Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056770 | XP_003588615.1 | 99.395 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2047 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056770 | sp|O23461|ARAK_ARATH | 77.778 | 990 | 201 | 5 | 1 | 973 | 51 | 1038 | 0.0 | 1589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056770 | G7I565 | 99.395 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2047 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008590 | Msa0056770 | 0.827299 | 1.688746e-54 | -8.615850e-47 |
| Msa0056600 | Msa0056770 | 0.982335 | 7.922610e-155 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056770 | MtrunA17_Chr1g0147611 | 99.395 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2047 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0056770 | AT4G16130.1 | 77.778 | 990 | 201 | 5 | 1 | 973 | 51 | 1038 | 0.0 | 1589 |
| Msa0056770 | AT3G42850.1 | 71.562 | 960 | 258 | 5 | 17 | 972 | 14 | 962 | 0.0 | 1423 |
| Msa0056770 | AT3G42850.2 | 71.562 | 960 | 258 | 5 | 17 | 972 | 23 | 971 | 0.0 | 1422 |
Find 271 sgRNAs with CRISPR-Local
Find 625 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGACTTGTTCCAAAAT+TGG | 0.154324 | 1_2:+12417216 | None:intergenic |
| TGTCCGAATTGGAACCTTTA+TGG | 0.160675 | 1_2:-12409499 | Msa0056770:CDS |
| CGTCGATCGCCTTGCTTCTT+TGG | 0.172059 | 1_2:-12415620 | Msa0056770:CDS |
| ATGCAAGTGAAATCCAATTT+TGG | 0.225607 | 1_2:-12417229 | Msa0056770:five_prime_UTR |
| TACATTACTGGTCATGGTTT+TGG | 0.226863 | 1_2:-12416828 | Msa0056770:CDS |
| ATATGTTGCTGGAGCAATTT+TGG | 0.242801 | 1_2:-12410633 | Msa0056770:CDS |
| ACTGATCAACTTAACTCTTT+AGG | 0.252205 | 1_2:-12408864 | Msa0056770:CDS |
| ATCCTTCAGGAGACAGCTTT+TGG | 0.254406 | 1_2:-12412226 | Msa0056770:CDS |
| CTGTCTGTGTGACAAATTTC+AGG | 0.261238 | 1_2:-12415147 | Msa0056770:intron |
| CCTGGTTCGCCTGTGAATTC+TGG | 0.266254 | 1_2:-12411933 | Msa0056770:CDS |
| TGTAAGAATGCCACAGTATC+TGG | 0.279595 | 1_2:+12411744 | None:intergenic |
| TCAGCGGAAGCGTACCATTC+TGG | 0.280452 | 1_2:+12411966 | None:intergenic |
| TTCATCATCGTTCAATAGTT+TGG | 0.280611 | 1_2:-12414852 | Msa0056770:CDS |
| TCCCAACCATATCCGGGTTT+GGG | 0.283374 | 1_2:-12409862 | Msa0056770:CDS |
| TGACCACCATCAATGGTTTC+AGG | 0.291179 | 1_2:+12409140 | None:intergenic |
| TTGTACAAAATAGGTGCTTT+TGG | 0.292687 | 1_2:-12415674 | Msa0056770:intron |
| TTGCGTGATGCAATAGTTCT+TGG | 0.294914 | 1_2:-12412029 | Msa0056770:CDS |
| TCGAAATTCCCAACCATATC+CGG | 0.296624 | 1_2:-12409869 | Msa0056770:CDS |
| ACATGACAAGCTTCTCTAAT+TGG | 0.297323 | 1_2:+12411200 | None:intergenic |
| GTATCATACGGCTCGGAATT+AGG | 0.308893 | 1_2:-12410863 | Msa0056770:CDS |
| GATGATACACCTTTCCCTTC+TGG | 0.310825 | 1_2:+12410545 | None:intergenic |
| GGCGGTATTGCTGATTATTC+TGG | 0.312100 | 1_2:-12411404 | Msa0056770:CDS |
| TATCATCTTCATACCCATAA+AGG | 0.318436 | 1_2:+12409485 | None:intergenic |
| CGGGTTTGGGGAATTGATTC+CGG | 0.323164 | 1_2:-12409849 | Msa0056770:CDS |
| TTTGGACTGTGGAGCTGTTC+AGG | 0.325121 | 1_2:-12415656 | Msa0056770:CDS |
| ATATTTATAGTTATAATTGA+TGG | 0.329133 | 1_2:+12417025 | None:intergenic |
| AGGAGGAGAGTGTTTCAAAT+TGG | 0.331853 | 1_2:+12417258 | None:intergenic |
| TTCCCAACCATATCCGGGTT+TGG | 0.337890 | 1_2:-12409863 | Msa0056770:CDS |
| GTCCGAATTGGAACCTTTAT+GGG | 0.338032 | 1_2:-12409498 | Msa0056770:CDS |
| TTTAGGAGAATTGCTATATC+AGG | 0.338150 | 1_2:-12408847 | Msa0056770:intron |
| AGGAGCTCCTTGTGGTGTTA+TGG | 0.339155 | 1_2:-12410058 | Msa0056770:CDS |
| TCACCCGGTGCAGGGAAGTT+TGG | 0.342778 | 1_2:-12407684 | Msa0056770:CDS |
| AAGCCAGCTAATTTCTATTC+TGG | 0.344082 | 1_2:+12407485 | None:intergenic |
| TGCCTCTGAGGCACTGGTTA+AGG | 0.345931 | 1_2:+12407152 | None:intergenic |
| CTTAACGGCGTTTAGCTTAG+TGG | 0.349559 | 1_2:-12412062 | Msa0056770:intron |
| CTTGCTTTCTCATACGAGAT+TGG | 0.350361 | 1_2:+12410785 | None:intergenic |
| CTAGGTTGTTACATAGGATA+TGG | 0.355190 | 1_2:+12417164 | None:intergenic |
| AATATCCCGGGAGACGAATA+AGG | 0.356892 | 1_2:+12414448 | None:intergenic |
| TTCTGGTAGTCTTGTCCTGC+AGG | 0.359445 | 1_2:-12411387 | Msa0056770:intron |
| AATTGTTGATGAATCAAATA+TGG | 0.363154 | 1_2:-12407257 | Msa0056770:three_prime_UTR |
| CAATTCCCCAAACCCGGATA+TGG | 0.364179 | 1_2:+12409856 | None:intergenic |
| AGCTACAGTGCTTGTGGACT+TGG | 0.365675 | 1_2:-12408670 | Msa0056770:CDS |
| TTTGGTCTTAATGACTGAAT+TGG | 0.366313 | 1_2:-12410615 | Msa0056770:CDS |
| ACCTCCTGGTTGGTTGTGCC+TGG | 0.367039 | 1_2:-12413150 | Msa0056770:intron |
| CTGCAGCTAATCTCTTCAAT+TGG | 0.368123 | 1_2:-12411674 | Msa0056770:CDS |
| ATGATACACCTTTCCCTTCT+GGG | 0.369734 | 1_2:+12410546 | None:intergenic |
| CCCTCCTTTGTCATTCTGTC+TGG | 0.373545 | 1_2:+12411124 | None:intergenic |
| ATAGAAATTAGCTGGCTTGA+TGG | 0.373779 | 1_2:-12407480 | Msa0056770:three_prime_UTR |
| AGTGTTGGAGGTGCAGATTA+TGG | 0.374226 | 1_2:-12409525 | Msa0056770:CDS |
| AAGATCACTGGTGGCGGTTC+AGG | 0.375207 | 1_2:-12408556 | Msa0056770:CDS |
| GGTGGAACGGTTTGTGTAAT+CGG | 0.375592 | 1_2:-12408535 | Msa0056770:CDS |
| ACAGGTCTCCGATGTTGTTC+CGG | 0.376591 | 1_2:-12415206 | Msa0056770:intron |
| GTCGGGCGTATATGCGTCTT+TGG | 0.376853 | 1_2:+12412982 | None:intergenic |
| CCCATTACATCTAACCTTCC+AGG | 0.376953 | 1_2:+12411425 | None:intergenic |
| TGTAACTCAGGATTGAATAT+CGG | 0.380947 | 1_2:-12410234 | Msa0056770:intron |
| TCCTGGAAGGTTAGATGTAA+TGG | 0.380956 | 1_2:-12411426 | Msa0056770:CDS |
| GCCGAAGGCGGTACATTATT+CGG | 0.383376 | 1_2:-12408583 | Msa0056770:CDS |
| GAAGCAAGGAACAAAGATTA+TGG | 0.384975 | 1_2:-12407441 | Msa0056770:three_prime_UTR |
| AACCAACCTGTGTCTTATTC+CGG | 0.389685 | 1_2:+12409830 | None:intergenic |
| GCTGTTCATGGAAATAATAT+TGG | 0.391884 | 1_2:-12407410 | Msa0056770:three_prime_UTR |
| ACAAATCCATGTCAAAAGTT+GGG | 0.395705 | 1_2:+12410831 | None:intergenic |
| GAAAAGAAACGGCAAGTAAC+CGG | 0.397740 | 1_2:+12407716 | None:intergenic |
| GCTTGTGGACTTGGCTCTGA+TGG | 0.405235 | 1_2:-12408661 | Msa0056770:CDS |
| TCAGATGTGAAAACAAAATC+AGG | 0.407657 | 1_2:+12416532 | None:intergenic |
| AATCATAGCAAGAAGTTTGT+TGG | 0.408677 | 1_2:+12410008 | None:intergenic |
| CAGCGGAAGCGTACCATTCT+GGG | 0.411575 | 1_2:+12411967 | None:intergenic |
| CATGATGTGCATTTGGTAAC+TGG | 0.413126 | 1_2:-12416559 | Msa0056770:CDS |
| TTTGTCATTCTGTCTGGCCT+CGG | 0.414613 | 1_2:+12411130 | None:intergenic |
| GACAAATCCATGTCAAAAGT+TGG | 0.414922 | 1_2:+12410830 | None:intergenic |
| TGTCGTGCGGCAGCAGATGC+TGG | 0.417934 | 1_2:-12415178 | Msa0056770:CDS |
| GATTATGGATCTGTCCGAAT+TGG | 0.419832 | 1_2:-12409510 | Msa0056770:CDS |
| GCTTATTACATTACTGGTCA+TGG | 0.422585 | 1_2:-12416834 | Msa0056770:CDS |
| CACCGCATGCTGAAGCCATC+TGG | 0.422875 | 1_2:+12410034 | None:intergenic |
| TGATGTCAAGATTTGAGCTC+GGG | 0.424573 | 1_2:+12415454 | None:intergenic |
| CTAGTTTGCCTCTGAGGCAC+TGG | 0.425862 | 1_2:+12407146 | None:intergenic |
| TAAATTACATAAGTAATCTA+AGG | 0.426868 | 1_2:+12409359 | None:intergenic |
| TACATACTTGGGCAATATCC+CGG | 0.427188 | 1_2:+12414435 | None:intergenic |
| TGAGTTCCTTATTCGTCTCC+CGG | 0.430045 | 1_2:-12414454 | Msa0056770:CDS |
| CGATGTTATTGATGTCCCTT+TGG | 0.431674 | 1_2:-12414299 | Msa0056770:CDS |
| TGAACCGCCACCAGTGATCT+TGG | 0.432891 | 1_2:+12408558 | None:intergenic |
| GGTGGCAGCTCACATCCTTC+AGG | 0.433019 | 1_2:-12412239 | Msa0056770:CDS |
| CTCAATCAAAGCCGACTTAG+TGG | 0.438090 | 1_2:-12415414 | Msa0056770:intron |
| GAATATCGGCTCAAGGGATC+TGG | 0.441725 | 1_2:-12410220 | Msa0056770:CDS |
| GCAGAGTACGTCATGGCTGC+TGG | 0.441895 | 1_2:-12414877 | Msa0056770:CDS |
| TGGCGGAAGGTCCGCGTTGT+CGG | 0.445039 | 1_2:+12413021 | None:intergenic |
| AGGTGGGCAGCATATGTTGC+TGG | 0.446357 | 1_2:-12410644 | Msa0056770:CDS |
| CCTGGAAGGTTAGATGTAAT+GGG | 0.451747 | 1_2:-12411425 | Msa0056770:CDS |
| TATCTCGGCCAGGAGCCCTT+TGG | 0.452807 | 1_2:+12411997 | None:intergenic |
| CGATGTCAGAAGTGATTTGA+AGG | 0.453781 | 1_2:+12408896 | None:intergenic |
| ATAACGAGCTTCACACCATC+TGG | 0.455690 | 1_2:+12414139 | None:intergenic |
| GAGGGCTCATCACCCGGTGC+AGG | 0.458092 | 1_2:-12407693 | Msa0056770:CDS |
| CTCGTTATTCTCAACTTTGG+TGG | 0.459493 | 1_2:-12414124 | Msa0056770:CDS |
| GTGGCCAAACTTCCCTGCAC+CGG | 0.460213 | 1_2:+12407680 | None:intergenic |
| TCCGAATAATGTACCGCCTT+CGG | 0.463006 | 1_2:+12408582 | None:intergenic |
| TGCTATGATACAGGCATCAA+TGG | 0.463062 | 1_2:-12412547 | Msa0056770:CDS |
| TCATCGTTCAATAGTTTGGC+AGG | 0.463346 | 1_2:-12414848 | Msa0056770:intron |
| CCCCAAACCCGGATATGGTT+GGG | 0.463554 | 1_2:+12409861 | None:intergenic |
| GCTGCCGCACGACATGCAAC+CGG | 0.464710 | 1_2:+12415187 | None:intergenic |
| GATTTCACTTGCATACTACT+AGG | 0.464907 | 1_2:+12417238 | None:intergenic |
| TTGGCTCTGATGGGACAGAT+AGG | 0.465296 | 1_2:-12408651 | Msa0056770:CDS |
| CTTACAATAATTTGTACAGC+AGG | 0.465467 | 1_2:-12407552 | Msa0056770:three_prime_UTR |
| TTGGTCTTAATGACTGAATT+GGG | 0.466089 | 1_2:-12410614 | Msa0056770:CDS |
| GCTTTCATGATCAAGGTTTG+TGG | 0.468615 | 1_2:-12413049 | Msa0056770:intron |
| TACCCATAAAGGTTCCAATT+CGG | 0.470768 | 1_2:+12409496 | None:intergenic |
| CTTATCGCACGTTCAAGATA+AGG | 0.471646 | 1_2:+12412580 | None:intergenic |
| CTGATGTCAAGATTTGAGCT+CGG | 0.472473 | 1_2:+12415453 | None:intergenic |
| ATGCAGCCTGCAGAGATTGT+TGG | 0.472922 | 1_2:-12409897 | Msa0056770:intron |
| AAAGAAGATTTCTTACCTCC+TGG | 0.473621 | 1_2:-12413164 | Msa0056770:CDS |
| TTGAAACCCTGCTATGATAC+AGG | 0.475607 | 1_2:-12412556 | Msa0056770:CDS |
| TTTGATTGAGTTCAGCCATT+CGG | 0.476654 | 1_2:+12415427 | None:intergenic |
| GAGATTTAATCACCGGTCAC+TGG | 0.477186 | 1_2:-12412606 | Msa0056770:CDS |
| TATCAACTCCAAAGGGCTCC+TGG | 0.478039 | 1_2:-12412005 | Msa0056770:CDS |
| CCAGAATTCACAGGCGAACC+AGG | 0.478176 | 1_2:+12411933 | None:intergenic |
| TGCAGGACATGATGTGCATT+TGG | 0.479260 | 1_2:-12416566 | Msa0056770:CDS |
| TCGTCTTATCTCCAGCCATC+AGG | 0.481796 | 1_2:-12413197 | Msa0056770:intron |
| ACCTTGCGAATGAATAATCT+AGG | 0.485238 | 1_2:+12416499 | None:intergenic |
| ACATACTTGGGCAATATCCC+GGG | 0.485503 | 1_2:+12414436 | None:intergenic |
| ATGGTGAAAGAAGCTGTTCA+TGG | 0.486940 | 1_2:-12407422 | Msa0056770:three_prime_UTR |
| ATTCTTCATGGAGATGTTCA+AGG | 0.487591 | 1_2:-12411771 | Msa0056770:CDS |
| ATCATCTTGTTCTACTTCAT+CGG | 0.490279 | 1_2:+12409407 | None:intergenic |
| AGTATGACTTTGTATGACTT+TGG | 0.491448 | 1_2:-12407362 | Msa0056770:three_prime_UTR |
| ATTGATGCCTGTATCATAGC+AGG | 0.491834 | 1_2:+12412549 | None:intergenic |
| TATTCTCAACTTTGGTGGCC+AGG | 0.495475 | 1_2:-12414119 | Msa0056770:intron |
| ACTTCTTGCTATGATTTGCC+AGG | 0.497039 | 1_2:-12410001 | Msa0056770:intron |
| TGCAGCTAATCTCTTCAATT+GGG | 0.497563 | 1_2:-12411673 | Msa0056770:CDS |
| CAGGTGGAGAATCACATTGT+AGG | 0.499581 | 1_2:-12410078 | Msa0056770:CDS |
| AATGTGGTGTCGAAATGATC+AGG | 0.500383 | 1_2:-12412630 | Msa0056770:CDS |
| CTTACAGAGCTTATCCGAGT+TGG | 0.503458 | 1_2:-12411727 | Msa0056770:CDS |
| TTCATTGATAGGATGTAATG+TGG | 0.504881 | 1_2:+12409040 | None:intergenic |
| TCACAGGCGAACCAGGTTGT+TGG | 0.505403 | 1_2:+12411940 | None:intergenic |
| ACGAATAAGGAACTCACAAT+GGG | 0.507422 | 1_2:+12414461 | None:intergenic |
| TGGGGATGTTAATGCAGTCT+TGG | 0.507520 | 1_2:-12407613 | Msa0056770:CDS |
| TCTTGGTTATCAACTCCAAA+GGG | 0.507815 | 1_2:-12412012 | Msa0056770:CDS |
| ACACTTCCTGAAACCATTGA+TGG | 0.508774 | 1_2:-12409146 | Msa0056770:CDS |
| TCGCCTTGCTTCTTTGGAGA+AGG | 0.509539 | 1_2:-12415614 | Msa0056770:intron |
| TGGCCAAACTTCCCTGCACC+GGG | 0.510897 | 1_2:+12407681 | None:intergenic |
| GCAAGGCATTTGATCGATGC+AGG | 0.511672 | 1_2:-12416583 | Msa0056770:CDS |
| AAGCTCGTTATTCTCAACTT+TGG | 0.513454 | 1_2:-12414127 | Msa0056770:CDS |
| TATGGATAAAGTTAGAGAAG+AGG | 0.514579 | 1_2:+12417182 | None:intergenic |
| ATGAGAATTGATCAAGAAAG+TGG | 0.518113 | 1_2:-12416891 | Msa0056770:CDS |
| ACGAGGCCAACAATCTCTGC+AGG | 0.520181 | 1_2:+12409891 | None:intergenic |
| CGAAATTCCCAACCATATCC+GGG | 0.522174 | 1_2:-12409868 | Msa0056770:CDS |
| CTTGTGGACTTGGCTCTGAT+GGG | 0.523785 | 1_2:-12408660 | Msa0056770:CDS |
| GATAAAGTCAAAGGCTTCCA+CGG | 0.525915 | 1_2:-12409466 | Msa0056770:CDS |
| TCCTAGATTATTCATTCGCA+AGG | 0.525948 | 1_2:-12416500 | Msa0056770:intron |
| GTTGTATATTTCAGTGTTGG+AGG | 0.527042 | 1_2:-12409537 | Msa0056770:intron |
| ATCATGCTAGTTTGCCTCTG+AGG | 0.528683 | 1_2:+12407140 | None:intergenic |
| TTCTCATCAATAATAGTGAC+AGG | 0.529039 | 1_2:+12409086 | None:intergenic |
| TGGCCAGAATAGAAATTAGC+TGG | 0.532421 | 1_2:-12407488 | Msa0056770:three_prime_UTR |
| TTGATGTCCCTTTGGTGGTG+AGG | 0.535182 | 1_2:-12414291 | Msa0056770:CDS |
| TCCCCAAACCCGGATATGGT+TGG | 0.536127 | 1_2:+12409860 | None:intergenic |
| TCAATAACATCGCGAAAAGC+AGG | 0.536223 | 1_2:+12414310 | None:intergenic |
| ACTGAGATGAGTGCTGCAAA+TGG | 0.536696 | 1_2:-12409438 | Msa0056770:CDS |
| AAGATTTCTTACCTCCTGGT+TGG | 0.538032 | 1_2:-12413160 | Msa0056770:CDS |
| TCGCTTGTTGAAGGTAAGGA+AGG | 0.538331 | 1_2:-12414173 | Msa0056770:intron |
| ATCAGGAGAGATTTAATCAC+CGG | 0.538975 | 1_2:-12412613 | Msa0056770:CDS |
| GTCACATGCTGCAATAATGT+CGG | 0.539434 | 1_2:+12412964 | None:intergenic |
| TTCCAAAAGCTGTCTCCTGA+AGG | 0.541388 | 1_2:+12412224 | None:intergenic |
| TTGTGGTGTTATGGACCAGA+TGG | 0.542070 | 1_2:-12410049 | Msa0056770:CDS |
| TGTTATTGATGTCCCTTTGG+TGG | 0.542724 | 1_2:-12414296 | Msa0056770:CDS |
| CAATGAAAATTTCCGAGTCA+AGG | 0.543336 | 1_2:-12409024 | Msa0056770:intron |
| ATCACTGGTGGCGGTTCAGG+TGG | 0.543843 | 1_2:-12408553 | Msa0056770:CDS |
| GCTACACAAATCTGCAAAAG+AGG | 0.543908 | 1_2:-12414266 | Msa0056770:intron |
| CGGAATCAATTCCCCAAACC+CGG | 0.547902 | 1_2:+12409850 | None:intergenic |
| GTATCATCTGCGGTCCCAGA+AGG | 0.548671 | 1_2:-12410560 | Msa0056770:CDS |
| TCTCTACGTACAAAGACAAA+GGG | 0.549410 | 1_2:+12412806 | None:intergenic |
| TGTAGCCTCCTCACCACCAA+AGG | 0.549575 | 1_2:+12414283 | None:intergenic |
| TGGTGGCGGTTCAGGTGGAA+CGG | 0.549809 | 1_2:-12408548 | Msa0056770:CDS |
| GATGAGCCCTCGAAAAGAAA+CGG | 0.549907 | 1_2:+12407705 | None:intergenic |
| CGATGACTAGGTTGTTACAT+AGG | 0.552736 | 1_2:+12417158 | None:intergenic |
| AAGATAAGGTCTCCAGTGAC+CGG | 0.555196 | 1_2:+12412594 | None:intergenic |
| CCCAACCATATCCGGGTTTG+GGG | 0.556996 | 1_2:-12409861 | Msa0056770:CDS |
| AGGGCTCATCACCCGGTGCA+GGG | 0.557651 | 1_2:-12407692 | Msa0056770:CDS |
| TATGAAGATGATAAAGTCAA+AGG | 0.558607 | 1_2:-12409475 | Msa0056770:CDS |
| TTCTTGGTTATCAACTCCAA+AGG | 0.559012 | 1_2:-12412013 | Msa0056770:CDS |
| TTCCACAGTCTATGCTTACT+CGG | 0.560903 | 1_2:+12411158 | None:intergenic |
| CAGAGAAGAAAAGCTGATCA+TGG | 0.561205 | 1_2:-12407590 | Msa0056770:exon |
| TGAATTGGGTGTGAAATTTG+AGG | 0.563347 | 1_2:-12410600 | Msa0056770:CDS |
| CAGGATTGAATATCGGCTCA+AGG | 0.564322 | 1_2:-12410227 | Msa0056770:CDS |
| CACAAGCACTGTAGCTGTAG+TGG | 0.566263 | 1_2:+12408677 | None:intergenic |
| TCACATGCTGCAATAATGTC+GGG | 0.566681 | 1_2:+12412965 | None:intergenic |
| TCTGGCTTTGCTATGCCAGA+AGG | 0.567932 | 1_2:-12410202 | Msa0056770:intron |
| GGGATAGCAATATCTCGGCC+AGG | 0.568783 | 1_2:+12411987 | None:intergenic |
| GCAGCATGTGACTGTATGCT+TGG | 0.569733 | 1_2:-12412953 | Msa0056770:intron |
| TGGTACCGTTAGTGAAGCCT+TGG | 0.570053 | 1_2:-12412840 | Msa0056770:CDS |
| ACCAGGTTGTTGGTCTTCAG+CGG | 0.570513 | 1_2:+12411950 | None:intergenic |
| TTATTCGGAGCCAAGATCAC+TGG | 0.570848 | 1_2:-12408568 | Msa0056770:CDS |
| GACGAATAAGGAACTCACAA+TGG | 0.573809 | 1_2:+12414460 | None:intergenic |
| ACAGTCTATGCTTACTCGGA+TGG | 0.573984 | 1_2:+12411162 | None:intergenic |
| ATCTCTACGTACAAAGACAA+AGG | 0.576297 | 1_2:+12412805 | None:intergenic |
| CACTACAGCTACAGTGCTTG+TGG | 0.578889 | 1_2:-12408676 | Msa0056770:CDS |
| TATGTAATTTAACACCTCAC+AGG | 0.579853 | 1_2:-12409347 | Msa0056770:intron |
| GAGTTCCTTATTCGTCTCCC+GGG | 0.581970 | 1_2:-12414453 | Msa0056770:CDS |
| AATTTCATATACCACTAAGT+CGG | 0.583260 | 1_2:+12415403 | None:intergenic |
| AGTACCAGGCACAACCAACC+AGG | 0.583284 | 1_2:+12413146 | None:intergenic |
| GAGATATTGCTATCCCAGAA+TGG | 0.583843 | 1_2:-12411980 | Msa0056770:CDS |
| TCCGCTGAAGACCAACAACC+TGG | 0.585881 | 1_2:-12411951 | Msa0056770:CDS |
| CAAATCCATGTCAAAAGTTG+GGG | 0.588549 | 1_2:+12410832 | None:intergenic |
| GACCAGATGGCTTCAGCATG+CGG | 0.589220 | 1_2:-12410036 | Msa0056770:CDS |
| TGAGGATAGTATCAGCATGC+TGG | 0.590558 | 1_2:-12410582 | Msa0056770:CDS |
| TTGGCCACCTGAAAATTCGC+CGG | 0.591541 | 1_2:-12407665 | Msa0056770:CDS |
| ATGTCCCTTTGGTGGTGAGG+AGG | 0.592407 | 1_2:-12414288 | Msa0056770:CDS |
| CAAAGAAGCAAGGCGATCGA+CGG | 0.593205 | 1_2:+12415621 | None:intergenic |
| GCATACAAAGAGAGAGCGCA+AGG | 0.594484 | 1_2:-12411697 | Msa0056770:CDS |
| ATTATCTCTAAAAGATGAGA+GGG | 0.594808 | 1_2:-12407298 | Msa0056770:three_prime_UTR |
| TAAATGTAAACTGTGAAGCA+AGG | 0.595875 | 1_2:-12407455 | Msa0056770:three_prime_UTR |
| TTACAATAATTTGTACAGCA+GGG | 0.596071 | 1_2:-12407551 | Msa0056770:three_prime_UTR |
| GAGATAATATGAATGGTCAA+AGG | 0.597732 | 1_2:+12407313 | None:intergenic |
| ATTCTGGGATAGCAATATCT+CGG | 0.598365 | 1_2:+12411982 | None:intergenic |
| GCATAGCCTCCAGAATTCAC+AGG | 0.599476 | 1_2:+12411924 | None:intergenic |
| CGATCACGTCAGGTATCATA+CGG | 0.599607 | 1_2:-12410875 | Msa0056770:intron |
| TTGTTACGAGAGCTCCTGGA+AGG | 0.602139 | 1_2:-12411439 | Msa0056770:CDS |
| GTAGCCTCCTCACCACCAAA+GGG | 0.602602 | 1_2:+12414284 | None:intergenic |
| TTCCTTAACCAGTGCCTCAG+AGG | 0.602698 | 1_2:-12407154 | Msa0056770:three_prime_UTR |
| AGGATTGAATATCGGCTCAA+GGG | 0.603039 | 1_2:-12410226 | Msa0056770:CDS |
| TCATTGATAGGATGTAATGT+GGG | 0.603772 | 1_2:+12409041 | None:intergenic |
| TCTGCTATTGCAGCTTCTCA+CGG | 0.605052 | 1_2:-12410494 | Msa0056770:intron |
| TCTGCGGTCCCAGAAGGGAA+AGG | 0.607354 | 1_2:-12410554 | Msa0056770:CDS |
| GTATGCCAAGGCTTCACTAA+CGG | 0.609651 | 1_2:+12412835 | None:intergenic |
| TGTATGCTTCACAACCAACT+CGG | 0.609935 | 1_2:+12411713 | None:intergenic |
| CTTCAAATCACTTCTGACAT+CGG | 0.610764 | 1_2:-12408895 | Msa0056770:CDS |
| TTGATTCCGGAATAAGACAC+AGG | 0.613311 | 1_2:-12409836 | Msa0056770:intron |
| TTGATGCCTGTATCATAGCA+GGG | 0.614362 | 1_2:+12412550 | None:intergenic |
| ATCATCTTCTGCATCTGTCG+AGG | 0.615270 | 1_2:-12410528 | Msa0056770:CDS |
| CTTATCTCCAGCCATCAGGA+TGG | 0.615466 | 1_2:-12413193 | Msa0056770:intron |
| TATCATCTGCGGTCCCAGAA+GGG | 0.615484 | 1_2:-12410559 | Msa0056770:CDS |
| GGAGCCAAGATCACTGGTGG+CGG | 0.616107 | 1_2:-12408562 | Msa0056770:CDS |
| TACACTGATGCAGATAGCTG+AGG | 0.616354 | 1_2:-12414490 | Msa0056770:intron |
| ATAAAGTCCTAACCTTGACT+CGG | 0.617132 | 1_2:+12409012 | None:intergenic |
| GCCAGACAGAATGACAAAGG+AGG | 0.617613 | 1_2:-12411125 | Msa0056770:CDS |
| CCAGACAGAATGACAAAGGA+GGG | 0.619619 | 1_2:-12411124 | Msa0056770:CDS |
| AGCTAATCTCTTCAATTGGG+AGG | 0.620507 | 1_2:-12411670 | Msa0056770:intron |
| TCTGAGGCACTGGTTAAGGA+AGG | 0.621809 | 1_2:+12407156 | None:intergenic |
| GGTTCGCCTGTGAATTCTGG+AGG | 0.623757 | 1_2:-12411930 | Msa0056770:CDS |
| ACGTCAGGTATCATACGGCT+CGG | 0.626612 | 1_2:-12410870 | Msa0056770:intron |
| TATTATCTCTAAAAGATGAG+AGG | 0.628297 | 1_2:-12407299 | Msa0056770:three_prime_UTR |
| ACATGCAACCGGAACAACAT+CGG | 0.629353 | 1_2:+12415198 | None:intergenic |
| TTCACTTGCATACTACTAGG+AGG | 0.634487 | 1_2:+12417241 | None:intergenic |
| TTGTATTTCAGGTTCAGCAG+AGG | 0.634669 | 1_2:-12407752 | Msa0056770:intron |
| CATCTATGCAGAGTACGTCA+TGG | 0.635078 | 1_2:-12414884 | Msa0056770:CDS |
| TGATGATGAAAACGATGACT+AGG | 0.639633 | 1_2:+12417146 | None:intergenic |
| TTACCTTCTCCAAAGAAGCA+AGG | 0.639639 | 1_2:+12415611 | None:intergenic |
| AGTGCAGCATCTAAAGCCGA+AGG | 0.640589 | 1_2:-12408598 | Msa0056770:CDS |
| TACAGGCATCAATGGTGGTG+AGG | 0.641005 | 1_2:-12412539 | Msa0056770:intron |
| AAAGGGACACTTGTATGCCA+AGG | 0.643810 | 1_2:+12412823 | None:intergenic |
| AAGGAACTCAACGTACCAGA+TGG | 0.644036 | 1_2:-12414154 | Msa0056770:CDS |
| TCTTGACATCAGAAACCGAA+TGG | 0.644725 | 1_2:-12415442 | Msa0056770:CDS |
| TTCGGAGCCAAGATCACTGG+TGG | 0.644935 | 1_2:-12408565 | Msa0056770:CDS |
| GAATGAATGTGTAGGTGGCA+AGG | 0.645934 | 1_2:-12416600 | Msa0056770:intron |
| TTTGGTGCGTATTTGCAAAG+TGG | 0.656505 | 1_2:-12407344 | Msa0056770:three_prime_UTR |
| ATCTGGTCCATAACACCACA+AGG | 0.656906 | 1_2:+12410051 | None:intergenic |
| GAGGCCAGACAGAATGACAA+AGG | 0.665956 | 1_2:-12411128 | Msa0056770:CDS |
| CAGCATGCTGGTATCATCTG+CGG | 0.671935 | 1_2:-12410570 | Msa0056770:CDS |
| CACATTGTAGGAGCTCCTTG+TGG | 0.673792 | 1_2:-12410066 | Msa0056770:CDS |
| TATGAATGGTCAAAGGACGA+AGG | 0.676333 | 1_2:+12407320 | None:intergenic |
| GATGTCAAGATTTGAGCTCG+GGG | 0.677985 | 1_2:+12415455 | None:intergenic |
| TCAAGGTCTTCCAGATACTG+TGG | 0.680866 | 1_2:-12411754 | Msa0056770:CDS |
| ATTTGCAAGACAGCAGTGTG+AGG | 0.680926 | 1_2:+12411101 | None:intergenic |
| CATGACTGAAAATATCACAA+AGG | 0.681632 | 1_2:+12407509 | None:intergenic |
| CTTCCTGAAACCATTGATGG+TGG | 0.682660 | 1_2:-12409143 | Msa0056770:CDS |
| ACTCATCTCAGTCAATTCCG+TGG | 0.692755 | 1_2:+12409449 | None:intergenic |
| TTGTGGTGCTTCCGACAACG+CGG | 0.696936 | 1_2:-12413032 | Msa0056770:CDS |
| ATCCGAGTAAGCATAGACTG+TGG | 0.710942 | 1_2:-12411160 | Msa0056770:CDS |
| TAGACTGTGGAAACATGCCG+AGG | 0.715833 | 1_2:-12411147 | Msa0056770:CDS |
| ACCAGGCACAACCAACCAGG+AGG | 0.716179 | 1_2:+12413149 | None:intergenic |
| TATGATACAGGCATCAATGG+TGG | 0.722369 | 1_2:-12412544 | Msa0056770:CDS |
| TGTTCCGGTTGCATGTCGTG+CGG | 0.723282 | 1_2:-12415191 | Msa0056770:CDS |
| GCAGCATCTAAAGCCGAAGG+CGG | 0.726164 | 1_2:-12408595 | Msa0056770:CDS |
| GGAAGGTTAGATGTAATGGG+CGG | 0.744345 | 1_2:-12411422 | Msa0056770:CDS |
| ACATGCCACTCGTGTCACAG+AGG | 0.747036 | 1_2:-12416805 | Msa0056770:intron |
| TATGGTTGGGAATTTCGACG+AGG | 0.773857 | 1_2:+12409874 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATAGTTATAATTGA+TGG | + | chr1_2:12407377-12407396 | None:intergenic | 10.0% |
| !!! | AAATAATTCAATTTTGATTT+TGG | - | chr1_2:12407698-12407717 | Msa0056770:CDS | 10.0% |
| !!! | AATAATTCAATTTTGATTTT+GGG | - | chr1_2:12407699-12407718 | Msa0056770:CDS | 10.0% |
| !!! | TTTGTATTTTTCAATTTTAA+AGG | - | chr1_2:12407950-12407969 | Msa0056770:intron | 10.0% |
| !! | TAAAAACTATTATAAAATTC+CGG | + | chr1_2:12410333-12410352 | None:intergenic | 10.0% |
| !!! | TATTTTGATCATAATATATT+TGG | - | chr1_2:12411312-12411331 | Msa0056770:intron | 10.0% |
| !!! | TTTGCAATTTTTATTATTTT+AGG | - | chr1_2:12411524-12411543 | Msa0056770:intron | 10.0% |
| !!! | TTTATTATTTTAGGAAAAAT+CGG | - | chr1_2:12411533-12411552 | Msa0056770:intron | 10.0% |
| !! | ATTATCTTATAAAAAATTGT+TGG | + | chr1_2:12415126-12415145 | None:intergenic | 10.0% |
| !! | TTGAAAACTATAAAAATAAT+TGG | + | chr1_2:12415998-12416017 | None:intergenic | 10.0% |
| !!! | TATACTAATGTTTTGTTTTT+TGG | + | chr1_2:12407436-12407455 | None:intergenic | 15.0% |
| !!! | TATTGAATATGTTTTTGATA+AGG | - | chr1_2:12408199-12408218 | Msa0056770:intron | 15.0% |
| !! | TTTCTATTTCAAATTAACAA+GGG | + | chr1_2:12409023-12409042 | None:intergenic | 15.0% |
| !!! | TTCAAGTTAATCATTAATTA+AGG | + | chr1_2:12410043-12410062 | None:intergenic | 15.0% |
| !!! | TATAATAGTTTTTACATTCA+TGG | - | chr1_2:12410339-12410358 | Msa0056770:intron | 15.0% |
| !!! | TTTTGAACTAAATAATATAG+CGG | - | chr1_2:12410533-12410552 | Msa0056770:CDS | 15.0% |
| !! | CTAAAATAAAAAACAAATGA+TGG | + | chr1_2:12411742-12411761 | None:intergenic | 15.0% |
| !!! | TCATTTCAAATTTTACTTAA+CGG | - | chr1_2:12412322-12412341 | Msa0056770:intron | 15.0% |
| !!! | TATTAATAACACATTTTCTT+CGG | + | chr1_2:12412861-12412880 | None:intergenic | 15.0% |
| !! | TAACATTAACAACTATTAAT+TGG | - | chr1_2:12413370-12413389 | Msa0056770:intron | 15.0% |
| !!! | AACATAATCAACATTTTTAT+TGG | + | chr1_2:12414133-12414152 | None:intergenic | 15.0% |
| !! | TAAATTACATAAGTAATCTA+AGG | + | chr1_2:12415043-12415062 | None:intergenic | 15.0% |
| !! | AAGAATACAAAAAATGTAAA+AGG | - | chr1_2:12415662-12415681 | Msa0056770:CDS | 15.0% |
| !!! | TTTTCCATTATATTATTTCT+AGG | - | chr1_2:12416116-12416135 | Msa0056770:intron | 15.0% |
| !! | TAAACCTAGAAATAATATAA+TGG | + | chr1_2:12416123-12416142 | None:intergenic | 15.0% |
| !!! | TCTAGGTTTAAATATATTTT+TGG | - | chr1_2:12416133-12416152 | Msa0056770:intron | 15.0% |
| !!! | TTTTCTAAATTTGAGAATGA+TGG | + | chr1_2:12407298-12407317 | None:intergenic | 20.0% |
| !! | ACAATGAAAAACCAAAAATT+GGG | + | chr1_2:12407648-12407667 | None:intergenic | 20.0% |
| !! | AACAATGAAAAACCAAAAAT+TGG | + | chr1_2:12407649-12407668 | None:intergenic | 20.0% |
| !!! | TTTCATTGTTTTTAGCTAAA+TGG | - | chr1_2:12407659-12407678 | Msa0056770:CDS | 20.0% |
| !!! | TTCATTGTTTTTAGCTAAAT+GGG | - | chr1_2:12407660-12407679 | Msa0056770:CDS | 20.0% |
| !!! | GTTTTCAATTTCATAAAAGA+GGG | - | chr1_2:12407721-12407740 | Msa0056770:CDS | 20.0% |
| !!! | GATGTTATTGAATTTTGAAT+TGG | - | chr1_2:12407777-12407796 | Msa0056770:intron | 20.0% |
| !!! | TCATTTTCTCAAATTATCAT+CGG | + | chr1_2:12408069-12408088 | None:intergenic | 20.0% |
| !!! | TTTTGATAAGGAAAAAGTAT+TGG | - | chr1_2:12408211-12408230 | Msa0056770:intron | 20.0% |
| !! | ATAAATAAGTGCTTCAAAAA+CGG | + | chr1_2:12408701-12408720 | None:intergenic | 20.0% |
| !! | TTTATCCATTTGTACAAAAT+AGG | - | chr1_2:12408716-12408735 | Msa0056770:intron | 20.0% |
| !! | GTTTCTATTTCAAATTAACA+AGG | + | chr1_2:12409024-12409043 | None:intergenic | 20.0% |
| !! | AATAAATAAGATTGTTTGAG+CGG | - | chr1_2:12409057-12409076 | Msa0056770:CDS | 20.0% |
| !! | ACTTAAAAATATTATGTGCA+TGG | - | chr1_2:12409326-12409345 | Msa0056770:intron | 20.0% |
| !!! | ATATCTTTGTTTTTTCAGTT+GGG | - | chr1_2:12409488-12409507 | Msa0056770:CDS | 20.0% |
| !!! | TTAGTCTTGTATATAATTAG+TGG | - | chr1_2:12409871-12409890 | Msa0056770:CDS | 20.0% |
| !! | ATGTAAACATTTACATACTT+GGG | + | chr1_2:12409978-12409997 | None:intergenic | 20.0% |
| !! | TATGTAAACATTTACATACT+TGG | + | chr1_2:12409979-12409998 | None:intergenic | 20.0% |
| !! | AGTTAATCATTAATTAAGGT+CGG | + | chr1_2:12410039-12410058 | None:intergenic | 20.0% |
| !!! | TTAATGATTAACTTGAATTG+TGG | - | chr1_2:12410046-12410065 | Msa0056770:CDS | 20.0% |
| !! | TTCAAAATATTATCAAACAG+TGG | + | chr1_2:12410520-12410539 | None:intergenic | 20.0% |
| !!! | AAAGTATTTCAACAAAACAA+TGG | - | chr1_2:12410750-12410769 | Msa0056770:intron | 20.0% |
| !!! | TTATTTTAGTATTCTCAATG+TGG | - | chr1_2:12411753-12411772 | Msa0056770:CDS | 20.0% |
| !!! | TTCCAAAAAAGTTGATAAAT+TGG | - | chr1_2:12412113-12412132 | Msa0056770:intron | 20.0% |
| !!! | AACCAATTTATCAACTTTTT+TGG | + | chr1_2:12412118-12412137 | None:intergenic | 20.0% |
| !!! | ATAAAACATTTTGAAAATGC+AGG | - | chr1_2:12412139-12412158 | Msa0056770:intron | 20.0% |
| !!! | TTTTGGAAAAAATTATGCAT+CGG | - | chr1_2:12412190-12412209 | Msa0056770:intron | 20.0% |
| !! | CCTAGAAAAATAATATAATG+GGG | + | chr1_2:12412590-12412609 | None:intergenic | 20.0% |
| !! | CCCTAGAAAAATAATATAAT+GGG | + | chr1_2:12412591-12412610 | None:intergenic | 20.0% |
| !!! | CCCATTATATTATTTTTCTA+GGG | - | chr1_2:12412588-12412607 | Msa0056770:CDS | 20.0% |
| !!! | CCATTATATTATTTTTCTAG+GGG | - | chr1_2:12412589-12412608 | Msa0056770:CDS | 20.0% |
| !!! | CGGTATTTTTATCTTTATTA+GGG | + | chr1_2:12412841-12412860 | None:intergenic | 20.0% |
| !!! | TCGGTATTTTTATCTTTATT+AGG | + | chr1_2:12412842-12412861 | None:intergenic | 20.0% |
| !! | ATGAAAATCAAAATCATAAG+CGG | + | chr1_2:12413051-12413070 | None:intergenic | 20.0% |
| !! | ATTAAGTGAAAATGAACATT+AGG | + | chr1_2:12413502-12413521 | None:intergenic | 20.0% |
| !! | ATTAGGTTTCCAAAAATAAA+TGG | + | chr1_2:12413971-12413990 | None:intergenic | 20.0% |
| !! | TTATGTCTTTGTAATACAAT+AGG | + | chr1_2:12414657-12414676 | None:intergenic | 20.0% |
| !! | AATGAGATAATATACAGTTA+AGG | - | chr1_2:12414685-12414704 | Msa0056770:intron | 20.0% |
| !! | ATGAGATAATATACAGTTAA+GGG | - | chr1_2:12414686-12414705 | Msa0056770:intron | 20.0% |
| !! | ACTGAAATATACAACATTTA+CGG | + | chr1_2:12414857-12414876 | None:intergenic | 20.0% |
| !!! | TTCCTTCTTATAATTTTTGT+TGG | - | chr1_2:12415205-12415224 | Msa0056770:CDS | 20.0% |
| !! | ACTTTATTCCAGAATTTAAT+CGG | - | chr1_2:12415403-12415422 | Msa0056770:intron | 20.0% |
| !!! | CAACATTATCAAATTTTACA+TGG | + | chr1_2:12416271-12416290 | None:intergenic | 20.0% |
| !!! | CATGTAAAATTTGATAATGT+TGG | - | chr1_2:12416269-12416288 | Msa0056770:intron | 20.0% |
| !!! | AAATTTGATAATGTTGGAAT+TGG | - | chr1_2:12416275-12416294 | Msa0056770:intron | 20.0% |
| !!! | CAACATAAACACATATTTTA+GGG | - | chr1_2:12416395-12416414 | Msa0056770:intron | 20.0% |
| !! | GTATGAATGTTCAATAAAAA+AGG | + | chr1_2:12416570-12416589 | None:intergenic | 20.0% |
| !! | TGAAATACAAAATTATTGCA+GGG | + | chr1_2:12416637-12416656 | None:intergenic | 20.0% |
| !!! | TCTTTTAGAGATAATATGAA+TGG | + | chr1_2:12417096-12417115 | None:intergenic | 20.0% |
| !!! | AATTGTTGATGAATCAAATA+TGG | - | chr1_2:12417142-12417161 | Msa0056770:five_prime_UTR | 20.0% |
| !!! | TAACCATCAATTTTTTGAAG+AGG | - | chr1_2:12407342-12407361 | Msa0056770:three_prime_UTR | 25.0% |
| !! | GTTTTTGCTTATTACATTAC+TGG | - | chr1_2:12407559-12407578 | Msa0056770:three_prime_UTR | 25.0% |
| !! | GGTTTTCAATTTCATAAAAG+AGG | - | chr1_2:12407720-12407739 | Msa0056770:CDS | 25.0% |
| ! | ATTCTAATAGCTATGAATCA+CGG | - | chr1_2:12408008-12408027 | Msa0056770:intron | 25.0% |
| ! | CAGTCATTTGATTAATCTAA+TGG | - | chr1_2:12408256-12408275 | Msa0056770:intron | 25.0% |
| ! | TTGATTAATCTAATGGCTAA+TGG | - | chr1_2:12408263-12408282 | Msa0056770:intron | 25.0% |
| ! | AGAATTCATTAGATGGATAA+GGG | - | chr1_2:12408498-12408517 | Msa0056770:CDS | 25.0% |
| ! | AATTTCATATACCACTAAGT+CGG | + | chr1_2:12408999-12409018 | None:intergenic | 25.0% |
| !!! | ATCATTTTTTTTCTGCTTGT+TGG | + | chr1_2:12409124-12409143 | None:intergenic | 25.0% |
| !!! | TTGAATTGATTTGAGAAAAC+AGG | - | chr1_2:12409175-12409194 | Msa0056770:intron | 25.0% |
| ! | AAAACAAAGATATGCAATGA+GGG | + | chr1_2:12409481-12409500 | None:intergenic | 25.0% |
| ! | AAAAACAAAGATATGCAATG+AGG | + | chr1_2:12409482-12409501 | None:intergenic | 25.0% |
| !!! | CATATCTTTGTTTTTTCAGT+TGG | - | chr1_2:12409487-12409506 | Msa0056770:CDS | 25.0% |
| ! | TATATACAAGACTAAATGCT+GGG | + | chr1_2:12409866-12409885 | None:intergenic | 25.0% |
| ! | TTATATACAAGACTAAATGC+TGG | + | chr1_2:12409867-12409886 | None:intergenic | 25.0% |
| !!! | AAAATTCCGGTTTTAAAAGA+GGG | + | chr1_2:12410320-12410339 | None:intergenic | 25.0% |
| !!! | TAAAATTCCGGTTTTAAAAG+AGG | + | chr1_2:12410321-12410340 | None:intergenic | 25.0% |
| ! | GAGTAATACAACAATAAGAA+GGG | + | chr1_2:12410397-12410416 | None:intergenic | 25.0% |
| ! | TCACAGCTAAAATAATGTAT+CGG | + | chr1_2:12410798-12410817 | None:intergenic | 25.0% |
| ! | TTATAAGCAAGATATTTGAC+AGG | - | chr1_2:12411077-12411096 | Msa0056770:intron | 25.0% |
| !! | TAGCATTTTTAACGAAACAA+TGG | + | chr1_2:12411286-12411305 | None:intergenic | 25.0% |
| !!! | TTGGCAAGTTTTCTAAAATT+TGG | + | chr1_2:12411401-12411420 | None:intergenic | 25.0% |
| !!! | ATTTTAGGAAAAATCGGATA+TGG | - | chr1_2:12411539-12411558 | Msa0056770:intron | 25.0% |
| ! | TCAAGCATATTTCTCAAAAA+AGG | + | chr1_2:12411635-12411654 | None:intergenic | 25.0% |
| !!! | TTTTTTGAGAAATATGCTTG+AGG | - | chr1_2:12411634-12411653 | Msa0056770:intron | 25.0% |
| ! | GGTTAAAAAAAACATTGAAG+AGG | + | chr1_2:12411695-12411714 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTTTAACCGTTGA+AGG | - | chr1_2:12411700-12411719 | Msa0056770:CDS | 25.0% |
| !! | TCTTTTATTAACCAACTCAT+TGG | - | chr1_2:12411894-12411913 | Msa0056770:intron | 25.0% |
| ! | CAGTTCAAATAACAAAATAG+AGG | + | chr1_2:12411948-12411967 | None:intergenic | 25.0% |
| !!! | AGTGTTTATCTTTTGTTTTC+TGG | - | chr1_2:12411977-12411996 | Msa0056770:CDS | 25.0% |
| ! | AAAAAATTATGCATCGGATA+AGG | - | chr1_2:12412196-12412215 | Msa0056770:intron | 25.0% |
| !! | AACACTTTTGCAATATTTTC+AGG | + | chr1_2:12412289-12412308 | None:intergenic | 25.0% |
| ! | GACAGTTATATTTCCTATTA+AGG | + | chr1_2:12412557-12412576 | None:intergenic | 25.0% |
| !!! | CCCCATTATATTATTTTTCT+AGG | - | chr1_2:12412587-12412606 | Msa0056770:CDS | 25.0% |
| ! | CCCCTAGAAAAATAATATAA+TGG | + | chr1_2:12412592-12412611 | None:intergenic | 25.0% |
| !! | TCTGAACTTACATCTTTTAA+TGG | - | chr1_2:12412805-12412824 | Msa0056770:CDS | 25.0% |
| !! | CTGAACTTACATCTTTTAAT+GGG | - | chr1_2:12412806-12412825 | Msa0056770:CDS | 25.0% |
| !!! | TAACTTCAAATACTGATTCT+TGG | - | chr1_2:12412913-12412932 | Msa0056770:intron | 25.0% |
| ! | AGTTCATTCATATAACTATG+AGG | - | chr1_2:12413393-12413412 | Msa0056770:intron | 25.0% |
| ! | CATTATGCTAATATGACTAT+GGG | - | chr1_2:12413721-12413740 | Msa0056770:intron | 25.0% |
| !!! | ATGACCTAACCATTTATTTT+TGG | - | chr1_2:12413959-12413978 | Msa0056770:intron | 25.0% |
| ! | GTTTCCAAAAATAAATGGTT+AGG | + | chr1_2:12413966-12413985 | None:intergenic | 25.0% |
| ! | ATTCAATATTGTGATCAACA+TGG | - | chr1_2:12414229-12414248 | Msa0056770:intron | 25.0% |
| ! | ATATATCTTTGTCTGCTTTA+CGG | - | chr1_2:12414598-12414617 | Msa0056770:intron | 25.0% |
| ! | TCTTTGTAATACAATAGGTA+AGG | + | chr1_2:12414652-12414671 | None:intergenic | 25.0% |
| ! | AATGTTGTATATTTCAGTGT+TGG | - | chr1_2:12414859-12414878 | Msa0056770:CDS | 25.0% |
| ! | TATGAAGATGATAAAGTCAA+AGG | - | chr1_2:12414924-12414943 | Msa0056770:intron | 25.0% |
| !!! | ATCTTTTTTCCTCCTTTATT+TGG | - | chr1_2:12415078-12415097 | Msa0056770:intron | 25.0% |
| !!! | AACGTCTTTTTTCCAAATAA+AGG | + | chr1_2:12415093-12415112 | None:intergenic | 25.0% |
| ! | TGCCAACAAAAATTATAAGA+AGG | + | chr1_2:12415210-12415229 | None:intergenic | 25.0% |
| !! | AATTTTTGTTGGCAGATTTA+TGG | - | chr1_2:12415216-12415235 | Msa0056770:intron | 25.0% |
| ! | TAATAAAGACGAAAAAAACG+TGG | + | chr1_2:12416236-12416255 | None:intergenic | 25.0% |
| ! | AATATTCATTTCAGTCCTTA+CGG | - | chr1_2:12416314-12416333 | Msa0056770:intron | 25.0% |
| ! | CCTAAAATATGTGTTTATGT+TGG | + | chr1_2:12416397-12416416 | None:intergenic | 25.0% |
| !! | CCAACATAAACACATATTTT+AGG | - | chr1_2:12416394-12416413 | Msa0056770:intron | 25.0% |
| ! | TTAAAGGGATTAAAAGCAAA+AGG | - | chr1_2:12416486-12416505 | Msa0056770:intron | 25.0% |
| ! | ATGTTCAATAAAAAAGGACA+AGG | + | chr1_2:12416564-12416583 | None:intergenic | 25.0% |
| ! | ATACAAAGTCTTAGTAAATG+AGG | - | chr1_2:12416586-12416605 | Msa0056770:CDS | 25.0% |
| ! | CTGAAATACAAAATTATTGC+AGG | + | chr1_2:12416638-12416657 | None:intergenic | 25.0% |
| !! | CTGCAATAATTTTGTATTTC+AGG | - | chr1_2:12416636-12416655 | Msa0056770:intron | 25.0% |
| !! | TTACAATAATTTGTACAGCA+GGG | - | chr1_2:12416848-12416867 | Msa0056770:CDS | 25.0% |
| !! | TATTATCTCTAAAAGATGAG+AGG | - | chr1_2:12417100-12417119 | Msa0056770:five_prime_UTR | 25.0% |
| !! | ATTATCTCTAAAAGATGAGA+GGG | - | chr1_2:12417101-12417120 | Msa0056770:five_prime_UTR | 25.0% |
| ! | ATGCAAGTGAAATCCAATTT+TGG | - | chr1_2:12407170-12407189 | Msa0056770:three_prime_UTR | 30.0% |
| ! | TGAAAGACTTGTTCCAAAAT+TGG | + | chr1_2:12407186-12407205 | None:intergenic | 30.0% |
| TATGGATAAAGTTAGAGAAG+AGG | + | chr1_2:12407220-12407239 | None:intergenic | 30.0% | |
| ATGCCTCTTCAAAAAATTGA+TGG | + | chr1_2:12407348-12407367 | None:intergenic | 30.0% | |
| ATGAGAATTGATCAAGAAAG+TGG | - | chr1_2:12407508-12407527 | Msa0056770:three_prime_UTR | 30.0% | |
| ! | TCTCAATTCATCCCAATTTT+TGG | - | chr1_2:12407634-12407653 | Msa0056770:CDS | 30.0% |
| !!! | TTTTTAGCTAAATGGGTCAT+TGG | - | chr1_2:12407667-12407686 | Msa0056770:CDS | 30.0% |
| !! | AGGGACAAAATTGATTTGAA+GGG | - | chr1_2:12407740-12407759 | Msa0056770:CDS | 30.0% |
| TTGAATTGGAATGAATGTGT+AGG | - | chr1_2:12407791-12407810 | Msa0056770:intron | 30.0% | |
| TCAGATGTGAAAACAAAATC+AGG | + | chr1_2:12407870-12407889 | None:intergenic | 30.0% | |
| GAAAATGACATAATGTGTCT+AGG | - | chr1_2:12408081-12408100 | Msa0056770:intron | 30.0% | |
| AGAAAGAGAGAAAACACAAT+AGG | - | chr1_2:12408408-12408427 | Msa0056770:intron | 30.0% | |
| GAGAATTCATTAGATGGATA+AGG | - | chr1_2:12408497-12408516 | Msa0056770:intron | 30.0% | |
| ! | AAGCACCTATTTTGTACAAA+TGG | + | chr1_2:12408724-12408743 | None:intergenic | 30.0% |
| ! | TTGTACAAAATAGGTGCTTT+TGG | - | chr1_2:12408725-12408744 | Msa0056770:intron | 30.0% |
| CATAGCCAAATACAAAACAA+GGG | + | chr1_2:12408899-12408918 | None:intergenic | 30.0% | |
| TATATACTTCCTTCCTATGT+TGG | + | chr1_2:12409357-12409376 | None:intergenic | 30.0% | |
| TTCATCATCGTTCAATAGTT+TGG | - | chr1_2:12409547-12409566 | Msa0056770:intron | 30.0% | |
| TCTCTCAAAAGAACAAACAA+TGG | + | chr1_2:12409609-12409628 | None:intergenic | 30.0% | |
| TTAGGAGTTAAATCACACTA+TGG | + | chr1_2:12410189-12410208 | None:intergenic | 30.0% | |
| AAATTCCAAGCATGTAGATT+AGG | + | chr1_2:12410207-12410226 | None:intergenic | 30.0% | |
| !!! | AAATTCCGGTTTTAAAAGAG+GGG | + | chr1_2:12410319-12410338 | None:intergenic | 30.0% |
| TGATAGAAGATGCTTCTATT+TGG | - | chr1_2:12410363-12410382 | Msa0056770:intron | 30.0% | |
| CGAGTAATACAACAATAAGA+AGG | + | chr1_2:12410398-12410417 | None:intergenic | 30.0% | |
| ! | AAGACAGTGTTGTTAAATAG+TGG | + | chr1_2:12410595-12410614 | None:intergenic | 30.0% |
| TCTTCATTTGAATCTCAGAT+TGG | - | chr1_2:12410644-12410663 | Msa0056770:CDS | 30.0% | |
| AAGGTTCTCATAAGTCAATT+TGG | - | chr1_2:12410689-12410708 | Msa0056770:intron | 30.0% | |
| ! | CATAAGTCAATTTGGCATTT+TGG | - | chr1_2:12410697-12410716 | Msa0056770:intron | 30.0% |
| !!! | TTATTTTAGCTGTGATTACG+AGG | - | chr1_2:12410803-12410822 | Msa0056770:CDS | 30.0% |
| CATATGATGTGACAAAAAGA+TGG | + | chr1_2:12411035-12411054 | None:intergenic | 30.0% | |
| ! | CATTTTTAACGAAACAATGG+TGG | + | chr1_2:12411283-12411302 | None:intergenic | 30.0% |
| AATTCTTGCTTTCATGATCA+AGG | - | chr1_2:12411343-12411362 | Msa0056770:intron | 30.0% | |
| !!! | GCAAGTTTTCTAAAATTTGG+CGG | + | chr1_2:12411398-12411417 | None:intergenic | 30.0% |
| AAAAATAAGTGCCAATGAGT+TGG | + | chr1_2:12411908-12411927 | None:intergenic | 30.0% | |
| TGTGTGTTCATATTCTTCTA+TGG | - | chr1_2:12412029-12412048 | Msa0056770:CDS | 30.0% | |
| !! | AAACATTTTGAAAATGCAGG+TGG | - | chr1_2:12412142-12412161 | Msa0056770:intron | 30.0% |
| TTTCTTGGTTGTTCCTTAAT+AGG | - | chr1_2:12412541-12412560 | Msa0056770:CDS | 30.0% | |
| !! | GAAGATTTTGACATTCTTCA+TGG | - | chr1_2:12412616-12412635 | Msa0056770:CDS | 30.0% |
| ATTCTTGGTAAAATTGTGAC+AGG | - | chr1_2:12412928-12412947 | Msa0056770:intron | 30.0% | |
| TCATCTTCATAAAGTGATGA+CGG | + | chr1_2:12413468-12413487 | None:intergenic | 30.0% | |
| ACAAATCCATGTCAAAAGTT+GGG | + | chr1_2:12413571-12413590 | None:intergenic | 30.0% | |
| ! | CATGGATTTGTCTGATTTTA+TGG | - | chr1_2:12413580-12413599 | Msa0056770:intron | 30.0% |
| ! | GATTTGTCTGATTTTATGGA+TGG | - | chr1_2:12413584-12413603 | Msa0056770:intron | 30.0% |
| TAATGGAATGCATGAGAAAA+TGG | + | chr1_2:12413706-12413725 | None:intergenic | 30.0% | |
| CCATAGTCATATTAGCATAA+TGG | + | chr1_2:12413723-12413742 | None:intergenic | 30.0% | |
| CCATTATGCTAATATGACTA+TGG | - | chr1_2:12413720-12413739 | Msa0056770:intron | 30.0% | |
| !! | TTTGGTCTTAATGACTGAAT+TGG | - | chr1_2:12413784-12413803 | Msa0056770:intron | 30.0% |
| !! | TTGGTCTTAATGACTGAATT+GGG | - | chr1_2:12413785-12413804 | Msa0056770:intron | 30.0% |
| AATTTCTGTCTTTGTAACTC+AGG | - | chr1_2:12414153-12414172 | Msa0056770:CDS | 30.0% | |
| TGTAACTCAGGATTGAATAT+CGG | - | chr1_2:12414165-12414184 | Msa0056770:intron | 30.0% | |
| ATTCTCTTACAATTTCCATC+AGG | - | chr1_2:12414302-12414321 | Msa0056770:CDS | 30.0% | |
| AATCATAGCAAGAAGTTTGT+TGG | + | chr1_2:12414394-12414413 | None:intergenic | 30.0% | |
| TTTAGACTTCAGACTCAATA+TGG | - | chr1_2:12414464-12414483 | Msa0056770:CDS | 30.0% | |
| !! | TATACAGTTAAGGGTATCAT+TGG | - | chr1_2:12414695-12414714 | Msa0056770:intron | 30.0% |
| TATCATCTTCATACCCATAA+AGG | + | chr1_2:12414917-12414936 | None:intergenic | 30.0% | |
| ATCATCTTGTTCTACTTCAT+CGG | + | chr1_2:12414995-12415014 | None:intergenic | 30.0% | |
| TATGTAATTTAACACCTCAC+AGG | - | chr1_2:12415052-12415071 | Msa0056770:intron | 30.0% | |
| !!! | GTCTTTTTTCCAAATAAAGG+AGG | + | chr1_2:12415090-12415109 | None:intergenic | 30.0% |
| TCACATCAAAATGTAAAGCA+TGG | + | chr1_2:12415177-12415196 | None:intergenic | 30.0% | |
| TAAAAATTGACCACCATCAA+TGG | + | chr1_2:12415269-12415288 | None:intergenic | 30.0% | |
| !!! | TGATGGTGGTCAATTTTTAA+AGG | - | chr1_2:12415270-12415289 | Msa0056770:intron | 30.0% |
| TTCTCATCAATAATAGTGAC+AGG | + | chr1_2:12415316-12415335 | None:intergenic | 30.0% | |
| TCATTGATAGGATGTAATGT+GGG | + | chr1_2:12415361-12415380 | None:intergenic | 30.0% | |
| TTCATTGATAGGATGTAATG+TGG | + | chr1_2:12415362-12415381 | None:intergenic | 30.0% | |
| ! | ACTCGGAAATTTTCATTGAT+AGG | + | chr1_2:12415373-12415392 | None:intergenic | 30.0% |
| CATATTATGGCAAAGGAATT+AGG | + | chr1_2:12415474-12415493 | None:intergenic | 30.0% | |
| CTAATTCCTTTGCCATAATA+TGG | - | chr1_2:12415472-12415491 | Msa0056770:CDS | 30.0% | |
| ACTGATCAACTTAACTCTTT+AGG | - | chr1_2:12415535-12415554 | Msa0056770:intron | 30.0% | |
| TTTAGGAGAATTGCTATATC+AGG | - | chr1_2:12415552-12415571 | Msa0056770:intron | 30.0% | |
| GAAATCCTTCATATCTCTTT+CGG | - | chr1_2:12415971-12415990 | Msa0056770:intron | 30.0% | |
| AAATCCTTCATATCTCTTTC+GGG | - | chr1_2:12415972-12415991 | Msa0056770:intron | 30.0% | |
| TTTCATACAATGGAACTATG+AGG | + | chr1_2:12416035-12416054 | None:intergenic | 30.0% | |
| ! | CAACTTTAGGTTTCATACAA+TGG | + | chr1_2:12416045-12416064 | None:intergenic | 30.0% |
| ATCAAGAAAGACACAACTTT+AGG | + | chr1_2:12416058-12416077 | None:intergenic | 30.0% | |
| TAAAGTTGTGTCTTTCTTGA+TGG | - | chr1_2:12416057-12416076 | Msa0056770:intron | 30.0% | |
| ! | AAGTTGTCTTTTCAATGTCT+TGG | + | chr1_2:12416096-12416115 | None:intergenic | 30.0% |
| GTAAGGACTGAAATGAATAT+TGG | + | chr1_2:12416315-12416334 | None:intergenic | 30.0% | |
| GTGTTTATGTTGGAATTGAT+CGG | + | chr1_2:12416387-12416406 | None:intergenic | 30.0% | |
| TAGGGACTTAACAAAACAAA+AGG | - | chr1_2:12416413-12416432 | Msa0056770:intron | 30.0% | |
| !!! | AACACTGTCAATTTTTTTGG+GGG | + | chr1_2:12416767-12416786 | None:intergenic | 30.0% |
| !!! | CAACACTGTCAATTTTTTTG+GGG | + | chr1_2:12416768-12416787 | None:intergenic | 30.0% |
| !!! | CCAACACTGTCAATTTTTTT+GGG | + | chr1_2:12416769-12416788 | None:intergenic | 30.0% |
| CCAAAAAAATTGACAGTGTT+GGG | - | chr1_2:12416767-12416786 | Msa0056770:intron | 30.0% | |
| CAAAAAAATTGACAGTGTTG+GGG | - | chr1_2:12416768-12416787 | Msa0056770:intron | 30.0% | |
| ! | CTTACAATAATTTGTACAGC+AGG | - | chr1_2:12416847-12416866 | Msa0056770:CDS | 30.0% |
| CATGACTGAAAATATCACAA+AGG | + | chr1_2:12416893-12416912 | None:intergenic | 30.0% | |
| ! | CTTTGTGATATTTTCAGTCA+TGG | - | chr1_2:12416891-12416910 | Msa0056770:CDS | 30.0% |
| TAAATGTAAACTGTGAAGCA+AGG | - | chr1_2:12416944-12416963 | Msa0056770:five_prime_UTR | 30.0% | |
| GCTGTTCATGGAAATAATAT+TGG | - | chr1_2:12416989-12417008 | Msa0056770:five_prime_UTR | 30.0% | |
| AGTATGACTTTGTATGACTT+TGG | - | chr1_2:12417037-12417056 | Msa0056770:five_prime_UTR | 30.0% | |
| GAGATAATATGAATGGTCAA+AGG | + | chr1_2:12417089-12417108 | None:intergenic | 30.0% | |
| GATTTCACTTGCATACTACT+AGG | + | chr1_2:12407164-12407183 | None:intergenic | 35.0% | |
| CTAGGTTGTTACATAGGATA+TGG | + | chr1_2:12407238-12407257 | None:intergenic | 35.0% | |
| ! | TGATGATGAAAACGATGACT+AGG | + | chr1_2:12407256-12407275 | None:intergenic | 35.0% |
| GCTTATTACATTACTGGTCA+TGG | - | chr1_2:12407565-12407584 | Msa0056770:three_prime_UTR | 35.0% | |
| ! | TACATTACTGGTCATGGTTT+TGG | - | chr1_2:12407571-12407590 | Msa0056770:three_prime_UTR | 35.0% |
| !! | GAGGGACAAAATTGATTTGA+AGG | - | chr1_2:12407739-12407758 | Msa0056770:CDS | 35.0% |
| AATTGGAATGAATGTGTAGG+TGG | - | chr1_2:12407794-12407813 | Msa0056770:intron | 35.0% | |
| TCCTAGATTATTCATTCGCA+AGG | - | chr1_2:12407899-12407918 | Msa0056770:intron | 35.0% | |
| ACCTTGCGAATGAATAATCT+AGG | + | chr1_2:12407903-12407922 | None:intergenic | 35.0% | |
| TACAAAGCACAAACACTTCT+CGG | + | chr1_2:12408153-12408172 | None:intergenic | 35.0% | |
| ! | CTCTAACGACTGAGATTTTA+TGG | - | chr1_2:12408306-12408325 | Msa0056770:intron | 35.0% |
| CATATCTATGAGAAAGAGTG+AGG | - | chr1_2:12408453-12408472 | Msa0056770:intron | 35.0% | |
| !!! | CTGATCCCTTGTTTTGTATT+TGG | - | chr1_2:12408891-12408910 | Msa0056770:CDS | 35.0% |
| CCATAGCCAAATACAAAACA+AGG | + | chr1_2:12408900-12408919 | None:intergenic | 35.0% | |
| !!! | CCTTGTTTTGTATTTGGCTA+TGG | - | chr1_2:12408897-12408916 | Msa0056770:CDS | 35.0% |
| TTTGATTGAGTTCAGCCATT+CGG | + | chr1_2:12408975-12408994 | None:intergenic | 35.0% | |
| ATGGTAAAACCAACATAGGA+AGG | - | chr1_2:12409345-12409364 | Msa0056770:intron | 35.0% | |
| TCTCACTCAAAAGAAATGAC+TGG | + | chr1_2:12409775-12409794 | None:intergenic | 35.0% | |
| ACGAATAAGGAACTCACAAT+GGG | + | chr1_2:12409941-12409960 | None:intergenic | 35.0% | |
| GAATAGATCCATTGTGGTTT+GGG | + | chr1_2:12410167-12410186 | None:intergenic | 35.0% | |
| ACTATGGAATAGATCCATTG+TGG | + | chr1_2:12410173-12410192 | None:intergenic | 35.0% | |
| TAACTCCTAATCTACATGCT+TGG | - | chr1_2:12410199-12410218 | Msa0056770:intron | 35.0% | |
| ! | AATTTCGCTTGTTGAAGGTA+AGG | - | chr1_2:12410222-12410241 | Msa0056770:CDS | 35.0% |
| AAGCTCGTTATTCTCAACTT+TGG | - | chr1_2:12410272-12410291 | Msa0056770:intron | 35.0% | |
| !!! | TAGATCCCCTCTTTTAAAAC+CGG | - | chr1_2:12410311-12410330 | Msa0056770:intron | 35.0% |
| TCATTTGAATCTCAGATTGG+TGG | - | chr1_2:12410647-12410666 | Msa0056770:intron | 35.0% | |
| !!! | CATGTTTTGGTTTTGCTTCA+AGG | - | chr1_2:12410670-12410689 | Msa0056770:intron | 35.0% |
| ! | AAGCTTGATTACTAGTTTGG+TGG | - | chr1_2:12410721-12410740 | Msa0056770:intron | 35.0% |
| ! | AGCTTGATTACTAGTTTGGT+GGG | - | chr1_2:12410722-12410741 | Msa0056770:intron | 35.0% |
| !!! | AGGTTTTAAAACTGTACCTG+TGG | - | chr1_2:12410823-12410842 | Msa0056770:CDS | 35.0% |
| TCAGAGACAGAACAACATAT+TGG | + | chr1_2:12411178-12411197 | None:intergenic | 35.0% | |
| ! | TCTTTTATCTTCCATCCTGA+TGG | + | chr1_2:12411220-12411239 | None:intergenic | 35.0% |
| AAAGAAGATTTCTTACCTCC+TGG | - | chr1_2:12411235-12411254 | Msa0056770:intron | 35.0% | |
| !!! | GTTTTCTAAAATTTGGCGGA+AGG | + | chr1_2:12411394-12411413 | None:intergenic | 35.0% |
| TCTCTACGTACAAAGACAAA+GGG | + | chr1_2:12411596-12411615 | None:intergenic | 35.0% | |
| ATCTCTACGTACAAAGACAA+AGG | + | chr1_2:12411597-12411616 | None:intergenic | 35.0% | |
| CTATCTTGTAAGACCTTCAA+CGG | + | chr1_2:12411716-12411735 | None:intergenic | 35.0% | |
| ATCAGGAGAGATTTAATCAC+CGG | - | chr1_2:12411786-12411805 | Msa0056770:CDS | 35.0% | |
| TTATGCATCGGATAAGGTAA+AGG | - | chr1_2:12412202-12412221 | Msa0056770:intron | 35.0% | |
| GTAACTAGATAGCAATCACA+GGG | + | chr1_2:12412228-12412247 | None:intergenic | 35.0% | |
| TGTAACTAGATAGCAATCAC+AGG | + | chr1_2:12412229-12412248 | None:intergenic | 35.0% | |
| TTCTTGGTTATCAACTCCAA+AGG | - | chr1_2:12412386-12412405 | Msa0056770:intron | 35.0% | |
| TCTTGGTTATCAACTCCAAA+GGG | - | chr1_2:12412387-12412406 | Msa0056770:intron | 35.0% | |
| !! | ATTCTGGGATAGCAATATCT+CGG | + | chr1_2:12412420-12412439 | None:intergenic | 35.0% |
| ! | TCCTGTGCGTATAATTTTCT+TGG | - | chr1_2:12412526-12412545 | Msa0056770:intron | 35.0% |
| ACCAAGAAAATTATACGCAC+AGG | + | chr1_2:12412530-12412549 | None:intergenic | 35.0% | |
| ATTCTTCATGGAGATGTTCA+AGG | - | chr1_2:12412628-12412647 | Msa0056770:CDS | 35.0% | |
| TGCAGCTAATCTCTTCAATT+GGG | - | chr1_2:12412726-12412745 | Msa0056770:intron | 35.0% | |
| TTGATTCCCTACAGTTTCAA+CGG | - | chr1_2:12413076-12413095 | Msa0056770:intron | 35.0% | |
| ACATGACAAGCTTCTCTAAT+TGG | + | chr1_2:12413202-12413221 | None:intergenic | 35.0% | |
| CAAATCCATGTCAAAAGTTG+GGG | + | chr1_2:12413570-12413589 | None:intergenic | 35.0% | |
| GACAAATCCATGTCAAAAGT+TGG | + | chr1_2:12413572-12413591 | None:intergenic | 35.0% | |
| ! | TTGTCTGATTTTATGGATGG+AGG | - | chr1_2:12413587-12413606 | Msa0056770:intron | 35.0% |
| !!! | CATTAGTGTTACCGACTTTT+GGG | + | chr1_2:12413663-12413682 | None:intergenic | 35.0% |
| ! | ATATGTTGCTGGAGCAATTT+TGG | - | chr1_2:12413766-12413785 | Msa0056770:intron | 35.0% |
| TGAATTGGGTGTGAAATTTG+AGG | - | chr1_2:12413799-12413818 | Msa0056770:intron | 35.0% | |
| GAATATCCACGAGAACAATT+AGG | + | chr1_2:12413988-12414007 | None:intergenic | 35.0% | |
| TTGAATAGAGTCTAACCTTC+TGG | + | chr1_2:12414215-12414234 | None:intergenic | 35.0% | |
| TGCATGCTACAAATAACACA+GGG | + | chr1_2:12414258-12414277 | None:intergenic | 35.0% | |
| ATGCATGCTACAAATAACAC+AGG | + | chr1_2:12414259-12414278 | None:intergenic | 35.0% | |
| ! | GTTGTATATTTCAGTGTTGG+AGG | - | chr1_2:12414862-12414881 | Msa0056770:CDS | 35.0% |
| TACCCATAAAGGTTCCAATT+CGG | + | chr1_2:12414906-12414925 | None:intergenic | 35.0% | |
| GGAAAAAAGATTTACCTGTG+AGG | + | chr1_2:12415069-12415088 | None:intergenic | 35.0% | |
| CAATGAAAATTTCCGAGTCA+AGG | - | chr1_2:12415375-12415394 | Msa0056770:intron | 35.0% | |
| AAAATTTCCGAGTCAAGGTT+AGG | - | chr1_2:12415380-12415399 | Msa0056770:intron | 35.0% | |
| ATAAAGTCCTAACCTTGACT+CGG | + | chr1_2:12415390-12415409 | None:intergenic | 35.0% | |
| GCTTGTAACCGATTAAATTC+TGG | + | chr1_2:12415414-12415433 | None:intergenic | 35.0% | |
| TGCATACCATATTATGGCAA+AGG | + | chr1_2:12415481-12415500 | None:intergenic | 35.0% | |
| AAGGTCTGCATACCATATTA+TGG | + | chr1_2:12415487-12415506 | None:intergenic | 35.0% | |
| CTTCAAATCACTTCTGACAT+CGG | - | chr1_2:12415504-12415523 | Msa0056770:intron | 35.0% | |
| ! | GAGCAGTGAACAAATTTTTC+AGG | - | chr1_2:12415902-12415921 | Msa0056770:intron | 35.0% |
| CCCAAAAAAATTGACAGTGT+TGG | - | chr1_2:12416766-12416785 | Msa0056770:intron | 35.0% | |
| !!! | CCCAACACTGTCAATTTTTT+TGG | + | chr1_2:12416770-12416789 | None:intergenic | 35.0% |
| ! | ACAGCAGGGTAAATTTTTGA+AGG | - | chr1_2:12416862-12416881 | Msa0056770:CDS | 35.0% |
| AAGCCAGCTAATTTCTATTC+TGG | + | chr1_2:12416917-12416936 | None:intergenic | 35.0% | |
| !! | ATAGAAATTAGCTGGCTTGA+TGG | - | chr1_2:12416919-12416938 | Msa0056770:five_prime_UTR | 35.0% |
| GAAGCAAGGAACAAAGATTA+TGG | - | chr1_2:12416958-12416977 | Msa0056770:five_prime_UTR | 35.0% | |
| !!! | GAGAGGGACTTTTTTATGAA+AGG | - | chr1_2:12417117-12417136 | Msa0056770:five_prime_UTR | 35.0% |
| TTCACTTGCATACTACTAGG+AGG | + | chr1_2:12407161-12407180 | None:intergenic | 40.0% | |
| CGATGACTAGGTTGTTACAT+AGG | + | chr1_2:12407244-12407263 | None:intergenic | 40.0% | |
| ! | CATGATGTGCATTTGGTAAC+TGG | - | chr1_2:12407840-12407859 | Msa0056770:intron | 40.0% |
| TAGCTATGAATCACGGAAAC+CGG | - | chr1_2:12408015-12408034 | Msa0056770:intron | 40.0% | |
| TAATGTGTCTAGGTCGTGTT+TGG | - | chr1_2:12408091-12408110 | Msa0056770:intron | 40.0% | |
| !! | GAGAAGTGTTTGTGCTTTGT+AGG | - | chr1_2:12408152-12408171 | Msa0056770:intron | 40.0% |
| ! | ACGACTGAGATTTTATGGAG+AGG | - | chr1_2:12408311-12408330 | Msa0056770:intron | 40.0% |
| ACACAATAGGTGATCTTAGC+TGG | - | chr1_2:12408421-12408440 | Msa0056770:intron | 40.0% | |
| CACAATAGGTGATCTTAGCT+GGG | - | chr1_2:12408422-12408441 | Msa0056770:intron | 40.0% | |
| ACAATAGGTGATCTTAGCTG+GGG | - | chr1_2:12408423-12408442 | Msa0056770:intron | 40.0% | |
| AGGAAAAAAAGAGCGAGAGA+GGG | - | chr1_2:12408473-12408492 | Msa0056770:intron | 40.0% | |
| GAGGGAGAGAATTCATTAGA+TGG | - | chr1_2:12408491-12408510 | Msa0056770:intron | 40.0% | |
| TAATCACAAGCTACACGGAT+AGG | + | chr1_2:12408564-12408583 | None:intergenic | 40.0% | |
| ! | ATCCGTGTAGCTTGTGATTA+CGG | - | chr1_2:12408564-12408583 | Msa0056770:CDS | 40.0% |
| AACCGTAATCACAAGCTACA+CGG | + | chr1_2:12408569-12408588 | None:intergenic | 40.0% | |
| ! | AAATAGGTGCTTTTGGACTG+TGG | - | chr1_2:12408732-12408751 | Msa0056770:intron | 40.0% |
| TTACCTTCTCCAAAGAAGCA+AGG | + | chr1_2:12408791-12408810 | None:intergenic | 40.0% | |
| TGATGTCAAGATTTGAGCTC+GGG | + | chr1_2:12408948-12408967 | None:intergenic | 40.0% | |
| CTGATGTCAAGATTTGAGCT+CGG | + | chr1_2:12408949-12408968 | None:intergenic | 40.0% | |
| TCTTGACATCAGAAACCGAA+TGG | - | chr1_2:12408957-12408976 | Msa0056770:intron | 40.0% | |
| CGGATGCAAGTCAAATTGAA+GGG | - | chr1_2:12409077-12409096 | Msa0056770:CDS | 40.0% | |
| GGGAAACCATCATATGACTA+AGG | - | chr1_2:12409097-12409116 | Msa0056770:CDS | 40.0% | |
| GTTGGTCCTTAGTCATATGA+TGG | + | chr1_2:12409106-12409125 | None:intergenic | 40.0% | |
| CTGTCTGTGTGACAAATTTC+AGG | - | chr1_2:12409252-12409271 | Msa0056770:intron | 40.0% | |
| GTGCATGGTAAAACCAACAT+AGG | - | chr1_2:12409341-12409360 | Msa0056770:intron | 40.0% | |
| ACAGACACTTCACAAAGACA+CGG | + | chr1_2:12409454-12409473 | None:intergenic | 40.0% | |
| TCATCGTTCAATAGTTTGGC+AGG | - | chr1_2:12409551-12409570 | Msa0056770:intron | 40.0% | |
| ! | TGTGCTCTCTTGATAATCCT+CGG | - | chr1_2:12409717-12409736 | Msa0056770:intron | 40.0% |
| GACGAATAAGGAACTCACAA+TGG | + | chr1_2:12409942-12409961 | None:intergenic | 40.0% | |
| TACATACTTGGGCAATATCC+CGG | + | chr1_2:12409967-12409986 | None:intergenic | 40.0% | |
| GCACTGTCTCAAATAATGCT+AGG | + | chr1_2:12410017-12410036 | None:intergenic | 40.0% | |
| ! | AAAGCAGGCACTGCAAATAT+CGG | + | chr1_2:12410077-12410096 | None:intergenic | 40.0% |
| TCAATAACATCGCGAAAAGC+AGG | + | chr1_2:12410092-12410111 | None:intergenic | 40.0% | |
| CGATGTTATTGATGTCCCTT+TGG | - | chr1_2:12410100-12410119 | Msa0056770:intron | 40.0% | |
| TGTTATTGATGTCCCTTTGG+TGG | - | chr1_2:12410103-12410122 | Msa0056770:intron | 40.0% | |
| GCTACACAAATCTGCAAAAG+AGG | - | chr1_2:12410133-12410152 | Msa0056770:intron | 40.0% | |
| GGAATAGATCCATTGTGGTT+TGG | + | chr1_2:12410168-12410187 | None:intergenic | 40.0% | |
| ! | CTTGGAATTTCGCTTGTTGA+AGG | - | chr1_2:12410217-12410236 | Msa0056770:CDS | 40.0% |
| CTCGTTATTCTCAACTTTGG+TGG | - | chr1_2:12410275-12410294 | Msa0056770:intron | 40.0% | |
| !!! | GGTTTTAAAAGAGGGGATCT+AGG | + | chr1_2:12410312-12410331 | None:intergenic | 40.0% |
| AGAATCAGTGTTGTCAATCG+CGG | - | chr1_2:12410432-12410451 | Msa0056770:intron | 40.0% | |
| !! | AACCAACTGCTGTGTTTTTG+CGG | + | chr1_2:12410459-12410478 | None:intergenic | 40.0% |
| !! | TATCAAACAGTGGCTTTAGC+AGG | + | chr1_2:12410510-12410529 | None:intergenic | 40.0% |
| GGCAAGCTTGATTACTAGTT+TGG | - | chr1_2:12410718-12410737 | Msa0056770:intron | 40.0% | |
| ! | GATTACTAGTTTGGTGGGAA+TGG | - | chr1_2:12410727-12410746 | Msa0056770:intron | 40.0% |
| TTAAAACTGTACCTGTGGAC+TGG | - | chr1_2:12410828-12410847 | Msa0056770:CDS | 40.0% | |
| GAGTTGCTTATGCCAACAAT+TGG | + | chr1_2:12410876-12410895 | None:intergenic | 40.0% | |
| GATGATGCCATAAGTTTGTC+CGG | + | chr1_2:12410932-12410951 | None:intergenic | 40.0% | |
| !! | ATGAGCACTGCAGATTTTAC+AGG | + | chr1_2:12410991-12411010 | None:intergenic | 40.0% |
| AAGATTTCTTACCTCCTGGT+TGG | - | chr1_2:12411239-12411258 | Msa0056770:intron | 40.0% | |
| GCTTTCATGATCAAGGTTTG+TGG | - | chr1_2:12411350-12411369 | Msa0056770:intron | 40.0% | |
| TCACATGCTGCAATAATGTC+GGG | + | chr1_2:12411437-12411456 | None:intergenic | 40.0% | |
| GTCACATGCTGCAATAATGT+CGG | + | chr1_2:12411438-12411457 | None:intergenic | 40.0% | |
| ! | AATGTGGTGTCGAAATGATC+AGG | - | chr1_2:12411769-12411788 | Msa0056770:CDS | 40.0% |
| CTTATCGCACGTTCAAGATA+AGG | + | chr1_2:12411822-12411841 | None:intergenic | 40.0% | |
| TTGAAACCCTGCTATGATAC+AGG | - | chr1_2:12411843-12411862 | Msa0056770:intron | 40.0% | |
| TTGATGCCTGTATCATAGCA+GGG | + | chr1_2:12411852-12411871 | None:intergenic | 40.0% | |
| ATTGATGCCTGTATCATAGC+AGG | + | chr1_2:12411853-12411872 | None:intergenic | 40.0% | |
| TGCTATGATACAGGCATCAA+TGG | - | chr1_2:12411852-12411871 | Msa0056770:intron | 40.0% | |
| TATGATACAGGCATCAATGG+TGG | - | chr1_2:12411855-12411874 | Msa0056770:intron | 40.0% | |
| CATGTAAAACGCTGATCGTA+AGG | + | chr1_2:12412070-12412089 | None:intergenic | 40.0% | |
| TTGCGTGATGCAATAGTTCT+TGG | - | chr1_2:12412370-12412389 | Msa0056770:intron | 40.0% | |
| GAGATATTGCTATCCCAGAA+TGG | - | chr1_2:12412419-12412438 | Msa0056770:intron | 40.0% | |
| TGTAAGAATGCCACAGTATC+TGG | + | chr1_2:12412658-12412677 | None:intergenic | 40.0% | |
| TGTATGCTTCACAACCAACT+CGG | + | chr1_2:12412689-12412708 | None:intergenic | 40.0% | |
| CTGCAGCTAATCTCTTCAAT+TGG | - | chr1_2:12412725-12412744 | Msa0056770:intron | 40.0% | |
| AGCTAATCTCTTCAATTGGG+AGG | - | chr1_2:12412729-12412748 | Msa0056770:intron | 40.0% | |
| ! | ATTTTTGTTACGAGAGCTCC+TGG | - | chr1_2:12412956-12412975 | Msa0056770:CDS | 40.0% |
| TCCTGGAAGGTTAGATGTAA+TGG | - | chr1_2:12412973-12412992 | Msa0056770:CDS | 40.0% | |
| CCTGGAAGGTTAGATGTAAT+GGG | - | chr1_2:12412974-12412993 | Msa0056770:CDS | 40.0% | |
| AGATGACCGTTGAAACTGTA+GGG | + | chr1_2:12413085-12413104 | None:intergenic | 40.0% | |
| AAGATGACCGTTGAAACTGT+AGG | + | chr1_2:12413086-12413105 | None:intergenic | 40.0% | |
| TTCCACAGTCTATGCTTACT+CGG | + | chr1_2:12413244-12413263 | None:intergenic | 40.0% | |
| CTTGCTTTCTCATACGAGAT+TGG | + | chr1_2:12413617-12413636 | None:intergenic | 40.0% | |
| !!! | GCATTAGTGTTACCGACTTT+TGG | + | chr1_2:12413664-12413683 | None:intergenic | 40.0% |
| ATGATACACCTTTCCCTTCT+GGG | + | chr1_2:12413856-12413875 | None:intergenic | 40.0% | |
| TGGAAACCTAATTGTTCTCG+TGG | - | chr1_2:12413979-12413998 | Msa0056770:intron | 40.0% | |
| !! | AGGATTGAATATCGGCTCAA+GGG | - | chr1_2:12414173-12414192 | Msa0056770:intron | 40.0% |
| CTCTTACAATTTCCATCAGG+TGG | - | chr1_2:12414305-12414324 | Msa0056770:CDS | 40.0% | |
| ! | ACTTCTTGCTATGATTTGCC+AGG | - | chr1_2:12414398-12414417 | Msa0056770:intron | 40.0% |
| AGCTTGTAATGATGCAAACC+TGG | + | chr1_2:12414419-12414438 | None:intergenic | 40.0% | |
| TCGAAATTCCCAACCATATC+CGG | - | chr1_2:12414530-12414549 | Msa0056770:intron | 40.0% | |
| TTGATTCCGGAATAAGACAC+AGG | - | chr1_2:12414563-12414582 | Msa0056770:intron | 40.0% | |
| ! | AACCAACCTGTGTCTTATTC+CGG | + | chr1_2:12414572-12414591 | None:intergenic | 40.0% |
| AGTTGTATTTGAAAGCAGCG+TGG | - | chr1_2:12414826-12414845 | Msa0056770:intron | 40.0% | |
| GATTATGGATCTGTCCGAAT+TGG | - | chr1_2:12414889-12414908 | Msa0056770:CDS | 40.0% | |
| TGTCCGAATTGGAACCTTTA+TGG | - | chr1_2:12414900-12414919 | Msa0056770:intron | 40.0% | |
| GTCCGAATTGGAACCTTTAT+GGG | - | chr1_2:12414901-12414920 | Msa0056770:intron | 40.0% | |
| GATAAAGTCAAAGGCTTCCA+CGG | - | chr1_2:12414933-12414952 | Msa0056770:intron | 40.0% | |
| ACACTTCCTGAAACCATTGA+TGG | - | chr1_2:12415253-12415272 | Msa0056770:intron | 40.0% | |
| CGATGTCAGAAGTGATTTGA+AGG | + | chr1_2:12415506-12415525 | None:intergenic | 40.0% | |
| CCTCAAATATGAACTCCGTA+AGG | + | chr1_2:12416332-12416351 | None:intergenic | 40.0% | |
| CCTTACGGAGTTCATATTTG+AGG | - | chr1_2:12416329-12416348 | Msa0056770:intron | 40.0% | |
| !! | TTGTATTTCAGGTTCAGCAG+AGG | - | chr1_2:12416647-12416666 | Msa0056770:intron | 40.0% |
| ! | CAGAGGTACAAAAAAGCTAC+CGG | - | chr1_2:12416664-12416683 | Msa0056770:intron | 40.0% |
| GAAAAGAAACGGCAAGTAAC+CGG | + | chr1_2:12416686-12416705 | None:intergenic | 40.0% | |
| !! | TTACTTGCCGTTTCTTTTCG+AGG | - | chr1_2:12416687-12416706 | Msa0056770:intron | 40.0% |
| !! | TACTTGCCGTTTCTTTTCGA+GGG | - | chr1_2:12416688-12416707 | Msa0056770:intron | 40.0% |
| CAGAGAAGAAAAGCTGATCA+TGG | - | chr1_2:12416809-12416828 | Msa0056770:CDS | 40.0% | |
| TGGCCAGAATAGAAATTAGC+TGG | - | chr1_2:12416911-12416930 | Msa0056770:exon | 40.0% | |
| ATGGTGAAAGAAGCTGTTCA+TGG | - | chr1_2:12416977-12416996 | Msa0056770:five_prime_UTR | 40.0% | |
| ! | TTTGGTGCGTATTTGCAAAG+TGG | - | chr1_2:12417055-12417074 | Msa0056770:five_prime_UTR | 40.0% |
| TATGAATGGTCAAAGGACGA+AGG | + | chr1_2:12417082-12417101 | None:intergenic | 40.0% | |
| ! | TTTTACCTCTGTGACACGAG+TGG | + | chr1_2:12407602-12407621 | None:intergenic | 45.0% |
| GAATGAATGTGTAGGTGGCA+AGG | - | chr1_2:12407799-12407818 | Msa0056770:intron | 45.0% | |
| TGCAGGACATGATGTGCATT+TGG | - | chr1_2:12407833-12407852 | Msa0056770:intron | 45.0% | |
| GCACAAACACTTCTCGGATT+AGG | + | chr1_2:12408147-12408166 | None:intergenic | 45.0% | |
| CTAATGGCTAATGGCTCTCT+TGG | - | chr1_2:12408272-12408291 | Msa0056770:intron | 45.0% | |
| GATCCAAGTCCATAGTCTAG+AGG | - | chr1_2:12408333-12408352 | Msa0056770:intron | 45.0% | |
| CAACCTCTAGACTATGGACT+TGG | + | chr1_2:12408339-12408358 | None:intergenic | 45.0% | |
| CAAGTCCATAGTCTAGAGGT+TGG | - | chr1_2:12408337-12408356 | Msa0056770:intron | 45.0% | |
| ACGATCCAACCTCTAGACTA+TGG | + | chr1_2:12408345-12408364 | None:intergenic | 45.0% | |
| CAATAGGTGATCTTAGCTGG+GGG | - | chr1_2:12408424-12408443 | Msa0056770:intron | 45.0% | |
| GAGGAAAAAAAGAGCGAGAG+AGG | - | chr1_2:12408472-12408491 | Msa0056770:intron | 45.0% | |
| TGTAAAGAGACTTGCCAGAG+AGG | - | chr1_2:12408522-12408541 | Msa0056770:CDS | 45.0% | |
| GTAAAGAGACTTGCCAGAGA+GGG | - | chr1_2:12408523-12408542 | Msa0056770:CDS | 45.0% | |
| !! | ACACGGATAGGCTTTAAGGA+CGG | + | chr1_2:12408552-12408571 | None:intergenic | 45.0% |
| AGCTACACGGATAGGCTTTA+AGG | + | chr1_2:12408556-12408575 | None:intergenic | 45.0% | |
| GATGTCAAGATTTGAGCTCG+GGG | + | chr1_2:12408947-12408966 | None:intergenic | 45.0% | |
| ! | CTCAATCAAAGCCGACTTAG+TGG | - | chr1_2:12408985-12409004 | Msa0056770:intron | 45.0% |
| GCGGATGCAAGTCAAATTGA+AGG | - | chr1_2:12409076-12409095 | Msa0056770:CDS | 45.0% | |
| ACATGCAACCGGAACAACAT+CGG | + | chr1_2:12409204-12409223 | None:intergenic | 45.0% | |
| CATCTATGCAGAGTACGTCA+TGG | - | chr1_2:12409515-12409534 | Msa0056770:CDS | 45.0% | |
| ! | ATCCTCGGTCTTTTGTGTGT+TGG | - | chr1_2:12409732-12409751 | Msa0056770:intron | 45.0% |
| AACCAACACACAAAAGACCG+AGG | + | chr1_2:12409737-12409756 | None:intergenic | 45.0% | |
| !! | TCGGTCTTTTGTGTGTTGGT+TGG | - | chr1_2:12409736-12409755 | Msa0056770:intron | 45.0% |
| TACACTGATGCAGATAGCTG+AGG | - | chr1_2:12409909-12409928 | Msa0056770:intron | 45.0% | |
| TGAGTTCCTTATTCGTCTCC+CGG | - | chr1_2:12409945-12409964 | Msa0056770:intron | 45.0% | |
| AATATCCCGGGAGACGAATA+AGG | + | chr1_2:12409954-12409973 | None:intergenic | 45.0% | |
| ACATACTTGGGCAATATCCC+GGG | + | chr1_2:12409966-12409985 | None:intergenic | 45.0% | |
| TACTACCTCCCAAACCACAA+TGG | - | chr1_2:12410156-12410175 | Msa0056770:intron | 45.0% | |
| ! | TAGATCCATTGTGGTTTGGG+AGG | + | chr1_2:12410164-12410183 | None:intergenic | 45.0% |
| ! | TCGCTTGTTGAAGGTAAGGA+AGG | - | chr1_2:12410226-12410245 | Msa0056770:CDS | 45.0% |
| AAGGAACTCAACGTACCAGA+TGG | - | chr1_2:12410245-12410264 | Msa0056770:intron | 45.0% | |
| ATAACGAGCTTCACACCATC+TGG | + | chr1_2:12410263-12410282 | None:intergenic | 45.0% | |
| ! | TATTCTCAACTTTGGTGGCC+AGG | - | chr1_2:12410280-12410299 | Msa0056770:intron | 45.0% |
| !! | CTCAGATTGGTGGCATGTTT+TGG | - | chr1_2:12410657-12410676 | Msa0056770:intron | 45.0% |
| GCTTATGCCAACAATTGGTC+CGG | + | chr1_2:12410871-12410890 | None:intergenic | 45.0% | |
| TATGGCATCATCCCATGAGT+TGG | - | chr1_2:12410940-12410959 | Msa0056770:intron | 45.0% | |
| TTATCTTCCATCCTGATGGC+TGG | + | chr1_2:12411216-12411235 | None:intergenic | 45.0% | |
| !! | ACAATGGTGGAAGAAGTACC+AGG | + | chr1_2:12411270-12411289 | None:intergenic | 45.0% |
| GTATGCCAAGGCTTCACTAA+CGG | + | chr1_2:12411567-12411586 | None:intergenic | 45.0% | |
| AAAGGGACACTTGTATGCCA+AGG | + | chr1_2:12411579-12411598 | None:intergenic | 45.0% | |
| GAGATTTAATCACCGGTCAC+TGG | - | chr1_2:12411793-12411812 | Msa0056770:CDS | 45.0% | |
| AAGATAAGGTCTCCAGTGAC+CGG | + | chr1_2:12411808-12411827 | None:intergenic | 45.0% | |
| AAAACGCTGATCGTAAGGCA+GGG | + | chr1_2:12412065-12412084 | None:intergenic | 45.0% | |
| TAAAACGCTGATCGTAAGGC+AGG | + | chr1_2:12412066-12412085 | None:intergenic | 45.0% | |
| ! | ATCCTTCAGGAGACAGCTTT+TGG | - | chr1_2:12412173-12412192 | Msa0056770:intron | 45.0% |
| TTCCAAAAGCTGTCTCCTGA+AGG | + | chr1_2:12412178-12412197 | None:intergenic | 45.0% | |
| ! | CTTAACGGCGTTTAGCTTAG+TGG | - | chr1_2:12412337-12412356 | Msa0056770:intron | 45.0% |
| TCAAGGTCTTCCAGATACTG+TGG | - | chr1_2:12412645-12412664 | Msa0056770:intron | 45.0% | |
| CTTACAGAGCTTATCCGAGT+TGG | - | chr1_2:12412672-12412691 | Msa0056770:intron | 45.0% | |
| CCCATTACATCTAACCTTCC+AGG | + | chr1_2:12412977-12412996 | None:intergenic | 45.0% | |
| ! | GGAAGGTTAGATGTAATGGG+CGG | - | chr1_2:12412977-12412996 | Msa0056770:CDS | 45.0% |
| ! | GGCGGTATTGCTGATTATTC+TGG | - | chr1_2:12412995-12413014 | Msa0056770:CDS | 45.0% |
| GGACAGAAAATTCAACCTGC+AGG | + | chr1_2:12413030-12413049 | None:intergenic | 45.0% | |
| ACAGTCTATGCTTACTCGGA+TGG | + | chr1_2:12413240-12413259 | None:intergenic | 45.0% | |
| ATCCGAGTAAGCATAGACTG+TGG | - | chr1_2:12413239-12413258 | Msa0056770:intron | 45.0% | |
| TTTGTCATTCTGTCTGGCCT+CGG | + | chr1_2:12413272-12413291 | None:intergenic | 45.0% | |
| CCAGACAGAATGACAAAGGA+GGG | - | chr1_2:12413275-12413294 | Msa0056770:intron | 45.0% | |
| ATTTGCAAGACAGCAGTGTG+AGG | + | chr1_2:12413301-12413320 | None:intergenic | 45.0% | |
| CACTTAATCTCGATCACGTC+AGG | - | chr1_2:12413514-12413533 | Msa0056770:intron | 45.0% | |
| CGATCACGTCAGGTATCATA+CGG | - | chr1_2:12413524-12413543 | Msa0056770:intron | 45.0% | |
| ! | GTATCATACGGCTCGGAATT+AGG | - | chr1_2:12413536-12413555 | Msa0056770:intron | 45.0% |
| TCAAGATCCAGCCCAAAAGT+CGG | - | chr1_2:12413649-12413668 | Msa0056770:intron | 45.0% | |
| TGAGGATAGTATCAGCATGC+TGG | - | chr1_2:12413817-12413836 | Msa0056770:intron | 45.0% | |
| GATGATACACCTTTCCCTTC+TGG | + | chr1_2:12413857-12413876 | None:intergenic | 45.0% | |
| ATCATCTTCTGCATCTGTCG+AGG | - | chr1_2:12413871-12413890 | Msa0056770:intron | 45.0% | |
| TCTGCTATTGCAGCTTCTCA+CGG | - | chr1_2:12413905-12413924 | Msa0056770:intron | 45.0% | |
| !! | CAGGATTGAATATCGGCTCA+AGG | - | chr1_2:12414172-12414191 | Msa0056770:intron | 45.0% |
| CAATGTGATTCTCCACCTGA+TGG | + | chr1_2:12414320-12414339 | None:intergenic | 45.0% | |
| CAGGTGGAGAATCACATTGT+AGG | - | chr1_2:12414321-12414340 | Msa0056770:intron | 45.0% | |
| ATCTGGTCCATAACACCACA+AGG | + | chr1_2:12414351-12414370 | None:intergenic | 45.0% | |
| !! | TTGTGGTGTTATGGACCAGA+TGG | - | chr1_2:12414350-12414369 | Msa0056770:intron | 45.0% |
| TATGGTTGGGAATTTCGACG+AGG | + | chr1_2:12414528-12414547 | None:intergenic | 45.0% | |
| CGAAATTCCCAACCATATCC+GGG | - | chr1_2:12414531-12414550 | Msa0056770:intron | 45.0% | |
| TTCCGGAATAAGACACAGGT+TGG | - | chr1_2:12414567-12414586 | Msa0056770:intron | 45.0% | |
| TATTTGAAAGCAGCGTGGCA+TGG | - | chr1_2:12414831-12414850 | Msa0056770:intron | 45.0% | |
| ! | AGTGTTGGAGGTGCAGATTA+TGG | - | chr1_2:12414874-12414893 | Msa0056770:CDS | 45.0% |
| ACTCATCTCAGTCAATTCCG+TGG | + | chr1_2:12414953-12414972 | None:intergenic | 45.0% | |
| ! | ACTGAGATGAGTGCTGCAAA+TGG | - | chr1_2:12414961-12414980 | Msa0056770:intron | 45.0% |
| CTTCCTGAAACCATTGATGG+TGG | - | chr1_2:12415256-12415275 | Msa0056770:intron | 45.0% | |
| TGACCACCATCAATGGTTTC+AGG | + | chr1_2:12415262-12415281 | None:intergenic | 45.0% | |
| TCCGAATAATGTACCGCCTT+CGG | + | chr1_2:12415820-12415839 | None:intergenic | 45.0% | |
| TTATTCGGAGCCAAGATCAC+TGG | - | chr1_2:12415831-12415850 | Msa0056770:intron | 45.0% | |
| GGTGGAACGGTTTGTGTAAT+CGG | - | chr1_2:12415864-12415883 | Msa0056770:intron | 45.0% | |
| TTGGCCCGAAAGAGATATGA+AGG | + | chr1_2:12415979-12415998 | None:intergenic | 45.0% | |
| GATGAGCCCTCGAAAAGAAA+CGG | + | chr1_2:12416697-12416716 | None:intergenic | 45.0% | |
| TGGGGATGTTAATGCAGTCT+TGG | - | chr1_2:12416786-12416805 | Msa0056770:intron | 45.0% | |
| !!! | AAAAATTATTTTTATTTTCT+TGG | - | chr1_2:12414749-12414768 | Msa0056770:intron | 5.0% |
| !!! | AAAAAATATTTTTTGTTTAA+AGG | - | chr1_2:12416470-12416489 | Msa0056770:intron | 5.0% |
| !!! | AAAAATATTTTTTGTTTAAA+GGG | - | chr1_2:12416471-12416490 | Msa0056770:intron | 5.0% |
| ! | GCAAGGCATTTGATCGATGC+AGG | - | chr1_2:12407816-12407835 | Msa0056770:intron | 50.0% |
| GATTAGGTGTGTCCTGGTGT+CGG | + | chr1_2:12408131-12408150 | None:intergenic | 50.0% | |
| ! | TTCTCGGATTAGGTGTGTCC+TGG | + | chr1_2:12408137-12408156 | None:intergenic | 50.0% |
| TGCACTCTGCAGCAGCATAA+TGG | + | chr1_2:12408370-12408389 | None:intergenic | 50.0% | |
| TTAAGGACGGAAACCCTCTC+TGG | + | chr1_2:12408539-12408558 | None:intergenic | 50.0% | |
| TTTGGACTGTGGAGCTGTTC+AGG | - | chr1_2:12408743-12408762 | Msa0056770:intron | 50.0% | |
| CAAAGAAGCAAGGCGATCGA+CGG | + | chr1_2:12408781-12408800 | None:intergenic | 50.0% | |
| ! | TCGCCTTGCTTCTTTGGAGA+AGG | - | chr1_2:12408785-12408804 | Msa0056770:intron | 50.0% |
| ACAGGTCTCCGATGTTGTTC+CGG | - | chr1_2:12409193-12409212 | Msa0056770:intron | 50.0% | |
| GAGTTCCTTATTCGTCTCCC+GGG | - | chr1_2:12409946-12409965 | Msa0056770:intron | 50.0% | |
| !! | TTGATGTCCCTTTGGTGGTG+AGG | - | chr1_2:12410108-12410127 | Msa0056770:intron | 50.0% |
| GACCGCAAAAACACAGCAGT+TGG | - | chr1_2:12410454-12410473 | Msa0056770:intron | 50.0% | |
| GCTGTAACACTGTCGCATAG+CGG | + | chr1_2:12410488-12410507 | None:intergenic | 50.0% | |
| TGTGAGTCCGGACCAATTGT+TGG | - | chr1_2:12410861-12410880 | Msa0056770:CDS | 50.0% | |
| CTCGTGTGAGTTATGCGCTA+TGG | - | chr1_2:12410893-12410912 | Msa0056770:intron | 50.0% | |
| GTGAGTTATGCGCTATGGAC+TGG | - | chr1_2:12410898-12410917 | Msa0056770:intron | 50.0% | |
| !! | TTATGCGCTATGGACTGGTC+CGG | - | chr1_2:12410903-12410922 | Msa0056770:intron | 50.0% |
| CCATAAGTTTGTCCGGAGTC+CGG | + | chr1_2:12410925-12410944 | None:intergenic | 50.0% | |
| AGCGTGCAAGACCAACTCAT+GGG | + | chr1_2:12410954-12410973 | None:intergenic | 50.0% | |
| AAGCGTGCAAGACCAACTCA+TGG | + | chr1_2:12410955-12410974 | None:intergenic | 50.0% | |
| TCGTCTTATCTCCAGCCATC+AGG | - | chr1_2:12411202-12411221 | Msa0056770:CDS | 50.0% | |
| CTTATCTCCAGCCATCAGGA+TGG | - | chr1_2:12411206-12411225 | Msa0056770:CDS | 50.0% | |
| GCAGCATGTGACTGTATGCT+TGG | - | chr1_2:12411446-12411465 | Msa0056770:CDS | 50.0% | |
| TGGTACCGTTAGTGAAGCCT+TGG | - | chr1_2:12411559-12411578 | Msa0056770:intron | 50.0% | |
| ! | TACAGGCATCAATGGTGGTG+AGG | - | chr1_2:12411860-12411879 | Msa0056770:intron | 50.0% |
| TATCAACTCCAAAGGGCTCC+TGG | - | chr1_2:12412394-12412413 | Msa0056770:intron | 50.0% | |
| !! | ACCAGGTTGTTGGTCTTCAG+CGG | + | chr1_2:12412452-12412471 | None:intergenic | 50.0% |
| GCATAGCCTCCAGAATTCAC+AGG | + | chr1_2:12412478-12412497 | None:intergenic | 50.0% | |
| ! | GCATACAAAGAGAGAGCGCA+AGG | - | chr1_2:12412702-12412721 | Msa0056770:intron | 50.0% |
| TTGTTACGAGAGCTCCTGGA+AGG | - | chr1_2:12412960-12412979 | Msa0056770:CDS | 50.0% | |
| !! | TTCTGGTAGTCTTGTCCTGC+AGG | - | chr1_2:12413012-12413031 | Msa0056770:CDS | 50.0% |
| TAGACTGTGGAAACATGCCG+AGG | - | chr1_2:12413252-12413271 | Msa0056770:intron | 50.0% | |
| GAGGCCAGACAGAATGACAA+AGG | - | chr1_2:12413271-12413290 | Msa0056770:intron | 50.0% | |
| GCCAGACAGAATGACAAAGG+AGG | - | chr1_2:12413274-12413293 | Msa0056770:intron | 50.0% | |
| CCCTCCTTTGTCATTCTGTC+TGG | + | chr1_2:12413278-12413297 | None:intergenic | 50.0% | |
| ACGTCAGGTATCATACGGCT+CGG | - | chr1_2:12413529-12413548 | Msa0056770:intron | 50.0% | |
| ! | TCGTGCCCCAACTTTTGACA+TGG | - | chr1_2:12413562-12413581 | Msa0056770:intron | 50.0% |
| !!! | AGTGTTACCGACTTTTGGGC+TGG | + | chr1_2:12413659-12413678 | None:intergenic | 50.0% |
| ! | GACTATGGGCTAACTGTCAC+AGG | - | chr1_2:12413735-12413754 | Msa0056770:intron | 50.0% |
| ! | TATGGGCTAACTGTCACAGG+TGG | - | chr1_2:12413738-12413757 | Msa0056770:intron | 50.0% |
| ! | ATGGGCTAACTGTCACAGGT+GGG | - | chr1_2:12413739-12413758 | Msa0056770:intron | 50.0% |
| CAGCATGCTGGTATCATCTG+CGG | - | chr1_2:12413829-12413848 | Msa0056770:intron | 50.0% | |
| TATCATCTGCGGTCCCAGAA+GGG | - | chr1_2:12413840-12413859 | Msa0056770:intron | 50.0% | |
| !! | GAATATCGGCTCAAGGGATC+TGG | - | chr1_2:12414179-12414198 | Msa0056770:intron | 50.0% |
| !! | TCTGGCTTTGCTATGCCAGA+AGG | - | chr1_2:12414197-12414216 | Msa0056770:intron | 50.0% |
| CACATTGTAGGAGCTCCTTG+TGG | - | chr1_2:12414333-12414352 | Msa0056770:intron | 50.0% | |
| ! | AGGAGCTCCTTGTGGTGTTA+TGG | - | chr1_2:12414341-12414360 | Msa0056770:intron | 50.0% |
| ATGCAGCCTGCAGAGATTGT+TGG | - | chr1_2:12414502-12414521 | Msa0056770:intron | 50.0% | |
| TTCCCAACCATATCCGGGTT+TGG | - | chr1_2:12414536-12414555 | Msa0056770:intron | 50.0% | |
| TCCCAACCATATCCGGGTTT+GGG | - | chr1_2:12414537-12414556 | Msa0056770:intron | 50.0% | |
| CAATTCCCCAAACCCGGATA+TGG | + | chr1_2:12414546-12414565 | None:intergenic | 50.0% | |
| CGGAATCAATTCCCCAAACC+CGG | + | chr1_2:12414552-12414571 | None:intergenic | 50.0% | |
| ! | CGGGTTTGGGGAATTGATTC+CGG | - | chr1_2:12414550-12414569 | Msa0056770:intron | 50.0% |
| ! | CACAAGCACTGTAGCTGTAG+TGG | + | chr1_2:12415725-12415744 | None:intergenic | 50.0% |
| CACTACAGCTACAGTGCTTG+TGG | - | chr1_2:12415723-12415742 | Msa0056770:intron | 50.0% | |
| AGCTACAGTGCTTGTGGACT+TGG | - | chr1_2:12415729-12415748 | Msa0056770:intron | 50.0% | |
| !! | CTTGTGGACTTGGCTCTGAT+GGG | - | chr1_2:12415739-12415758 | Msa0056770:intron | 50.0% |
| !! | TTGGCTCTGATGGGACAGAT+AGG | - | chr1_2:12415748-12415767 | Msa0056770:intron | 50.0% |
| ! | AGTGCAGCATCTAAAGCCGA+AGG | - | chr1_2:12415801-12415820 | Msa0056770:intron | 50.0% |
| GCCGAAGGCGGTACATTATT+CGG | - | chr1_2:12415816-12415835 | Msa0056770:intron | 50.0% | |
| TTGGCCACCTGAAAATTCGC+CGG | - | chr1_2:12416734-12416753 | Msa0056770:intron | 50.0% | |
| !!! | TTTTTTTGGGGGTAGCACGC+CGG | + | chr1_2:12416756-12416775 | None:intergenic | 50.0% |
| !! | TCTGAGGCACTGGTTAAGGA+AGG | + | chr1_2:12417246-12417265 | None:intergenic | 50.0% |
| TTCCTTAACCAGTGCCTCAG+AGG | - | chr1_2:12417245-12417264 | Msa0056770:five_prime_UTR | 50.0% | |
| ACATGCCACTCGTGTCACAG+AGG | - | chr1_2:12407594-12407613 | Msa0056770:exon | 55.0% | |
| GTCTGTGTCAGTGTCGTGTC+CGG | + | chr1_2:12408037-12408056 | None:intergenic | 55.0% | |
| ACATAAGCGTGTCCGACACC+AGG | - | chr1_2:12408116-12408135 | Msa0056770:intron | 55.0% | |
| TGCTGCAGAGTGCAACAGCT+TGG | - | chr1_2:12408376-12408395 | Msa0056770:intron | 55.0% | |
| CGTCGATCGCCTTGCTTCTT+TGG | - | chr1_2:12408779-12408798 | Msa0056770:intron | 55.0% | |
| TGTTCCGGTTGCATGTCGTG+CGG | - | chr1_2:12409208-12409227 | Msa0056770:intron | 55.0% | |
| !! | ATGTCCCTTTGGTGGTGAGG+AGG | - | chr1_2:12410111-12410130 | Msa0056770:intron | 55.0% |
| GTAGCCTCCTCACCACCAAA+GGG | + | chr1_2:12410118-12410137 | None:intergenic | 55.0% | |
| TGTAGCCTCCTCACCACCAA+AGG | + | chr1_2:12410119-12410138 | None:intergenic | 55.0% | |
| AGGGGATCTAGGCAATCACC+TGG | + | chr1_2:12410301-12410320 | None:intergenic | 55.0% | |
| !! | ACTGTACCTGTGGACTGGTC+CGG | - | chr1_2:12410833-12410852 | Msa0056770:CDS | 55.0% |
| CCGGACTCCGGACAAACTTA+TGG | - | chr1_2:12410922-12410941 | Msa0056770:intron | 55.0% | |
| AGTACCAGGCACAACCAACC+AGG | + | chr1_2:12411256-12411275 | None:intergenic | 55.0% | |
| TTGTGGTGCTTCCGACAACG+CGG | - | chr1_2:12411367-12411386 | Msa0056770:intron | 55.0% | |
| GTCGGGCGTATATGCGTCTT+TGG | + | chr1_2:12411420-12411439 | None:intergenic | 55.0% | |
| GCTGATCGTAAGGCAGGGAA+AGG | + | chr1_2:12412060-12412079 | None:intergenic | 55.0% | |
| GGGATAGCAATATCTCGGCC+AGG | + | chr1_2:12412415-12412434 | None:intergenic | 55.0% | |
| TCCGCTGAAGACCAACAACC+TGG | - | chr1_2:12412448-12412467 | Msa0056770:intron | 55.0% | |
| TCACAGGCGAACCAGGTTGT+TGG | + | chr1_2:12412462-12412481 | None:intergenic | 55.0% | |
| CCAGAATTCACAGGCGAACC+AGG | + | chr1_2:12412469-12412488 | None:intergenic | 55.0% | |
| ! | CCTGGTTCGCCTGTGAATTC+TGG | - | chr1_2:12412466-12412485 | Msa0056770:intron | 55.0% |
| GGTTCGCCTGTGAATTCTGG+AGG | - | chr1_2:12412469-12412488 | Msa0056770:intron | 55.0% | |
| AGGTGGGCAGCATATGTTGC+TGG | - | chr1_2:12413755-12413774 | Msa0056770:intron | 55.0% | |
| GTATCATCTGCGGTCCCAGA+AGG | - | chr1_2:12413839-12413858 | Msa0056770:intron | 55.0% | |
| GACCAGATGGCTTCAGCATG+CGG | - | chr1_2:12414363-12414382 | Msa0056770:intron | 55.0% | |
| ACGAGGCCAACAATCTCTGC+AGG | + | chr1_2:12414511-12414530 | None:intergenic | 55.0% | |
| CCCCAAACCCGGATATGGTT+GGG | + | chr1_2:12414541-12414560 | None:intergenic | 55.0% | |
| CCCAACCATATCCGGGTTTG+GGG | - | chr1_2:12414538-12414557 | Msa0056770:intron | 55.0% | |
| TCCCCAAACCCGGATATGGT+TGG | + | chr1_2:12414542-12414561 | None:intergenic | 55.0% | |
| !! | GCTTGTGGACTTGGCTCTGA+TGG | - | chr1_2:12415738-12415757 | Msa0056770:intron | 55.0% |
| ! | GCAGCATCTAAAGCCGAAGG+CGG | - | chr1_2:12415804-12415823 | Msa0056770:intron | 55.0% |
| TTCGGAGCCAAGATCACTGG+TGG | - | chr1_2:12415834-12415853 | Msa0056770:intron | 55.0% | |
| TGAACCGCCACCAGTGATCT+TGG | + | chr1_2:12415844-12415863 | None:intergenic | 55.0% | |
| !! | AAGATCACTGGTGGCGGTTC+AGG | - | chr1_2:12415843-12415862 | Msa0056770:intron | 55.0% |
| !! | CTTTTCGAGGGCTCATCACC+CGG | - | chr1_2:12416700-12416719 | Msa0056770:intron | 55.0% |
| ! | TAGCACGCCGGCGAATTTTC+AGG | + | chr1_2:12416744-12416763 | None:intergenic | 55.0% |
| !! | TGCCTCTGAGGCACTGGTTA+AGG | + | chr1_2:12417250-12417269 | None:intergenic | 55.0% |
| !! | CTAGTTTGCCTCTGAGGCAC+TGG | + | chr1_2:12417256-12417275 | None:intergenic | 55.0% |
| GCAGAGTACGTCATGGCTGC+TGG | - | chr1_2:12409522-12409541 | Msa0056770:CDS | 60.0% | |
| ATGAGTCCGGACCAGTCCAC+AGG | + | chr1_2:12410842-12410861 | None:intergenic | 60.0% | |
| GGTCCGGACTCATGTGAGTC+CGG | - | chr1_2:12410849-12410868 | Msa0056770:CDS | 60.0% | |
| GGTCCGGACTCACATGAGTC+CGG | + | chr1_2:12410855-12410874 | None:intergenic | 60.0% | |
| !! | CTATGGACTGGTCCGGACTC+CGG | - | chr1_2:12410910-12410929 | Msa0056770:intron | 60.0% |
| ! | ACCTCCTGGTTGGTTGTGCC+TGG | - | chr1_2:12411249-12411268 | Msa0056770:intron | 60.0% |
| ACCAGGCACAACCAACCAGG+AGG | + | chr1_2:12411253-12411272 | None:intergenic | 60.0% | |
| GGTGGCAGCTCACATCCTTC+AGG | - | chr1_2:12412160-12412179 | Msa0056770:intron | 60.0% | |
| TATCTCGGCCAGGAGCCCTT+TGG | + | chr1_2:12412405-12412424 | None:intergenic | 60.0% | |
| TCTGCGGTCCCAGAAGGGAA+AGG | - | chr1_2:12413845-12413864 | Msa0056770:intron | 60.0% | |
| CACCGCATGCTGAAGCCATC+TGG | + | chr1_2:12414368-12414387 | None:intergenic | 60.0% | |
| GGAGCCAAGATCACTGGTGG+CGG | - | chr1_2:12415837-12415856 | Msa0056770:intron | 60.0% | |
| !! | ATCACTGGTGGCGGTTCAGG+TGG | - | chr1_2:12415846-12415865 | Msa0056770:intron | 60.0% |
| !! | TGGTGGCGGTTCAGGTGGAA+CGG | - | chr1_2:12415851-12415870 | Msa0056770:intron | 60.0% |
| TCACCCGGTGCAGGGAAGTT+TGG | - | chr1_2:12416715-12416734 | Msa0056770:intron | 60.0% | |
| TGGCCAAACTTCCCTGCACC+GGG | + | chr1_2:12416721-12416740 | None:intergenic | 60.0% | |
| GTGGCCAAACTTCCCTGCAC+CGG | + | chr1_2:12416722-12416741 | None:intergenic | 60.0% | |
| !! | CACGCCGGCGAATTTTCAGG+TGG | + | chr1_2:12416741-12416760 | None:intergenic | 60.0% |
| GCTGCCGCACGACATGCAAC+CGG | + | chr1_2:12409215-12409234 | None:intergenic | 65.0% | |
| TGTCGTGCGGCAGCAGATGC+TGG | - | chr1_2:12409221-12409240 | Msa0056770:intron | 65.0% | |
| TGGCGGAAGGTCCGCGTTGT+CGG | + | chr1_2:12411381-12411400 | None:intergenic | 65.0% | |
| AGGGCTCATCACCCGGTGCA+GGG | - | chr1_2:12416707-12416726 | Msa0056770:intron | 65.0% | |
| GAGGGCTCATCACCCGGTGC+AGG | - | chr1_2:12416706-12416725 | Msa0056770:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 12407144 | 12417277 | 12407144 | ID=Msa0056770;Name=Msa0056770 |
| chr1_2 | mRNA | 12407144 | 12417277 | 12407144 | ID=Msa0056770-mRNA-1;Parent=Msa0056770;Name=Msa0056770-mRNA-1;_AED=0.14;_eAED=0.14;_QI=364|1|1|1|1|1|28|452|992 |
| chr1_2 | exon | 12407144 | 12407763 | 12407144 | ID=Msa0056770-mRNA-1:exon:4883;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12408498 | 12408701 | 12408498 | ID=Msa0056770-mRNA-1:exon:4882;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12408848 | 12408919 | 12408848 | ID=Msa0056770-mRNA-1:exon:4881;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12409025 | 12409190 | 12409025 | ID=Msa0056770-mRNA-1:exon:4880;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12409348 | 12409545 | 12409348 | ID=Msa0056770-mRNA-1:exon:4879;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12409837 | 12409913 | 12409837 | ID=Msa0056770-mRNA-1:exon:4878;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12410002 | 12410097 | 12410002 | ID=Msa0056770-mRNA-1:exon:4877;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12410203 | 12410246 | 12410203 | ID=Msa0056770-mRNA-1:exon:4876;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12410495 | 12410664 | 12410495 | ID=Msa0056770-mRNA-1:exon:4875;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12410755 | 12410885 | 12410755 | ID=Msa0056770-mRNA-1:exon:4874;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12411100 | 12411225 | 12411100 | ID=Msa0056770-mRNA-1:exon:4873;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12411388 | 12411471 | 12411388 | ID=Msa0056770-mRNA-1:exon:4872;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12411671 | 12411812 | 12411671 | ID=Msa0056770-mRNA-1:exon:4871;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12411915 | 12412069 | 12411915 | ID=Msa0056770-mRNA-1:exon:4870;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12412204 | 12412260 | 12412204 | ID=Msa0056770-mRNA-1:exon:4869;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12412540 | 12412659 | 12412540 | ID=Msa0056770-mRNA-1:exon:4868;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12412766 | 12412875 | 12412766 | ID=Msa0056770-mRNA-1:exon:4867;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12412954 | 12413056 | 12412954 | ID=Msa0056770-mRNA-1:exon:4866;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12413151 | 12413204 | 12413151 | ID=Msa0056770-mRNA-1:exon:4865;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12414120 | 12414182 | 12414120 | ID=Msa0056770-mRNA-1:exon:4864;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12414267 | 12414334 | 12414267 | ID=Msa0056770-mRNA-1:exon:4863;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12414442 | 12414499 | 12414442 | ID=Msa0056770-mRNA-1:exon:4862;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12414849 | 12414915 | 12414849 | ID=Msa0056770-mRNA-1:exon:4861;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12415148 | 12415224 | 12415148 | ID=Msa0056770-mRNA-1:exon:4860;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12415415 | 12415498 | 12415415 | ID=Msa0056770-mRNA-1:exon:4859;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12415615 | 12415683 | 12415615 | ID=Msa0056770-mRNA-1:exon:4858;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12416501 | 12416608 | 12416501 | ID=Msa0056770-mRNA-1:exon:4857;Parent=Msa0056770-mRNA-1 |
| chr1_2 | exon | 12416806 | 12417277 | 12416806 | ID=Msa0056770-mRNA-1:exon:4856;Parent=Msa0056770-mRNA-1 |
| chr1_2 | five_prime_UTR | 12416914 | 12417277 | 12416914 | ID=Msa0056770-mRNA-1:five_prime_utr;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12416806 | 12416913 | 12416806 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12416501 | 12416608 | 12416501 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12415615 | 12415683 | 12415615 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12415415 | 12415498 | 12415415 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12415148 | 12415224 | 12415148 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12414849 | 12414915 | 12414849 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12414442 | 12414499 | 12414442 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12414267 | 12414334 | 12414267 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12414120 | 12414182 | 12414120 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12413151 | 12413204 | 12413151 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12412954 | 12413056 | 12412954 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12412766 | 12412875 | 12412766 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12412540 | 12412659 | 12412540 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12412204 | 12412260 | 12412204 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12411915 | 12412069 | 12411915 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12411671 | 12411812 | 12411671 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12411388 | 12411471 | 12411388 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12411100 | 12411225 | 12411100 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12410755 | 12410885 | 12410755 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12410495 | 12410664 | 12410495 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12410203 | 12410246 | 12410203 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12410002 | 12410097 | 12410002 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12409837 | 12409913 | 12409837 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12409348 | 12409545 | 12409348 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12409025 | 12409190 | 12409025 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12408848 | 12408919 | 12408848 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12408498 | 12408701 | 12408498 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | CDS | 12407596 | 12407763 | 12407596 | ID=Msa0056770-mRNA-1:cds;Parent=Msa0056770-mRNA-1 |
| chr1_2 | three_prime_UTR | 12407144 | 12407595 | 12407144 | ID=Msa0056770-mRNA-1:three_prime_utr;Parent=Msa0056770-mRNA-1 |
| Gene Sequence |
| Protein sequence |