+TGG + chr1_2:10321408-10321427 Msa0055340:CDS 50.0%
CATGGGTCGTTGTTTGCTCT+TGG + chr1_2:10322135-10322154 Msa0055340:intron 50.0%
TCTGATCTTGGGACTGTTGG+TGG + chr1_2:10322250-10322269 Msa0055340:intron 50.0%
! ATCTTGGGACTGTTGGTGGA+AGG + chr1_2:10322254-10322273 Msa0055340:intron 50.0%
CAACACAGACAAGACGCATC+AGG - chr1_2:10322427-10322446 None:intergenic 50.0%
AGACGTGACTCCTTGAGATG+TGG + chr1_2:10322689-10322708 Msa0055340:intron 50.0%
CATATCAGAACTCTTGGCCC+AGG - chr1_2:10322783-10322802 None:intergenic 50.0%
! CTGGGCCAAGAGTTCTGATA+TGG + chr1_2:10322781-10322800 Msa0055340:CDS 50.0%
!! TGGAGTTGATGACAGTAGGG+AGG + chr1_2:10322801-10322820 Msa0055340:CDS 50.0%
!! GGAGTTGATGACAGTAGGGA+GGG + chr1_2:10322802-10322821 Msa0055340:CDS 50.0%
GACAGTAGGGAGGGAAATAG+TGG + chr1_2:10322811-10322830 Msa0055340:CDS 50.0%
ACTAGGGTGTGTAGGACAGT+AGG + chr1_2:10323462-10323481 Msa0055340:intron 50.0%
AGGTAACCGAAGTAGTGCAC+CGG - chr1_2:10323611-10323630 None:intergenic 50.0%
! CAAGCTTGTGAAGGAGTGTG+AGG + chr1_2:10323681-10323700 Msa0055340:CDS 50.0%
TTCCCCAAAAGTGGGTCTCT+AGG + chr1_2:10323721-10323740 Msa0055340:CDS 50.0%
TCCCCAAAAGTGGGTCTCTA+GGG + chr1_2:10323722-10323741 Msa0055340:CDS 50.0%
!! TGCCCTAGAGACCCACTTTT+GGG - chr1_2:10323727-10323746 None:intergenic 50.0%
! TTGCCCTAGAGACCCACTTT+TGG - chr1_2:10323728-10323747 None:intergenic 50.0%
! ACTCTGAAAGAGATCAGGGG+TGG + chr1_2:10323901-10323920 Msa0055340:CDS 50.0%
AAAGTCTCACTGTGCAGAGG+AGG - chr1_2:10323955-10323974 None:intergenic 50.0%
TCCTCTGCACAGTGAGACTT+TGG + chr1_2:10323954-10323973 Msa0055340:CDS 50.0%
ACCAAAGTCTCACTGTGCAG+AGG - chr1_2:10323958-10323977 None:intergenic 50.0%
GCACAGTGAGACTTTGGTAG+AGG + chr1_2:10323960-10323979 Msa0055340:CDS 50.0%
ACATTGCCTGTACAGTGGCA+AGG - chr1_2:10324466-10324485 None:intergenic 50.0%
GACAGACATTGCCTGTACAG+TGG - chr1_2:10324471-10324490 None:intergenic 50.0%
! GCAATGTCTGTCTTGGCTCT+TGG + chr1_2:10324479-10324498 Msa0055340:three_prime_UTR 50.0%
AGCAGGAAGGAGAAGGGTCA+AGG + chr1_2:10320447-10320466 Msa0055340:CDS 55.0%
GCAGGAAGGAGAAGGGTCAA+GGG + chr1_2:10320448-10320467 Msa0055340:CDS 55.0%
GAAACGGCGTCGTTTGGATG+AGG + chr1_2:10321414-10321433 Msa0055340:CDS 55.0%
CGTCGTTTGGATGAGGATGG+TGG + chr1_2:10321421-10321440 Msa0055340:CDS 55.0%
! GATGAGGATGGTGGTGCTGA+AGG + chr1_2:10321430-10321449 Msa0055340:CDS 55.0%
GGGTCGTTGTTTGCTCTTGG+TGG + chr1_2:10322138-10322157 Msa0055340:intron 55.0%
CAAGACGCATCAGGCCCTTT+GGG - chr1_2:10322418-10322437 None:intergenic 55.0%
ACAAGACGCATCAGGCCCTT+TGG - chr1_2:10322419-10322438 None:intergenic 55.0%
GGAGTCACGTCTCTGTGACA+TGG - chr1_2:10322681-10322700 None:intergenic 55.0%
TACGCTGGGTCCACATCTCA+AGG - chr1_2:10322702-10322721 None:intergenic 55.0%
AGCGAACCGGTGCACTACTT+CGG + chr1_2:10323602-10323621 Msa0055340:CDS 55.0%
!! GCCCTAGAGACCCACTTTTG+GGG - chr1_2:10323726-10323745 None:intergenic 55.0%
CAAGGTGGCTCTCCATGCAT+AGG - chr1_2:10324448-10324467 None:intergenic 55.0%
TTGCCTGTACAGTGGCAAGG+TGG - chr1_2:10324463-10324482 None:intergenic 55.0%
CGGCGTCGTTTGGATGAGGA+TGG + chr1_2:10321418-10321437 Msa0055340:CDS 60.0%
! GGATGGTGGTGCTGAAGGAG+AGG + chr1_2:10321435-10321454 Msa0055340:CDS 60.0%
ACCACTGGGGTCTAGCCCAA+AGG + chr1_2:10322400-10322419 Msa0055340:intron 60.0%
CCACTGGGGTCTAGCCCAAA+GGG + chr1_2:10322401-10322420 Msa0055340:intron 60.0%
TGCATGGCACCTGCAACCCT+GGG - chr1_2:10324248-10324267 None:intergenic 60.0%
GAGCCACCTTGCCACTGTAC+AGG + chr1_2:10324457-10324476 Msa0055340:three_prime_UTR 60.0%
! CCCTTTGGGCTAGACCCCAG+TGG - chr1_2:10322404-10322423 None:intergenic 65.0%
GTGCATGGCACCTGCAACCC+TGG - chr1_2:10324249-10324268 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 10320349 10324557 10320349 ID=Msa0055340;Name=Msa0055340
chr1_2 mRNA 10320349 10324557 10320349 ID=Msa0055340-mRNA-1;Parent=Msa0055340;Name=Msa0055340-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.66|0.5|0.75|1|1|4|570|319
chr1_2 exon 10320349 10320469 10320349 ID=Msa0055340-mRNA-1:exon:3865;Parent=Msa0055340-mRNA-1
chr1_2 exon 10321266 10321561 10321266 ID=Msa0055340-mRNA-1:exon:3866;Parent=Msa0055340-mRNA-1
chr1_2 exon 10322761 10322887 10322761 ID=Msa0055340-mRNA-1:exon:3867;Parent=Msa0055340-mRNA-1
chr1_2 exon 10323572 10324557 10323572 ID=Msa0055340-mRNA-1:exon:3868;Parent=Msa0055340-mRNA-1
chr1_2 CDS 10320349 10320469 10320349 ID=Msa0055340-mRNA-1:cds;Parent=Msa0055340-mRNA-1
chr1_2 CDS 10321266 10321561 10321266 ID=Msa0055340-mRNA-1:cds;Parent=Msa0055340-mRNA-1
chr1_2 CDS 10322761 10322887 10322761 ID=Msa0055340-mRNA-1:cds;Parent=Msa0055340-mRNA-1
chr1_2 CDS 10323572 10323987 10323572 ID=Msa0055340-mRNA-1:cds;Parent=Msa0055340-mRNA-1
chr1_2 three_prime_UTR 10323988 10324557 10323988 ID=Msa0055340-mRNA-1:three_prime_utr;Parent=Msa0055340-mRNA-1
Gene Sequence

>Msa0055340

ATGTTACCTTTAACCACAACCGAACACAGAAACTTCAAAAACATGAGAATCACCGGAGATGATGATGATTTTGCAGAGGTGAGAATGGAGAAAGTATTAGCAGGAAGGAGAAGGGTCAAGGAAGCAACGATGAAGTTCTGGAAGATTCTCAACAACCAGATCGAACAAACGTTACCGGATTGGCGTGATAAGTTTCTTTCTTACAAGGATCTTAAGAAACAGTTAAAACTCATTGTTCCTAAAGAGATTGATTCTTCTTCTTCTTCTTCGAAACGGCGTCGTTTGGATGAGGATGGTGGTGCTGAAGGAGAGGTTACGAAAGAGGTTAATGATTTTCTTAGGTTGTTGGAGGTTGAAATTGAGAAATTTAATGGTTTTTTTGTTGAGAAAGAAGAAGAATATGTTATCAAATGGAAGGAATTGCAAGACAAAGTTGCCTGGGCCAAGAGTTCTGATATGGAGTTGATGACAGTAGGGAGGGAAATAGTGGATTTTCATGGAGAGATGGTTTTGTTAGAGAACTATAGTGCACTTAACTACACAGGTTTGGTTAAGATAATAAAGAAATATGATAAGCGAACCGGTGCACTACTTCGGTTACCTTTTATCCAAGATGTATTGAACCAGCCATTCTTCAAAATCGATGTGCTTAACAAGCTTGTGAAGGAGTGTGAGGTGATGCTAAGCATTATTTTCCCCAAAAGTGGGTCTCTAGGGCAATCCTTGTCAACTAGTGAGGTTTTTGAGGAAGTTGCGCGTGAATCCACAACTGCAAATGAAACTAAGGAGACACTAGACCATGTCCCAAAAGAACTTTCTGAGATCCAAAATATGGAGAACATTTTCATCAAACTAACTACATCAGCACTGGATACTCTGAAAGAGATCAGGGGTGGAAGCTCAACTGTAAGCATATACTCATTGCCTCCTCTGCACAGTGAGACTTTGGTAGAGGATTGA
Protein sequence

>Msa0055340

MLPLTTTEHRNFKNMRITGDDDDFAEVRMEKVLAGRRRVKEATMKFWKILNNQIEQTLPDWRDKFLSYKDLKKQLKLIVPKEIDSSSSSSKRRRLDEDGGAEGEVTKEVNDFLRLLEVEIEKFNGFFVEKEEEYVIKWKELQDKVAWAKSSDMELMTVGREIVDFHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKECEVMLSIIFPKSGSLGQSLSTSEVFEEVARESTTANETKETLDHVPKELSEIQNMENIFIKLTTSALDTLKEIRGGSSTVSIYSLPPLHSETLVED*