AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0073710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0073710 MtrunA17_Chr1g0181151 87.692 65 8 0 2 66 404 468 3.04e-32 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0073710 AT3G57050.5 76.923 65 15 0 2 66 322 386 2.75e-28 103
Msa0073710 AT3G57050.4 76.923 65 15 0 2 66 344 408 3.04e-28 103
Msa0073710 AT3G57050.2 76.923 65 15 0 2 66 385 449 4.23e-28 103
Msa0073710 AT3G57050.1 76.923 65 15 0 2 66 400 464 4.41e-28 104

Find 411 sgRNAs with CRISPR-Local

Find 535 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 1_2:-47568168 Msa0073710:five_prime_UTR
TCATGCCTATTCTTCAAAAT+TGG 0.171597 1_2:+47566506 None:intergenic
AGAAGTTCTAGGTTCAATTT+TGG 0.175711 1_2:-47566609 Msa0073710:five_prime_UTR
TGATAGAGTTCTTTATAAAT+TGG 0.206729 1_2:-47567905 Msa0073710:five_prime_UTR
GGCACTGGGAGTGGCTGGTT+TGG 0.210974 1_2:-47565985 Msa0073710:five_prime_UTR
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 1_2:-47566116 Msa0073710:five_prime_UTR
AAGTCGATTGTCAATGTTAT+TGG 0.215549 1_2:-47566578 Msa0073710:five_prime_UTR
GGATGAAACACCTGCTACTA+TGG 0.221807 1_2:-47568577 Msa0073710:five_prime_UTR
ATGCAATGACACCGGGGATA+TGG 0.228093 1_2:-47568800 Msa0073710:five_prime_UTR
AAACTTGGATATGAATTAAT+AGG 0.229549 1_2:+47563603 None:intergenic
CATGGTTATGGTTATGGTTC+TGG 0.247461 1_2:+47569454 None:intergenic
TCACGAAACACTTCATATAT+AGG 0.265209 1_2:-47569498 Msa0073710:five_prime_UTR
AGTATAATAGCTGGCATATA+AGG 0.269378 1_2:+47567297 None:intergenic
GCACTGGGAGTGGCTGGTTT+GGG 0.272651 1_2:-47565984 Msa0073710:five_prime_UTR
TAAAGCAAGGTAGGCTGATT+AGG 0.274729 1_2:+47564187 None:intergenic
CACGAAACACTTCATATATA+GGG 0.275581 1_2:-47569497 Msa0073710:five_prime_UTR
TCATAAGGCTCAAAGACTTT+TGG 0.281124 1_2:-47563727 Msa0073710:three_prime_UTR
ACTGATAAGGCTCGTGAATT+TGG 0.282330 1_2:-47568015 Msa0073710:five_prime_UTR
CGCTCTCATGGACAGGGATT+TGG 0.283876 1_2:-47566045 Msa0073710:five_prime_UTR
TGCTTTATTGCCCTTCTTGA+AGG 0.285663 1_2:-47567647 Msa0073710:five_prime_UTR
ACAAGAAGGGTATAAGGTTT+TGG 0.290686 1_2:-47568349 Msa0073710:five_prime_UTR
TCTTTATAAATTGGATGAAT+TGG 0.295496 1_2:-47567896 Msa0073710:five_prime_UTR
AAAGATGACTCCACCTATTA+AGG 0.296881 1_2:-47566549 Msa0073710:five_prime_UTR
GTTTCCACAAGAAGGGTATA+AGG 0.306484 1_2:-47568355 Msa0073710:five_prime_UTR
GATGCTAATGTGATGCTTAA+TGG 0.306849 1_2:-47566854 Msa0073710:five_prime_UTR
GCTGAAGCTGCTGCTCCTTA+TGG 0.308195 1_2:-47567436 Msa0073710:five_prime_UTR
AAAATTGAACCTAGAACTTC+TGG 0.312356 1_2:+47566611 None:intergenic
CTTTGAGTATATTGGTGAAA+TGG 0.316138 1_2:-47566108 Msa0073710:five_prime_UTR
AAAATAAATGTTCTGAGCTT+TGG 0.316731 1_2:+47563810 None:intergenic
AAACCACCAGGAGCTTCTTT+AGG 0.324095 1_2:+47568204 None:intergenic
CTCCTGGGAGGAGGAATAGA+TGG 0.327493 1_2:-47568740 Msa0073710:five_prime_UTR
TCCTGTTGGTGGTGTTGAAT+TGG 0.331040 1_2:-47568499 Msa0073710:five_prime_UTR
AGCAGAAGAGGAGGAATAGA+TGG 0.331460 1_2:-47568896 Msa0073710:five_prime_UTR
GGACCAAGAGAGGCATCTTT+TGG 0.333443 1_2:-47567938 Msa0073710:five_prime_UTR
TAACGCCTGGTGGTGCTACT+TGG 0.335012 1_2:-47568662 Msa0073710:five_prime_UTR
AAGATGAGAGTGAACCTTAC+AGG 0.336123 1_2:-47567000 Msa0073710:five_prime_UTR
CATCTTGATCTTTGTCTCTT+CGG 0.340768 1_2:+47568600 None:intergenic
CTTGCTACACCTACGCCGTT+GGG 0.343482 1_2:-47568279 Msa0073710:five_prime_UTR
CAGCTTCTTATGTGCCGATT+AGG 0.343784 1_2:-47568320 Msa0073710:five_prime_UTR
ATATATAACTCTCTGTATAT+TGG 0.346022 1_2:-47565768 Msa0073710:five_prime_UTR
GGGAGAGAGAGGAAACAATT+AGG 0.348222 1_2:-47569004 Msa0073710:five_prime_UTR
AGCCATTGTGGAAGGGTATT+AGG 0.349292 1_2:-47567387 Msa0073710:five_prime_UTR
GGAAGCCATGGTTATGGTTA+TGG 0.351111 1_2:+47569448 None:intergenic
CCAAAATACTGATAATCTTC+AGG 0.353123 1_2:+47568168 None:intergenic
AAGTCATGCTTATTCTGATT+CGG 0.359133 1_2:-47567270 Msa0073710:five_prime_UTR
ACCAGAGATGCTCCACAATT+AGG 0.363626 1_2:+47563929 None:intergenic
CTGGGAAGCAAATCCTTAAT+AGG 0.363997 1_2:+47566536 None:intergenic
TCCTAATTGTGGAGCATCTC+TGG 0.365033 1_2:-47563930 Msa0073710:three_prime_UTR
TCCACCCTGCCCGGAAAGTT+AGG 0.365154 1_2:-47565806 Msa0073710:five_prime_UTR
AGTACACCTCCCTAACTTTC+CGG 0.366416 1_2:+47565796 None:intergenic
GGAGGAAGGTGGTGTGAAAA+AGG 0.368505 1_2:-47568856 Msa0073710:five_prime_UTR
TCCAAAGATAGCTGAGATAA+AGG 0.372255 1_2:+47563401 None:intergenic
GATTTCAATCATCTATGTAT+TGG 0.375335 1_2:-47565655 Msa0073710:intron
AGTCATGCTTATTCTGATTC+GGG 0.375914 1_2:-47567269 Msa0073710:five_prime_UTR
ATGGTTATGGTTCTGGTTCA+AGG 0.376679 1_2:+47569461 None:intergenic
GTATCTCATGATTTGAAACT+TGG 0.376980 1_2:+47563588 None:intergenic
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 1_2:-47567119 Msa0073710:five_prime_UTR
GAAGAGTACCCAGAAGTTCT+AGG 0.380939 1_2:-47566620 Msa0073710:five_prime_UTR
TGGGTTTATTATTCCGTTGA+TGG 0.385433 1_2:-47567323 Msa0073710:five_prime_UTR
AATCATGAGATACATTGCTT+TGG 0.387375 1_2:-47563578 Msa0073710:three_prime_UTR
CCACAAATCTGAGGAAGATA+TGG 0.387473 1_2:+47566791 None:intergenic
TTTGAGTATATTGGTGAAAT+GGG 0.389391 1_2:-47566107 Msa0073710:five_prime_UTR
TGCTGACCACGATTCTCTTC+AGG 0.390854 1_2:+47568237 None:intergenic
GGTGTCATTGCATTCGAATC+AGG 0.391236 1_2:+47568810 None:intergenic
AAACGCCGGATCCGTCTGTT+AGG 0.391365 1_2:-47569064 Msa0073710:five_prime_UTR
TTCTGTATCAAATGCCGTTT+AGG 0.391714 1_2:-47563776 Msa0073710:three_prime_UTR
ATCATGAGATACATTGCTTT+GGG 0.392329 1_2:-47563577 Msa0073710:three_prime_UTR
TTCCTCTCTTTCTGCTCATC+CGG 0.400046 1_2:+47568108 None:intergenic
GTAGCAAGAAGCTTCCTTGC+AGG 0.400126 1_2:+47568294 None:intergenic
CTAGACAATGCACTTAGAAC+TGG 0.400887 1_2:-47564057 Msa0073710:CDS
AGCAGCAGCTTCAGCAAGTG+CGG 0.405247 1_2:+47567444 None:intergenic
CCAGAACTTAATGTGCAAAA+TGG 0.405341 1_2:-47566155 Msa0073710:five_prime_UTR
ATCATCGGAAGCCATGGTTA+TGG 0.405783 1_2:+47569442 None:intergenic
GTACACCTCCCTAACTTTCC+GGG 0.406012 1_2:+47565797 None:intergenic
AGTAGTCTTCATCAATCAAA+AGG 0.407120 1_2:+47567833 None:intergenic
GACTACTATGCCCGTGTTGA+AGG 0.409440 1_2:-47567817 Msa0073710:five_prime_UTR
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 1_2:-47566390 Msa0073710:five_prime_UTR
GCGTCTTTAGAATTGTTAAT+CGG 0.410812 1_2:+47569206 None:intergenic
CTCTCTGTATATTGGAGCTC+AGG 0.412940 1_2:-47565760 Msa0073710:five_prime_UTR
TGCAATGACACCGGGGATAT+GGG 0.414919 1_2:-47568799 Msa0073710:five_prime_UTR
GTTGCTTATGCAGCCTACTT+TGG 0.415175 1_2:-47567962 Msa0073710:five_prime_UTR
GCATAAGCAACGGCAGTATT+CGG 0.416589 1_2:+47567974 None:intergenic
TTCCTTGCAGGTGTCCTAAT+CGG 0.417079 1_2:+47568306 None:intergenic
TCCATGACCATTCGCCTGTA+AGG 0.417256 1_2:+47566986 None:intergenic
AGAATTATTGATGCTACTCC+TGG 0.417556 1_2:-47568756 Msa0073710:five_prime_UTR
TGAGAAGGTGGTCACTAACT+TGG 0.419649 1_2:-47566957 Msa0073710:five_prime_UTR
CCATATCTTCCTCAGATTTG+TGG 0.421065 1_2:-47566791 Msa0073710:five_prime_UTR
TCCCAGTGCCATGTGCTTCA+CGG 0.421966 1_2:+47565998 None:intergenic
TGCCGTGAAGCACATGGCAC+TGG 0.425652 1_2:-47566000 Msa0073710:five_prime_UTR
ATGCTAATGTGATGCTTAAT+GGG 0.428045 1_2:-47566853 Msa0073710:five_prime_UTR
GGAGACGTTTCAAATATGTT+TGG 0.430600 1_2:+47565921 None:intergenic
GGATATATTGCGAAAGCCAT+TGG 0.432058 1_2:-47566326 Msa0073710:five_prime_UTR
TGGACAGGGATTTGGTTCAT+AGG 0.432432 1_2:-47566037 Msa0073710:five_prime_UTR
GGAAGAGGAAGAAGCTGGTA+AGG 0.433964 1_2:-47568961 Msa0073710:five_prime_UTR
GTTAATTTCGAAGAAGAAGA+AGG 0.436877 1_2:-47568982 Msa0073710:five_prime_UTR
ATAACATTGATGAATATGTT+AGG 0.437807 1_2:-47567720 Msa0073710:five_prime_UTR
GGCTGGCTCATAACTTCATA+AGG 0.437935 1_2:-47563742 Msa0073710:three_prime_UTR
CATCATCACTAGTCTGCTCT+TGG 0.441191 1_2:+47566873 None:intergenic
GTTTCTTCTTCTTCAGTAGC+AGG 0.441462 1_2:+47569296 None:intergenic
ACCTTCGACACAGATCTCTA+TGG 0.441624 1_2:-47569353 Msa0073710:five_prime_UTR
AGAGCTACTGTGAACACTTT+CGG 0.442013 1_2:-47566347 Msa0073710:five_prime_UTR
AGTATCGACCTTTGAGCAAT+GGG 0.442491 1_2:-47564015 Msa0073710:three_prime_UTR
CTTCAAAATTGGAGTCAACC+TGG 0.446024 1_2:+47566517 None:intergenic
TCCATTTGCTGAACTATGTC+TGG 0.446236 1_2:-47565944 Msa0073710:five_prime_UTR
CTGGTCTCGCGGACTGCAGC+AGG 0.446374 1_2:+47564147 None:intergenic
CAATAGGTACTGCTTGATCA+TGG 0.446506 1_2:+47563675 None:intergenic
AAAGCAAGGTAGGCTGATTA+GGG 0.447262 1_2:+47564188 None:intergenic
GAGAGATGAAGCGTTGAAGA+GGG 0.447466 1_2:-47569024 Msa0073710:five_prime_UTR
TGAGAGATGAAGCGTTGAAG+AGG 0.451101 1_2:-47569025 Msa0073710:five_prime_UTR
TTGAGGACGCTCTCATGGAC+AGG 0.452082 1_2:-47566052 Msa0073710:five_prime_UTR
TCTTCAGTAGCAGGAATTGA+AGG 0.452091 1_2:+47569305 None:intergenic
CTTGGCAAGCTCGGCACACC+GGG 0.452247 1_2:-47567603 Msa0073710:five_prime_UTR
GCAGGTGTAGCACCAGGTAA+TGG 0.453544 1_2:+47568543 None:intergenic
CACATGGCACTGGGAGTGGC+TGG 0.454748 1_2:-47565990 Msa0073710:five_prime_UTR
TGAAGGGATGAGGGTAGCCT+TGG 0.458685 1_2:-47565868 Msa0073710:five_prime_UTR
CGTCTTCTCGATTTCATCAT+CGG 0.458922 1_2:+47569427 None:intergenic
AATCAGACAGGACCTTCAAT+AGG 0.459540 1_2:+47563659 None:intergenic
AAGAAGGAAGAGGAAGAAGC+TGG 0.460954 1_2:-47568966 Msa0073710:five_prime_UTR
GGCGCAGTTGTAAACTCGCT+CGG 0.461377 1_2:-47566827 Msa0073710:five_prime_UTR
TTTGAGGCAGTTAACTGATA+AGG 0.461605 1_2:-47568028 Msa0073710:five_prime_UTR
GCCAATTCAACACCACCAAC+AGG 0.464397 1_2:+47568498 None:intergenic
GTGCCATGAGGAACAATTGA+TGG 0.465345 1_2:-47566678 Msa0073710:five_prime_UTR
TTTGCTTGAGGACGCTCTCA+TGG 0.466132 1_2:-47566057 Msa0073710:five_prime_UTR
ACAAGAATCTTATGCACATA+AGG 0.466521 1_2:+47567868 None:intergenic
ATGGGATCAGAATCAGAATC+AGG 0.467762 1_2:-47568877 Msa0073710:five_prime_UTR
CCTACTCCTGGTGCTTTGCA+AGG 0.467895 1_2:-47568471 Msa0073710:five_prime_UTR
ACAGATCCTCATCCATTCTC+TGG 0.468210 1_2:+47566415 None:intergenic
GATCTTTGTCTCTTCGGAGT+CGG 0.470813 1_2:+47568606 None:intergenic
AGTGTCGTTGCATCTGCTCT+CGG 0.474620 1_2:-47567676 Msa0073710:five_prime_UTR
GGGCAGGGTGGAACAGTCCT+TGG 0.475048 1_2:+47565817 None:intergenic
TCATCAATGTTATCTATGTC+AGG 0.476225 1_2:+47567730 None:intergenic
ACCTCCCTAACTTTCCGGGC+AGG 0.476349 1_2:+47565801 None:intergenic
TCTTGCTACACCTACGCCGT+TGG 0.476894 1_2:-47568280 Msa0073710:five_prime_UTR
GCCAGACATAGTTCAGCAAA+TGG 0.476897 1_2:+47565943 None:intergenic
AAAGGCTAAGACTTCTGATT+GGG 0.476928 1_2:-47568838 Msa0073710:five_prime_UTR
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 1_2:-47567781 Msa0073710:five_prime_UTR
AAAAGGCTAAGACTTCTGAT+TGG 0.479035 1_2:-47568839 Msa0073710:five_prime_UTR
GCCAGCATTGACTACCTAAA+CGG 0.479813 1_2:+47563762 None:intergenic
GTAGTCTTCATCAATCAAAA+GGG 0.482357 1_2:+47567834 None:intergenic
GTTGAATGAAGAGAATGAAG+AGG 0.482375 1_2:-47568139 Msa0073710:five_prime_UTR
ATCTGTTGGTATTGAGGATG+TGG 0.483898 1_2:-47564097 Msa0073710:CDS
GCTTATGCAGCCTACTTTGG+AGG 0.483942 1_2:-47567959 Msa0073710:five_prime_UTR
CTATTAAGGATTTGCTTCCC+AGG 0.486209 1_2:-47566535 Msa0073710:five_prime_UTR
TCTGTCAGAGTAAGAAATCT+TGG 0.487061 1_2:-47567621 Msa0073710:five_prime_UTR
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 1_2:-47568428 Msa0073710:five_prime_UTR
GCAAGAAGAACGCAAGAAGA+TGG 0.487733 1_2:-47569405 Msa0073710:five_prime_UTR
CAAGGTCAATACAGTTCTCC+TGG 0.488577 1_2:+47566477 None:intergenic
GTCGGTGTTGCTGATATTGT+TGG 0.492268 1_2:-47567043 Msa0073710:five_prime_UTR
TGGAAGTCATTGAAGGGATG+AGG 0.493097 1_2:-47565878 Msa0073710:five_prime_UTR
AGCGTTGAAGAGGGAGAGAG+AGG 0.494960 1_2:-47569015 Msa0073710:five_prime_UTR
AAGATCTTCTGTTAAACCTC+TGG 0.495227 1_2:+47564128 None:intergenic
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 1_2:+47567649 None:intergenic
CTCAACAAATTATACTGCTC+CGG 0.495418 1_2:+47568438 None:intergenic
TTGTGCTCATCCTCTAGTGA+TGG 0.495697 1_2:+47565717 None:intergenic
GAAGCACATGGCACTGGGAG+TGG 0.497504 1_2:-47565994 Msa0073710:five_prime_UTR
GGAAAGTTAGGGAGGTGTAC+TGG 0.497515 1_2:-47565794 Msa0073710:five_prime_UTR
GATTATTCAATAGAGTTGCC+AGG 0.499509 1_2:+47566291 None:intergenic
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 1_2:-47567125 Msa0073710:five_prime_UTR
GATGCTACTCCTAAGCTTAG+TGG 0.500348 1_2:-47568639 Msa0073710:five_prime_UTR
GATCTTGTTCGTATATCTGT+TGG 0.501570 1_2:-47564111 Msa0073710:CDS
GGGATATTGAAGAGAGGAAT+CGG 0.502496 1_2:-47568407 Msa0073710:five_prime_UTR
GTTATCTATGTCAGGCCTCA+TGG 0.502813 1_2:+47567738 None:intergenic
CAGGACATCCTGTGGTCCAA+TGG 0.503057 1_2:+47566310 None:intergenic
CCACCCTGCCCGGAAAGTTA+GGG 0.503764 1_2:-47565805 Msa0073710:five_prime_UTR
TACCATGAGTGGTGGTTCTG+TGG 0.504027 1_2:-47563508 Msa0073710:three_prime_UTR
GCAGTATAATTTGTTGAGGT+GGG 0.504182 1_2:-47568433 Msa0073710:five_prime_UTR
TAACCAAAAGATGCCTCTCT+TGG 0.506202 1_2:+47567935 None:intergenic
AAGGACTGTTCCACCCTGCC+CGG 0.506812 1_2:-47565815 Msa0073710:five_prime_UTR
TCAAAACTTTCAATACCATA+AGG 0.507643 1_2:+47567421 None:intergenic
ATCTGATATTGATGCAAGGT+TGG 0.508434 1_2:-47566930 Msa0073710:five_prime_UTR
AATAGGTACTGCTTGATCAT+GGG 0.508944 1_2:+47563676 None:intergenic
GTTGTCCTGTATGAGTATCT+TGG 0.510312 1_2:-47566644 Msa0073710:five_prime_UTR
CTTGTGGAAATTATAGAGCA+TGG 0.510872 1_2:-47567517 Msa0073710:five_prime_UTR
TTTAGGTAGTCAATGCTGGC+TGG 0.510887 1_2:-47563759 Msa0073710:three_prime_UTR
TCTTCAGGAATCTGATAAAG+TGG 0.510895 1_2:+47568252 None:intergenic
CCTCCCTAACTTTCCGGGCA+GGG 0.511382 1_2:+47565802 None:intergenic
ACCTTACAGGCGAATGGTCA+TGG 0.511454 1_2:-47566987 Msa0073710:five_prime_UTR
TGGGATGAGACACCGACGCC+GGG 0.513612 1_2:-47568720 Msa0073710:five_prime_UTR
TGCGAAAGCCATTGGACCAC+AGG 0.513757 1_2:-47566318 Msa0073710:five_prime_UTR
TATTTCCCTCCCTTCAACAC+GGG 0.514922 1_2:+47567807 None:intergenic
TTTGGGTTGCGAGGATGCGC+TGG 0.515289 1_2:-47565967 Msa0073710:five_prime_UTR
ACACCTGGTGTTACTCCTGT+TGG 0.515327 1_2:-47568513 Msa0073710:five_prime_UTR
GATTCGAATGCAATGACACC+GGG 0.515801 1_2:-47568807 Msa0073710:five_prime_UTR
AATGTGATGCTTAATGGGTT+CGG 0.516022 1_2:-47566848 Msa0073710:five_prime_UTR
ATTGAATAATCTCAAGGTGC+AGG 0.516114 1_2:-47566279 Msa0073710:five_prime_UTR
GTAATCCCACCACTAAGCTT+AGG 0.516729 1_2:+47568630 None:intergenic
AAGTATCGACCTTTGAGCAA+TGG 0.516831 1_2:-47564016 Msa0073710:three_prime_UTR
TCTGATTCAATCTCCGTCTC+CGG 0.517371 1_2:+47569129 None:intergenic
GTTCTTAATTACTGTCTCCA+AGG 0.517599 1_2:-47565834 Msa0073710:five_prime_UTR
GTCTCCGGTAATCATCTTCA+CGG 0.517637 1_2:+47569144 None:intergenic
AGCAGTATAATTTGTTGAGG+TGG 0.517845 1_2:-47568434 Msa0073710:five_prime_UTR
TCGTATATCTGTTGGTATTG+AGG 0.519628 1_2:-47564103 Msa0073710:CDS
GATCAAGCAGTACCTATTGA+AGG 0.519836 1_2:-47563671 Msa0073710:three_prime_UTR
CCTGGTGTTACTCCTGTTGG+TGG 0.520763 1_2:-47568510 Msa0073710:five_prime_UTR
AGTTTGTACCTGCCAGAGAA+TGG 0.523117 1_2:-47566427 Msa0073710:five_prime_UTR
TTGACCGTGAAGATGATTAC+CGG 0.523129 1_2:-47569148 Msa0073710:five_prime_UTR
TTCGAAGAAGAAGAAGGAAG+AGG 0.523248 1_2:-47568976 Msa0073710:five_prime_UTR
CATTGGACCACAGGATGTCC+TGG 0.524695 1_2:-47566309 Msa0073710:five_prime_UTR
CGATACTCATTCATCAGTGC+TGG 0.524696 1_2:+47566182 None:intergenic
CGAAGAGACAAAGATCAAGA+TGG 0.525075 1_2:-47568599 Msa0073710:five_prime_UTR
GATGCTTAAGGCACACAAGA+AGG 0.525703 1_2:-47566378 Msa0073710:five_prime_UTR
CGCAGAGGAAAACTGCTTTG+AGG 0.525795 1_2:-47568044 Msa0073710:five_prime_UTR
TTCAAAATTGGAGTCAACCT+GGG 0.526301 1_2:+47566518 None:intergenic
GACTTCTTTAGTATAATAGC+TGG 0.526805 1_2:+47567288 None:intergenic
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 1_2:-47568427 Msa0073710:five_prime_UTR
GCCGTTTAGGTAGTCAATGC+TGG 0.527702 1_2:-47563763 Msa0073710:three_prime_UTR
ATCCTCATCCATTCTCTGGC+AGG 0.527834 1_2:+47566419 None:intergenic
ACCATGAGTGGTGGTTCTGT+GGG 0.528910 1_2:-47563507 Msa0073710:three_prime_UTR
TGGGATGCTACACCGACTCC+TGG 0.529207 1_2:-47568780 Msa0073710:five_prime_UTR
TCCCATCTATTCCTCCTCCC+AGG 0.529228 1_2:+47568738 None:intergenic
GGAAGTCATTGAAGGGATGA+GGG 0.532401 1_2:-47565877 Msa0073710:five_prime_UTR
TATAGCCTACCATCCTCCCT+AGG 0.533063 1_2:-47564660 Msa0073710:intron
GCGCAGTTGTAAACTCGCTC+GGG 0.533320 1_2:-47566826 Msa0073710:five_prime_UTR
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 1_2:-47567129 Msa0073710:five_prime_UTR
TGGTAAGGTTGCGCCGGAGA+AGG 0.533863 1_2:-47568946 Msa0073710:five_prime_UTR
TTTGCAAGGGTCGTTTACGC+CGG 0.534091 1_2:-47568457 Msa0073710:five_prime_UTR
AGCAGAATCAACAGCAGAAG+AGG 0.534224 1_2:-47568908 Msa0073710:five_prime_UTR
GCATATAAGGCTTCCATCAA+CGG 0.534950 1_2:+47567310 None:intergenic
GTGTGTGAGCACTGAGGGTG+TGG 0.535884 1_2:-47567191 Msa0073710:five_prime_UTR
GGTTGATTCTGATGCTACAC+CGG 0.536421 1_2:-47568691 Msa0073710:five_prime_UTR
CTGACAGACGGCCTTCAAGA+AGG 0.536511 1_2:+47567636 None:intergenic
TCTCAGTAAAGCTGCTGGGT+TGG 0.536657 1_2:-47567776 Msa0073710:five_prime_UTR
CTTCTCCAAGATACTCATAC+AGG 0.537984 1_2:+47566639 None:intergenic
TGCTGTGACTCCTTTGCTTG+AGG 0.538576 1_2:-47566069 Msa0073710:five_prime_UTR
AAAACCTTATACCCTTCTTG+TGG 0.539245 1_2:+47568351 None:intergenic
TATTACAAAGGATACAGATT+CGG 0.539844 1_2:+47563863 None:intergenic
GAAGGGATGAGGGTAGCCTT+GGG 0.540075 1_2:-47565867 Msa0073710:five_prime_UTR
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 1_2:+47567949 None:intergenic
GAATGAAGAGGAGTTGTCTC+CGG 0.542145 1_2:-47568127 Msa0073710:five_prime_UTR
AACGCCTGGTGGTGCTACTT+GGG 0.542257 1_2:-47568661 Msa0073710:five_prime_UTR
ATCACAGCATTTATCACATG+TGG 0.542295 1_2:+47565900 None:intergenic
CTCCGGATGAGCAGAAAGAG+AGG 0.543658 1_2:-47568110 Msa0073710:five_prime_UTR
TTGCTGCACAATCTTAATCC+CGG 0.544337 1_2:+47567585 None:intergenic
AGTGGCTGGTTTGGGTTGCG+AGG 0.545104 1_2:-47565976 Msa0073710:five_prime_UTR
ATTGAATCAGATTCTTTCGC+CGG 0.546582 1_2:-47569117 Msa0073710:five_prime_UTR
GCAAAAGCATCATGTCGATC+CGG 0.547159 1_2:+47569098 None:intergenic
ACACCTGCTGCTTATACACC+TGG 0.547877 1_2:-47568528 Msa0073710:five_prime_UTR
CAACAGCAATTCTTGAAATG+AGG 0.547976 1_2:+47566711 None:intergenic
AACTCTATTGAATAATCTCA+AGG 0.549147 1_2:-47566285 Msa0073710:five_prime_UTR
GAACAATTGATGGGTCATCT+TGG 0.549166 1_2:-47566668 Msa0073710:five_prime_UTR
ACCCACAGAACCACCACTCA+TGG 0.550365 1_2:+47563506 None:intergenic
TTTCCACAAGAGATCTCAGA+TGG 0.550608 1_2:+47567530 None:intergenic
CTAATCGGCACATAAGAAGC+TGG 0.552031 1_2:+47568321 None:intergenic
TAAGACCTAACAGACGGATC+CGG 0.553187 1_2:+47569059 None:intergenic
ATGCTATGTTTCCACAAGAA+GGG 0.554606 1_2:-47568362 Msa0073710:five_prime_UTR
GAGAAGGTGGTCACTAACTT+GGG 0.558654 1_2:-47566956 Msa0073710:five_prime_UTR
ACACCGGGTGGTGTAACGCC+TGG 0.559480 1_2:-47568675 Msa0073710:five_prime_UTR
ATAATGAATTTGTTACGTCT+CGG 0.561088 1_2:-47569178 Msa0073710:five_prime_UTR
AAATTGAACCTAGAACTTCT+GGG 0.561337 1_2:+47566612 None:intergenic
GATGCTATGTTTCCACAAGA+AGG 0.561803 1_2:-47568363 Msa0073710:five_prime_UTR
GGGAGAGGGATATTGAAGAG+AGG 0.562525 1_2:-47568413 Msa0073710:five_prime_UTR
GAATTGGCTACACCTACTCC+TGG 0.563974 1_2:-47568483 Msa0073710:five_prime_UTR
CGGAACAGCCATGTTATGAC+CGG 0.564377 1_2:+47569226 None:intergenic
CCACCAGGCGTTACACCACC+CGG 0.565365 1_2:+47568672 None:intergenic
TGACAGACGGCCTTCAAGAA+GGG 0.565592 1_2:+47567637 None:intergenic
GTTACACTTCCCATAGTAGC+AGG 0.566318 1_2:+47568567 None:intergenic
ATGCTTAAGGCACACAAGAA+GGG 0.566666 1_2:-47566377 Msa0073710:five_prime_UTR
GGTGTTGAAGCCATTGTGGA+AGG 0.566693 1_2:-47567395 Msa0073710:five_prime_UTR
CTGTTAAACCTCTGGTCTCG+CGG 0.567480 1_2:+47564136 None:intergenic
TTGCTACACCTACGCCGTTG+GGG 0.568070 1_2:-47568278 Msa0073710:five_prime_UTR
GATGTTCCTAAAGAAGCTCC+TGG 0.568413 1_2:-47568210 Msa0073710:five_prime_UTR
ATTAACAATTCTAAAGACGC+TGG 0.569709 1_2:-47569203 Msa0073710:five_prime_UTR
TTTCACCAATATACTCAAAG+AGG 0.569856 1_2:+47566111 None:intergenic
GCCGTGAAGCACATGGCACT+GGG 0.570780 1_2:-47565999 Msa0073710:five_prime_UTR
CTTCAGTAGCAGGAATTGAA+GGG 0.571142 1_2:+47569306 None:intergenic
CGTGTGACATAAAGCAAGGT+AGG 0.571228 1_2:+47564178 None:intergenic
GAATAGGCATGAGAAAGTCC+AGG 0.573723 1_2:-47566495 Msa0073710:five_prime_UTR
GACACCGACGCCGGGGAGGT+TGG 0.573817 1_2:-47568712 Msa0073710:five_prime_UTR
AGTGGAGTCCCCAACGGCGT+AGG 0.574440 1_2:+47568270 None:intergenic
TCTTGGCAAGCTCGGCACAC+CGG 0.574881 1_2:-47567604 Msa0073710:five_prime_UTR
GATTTCATCATCGGAAGCCA+TGG 0.575011 1_2:+47569436 None:intergenic
TGAATCAAACTAAATCAGAC+AGG 0.575099 1_2:+47563647 None:intergenic
TCCTGGGAGGAGGAATAGAT+GGG 0.575435 1_2:-47568739 Msa0073710:five_prime_UTR
GCCCCATCTGAGATCTCTTG+TGG 0.575595 1_2:-47567533 Msa0073710:five_prime_UTR
ACACCAGGTGTATAAGCAGC+AGG 0.575971 1_2:+47568525 None:intergenic
ATCACTAGTCTGCTCTTGGA+AGG 0.575981 1_2:+47566877 None:intergenic
TATTAGGCAACACCGTGGTA+AGG 0.576017 1_2:-47567371 Msa0073710:five_prime_UTR
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 1_2:-47567780 Msa0073710:five_prime_UTR
GATGAAACACCTGCTACTAT+GGG 0.577456 1_2:-47568576 Msa0073710:five_prime_UTR
ACTACTATGCCCGTGTTGAA+GGG 0.579026 1_2:-47567816 Msa0073710:five_prime_UTR
GAAGAGACAAAGATCAAGAT+GGG 0.579429 1_2:-47568598 Msa0073710:five_prime_UTR
CTACTCCTGGTGCTTTGCAA+GGG 0.581506 1_2:-47568470 Msa0073710:five_prime_UTR
ACATGTGATAAATGCTGTGA+TGG 0.582632 1_2:-47565898 Msa0073710:five_prime_UTR
GGAGAACTGTATTGACCTTG+TGG 0.582863 1_2:-47566474 Msa0073710:five_prime_UTR
TGCTGCTGGTGAGAAAACGC+CGG 0.582900 1_2:-47569078 Msa0073710:five_prime_UTR
GCATCCCAAGTAGCACCACC+AGG 0.583038 1_2:+47568657 None:intergenic
GTAAGAAATCTTGGCAAGCT+CGG 0.583586 1_2:-47567612 Msa0073710:five_prime_UTR
ATAGGTACTGCTTGATCATG+GGG 0.583777 1_2:+47563677 None:intergenic
AGAAGCTGGTAAGGTTGCGC+CGG 0.584245 1_2:-47568952 Msa0073710:five_prime_UTR
CTATGCCCGTGTTGAAGGGA+GGG 0.585454 1_2:-47567812 Msa0073710:five_prime_UTR
TATGTAAACATTGTCTGTGA+AGG 0.585477 1_2:-47563546 Msa0073710:three_prime_UTR
TGCCATGAGGAACAATTGAT+GGG 0.585856 1_2:-47566677 Msa0073710:five_prime_UTR
TCAGAATCAACCAACCTCCC+CGG 0.586207 1_2:+47568702 None:intergenic
TGCATCTGCCGTGAAGCACA+TGG 0.586302 1_2:-47566006 Msa0073710:five_prime_UTR
AAGGCTCGTGAATTTGGTGC+TGG 0.587291 1_2:-47568009 Msa0073710:five_prime_UTR
GTCATACACCGGTCATAACA+TGG 0.587366 1_2:-47569234 Msa0073710:five_prime_UTR
TCAACCAACCTCCCCGGCGT+CGG 0.588537 1_2:+47568708 None:intergenic
GAGAACTGTATTGACCTTGT+GGG 0.588815 1_2:-47566473 Msa0073710:five_prime_UTR
AACGACCCTTGCAAAGCACC+AGG 0.589295 1_2:+47568465 None:intergenic
TTGATGCTACTCCTGGGAGG+AGG 0.589686 1_2:-47568749 Msa0073710:five_prime_UTR
GTTGATTCTGATGCTACACC+GGG 0.590223 1_2:-47568690 Msa0073710:five_prime_UTR
TGTGCTCATCCTCTAGTGAT+GGG 0.590227 1_2:+47565718 None:intergenic
TAATCTTCAGGCTTCATGAA+AGG 0.591828 1_2:+47568180 None:intergenic
CGGAGCAGTATAATTTGTTG+AGG 0.592027 1_2:-47568437 Msa0073710:five_prime_UTR
AGAATCAACAGCAGAAGAGG+AGG 0.592190 1_2:-47568905 Msa0073710:five_prime_UTR
TACCTGCCAGAGAATGGATG+AGG 0.593216 1_2:-47566421 Msa0073710:five_prime_UTR
AAGAAACTACAAGCAACTTG+TGG 0.594902 1_2:-47567092 Msa0073710:five_prime_UTR
TCAATAATTCTACCAGGAGT+CGG 0.595905 1_2:+47568768 None:intergenic
ACTGTATTGACCTTGTGGGT+AGG 0.597148 1_2:-47566469 Msa0073710:five_prime_UTR
GACCCATCAATTGTTCCTCA+TGG 0.598532 1_2:+47566675 None:intergenic
GCAGAAGAGGAGGAATAGAT+GGG 0.600043 1_2:-47568895 Msa0073710:five_prime_UTR
ATGTTATGACCGGTGTATGA+CGG 0.601107 1_2:+47569236 None:intergenic
CATGGAAACTATTGAGAAGG+TGG 0.601383 1_2:-47566969 Msa0073710:five_prime_UTR
GCTGCAGTCCGCGAGACCAG+AGG 0.604752 1_2:-47564144 Msa0073710:CDS
GGTCATGGAAACTATTGAGA+AGG 0.604849 1_2:-47566972 Msa0073710:five_prime_UTR
GCAACACCGTGGTAAGGTGT+TGG 0.607313 1_2:-47567365 Msa0073710:five_prime_UTR
GAATTATTGATGCTACTCCT+GGG 0.607542 1_2:-47568755 Msa0073710:five_prime_UTR
CAGAATCAGAATCAGGAGGA+AGG 0.608189 1_2:-47568870 Msa0073710:five_prime_UTR
TCAAGCTCTTCATCAGTCAA+AGG 0.608967 1_2:+47568384 None:intergenic
CCTTGCAAAGCACCAGGAGT+AGG 0.610768 1_2:+47568471 None:intergenic
AAGAACAACAGCAGAACCCA+AGG 0.611634 1_2:+47565851 None:intergenic
TAGACAATGCACTTAGAACT+GGG 0.611766 1_2:-47564056 Msa0073710:CDS
ATGAGAGCGTCCTCAAGCAA+AGG 0.614099 1_2:+47566059 None:intergenic
GTATATTGGTGAAATGGGAA+AGG 0.614596 1_2:-47566102 Msa0073710:five_prime_UTR
ACTATGCCCGTGTTGAAGGG+AGG 0.615072 1_2:-47567813 Msa0073710:five_prime_UTR
TAAGCAGCAGGTGTAGCACC+AGG 0.616137 1_2:+47568537 None:intergenic
GATATCAGTTCTAATATACT+CGG 0.616544 1_2:+47567165 None:intergenic
CCCTGCCCGGAAAGTTAGGG+AGG 0.616795 1_2:-47565802 Msa0073710:five_prime_UTR
AGATTTGTGGTACAATCAAG+TGG 0.616908 1_2:-47566778 Msa0073710:five_prime_UTR
TTAAGTATACTTACCATGAG+TGG 0.617099 1_2:-47563519 Msa0073710:three_prime_UTR
TTATTTCCCTCCCTTCAACA+CGG 0.617901 1_2:+47567806 None:intergenic
TAGTTCATCCCATTGCTCAA+AGG 0.618037 1_2:+47564007 None:intergenic
GCCATAGAGATCTGTGTCGA+AGG 0.618745 1_2:+47569352 None:intergenic
GGTGTAGCATCCCATATCCC+CGG 0.621701 1_2:+47568789 None:intergenic
CAGTGCTGGCAAAATTGTGA+AGG 0.621769 1_2:+47566196 None:intergenic
GCTACTCCTAAGCTTAGTGG+TGG 0.624941 1_2:-47568636 Msa0073710:five_prime_UTR
AGATTTCTTACTCTGACAGA+CGG 0.626383 1_2:+47567624 None:intergenic
CTACTTTGGAGGACCAAGAG+AGG 0.627256 1_2:-47567948 Msa0073710:five_prime_UTR
CCACCAACAGGAGTAACACC+AGG 0.627500 1_2:+47568510 None:intergenic
GGAAGTGTAACTCCATTACC+TGG 0.628667 1_2:-47568555 Msa0073710:five_prime_UTR
CTACTATGATTGCTGCCATG+AGG 0.628805 1_2:-47567753 Msa0073710:five_prime_UTR
TGTCTCTGCAACAATAGCAA+TGG 0.633675 1_2:+47566226 None:intergenic
GGAAGCAAATCCTTAATAGG+TGG 0.634174 1_2:+47566539 None:intergenic
ACTCGGTGTTGAAGCCATTG+TGG 0.634246 1_2:-47567399 Msa0073710:five_prime_UTR
GAGTGAACCTTACAGGCGAA+TGG 0.634771 1_2:-47566993 Msa0073710:five_prime_UTR
AAACAGTGTGTGAGCACTGA+GGG 0.635126 1_2:-47567196 Msa0073710:five_prime_UTR
AGTATACTTACCATGAGTGG+TGG 0.635882 1_2:-47563516 Msa0073710:three_prime_UTR
TGAGGACGCTCTCATGGACA+GGG 0.635895 1_2:-47566051 Msa0073710:five_prime_UTR
ATAATCTCAAGGTGCAGGAG+AGG 0.636931 1_2:-47566274 Msa0073710:five_prime_UTR
TGATTCGAATGCAATGACAC+CGG 0.637185 1_2:-47568808 Msa0073710:five_prime_UTR
AAAGTAGGCTGCATAAGCAA+CGG 0.637377 1_2:+47567964 None:intergenic
GTGTTGAAGCCATTGTGGAA+GGG 0.637421 1_2:-47567394 Msa0073710:five_prime_UTR
TTCATGAAAGGTAAACCACC+AGG 0.637522 1_2:+47568192 None:intergenic
GTGGGTAGGATTGCTGATCG+TGG 0.638976 1_2:-47566455 Msa0073710:five_prime_UTR
TATGACCGGTGTATGACGGA+AGG 0.639550 1_2:+47569240 None:intergenic
CCCTAACTTTCCGGGCAGGG+TGG 0.640804 1_2:+47565805 None:intergenic
TTCCACAAGAGATCTCAGAT+GGG 0.642677 1_2:+47567531 None:intergenic
ACAACAAGAGTGCAAAGGTG+AGG 0.643017 1_2:-47566748 Msa0073710:five_prime_UTR
GCTGTGATGGAAGTCATTGA+AGG 0.647530 1_2:-47565885 Msa0073710:five_prime_UTR
ATCGGCACATAAGAAGCTGG+AGG 0.647881 1_2:+47568324 None:intergenic
TGCAGCATACCCATCACTAG+AGG 0.648920 1_2:-47565727 Msa0073710:five_prime_UTR
ACTACATCTCAATATTACAA+AGG 0.650842 1_2:+47563851 None:intergenic
GACGGTTGAGATAGCAAACA+AGG 0.652931 1_2:-47567065 Msa0073710:five_prime_UTR
GGCAGTATTCGGTTAAACAA+AGG 0.653268 1_2:+47567985 None:intergenic
CTGTGATGGAAGTCATTGAA+GGG 0.653556 1_2:-47565884 Msa0073710:five_prime_UTR
TAGTCTTCATCAATCAAAAG+GGG 0.654336 1_2:+47567835 None:intergenic
TGCCTAATACCCTTCCACAA+TGG 0.654446 1_2:+47567385 None:intergenic
ATGAATTTGTTACGTCTCGG+AGG 0.654569 1_2:-47569175 Msa0073710:five_prime_UTR
CTACTCCTAAGCTTAGTGGT+GGG 0.655445 1_2:-47568635 Msa0073710:five_prime_UTR
AATCAGAATCAGGAGGAAGG+TGG 0.655526 1_2:-47568867 Msa0073710:five_prime_UTR
GTTTCTGCGAGGAATAACTT+CGG 0.656445 1_2:+47569262 None:intergenic
ATGAGACACCGACGCCGGGG+AGG 0.656594 1_2:-47568716 Msa0073710:five_prime_UTR
GTTAAACAACAAGAGTGCAA+AGG 0.657032 1_2:-47566753 Msa0073710:five_prime_UTR
AGAAACCTTCCGTCATACAC+CGG 0.660879 1_2:-47569245 Msa0073710:five_prime_UTR
ATATATGAAGTGTTTCGTGA+AGG 0.661277 1_2:+47569501 None:intergenic
TCCACAAGAGATCTCAGATG+GGG 0.662742 1_2:+47567532 None:intergenic
CTAGCGTGTGACATAAAGCA+AGG 0.663677 1_2:+47564174 None:intergenic
CAGAACCATAACCATAACCA+TGG 0.664049 1_2:-47569453 Msa0073710:five_prime_UTR
TCGGCACATAAGAAGCTGGA+GGG 0.665180 1_2:+47568325 None:intergenic
AGAACGGCACGCCACCGCAG+AGG 0.666100 1_2:-47568059 Msa0073710:five_prime_UTR
CAAGCAACTTGTGGAGACGA+CGG 0.666170 1_2:-47567083 Msa0073710:five_prime_UTR
TGATAAAGTGGAGTCCCCAA+CGG 0.670541 1_2:+47568264 None:intergenic
ATGGGATGAGACACCGACGC+CGG 0.670705 1_2:-47568721 Msa0073710:five_prime_UTR
GTAGCATCAATAATTCTACC+AGG 0.671201 1_2:+47568762 None:intergenic
GATCATCTGATATTGATGCA+AGG 0.673357 1_2:-47566934 Msa0073710:five_prime_UTR
GGATCAGAATCAGAATCAGG+AGG 0.675250 1_2:-47568874 Msa0073710:five_prime_UTR
TGCCGATTAGGACACCTGCA+AGG 0.675865 1_2:-47568308 Msa0073710:five_prime_UTR
TCAGCATAAGACCTAACAGA+CGG 0.678144 1_2:+47569053 None:intergenic
TTTGTGGTACAATCAAGTGG+AGG 0.684064 1_2:-47566775 Msa0073710:five_prime_UTR
CAGATTCCTGAAGAGAATCG+TGG 0.685997 1_2:-47568243 Msa0073710:five_prime_UTR
AACAATAGCAATGGCCACAG+TGG 0.686867 1_2:+47566235 None:intergenic
AGAGTTGCCAGGACATCCTG+TGG 0.687187 1_2:+47566302 None:intergenic
TTGATTGTACCACAAATCTG+AGG 0.687976 1_2:+47566782 None:intergenic
TTTGAATGATGAGAATCAGA+AGG 0.688179 1_2:-47567494 Msa0073710:five_prime_UTR
CCGGGTGGTGTAACGCCTGG+TGG 0.692520 1_2:-47568672 Msa0073710:five_prime_UTR
GTTCCTAAAGAAGCTCCTGG+TGG 0.695657 1_2:-47568207 Msa0073710:five_prime_UTR
GTTGAGATAGCAAACAAGGT+CGG 0.698379 1_2:-47567061 Msa0073710:five_prime_UTR
AGTGCTGGCAAAATTGTGAA+GGG 0.702395 1_2:+47566197 None:intergenic
GGGATGAGACACCGACGCCG+GGG 0.702741 1_2:-47568719 Msa0073710:five_prime_UTR
GATTCTGATGCTACACCGGG+TGG 0.710329 1_2:-47568687 Msa0073710:five_prime_UTR
TTATTGATGCTACTCCTGGG+AGG 0.712237 1_2:-47568752 Msa0073710:five_prime_UTR
ATACTTGAATGAAATTACAG+AGG 0.713243 1_2:+47564033 None:intergenic
GATCAGCAATCCTACCCACA+AGG 0.716041 1_2:+47566459 None:intergenic
GTGAAGATGATTACCGGAGA+CGG 0.717111 1_2:-47569142 Msa0073710:five_prime_UTR
ACGCAGCCAACACCTTACCA+CGG 0.731663 1_2:+47567359 None:intergenic
ATTCGAATGCAATGACACCG+GGG 0.741512 1_2:-47568806 Msa0073710:five_prime_UTR
TGTCATGAAGCAGTGCCATG+AGG 0.764533 1_2:-47566690 Msa0073710:five_prime_UTR
GAAACAGTGTGTGAGCACTG+AGG 0.771981 1_2:-47567197 Msa0073710:five_prime_UTR
GAATCGTGTGTGCACCACTG+TGG 0.784014 1_2:-47566249 Msa0073710:five_prime_UTR
TATGACGGAAGGTTTCTGCG+AGG 0.791111 1_2:+47569251 None:intergenic
AAGGGTATTAGGCAACACCG+TGG 0.809985 1_2:-47567376 Msa0073710:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTCAAATTTTATAATAT+TGG - chr1_2:47569316-47569335 Msa0073710:five_prime_UTR 10.0%
!! ATTCTAAATATAACAAACTA+AGG + chr1_2:47567709-47567728 None:intergenic 15.0%
!! TTATCTATTATGATGAAAAA+TGG - chr1_2:47568991-47569010 Msa0073710:five_prime_UTR 15.0%
!! TGATAGAGTTCTTTATAAAT+TGG - chr1_2:47565042-47565061 Msa0073710:intron 20.0%
!! TCTTTATAAATTGGATGAAT+TGG - chr1_2:47565051-47565070 Msa0073710:intron 20.0%
!! ATAACATTGATGAATATGTT+AGG - chr1_2:47565227-47565246 Msa0073710:intron 20.0%
!! ATATATAACTCTCTGTATAT+TGG - chr1_2:47567179-47567198 Msa0073710:five_prime_UTR 20.0%
!!! AATAACTTCATTTTGAGAAA+TGG - chr1_2:47567469-47567488 Msa0073710:five_prime_UTR 20.0%
!!! GAATTTAAAAAATGCTACTT+TGG - chr1_2:47567781-47567800 Msa0073710:five_prime_UTR 20.0%
!!! TTTGAAGATGAGTTTTAAAT+AGG + chr1_2:47568077-47568096 None:intergenic 20.0%
!! AAACTTGGATATGAATTAAT+AGG + chr1_2:47569347-47569366 None:intergenic 20.0%
!!! ATAATGAATTTGTTACGTCT+CGG - chr1_2:47563769-47563788 Msa0073710:three_prime_UTR 25.0%
!! CTGAAGATTATCAGTATTTT+GGG - chr1_2:47564780-47564799 Msa0073710:intron 25.0%
!! TGAAGATTATCAGTATTTTG+GGG - chr1_2:47564781-47564800 Msa0073710:intron 25.0%
! TCAAAACTTTCAATACCATA+AGG + chr1_2:47565529-47565548 None:intergenic 25.0%
!!! GAAGAAAATTGTTTTGAAAG+TGG - chr1_2:47565726-47565745 Msa0073710:five_prime_UTR 25.0%
!! GATATCAGTTCTAATATACT+CGG + chr1_2:47565785-47565804 None:intergenic 25.0%
! AACTCTATTGAATAATCTCA+AGG - chr1_2:47566662-47566681 Msa0073710:five_prime_UTR 25.0%
! TTTGAGTATATTGGTGAAAT+GGG - chr1_2:47566840-47566859 Msa0073710:five_prime_UTR 25.0%
! GATTTCAATCATCTATGTAT+TGG - chr1_2:47567292-47567311 Msa0073710:five_prime_UTR 25.0%
! ATCTCTACCAAAATAAAACA+CGG + chr1_2:47567401-47567420 None:intergenic 25.0%
! AAATCATCAGTTAGTAGTTA+TGG - chr1_2:47567432-47567451 Msa0073710:five_prime_UTR 25.0%
!!! TGATGTTTTAGCGTTTTTAT+AGG - chr1_2:47567545-47567564 Msa0073710:five_prime_UTR 25.0%
! AAAATAGAGTCATATCTTCA+AGG + chr1_2:47567680-47567699 None:intergenic 25.0%
!!! AGATGAGTTTTAAATAGGAA+TGG + chr1_2:47568072-47568091 None:intergenic 25.0%
! TGTTAACAATTTATTTCACG+TGG - chr1_2:47568198-47568217 Msa0073710:five_prime_UTR 25.0%
! TTACAGAAGTTAAAAACCTA+GGG + chr1_2:47568306-47568325 None:intergenic 25.0%
! AGCTAAGATTTCTTAAATAG+TGG - chr1_2:47568411-47568430 Msa0073710:five_prime_UTR 25.0%
! AGCTAAGATTTCTTAAATAG+TGG - chr1_2:47568411-47568430 Msa0073710:five_prime_UTR 25.0%
! ATACTTGAATGAAATTACAG+AGG + chr1_2:47568917-47568936 None:intergenic 25.0%
!!! CTATATGCTTGTTTTAAATG+AGG - chr1_2:47568960-47568979 Msa0073710:five_prime_UTR 25.0%
! TATTACAAAGGATACAGATT+CGG + chr1_2:47569087-47569106 None:intergenic 25.0%
! ACTACATCTCAATATTACAA+AGG + chr1_2:47569099-47569118 None:intergenic 25.0%
!! AAAATAAATGTTCTGAGCTT+TGG + chr1_2:47569140-47569159 None:intergenic 25.0%
! TGAAGGTGAAGAAGATTTTT+GGG + chr1_2:47563432-47563451 None:intergenic 30.0%
! ATATATGAAGTGTTTCGTGA+AGG + chr1_2:47563449-47563468 None:intergenic 30.0%
TCACGAAACACTTCATATAT+AGG - chr1_2:47563449-47563468 Msa0073710:three_prime_UTR 30.0%
CACGAAACACTTCATATATA+GGG - chr1_2:47563450-47563469 Msa0073710:three_prime_UTR 30.0%
!! GCGTCTTTAGAATTGTTAAT+CGG + chr1_2:47563744-47563763 None:intergenic 30.0%
! ATTAACAATTCTAAAGACGC+TGG - chr1_2:47563744-47563763 Msa0073710:three_prime_UTR 30.0%
GTTAATTTCGAAGAAGAAGA+AGG - chr1_2:47563965-47563984 Msa0073710:three_prime_UTR 30.0%
CCAAAATACTGATAATCTTC+AGG + chr1_2:47564782-47564801 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG - chr1_2:47564779-47564798 Msa0073710:intron 30.0%
! CTTTTGCTTAAAGTGAAGAA+CGG - chr1_2:47564872-47564891 Msa0073710:intron 30.0%
ACAAGAATCTTATGCACATA+AGG + chr1_2:47565082-47565101 None:intergenic 30.0%
TAGTCTTCATCAATCAAAAG+GGG + chr1_2:47565115-47565134 None:intergenic 30.0%
GTAGTCTTCATCAATCAAAA+GGG + chr1_2:47565116-47565135 None:intergenic 30.0%
AGTAGTCTTCATCAATCAAA+AGG + chr1_2:47565117-47565136 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG + chr1_2:47565220-47565239 None:intergenic 30.0%
!!! CAGCAAATTGCTATTTTGAT+TGG - chr1_2:47565379-47565398 Msa0073710:intron 30.0%
TTTGAATGATGAGAATCAGA+AGG - chr1_2:47565453-47565472 Msa0073710:intron 30.0%
!!! TGGTATTGAAAGTTTTGACT+CGG - chr1_2:47565531-47565550 Msa0073710:intron 30.0%
AGTATAATAGCTGGCATATA+AGG + chr1_2:47565653-47565672 None:intergenic 30.0%
GACTTCTTTAGTATAATAGC+TGG + chr1_2:47565662-47565681 None:intergenic 30.0%
AAGTCATGCTTATTCTGATT+CGG - chr1_2:47565677-47565696 Msa0073710:five_prime_UTR 30.0%
! ATTTTCTTCATTTCTTCGTC+AGG + chr1_2:47565715-47565734 None:intergenic 30.0%
ATGCTAATGTGATGCTTAAT+GGG - chr1_2:47566094-47566113 Msa0073710:five_prime_UTR 30.0%
AAATTGAACCTAGAACTTCT+GGG + chr1_2:47566338-47566357 None:intergenic 30.0%
AAAATTGAACCTAGAACTTC+TGG + chr1_2:47566339-47566358 None:intergenic 30.0%
!!! AGAAGTTCTAGGTTCAATTT+TGG - chr1_2:47566338-47566357 Msa0073710:five_prime_UTR 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG - chr1_2:47566339-47566358 Msa0073710:five_prime_UTR 30.0%
AAGTCGATTGTCAATGTTAT+TGG - chr1_2:47566369-47566388 Msa0073710:five_prime_UTR 30.0%
!! TGACTCCAATTTTGAAGAAT+AGG - chr1_2:47566436-47566455 Msa0073710:five_prime_UTR 30.0%
TCATGCCTATTCTTCAAAAT+TGG + chr1_2:47566444-47566463 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG - chr1_2:47566831-47566850 Msa0073710:five_prime_UTR 30.0%
TTTCACCAATATACTCAAAG+AGG + chr1_2:47566839-47566858 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG - chr1_2:47566839-47566858 Msa0073710:five_prime_UTR 30.0%
! CTCTCTGAATTGTAGTATTT+TGG - chr1_2:47567321-47567340 Msa0073710:five_prime_UTR 30.0%
! AAACTTTTCGCACAAAAAAG+TGG + chr1_2:47567370-47567389 None:intergenic 30.0%
!!! TATTGCACCGTGTTTTATTT+TGG - chr1_2:47567391-47567410 Msa0073710:five_prime_UTR 30.0%
!!! TTGTTTTCTAAAGCAATGTG+TGG + chr1_2:47567498-47567517 None:intergenic 30.0%
!! CATTGCTTTAGAAAACAATG+TGG - chr1_2:47567500-47567519 Msa0073710:five_prime_UTR 30.0%
TAAAAACGCTAAAACATCAC+AGG + chr1_2:47567544-47567563 None:intergenic 30.0%
CTACAACAGTTTATCTTACA+TGG - chr1_2:47567568-47567587 Msa0073710:five_prime_UTR 30.0%
AAGACACTAGATTACGTTAT+CGG + chr1_2:47567627-47567646 None:intergenic 30.0%
!! TAAAAAATGCTACTTTGGTC+TGG - chr1_2:47567786-47567805 Msa0073710:five_prime_UTR 30.0%
!! AAAAAATGCTACTTTGGTCT+GGG - chr1_2:47567787-47567806 Msa0073710:five_prime_UTR 30.0%
GAGAGTAGTTTATGAAAACA+AGG - chr1_2:47567899-47567918 Msa0073710:five_prime_UTR 30.0%
!! ACACGCTTTAGAAATCTAAT+AGG + chr1_2:47568101-47568120 None:intergenic 30.0%
CTATAATAAGCAAAGCCAAA+TGG + chr1_2:47568272-47568291 None:intergenic 30.0%
GTTACAGAAGTTAAAAACCT+AGG + chr1_2:47568307-47568326 None:intergenic 30.0%
!!! GACCATGTTATTTTTCTGAT+TGG - chr1_2:47568721-47568740 Msa0073710:five_prime_UTR 30.0%
TGCCAATCAGAAAAATAACA+TGG + chr1_2:47568726-47568745 None:intergenic 30.0%
!!! ATGTTATTTTTCTGATTGGC+AGG - chr1_2:47568725-47568744 Msa0073710:five_prime_UTR 30.0%
!!! TGTTATTTTTCTGATTGGCA+GGG - chr1_2:47568726-47568745 Msa0073710:five_prime_UTR 30.0%
AAAAATGGTTCTCCTAATTG+TGG - chr1_2:47569006-47569025 Msa0073710:five_prime_UTR 30.0%
TGAATCAAACTAAATCAGAC+AGG + chr1_2:47569303-47569322 None:intergenic 30.0%
! GTATCTCATGATTTGAAACT+TGG + chr1_2:47569362-47569381 None:intergenic 30.0%
AATCATGAGATACATTGCTT+TGG - chr1_2:47569369-47569388 Msa0073710:five_prime_UTR 30.0%
ATCATGAGATACATTGCTTT+GGG - chr1_2:47569370-47569389 Msa0073710:five_prime_UTR 30.0%
TATGTAAACATTGTCTGTGA+AGG - chr1_2:47569401-47569420 Msa0073710:five_prime_UTR 30.0%
TTAAGTATACTTACCATGAG+TGG - chr1_2:47569428-47569447 Msa0073710:five_prime_UTR 30.0%
! GTGAAGGTGAAGAAGATTTT+TGG + chr1_2:47563433-47563452 None:intergenic 35.0%
ATTGAATCAGATTCTTTCGC+CGG - chr1_2:47563830-47563849 Msa0073710:three_prime_UTR 35.0%
! GATTTTTCATTCTCCTTCTC+CGG + chr1_2:47564017-47564036 None:intergenic 35.0%
AAAAGGCTAAGACTTCTGAT+TGG - chr1_2:47564108-47564127 Msa0073710:CDS 35.0%
AAAGGCTAAGACTTCTGATT+GGG - chr1_2:47564109-47564128 Msa0073710:CDS 35.0%
TCAATAATTCTACCAGGAGT+CGG + chr1_2:47564182-47564201 None:intergenic 35.0%
GTAGCATCAATAATTCTACC+AGG + chr1_2:47564188-47564207 None:intergenic 35.0%
AGAATTATTGATGCTACTCC+TGG - chr1_2:47564191-47564210 Msa0073710:CDS 35.0%
GAATTATTGATGCTACTCCT+GGG - chr1_2:47564192-47564211 Msa0073710:CDS 35.0%
CATCTTGATCTTTGTCTCTT+CGG + chr1_2:47564350-47564369 None:intergenic 35.0%
GAAGAGACAAAGATCAAGAT+GGG - chr1_2:47564349-47564368 Msa0073710:intron 35.0%
CTCAACAAATTATACTGCTC+CGG + chr1_2:47564512-47564531 None:intergenic 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG - chr1_2:47564513-47564532 Msa0073710:intron 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG - chr1_2:47564514-47564533 Msa0073710:intron 35.0%
ATGCTATGTTTCCACAAGAA+GGG - chr1_2:47564585-47564604 Msa0073710:intron 35.0%
AAAACCTTATACCCTTCTTG+TGG + chr1_2:47564599-47564618 None:intergenic 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG - chr1_2:47564598-47564617 Msa0073710:intron 35.0%
TCTTCAGGAATCTGATAAAG+TGG + chr1_2:47564698-47564717 None:intergenic 35.0%
TAATCTTCAGGCTTCATGAA+AGG + chr1_2:47564770-47564789 None:intergenic 35.0%
GTTGAATGAAGAGAATGAAG+AGG - chr1_2:47564808-47564827 Msa0073710:intron 35.0%
! TTTGAGGCAGTTAACTGATA+AGG - chr1_2:47564919-47564938 Msa0073710:intron 35.0%
AGATTTCTTACTCTGACAGA+CGG + chr1_2:47565326-47565345 None:intergenic 35.0%
TCTGTCAGAGTAAGAAATCT+TGG - chr1_2:47565326-47565345 Msa0073710:intron 35.0%
CTTGTGGAAATTATAGAGCA+TGG - chr1_2:47565430-47565449 Msa0073710:intron 35.0%
!! CTGCGTTTTTGAAAGCAATT+GGG - chr1_2:47565605-47565624 Msa0073710:intron 35.0%
TGGGTTTATTATTCCGTTGA+TGG - chr1_2:47565624-47565643 Msa0073710:intron 35.0%
AGTCATGCTTATTCTGATTC+GGG - chr1_2:47565678-47565697 Msa0073710:five_prime_UTR 35.0%
! CAGAAGTTTCTGAAAAACTC+GGG + chr1_2:47565811-47565830 None:intergenic 35.0%
! CCAGAAGTTTCTGAAAAACT+CGG + chr1_2:47565812-47565831 None:intergenic 35.0%
!! CGAGTTTTTCAGAAACTTCT+GGG - chr1_2:47565810-47565829 Msa0073710:five_prime_UTR 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG - chr1_2:47565815-47565834 Msa0073710:five_prime_UTR 35.0%
AAGAAACTACAAGCAACTTG+TGG - chr1_2:47565855-47565874 Msa0073710:five_prime_UTR 35.0%
GATCATCTGATATTGATGCA+AGG - chr1_2:47566013-47566032 Msa0073710:five_prime_UTR 35.0%
ATCTGATATTGATGCAAGGT+TGG - chr1_2:47566017-47566036 Msa0073710:five_prime_UTR 35.0%
!! TTGGAAGAGCTTTTGATTGA+CGG - chr1_2:47566036-47566055 Msa0073710:five_prime_UTR 35.0%
GATGCTAATGTGATGCTTAA+TGG - chr1_2:47566093-47566112 Msa0073710:five_prime_UTR 35.0%
!! AATGTGATGCTTAATGGGTT+CGG - chr1_2:47566099-47566118 Msa0073710:five_prime_UTR 35.0%
TTGATTGTACCACAAATCTG+AGG + chr1_2:47566168-47566187 None:intergenic 35.0%
AGATTTGTGGTACAATCAAG+TGG - chr1_2:47566169-47566188 Msa0073710:five_prime_UTR 35.0%
! GTTAAACAACAAGAGTGCAA+AGG - chr1_2:47566194-47566213 Msa0073710:five_prime_UTR 35.0%
CAACAGCAATTCTTGAAATG+AGG + chr1_2:47566239-47566258 None:intergenic 35.0%
AAAGATGACTCCACCTATTA+AGG - chr1_2:47566398-47566417 Msa0073710:five_prime_UTR 35.0%
TTCAAAATTGGAGTCAACCT+GGG + chr1_2:47566432-47566451 None:intergenic 35.0%
GATTATTCAATAGAGTTGCC+AGG + chr1_2:47566659-47566678 None:intergenic 35.0%
ATTGAATAATCTCAAGGTGC+AGG - chr1_2:47566668-47566687 Msa0073710:five_prime_UTR 35.0%
! CCATTTTGCACATTAAGTTC+TGG + chr1_2:47566795-47566814 None:intergenic 35.0%
CCAGAACTTAATGTGCAAAA+TGG - chr1_2:47566792-47566811 Msa0073710:five_prime_UTR 35.0%
GTATATTGGTGAAATGGGAA+AGG - chr1_2:47566845-47566864 Msa0073710:five_prime_UTR 35.0%
GGAGACGTTTCAAATATGTT+TGG + chr1_2:47567029-47567048 None:intergenic 35.0%
ATCACAGCATTTATCACATG+TGG + chr1_2:47567050-47567069 None:intergenic 35.0%
ACATGTGATAAATGCTGTGA+TGG - chr1_2:47567049-47567068 Msa0073710:five_prime_UTR 35.0%
GTTCTTAATTACTGTCTCCA+AGG - chr1_2:47567113-47567132 Msa0073710:five_prime_UTR 35.0%
GTGGAACATGCATAAAAGTT+GGG + chr1_2:47567351-47567370 None:intergenic 35.0%
AGTGGAACATGCATAAAAGT+TGG + chr1_2:47567352-47567371 None:intergenic 35.0%
TTTAGAAAACAATGTGGCGA+AGG - chr1_2:47567506-47567525 Msa0073710:five_prime_UTR 35.0%
CAACAGTTTATCTTACATGG+TGG - chr1_2:47567571-47567590 Msa0073710:five_prime_UTR 35.0%
AGACACTAGATTACGTTATC+GGG + chr1_2:47567626-47567645 None:intergenic 35.0%
ATCTTCAAGGTAGAGATAAC+TGG + chr1_2:47567667-47567686 None:intergenic 35.0%
ATGTTGGATATTCAGGTGAT+TGG + chr1_2:47567749-47567768 None:intergenic 35.0%
ATCACCTGAATATCCAACAT+TGG - chr1_2:47567749-47567768 Msa0073710:five_prime_UTR 35.0%
TCACCTGAATATCCAACATT+GGG - chr1_2:47567750-47567769 Msa0073710:five_prime_UTR 35.0%
!! TCTTTGTTTCTTTTGCCTGA+TGG - chr1_2:47568363-47568382 Msa0073710:five_prime_UTR 35.0%
! CTGATTAGGGATTTTACACA+TGG + chr1_2:47568473-47568492 None:intergenic 35.0%
AAGATCTTCTGTTAAACCTC+TGG + chr1_2:47568546-47568565 None:intergenic 35.0%
GATCTTGTTCGTATATCTGT+TGG - chr1_2:47568560-47568579 Msa0073710:five_prime_UTR 35.0%
TCGTATATCTGTTGGTATTG+AGG - chr1_2:47568568-47568587 Msa0073710:five_prime_UTR 35.0%
TAGACAATGCACTTAGAACT+GGG - chr1_2:47568615-47568634 Msa0073710:five_prime_UTR 35.0%
AGCTGCCAAATTAATTACAG+AGG + chr1_2:47568641-47568660 None:intergenic 35.0%
AAGATCTTCTGTTAAACCTC+TGG + chr1_2:47568546-47568565 None:intergenic 35.0%
GATCTTGTTCGTATATCTGT+TGG - chr1_2:47568560-47568579 Msa0073710:five_prime_UTR 35.0%
TCGTATATCTGTTGGTATTG+AGG - chr1_2:47568568-47568587 Msa0073710:five_prime_UTR 35.0%
TAGACAATGCACTTAGAACT+GGG - chr1_2:47568615-47568634 Msa0073710:five_prime_UTR 35.0%
! TTCTGTATCAAATGCCGTTT+AGG - chr1_2:47569171-47569190 Msa0073710:five_prime_UTR 35.0%
! TCATAAGGCTCAAAGACTTT+TGG - chr1_2:47569220-47569239 Msa0073710:five_prime_UTR 35.0%
! AATAGGTACTGCTTGATCAT+GGG + chr1_2:47569274-47569293 None:intergenic 35.0%
ACTAAAAACTGTTTCGCAGA+GGG + chr1_2:47569496-47569515 None:intergenic 35.0%
AACTAAAAACTGTTTCGCAG+AGG + chr1_2:47569497-47569516 None:intergenic 35.0%
!! ATGGTTATGGTTCTGGTTCA+AGG + chr1_2:47563489-47563508 None:intergenic 40.0%
CATGGTTATGGTTATGGTTC+TGG + chr1_2:47563496-47563515 None:intergenic 40.0%
CAGAACCATAACCATAACCA+TGG - chr1_2:47563494-47563513 Msa0073710:three_prime_UTR 40.0%
CGTCTTCTCGATTTCATCAT+CGG + chr1_2:47563523-47563542 None:intergenic 40.0%
CTTCAGTAGCAGGAATTGAA+GGG + chr1_2:47563644-47563663 None:intergenic 40.0%
TCTTCAGTAGCAGGAATTGA+AGG + chr1_2:47563645-47563664 None:intergenic 40.0%
GTTTCTTCTTCTTCAGTAGC+AGG + chr1_2:47563654-47563673 None:intergenic 40.0%
GTTTCTGCGAGGAATAACTT+CGG + chr1_2:47563688-47563707 None:intergenic 40.0%
ATGTTATGACCGGTGTATGA+CGG + chr1_2:47563714-47563733 None:intergenic 40.0%
!! ATGAATTTGTTACGTCTCGG+AGG - chr1_2:47563772-47563791 Msa0073710:three_prime_UTR 40.0%
TTGACCGTGAAGATGATTAC+CGG - chr1_2:47563799-47563818 Msa0073710:three_prime_UTR 40.0%
TCAGCATAAGACCTAACAGA+CGG + chr1_2:47563897-47563916 None:intergenic 40.0%
TTCGAAGAAGAAGAAGGAAG+AGG - chr1_2:47563971-47563990 Msa0073710:three_prime_UTR 40.0%
ATGGGATCAGAATCAGAATC+AGG - chr1_2:47564070-47564089 Msa0073710:CDS 40.0%
TGATTCGAATGCAATGACAC+CGG - chr1_2:47564139-47564158 Msa0073710:CDS 40.0%
CGAAGAGACAAAGATCAAGA+TGG - chr1_2:47564348-47564367 Msa0073710:intron 40.0%
GATGAAACACCTGCTACTAT+GGG - chr1_2:47564371-47564390 Msa0073710:intron 40.0%
!! CGGAGCAGTATAATTTGTTG+AGG - chr1_2:47564510-47564529 Msa0073710:intron 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG - chr1_2:47564519-47564538 Msa0073710:intron 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG - chr1_2:47564520-47564539 Msa0073710:intron 40.0%
GGGATATTGAAGAGAGGAAT+CGG - chr1_2:47564540-47564559 Msa0073710:intron 40.0%
TCAAGCTCTTCATCAGTCAA+AGG + chr1_2:47564566-47564585 None:intergenic 40.0%
GATGCTATGTTTCCACAAGA+AGG - chr1_2:47564584-47564603 Msa0073710:intron 40.0%
! GTTTCCACAAGAAGGGTATA+AGG - chr1_2:47564592-47564611 Msa0073710:intron 40.0%
TTCATGAAAGGTAAACCACC+AGG + chr1_2:47564758-47564777 None:intergenic 40.0%
ACTGATAAGGCTCGTGAATT+TGG - chr1_2:47564932-47564951 Msa0073710:intron 40.0%
GGCAGTATTCGGTTAAACAA+AGG + chr1_2:47564965-47564984 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG + chr1_2:47564986-47565005 None:intergenic 40.0%
TAACCAAAAGATGCCTCTCT+TGG + chr1_2:47565015-47565034 None:intergenic 40.0%
!!! AGAGAGGCATCTTTTGGTTA+AGG - chr1_2:47565015-47565034 Msa0073710:intron 40.0%
TTATTTCCCTCCCTTCAACA+CGG + chr1_2:47565144-47565163 None:intergenic 40.0%
TCTAATCTCAGTAAAGCTGC+TGG - chr1_2:47565166-47565185 Msa0073710:intron 40.0%
CTAATCTCAGTAAAGCTGCT+GGG - chr1_2:47565167-47565186 Msa0073710:intron 40.0%
TTCAAGAAGGGCAATAAAGC+AGG + chr1_2:47565301-47565320 None:intergenic 40.0%
! TGCTTTATTGCCCTTCTTGA+AGG - chr1_2:47565300-47565319 Msa0073710:intron 40.0%
GTAAGAAATCTTGGCAAGCT+CGG - chr1_2:47565335-47565354 Msa0073710:intron 40.0%
TTGCTGCACAATCTTAATCC+CGG + chr1_2:47565365-47565384 None:intergenic 40.0%
TTCCACAAGAGATCTCAGAT+GGG + chr1_2:47565419-47565438 None:intergenic 40.0%
TTTCCACAAGAGATCTCAGA+TGG + chr1_2:47565420-47565439 None:intergenic 40.0%
!! GCTGCGTTTTTGAAAGCAAT+TGG - chr1_2:47565604-47565623 Msa0073710:intron 40.0%
GCATATAAGGCTTCCATCAA+CGG + chr1_2:47565640-47565659 None:intergenic 40.0%
! AGTTTCTGAAAAACTCGGGA+AGG + chr1_2:47565807-47565826 None:intergenic 40.0%
!! CCGAGTTTTTCAGAAACTTC+TGG - chr1_2:47565809-47565828 Msa0073710:five_prime_UTR 40.0%
GTTGAGATAGCAAACAAGGT+CGG - chr1_2:47565886-47565905 Msa0073710:five_prime_UTR 40.0%
AAGATGAGAGTGAACCTTAC+AGG - chr1_2:47565947-47565966 Msa0073710:five_prime_UTR 40.0%
GGTCATGGAAACTATTGAGA+AGG - chr1_2:47565975-47565994 Msa0073710:five_prime_UTR 40.0%
CATGGAAACTATTGAGAAGG+TGG - chr1_2:47565978-47565997 Msa0073710:five_prime_UTR 40.0%
CCACAAATCTGAGGAAGATA+TGG + chr1_2:47566159-47566178 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG - chr1_2:47566156-47566175 Msa0073710:five_prime_UTR 40.0%
TTTGTGGTACAATCAAGTGG+AGG - chr1_2:47566172-47566191 Msa0073710:five_prime_UTR 40.0%
TGCCATGAGGAACAATTGAT+GGG - chr1_2:47566270-47566289 Msa0073710:five_prime_UTR 40.0%
! GAACAATTGATGGGTCATCT+TGG - chr1_2:47566279-47566298 Msa0073710:five_prime_UTR 40.0%
GTTGTCCTGTATGAGTATCT+TGG - chr1_2:47566303-47566322 Msa0073710:five_prime_UTR 40.0%
CTTCTCCAAGATACTCATAC+AGG + chr1_2:47566311-47566330 None:intergenic 40.0%
GGAAGCAAATCCTTAATAGG+TGG + chr1_2:47566411-47566430 None:intergenic 40.0%
CTGGGAAGCAAATCCTTAAT+AGG + chr1_2:47566414-47566433 None:intergenic 40.0%
! CTATTAAGGATTTGCTTCCC+AGG - chr1_2:47566412-47566431 Msa0073710:five_prime_UTR 40.0%
CTTCAAAATTGGAGTCAACC+TGG + chr1_2:47566433-47566452 None:intergenic 40.0%
! GAGAACTGTATTGACCTTGT+GGG - chr1_2:47566474-47566493 Msa0073710:five_prime_UTR 40.0%
TGAGCTTCTTGAGATGCTTA+AGG - chr1_2:47566557-47566576 Msa0073710:five_prime_UTR 40.0%
ATGCTTAAGGCACACAAGAA+GGG - chr1_2:47566570-47566589 Msa0073710:five_prime_UTR 40.0%
AGAGCTACTGTGAACACTTT+CGG - chr1_2:47566600-47566619 Msa0073710:five_prime_UTR 40.0%
GGATATATTGCGAAAGCCAT+TGG - chr1_2:47566621-47566640 Msa0073710:five_prime_UTR 40.0%
TGTCTCTGCAACAATAGCAA+TGG + chr1_2:47566724-47566743 None:intergenic 40.0%
!! AGTGCTGGCAAAATTGTGAA+GGG + chr1_2:47566753-47566772 None:intergenic 40.0%
! TCCATTTGCTGAACTATGTC+TGG - chr1_2:47567003-47567022 Msa0073710:five_prime_UTR 40.0%
! CTGTGATGGAAGTCATTGAA+GGG - chr1_2:47567063-47567082 Msa0073710:five_prime_UTR 40.0%
AAACGCTAAAACATCACAGG+AGG + chr1_2:47567541-47567560 None:intergenic 40.0%
TCAAGGTAGAGATAACTGGT+GGG + chr1_2:47567663-47567682 None:intergenic 40.0%
TTCAAGGTAGAGATAACTGG+TGG + chr1_2:47567664-47567683 None:intergenic 40.0%
AGTCCCAATGTTGGATATTC+AGG + chr1_2:47567756-47567775 None:intergenic 40.0%
TATCCAACATTGGGACTGAA+CGG - chr1_2:47567759-47567778 Msa0073710:five_prime_UTR 40.0%
CTTTCAAGACTACACTTGCT+TGG - chr1_2:47567959-47567978 Msa0073710:five_prime_UTR 40.0%
AAAGTGATCGATTGCATGCT+TGG + chr1_2:47567991-47568010 None:intergenic 40.0%
TTACTCCATGCACAAAACCA+CGG - chr1_2:47568043-47568062 Msa0073710:five_prime_UTR 40.0%
ACTCTCCAAGATATTTCACG+TGG - chr1_2:47568171-47568190 Msa0073710:five_prime_UTR 40.0%
CTCTCCAAGATATTTCACGT+GGG - chr1_2:47568172-47568191 Msa0073710:five_prime_UTR 40.0%
ACTTCCCACGTGAAATATCT+TGG + chr1_2:47568179-47568198 None:intergenic 40.0%
TTTCACGTGGTGAAAGATAG+TGG - chr1_2:47568211-47568230 Msa0073710:five_prime_UTR 40.0%
AGTTAAAAACCTAGGGAGGA+TGG + chr1_2:47568299-47568318 None:intergenic 40.0%
CAGAAGTTAAAAACCTAGGG+AGG + chr1_2:47568303-47568322 None:intergenic 40.0%
! TGTTTCTTTTGCCTGATGGT+AGG - chr1_2:47568367-47568386 Msa0073710:five_prime_UTR 40.0%
! TTTTGCCTGATGGTAGGAAT+TGG - chr1_2:47568373-47568392 Msa0073710:five_prime_UTR 40.0%
TTTGCCTGATGGTAGGAATT+GGG - chr1_2:47568374-47568393 Msa0073710:five_prime_UTR 40.0%
! GTCAGCAGAAAAGCATATAG+AGG + chr1_2:47568451-47568470 None:intergenic 40.0%
AAAGCAAGGTAGGCTGATTA+GGG + chr1_2:47568486-47568505 None:intergenic 40.0%
TAAAGCAAGGTAGGCTGATT+AGG + chr1_2:47568487-47568506 None:intergenic 40.0%
! ATCTGTTGGTATTGAGGATG+TGG - chr1_2:47568574-47568593 Msa0073710:five_prime_UTR 40.0%
! TCTGTTGGTATTGAGGATGT+GGG - chr1_2:47568575-47568594 Msa0073710:five_prime_UTR 40.0%
CTAGACAATGCACTTAGAAC+TGG - chr1_2:47568614-47568633 Msa0073710:five_prime_UTR 40.0%
CTGGGCCTCTGTAATTAATT+TGG - chr1_2:47568633-47568652 Msa0073710:five_prime_UTR 40.0%
AAAGCAAGGTAGGCTGATTA+GGG + chr1_2:47568486-47568505 None:intergenic 40.0%
TAAAGCAAGGTAGGCTGATT+AGG + chr1_2:47568487-47568506 None:intergenic 40.0%
! ATCTGTTGGTATTGAGGATG+TGG - chr1_2:47568574-47568593 Msa0073710:five_prime_UTR 40.0%
CTAGACAATGCACTTAGAAC+TGG - chr1_2:47568614-47568633 Msa0073710:five_prime_UTR 40.0%
!! AAGTATCGACCTTTGAGCAA+TGG - chr1_2:47568931-47568950 Msa0073710:five_prime_UTR 40.0%
!! AGTATCGACCTTTGAGCAAT+GGG - chr1_2:47568932-47568951 Msa0073710:five_prime_UTR 40.0%
TAGTTCATCCCATTGCTCAA+AGG + chr1_2:47568943-47568962 None:intergenic 40.0%
! ATAGGTACTGCTTGATCATG+GGG + chr1_2:47569273-47569292 None:intergenic 40.0%
! CAATAGGTACTGCTTGATCA+TGG + chr1_2:47569275-47569294 None:intergenic 40.0%
GATCAAGCAGTACCTATTGA+AGG - chr1_2:47569276-47569295 Msa0073710:five_prime_UTR 40.0%
AATCAGACAGGACCTTCAAT+AGG + chr1_2:47569291-47569310 None:intergenic 40.0%
AGTATACTTACCATGAGTGG+TGG - chr1_2:47569431-47569450 Msa0073710:five_prime_UTR 40.0%
GGAAGCCATGGTTATGGTTA+TGG + chr1_2:47563502-47563521 None:intergenic 45.0%
ATCATCGGAAGCCATGGTTA+TGG + chr1_2:47563508-47563527 None:intergenic 45.0%
GATTTCATCATCGGAAGCCA+TGG + chr1_2:47563514-47563533 None:intergenic 45.0%
GCAAGAAGAACGCAAGAAGA+TGG - chr1_2:47563542-47563561 Msa0073710:three_prime_UTR 45.0%
ACCTTCGACACAGATCTCTA+TGG - chr1_2:47563594-47563613 Msa0073710:three_prime_UTR 45.0%
AGAAACCTTCCGTCATACAC+CGG - chr1_2:47563702-47563721 Msa0073710:three_prime_UTR 45.0%
GTCATACACCGGTCATAACA+TGG - chr1_2:47563713-47563732 Msa0073710:three_prime_UTR 45.0%
GTCTCCGGTAATCATCTTCA+CGG + chr1_2:47563806-47563825 None:intergenic 45.0%
GTGAAGATGATTACCGGAGA+CGG - chr1_2:47563805-47563824 Msa0073710:three_prime_UTR 45.0%
TCTGATTCAATCTCCGTCTC+CGG + chr1_2:47563821-47563840 None:intergenic 45.0%
!! GCAAAAGCATCATGTCGATC+CGG + chr1_2:47563852-47563871 None:intergenic 45.0%
TAAGACCTAACAGACGGATC+CGG + chr1_2:47563891-47563910 None:intergenic 45.0%
!! TGAGAGATGAAGCGTTGAAG+AGG - chr1_2:47563922-47563941 Msa0073710:three_prime_UTR 45.0%
!! GAGAGATGAAGCGTTGAAGA+GGG - chr1_2:47563923-47563942 Msa0073710:three_prime_UTR 45.0%
GGGAGAGAGAGGAAACAATT+AGG - chr1_2:47563943-47563962 Msa0073710:three_prime_UTR 45.0%
AAGAAGGAAGAGGAAGAAGC+TGG - chr1_2:47563981-47564000 Msa0073710:three_prime_UTR 45.0%
AGCAGAATCAACAGCAGAAG+AGG - chr1_2:47564039-47564058 Msa0073710:exon 45.0%
AGAATCAACAGCAGAAGAGG+AGG - chr1_2:47564042-47564061 Msa0073710:exon 45.0%
AGCAGAAGAGGAGGAATAGA+TGG - chr1_2:47564051-47564070 Msa0073710:CDS 45.0%
GCAGAAGAGGAGGAATAGAT+GGG - chr1_2:47564052-47564071 Msa0073710:CDS 45.0%
GGATCAGAATCAGAATCAGG+AGG - chr1_2:47564073-47564092 Msa0073710:CDS 45.0%
CAGAATCAGAATCAGGAGGA+AGG - chr1_2:47564077-47564096 Msa0073710:CDS 45.0%
AATCAGAATCAGGAGGAAGG+TGG - chr1_2:47564080-47564099 Msa0073710:CDS 45.0%
!! GGTGTCATTGCATTCGAATC+AGG + chr1_2:47564140-47564159 None:intergenic 45.0%
GATTCGAATGCAATGACACC+GGG - chr1_2:47564140-47564159 Msa0073710:CDS 45.0%
ATTCGAATGCAATGACACCG+GGG - chr1_2:47564141-47564160 Msa0073710:CDS 45.0%
TTATTGATGCTACTCCTGGG+AGG - chr1_2:47564195-47564214 Msa0073710:CDS 45.0%
! GGTTGATTCTGATGCTACAC+CGG - chr1_2:47564256-47564275 Msa0073710:intron 45.0%
! GTTGATTCTGATGCTACACC+GGG - chr1_2:47564257-47564276 Msa0073710:intron 45.0%
GATGCTACTCCTAAGCTTAG+TGG - chr1_2:47564308-47564327 Msa0073710:intron 45.0%
CTACTCCTAAGCTTAGTGGT+GGG - chr1_2:47564312-47564331 Msa0073710:intron 45.0%
GTAATCCCACCACTAAGCTT+AGG + chr1_2:47564320-47564339 None:intergenic 45.0%
GATCTTTGTCTCTTCGGAGT+CGG + chr1_2:47564344-47564363 None:intergenic 45.0%
GGATGAAACACCTGCTACTA+TGG - chr1_2:47564370-47564389 Msa0073710:intron 45.0%
GTTACACTTCCCATAGTAGC+AGG + chr1_2:47564383-47564402 None:intergenic 45.0%
! GGAAGTGTAACTCCATTACC+TGG - chr1_2:47564392-47564411 Msa0073710:intron 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG - chr1_2:47564448-47564467 Msa0073710:intron 45.0%
CTAATCGGCACATAAGAAGC+TGG + chr1_2:47564629-47564648 None:intergenic 45.0%
!! CAGCTTCTTATGTGCCGATT+AGG - chr1_2:47564627-47564646 Msa0073710:intron 45.0%
TTCCTTGCAGGTGTCCTAAT+CGG + chr1_2:47564644-47564663 None:intergenic 45.0%
TGATAAAGTGGAGTCCCCAA+CGG + chr1_2:47564686-47564705 None:intergenic 45.0%
CAGATTCCTGAAGAGAATCG+TGG - chr1_2:47564704-47564723 Msa0073710:intron 45.0%
GATGTTCCTAAAGAAGCTCC+TGG - chr1_2:47564737-47564756 Msa0073710:intron 45.0%
AAACCACCAGGAGCTTCTTT+AGG + chr1_2:47564746-47564765 None:intergenic 45.0%
GAATGAAGAGGAGTTGTCTC+CGG - chr1_2:47564820-47564839 Msa0073710:intron 45.0%
TTCCTCTCTTTCTGCTCATC+CGG + chr1_2:47564842-47564861 None:intergenic 45.0%
! CTCAAAGCAGTTTTCCTCTG+CGG + chr1_2:47564905-47564924 None:intergenic 45.0%
GCATAAGCAACGGCAGTATT+CGG + chr1_2:47564976-47564995 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG - chr1_2:47564985-47565004 Msa0073710:intron 45.0%
ACTACTATGCCCGTGTTGAA+GGG - chr1_2:47565131-47565150 Msa0073710:intron 45.0%
TATTTCCCTCCCTTCAACAC+GGG + chr1_2:47565143-47565162 None:intergenic 45.0%
CTACTATGATTGCTGCCATG+AGG - chr1_2:47565194-47565213 Msa0073710:intron 45.0%
GTTATCTATGTCAGGCCTCA+TGG + chr1_2:47565212-47565231 None:intergenic 45.0%
TCCACAAGAGATCTCAGATG+GGG + chr1_2:47565418-47565437 None:intergenic 45.0%
GTGTTGAAGCCATTGTGGAA+GGG - chr1_2:47565553-47565572 Msa0073710:intron 45.0%
!! AGCCATTGTGGAAGGGTATT+AGG - chr1_2:47565560-47565579 Msa0073710:intron 45.0%
TGCCTAATACCCTTCCACAA+TGG + chr1_2:47565565-47565584 None:intergenic 45.0%
TATTAGGCAACACCGTGGTA+AGG - chr1_2:47565576-47565595 Msa0073710:intron 45.0%
!! AAACAGTGTGTGAGCACTGA+GGG - chr1_2:47565751-47565770 Msa0073710:five_prime_UTR 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG - chr1_2:47565818-47565837 Msa0073710:five_prime_UTR 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG - chr1_2:47565822-47565841 Msa0073710:five_prime_UTR 45.0%
GACGGTTGAGATAGCAAACA+AGG - chr1_2:47565882-47565901 Msa0073710:five_prime_UTR 45.0%
!! GTCGGTGTTGCTGATATTGT+TGG - chr1_2:47565904-47565923 Msa0073710:five_prime_UTR 45.0%
TGAGAAGGTGGTCACTAACT+TGG - chr1_2:47565990-47566009 Msa0073710:five_prime_UTR 45.0%
GAGAAGGTGGTCACTAACTT+GGG - chr1_2:47565991-47566010 Msa0073710:five_prime_UTR 45.0%
! ATCACTAGTCTGCTCTTGGA+AGG + chr1_2:47566073-47566092 None:intergenic 45.0%
! CATCATCACTAGTCTGCTCT+TGG + chr1_2:47566077-47566096 None:intergenic 45.0%
! ACAACAAGAGTGCAAAGGTG+AGG - chr1_2:47566199-47566218 Msa0073710:five_prime_UTR 45.0%
GTGCCATGAGGAACAATTGA+TGG - chr1_2:47566269-47566288 Msa0073710:five_prime_UTR 45.0%
GACCCATCAATTGTTCCTCA+TGG + chr1_2:47566275-47566294 None:intergenic 45.0%
!! GAAGAGTACCCAGAAGTTCT+AGG - chr1_2:47566327-47566346 Msa0073710:five_prime_UTR 45.0%
GAATAGGCATGAGAAAGTCC+AGG - chr1_2:47566452-47566471 Msa0073710:five_prime_UTR 45.0%
CAAGGTCAATACAGTTCTCC+TGG + chr1_2:47566473-47566492 None:intergenic 45.0%
! GGAGAACTGTATTGACCTTG+TGG - chr1_2:47566473-47566492 Msa0073710:five_prime_UTR 45.0%
! ACTGTATTGACCTTGTGGGT+AGG - chr1_2:47566478-47566497 Msa0073710:five_prime_UTR 45.0%
AGTTTGTACCTGCCAGAGAA+TGG - chr1_2:47566520-47566539 Msa0073710:five_prime_UTR 45.0%
ACAGATCCTCATCCATTCTC+TGG + chr1_2:47566535-47566554 None:intergenic 45.0%
GATGCTTAAGGCACACAAGA+AGG - chr1_2:47566569-47566588 Msa0073710:five_prime_UTR 45.0%
ATAATCTCAAGGTGCAGGAG+AGG - chr1_2:47566673-47566692 Msa0073710:five_prime_UTR 45.0%
AACAATAGCAATGGCCACAG+TGG + chr1_2:47566715-47566734 None:intergenic 45.0%
!! CAGTGCTGGCAAAATTGTGA+AGG + chr1_2:47566754-47566773 None:intergenic 45.0%
CGATACTCATTCATCAGTGC+TGG + chr1_2:47566768-47566787 None:intergenic 45.0%
! TGGACAGGGATTTGGTTCAT+AGG - chr1_2:47566910-47566929 Msa0073710:five_prime_UTR 45.0%
GCCAGACATAGTTCAGCAAA+TGG + chr1_2:47567007-47567026 None:intergenic 45.0%
! GCTGTGATGGAAGTCATTGA+AGG - chr1_2:47567062-47567081 Msa0073710:five_prime_UTR 45.0%
TGGAAGTCATTGAAGGGATG+AGG - chr1_2:47567069-47567088 Msa0073710:five_prime_UTR 45.0%
GGAAGTCATTGAAGGGATGA+GGG - chr1_2:47567070-47567089 Msa0073710:five_prime_UTR 45.0%
AAGAACAACAGCAGAACCCA+AGG + chr1_2:47567099-47567118 None:intergenic 45.0%
AGTACACCTCCCTAACTTTC+CGG + chr1_2:47567154-47567173 None:intergenic 45.0%
CTCTCTGTATATTGGAGCTC+AGG - chr1_2:47567187-47567206 Msa0073710:five_prime_UTR 45.0%
TGTGCTCATCCTCTAGTGAT+GGG + chr1_2:47567232-47567251 None:intergenic 45.0%
TTGTGCTCATCCTCTAGTGA+TGG + chr1_2:47567233-47567252 None:intergenic 45.0%
AACAATGTGGCGAAGGTTTG+CGG - chr1_2:47567513-47567532 Msa0073710:five_prime_UTR 45.0%
! TAGAGATAACTGGTGGGTGT+CGG + chr1_2:47567657-47567676 None:intergenic 45.0%
ATTCCGTTCAGTCCCAATGT+TGG + chr1_2:47567765-47567784 None:intergenic 45.0%
CGCAGACTGTCAACATCTAA+TGG - chr1_2:47567857-47567876 Msa0073710:five_prime_UTR 45.0%
TTAAATAGGAATGGCTGCCG+TGG + chr1_2:47568063-47568082 None:intergenic 45.0%
AGTAGATGTCGATGGACAGT+GGG + chr1_2:47568154-47568173 None:intergenic 45.0%
TCTTGGAGAGTAGATGTCGA+TGG + chr1_2:47568162-47568181 None:intergenic 45.0%
GTGACTCTTCAGCACTATAG+AGG - chr1_2:47568233-47568252 Msa0073710:five_prime_UTR 45.0%
! GGAGTACTTGCTAAGCCATT+TGG - chr1_2:47568254-47568273 Msa0073710:five_prime_UTR 45.0%
AAAAACCTAGGGAGGATGGT+AGG + chr1_2:47568295-47568314 None:intergenic 45.0%
AACTCCCAATTCCTACCATC+AGG + chr1_2:47568381-47568400 None:intergenic 45.0%
CGTGTGACATAAAGCAAGGT+AGG + chr1_2:47568496-47568515 None:intergenic 45.0%
CTAGCGTGTGACATAAAGCA+AGG + chr1_2:47568500-47568519 None:intergenic 45.0%
CGTGTGACATAAAGCAAGGT+AGG + chr1_2:47568496-47568515 None:intergenic 45.0%
CTAGCGTGTGACATAAAGCA+AGG + chr1_2:47568500-47568519 None:intergenic 45.0%
! TCCTAATTGTGGAGCATCTC+TGG - chr1_2:47569017-47569036 Msa0073710:five_prime_UTR 45.0%
ACCAGAGATGCTCCACAATT+AGG + chr1_2:47569021-47569040 None:intergenic 45.0%
!! GCCAGCATTGACTACCTAAA+CGG + chr1_2:47569188-47569207 None:intergenic 45.0%
TTTAGGTAGTCAATGCTGGC+TGG - chr1_2:47569188-47569207 Msa0073710:five_prime_UTR 45.0%
! GGCTGGCTCATAACTTCATA+AGG - chr1_2:47569205-47569224 Msa0073710:five_prime_UTR 45.0%
GCCATAGAGATCTGTGTCGA+AGG + chr1_2:47563598-47563617 None:intergenic 50.0%
! TATGACGGAAGGTTTCTGCG+AGG + chr1_2:47563699-47563718 None:intergenic 50.0%
! TATGACCGGTGTATGACGGA+AGG + chr1_2:47563710-47563729 None:intergenic 50.0%
CGGAACAGCCATGTTATGAC+CGG + chr1_2:47563724-47563743 None:intergenic 50.0%
! CGACATGATGCTTTTGCTGC+TGG - chr1_2:47563855-47563874 Msa0073710:three_prime_UTR 50.0%
GGAAGAGGAAGAAGCTGGTA+AGG - chr1_2:47563986-47564005 Msa0073710:three_prime_UTR 50.0%
GGAGGAAGGTGGTGTGAAAA+AGG - chr1_2:47564091-47564110 Msa0073710:CDS 50.0%
ATGCAATGACACCGGGGATA+TGG - chr1_2:47564147-47564166 Msa0073710:CDS 50.0%
TGCAATGACACCGGGGATAT+GGG - chr1_2:47564148-47564167 Msa0073710:CDS 50.0%
TCCTGGGAGGAGGAATAGAT+GGG - chr1_2:47564208-47564227 Msa0073710:intron 50.0%
TCAGAATCAACCAACCTCCC+CGG + chr1_2:47564248-47564267 None:intergenic 50.0%
GCTACTCCTAAGCTTAGTGG+TGG - chr1_2:47564311-47564330 Msa0073710:intron 50.0%
! ACACCTGCTGCTTATACACC+TGG - chr1_2:47564419-47564438 Msa0073710:intron 50.0%
ACACCAGGTGTATAAGCAGC+AGG + chr1_2:47564425-47564444 None:intergenic 50.0%
!! ACACCTGGTGTTACTCCTGT+TGG - chr1_2:47564434-47564453 Msa0073710:intron 50.0%
GCCAATTCAACACCACCAAC+AGG + chr1_2:47564452-47564471 None:intergenic 50.0%
GAATTGGCTACACCTACTCC+TGG - chr1_2:47564464-47564483 Msa0073710:intron 50.0%
CTACTCCTGGTGCTTTGCAA+GGG - chr1_2:47564477-47564496 Msa0073710:intron 50.0%
TTTGCAAGGGTCGTTTACGC+CGG - chr1_2:47564490-47564509 Msa0073710:intron 50.0%
GGGAGAGGGATATTGAAGAG+AGG - chr1_2:47564534-47564553 Msa0073710:intron 50.0%
TCGGCACATAAGAAGCTGGA+GGG + chr1_2:47564625-47564644 None:intergenic 50.0%
ATCGGCACATAAGAAGCTGG+AGG + chr1_2:47564626-47564645 None:intergenic 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG + chr1_2:47564656-47564675 None:intergenic 50.0%
TGCTGACCACGATTCTCTTC+AGG + chr1_2:47564713-47564732 None:intergenic 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG - chr1_2:47564740-47564759 Msa0073710:intron 50.0%
! AAAGCAGTTTTCCTCTGCGG+TGG + chr1_2:47564902-47564921 None:intergenic 50.0%
CGCAGAGGAAAACTGCTTTG+AGG - chr1_2:47564903-47564922 Msa0073710:intron 50.0%
!! AAGGCTCGTGAATTTGGTGC+TGG - chr1_2:47564938-47564957 Msa0073710:intron 50.0%
GCTTATGCAGCCTACTTTGG+AGG - chr1_2:47564988-47565007 Msa0073710:intron 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG + chr1_2:47565001-47565020 None:intergenic 50.0%
! CTACTTTGGAGGACCAAGAG+AGG - chr1_2:47564999-47565018 Msa0073710:intron 50.0%
!!! GGACCAAGAGAGGCATCTTT+TGG - chr1_2:47565009-47565028 Msa0073710:intron 50.0%
GACTACTATGCCCGTGTTGA+AGG - chr1_2:47565130-47565149 Msa0073710:intron 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG - chr1_2:47565171-47565190 Msa0073710:intron 50.0%
! AGTGTCGTTGCATCTGCTCT+CGG - chr1_2:47565271-47565290 Msa0073710:intron 50.0%
TGACAGACGGCCTTCAAGAA+GGG + chr1_2:47565313-47565332 None:intergenic 50.0%
!! ACTCGGTGTTGAAGCCATTG+TGG - chr1_2:47565548-47565567 Msa0073710:intron 50.0%
! GGTGTTGAAGCCATTGTGGA+AGG - chr1_2:47565552-47565571 Msa0073710:intron 50.0%
!! AAGGGTATTAGGCAACACCG+TGG - chr1_2:47565571-47565590 Msa0073710:intron 50.0%
! GAAACAGTGTGTGAGCACTG+AGG - chr1_2:47565750-47565769 Msa0073710:five_prime_UTR 50.0%
CAAGCAACTTGTGGAGACGA+CGG - chr1_2:47565864-47565883 Msa0073710:five_prime_UTR 50.0%
GAGTGAACCTTACAGGCGAA+TGG - chr1_2:47565954-47565973 Msa0073710:five_prime_UTR 50.0%
ACCTTACAGGCGAATGGTCA+TGG - chr1_2:47565960-47565979 Msa0073710:five_prime_UTR 50.0%
TCCATGACCATTCGCCTGTA+AGG + chr1_2:47565964-47565983 None:intergenic 50.0%
TGTCATGAAGCAGTGCCATG+AGG - chr1_2:47566257-47566276 Msa0073710:five_prime_UTR 50.0%
GATCAGCAATCCTACCCACA+AGG + chr1_2:47566491-47566510 None:intergenic 50.0%
TACCTGCCAGAGAATGGATG+AGG - chr1_2:47566526-47566545 Msa0073710:five_prime_UTR 50.0%
ATCCTCATCCATTCTCTGGC+AGG + chr1_2:47566531-47566550 None:intergenic 50.0%
TGCTGTGACTCCTTTGCTTG+AGG - chr1_2:47566878-47566897 Msa0073710:five_prime_UTR 50.0%
!! ATGAGAGCGTCCTCAAGCAA+AGG + chr1_2:47566891-47566910 None:intergenic 50.0%
TTTGCTTGAGGACGCTCTCA+TGG - chr1_2:47566890-47566909 Msa0073710:five_prime_UTR 50.0%
GTACACCTCCCTAACTTTCC+GGG + chr1_2:47567153-47567172 None:intergenic 50.0%
! GGAAAGTTAGGGAGGTGTAC+TGG - chr1_2:47567153-47567172 Msa0073710:five_prime_UTR 50.0%
TGCAGCATACCCATCACTAG+AGG - chr1_2:47567220-47567239 Msa0073710:five_prime_UTR 50.0%
GACAGTCTGCGACTAAGTCA+AGG + chr1_2:47567848-47567867 None:intergenic 50.0%
GTGATCGATTGCATGCTTGG+AGG + chr1_2:47567988-47568007 None:intergenic 50.0%
TCGATGGACAGTGGGTACTT+GGG + chr1_2:47568146-47568165 None:intergenic 50.0%
GAGTAGATGTCGATGGACAG+TGG + chr1_2:47568155-47568174 None:intergenic 50.0%
TATAGCCTACCATCCTCCCT+AGG - chr1_2:47568287-47568306 Msa0073710:five_prime_UTR 50.0%
CTGTTAAACCTCTGGTCTCG+CGG + chr1_2:47568538-47568557 None:intergenic 50.0%
CTGTTAAACCTCTGGTCTCG+CGG + chr1_2:47568538-47568557 None:intergenic 50.0%
GCCGTTTAGGTAGTCAATGC+TGG - chr1_2:47569184-47569203 Msa0073710:five_prime_UTR 50.0%
! TACCATGAGTGGTGGTTCTG+TGG - chr1_2:47569439-47569458 Msa0073710:five_prime_UTR 50.0%
! ACCATGAGTGGTGGTTCTGT+GGG - chr1_2:47569440-47569459 Msa0073710:five_prime_UTR 50.0%
TGCTGCTGGTGAGAAAACGC+CGG - chr1_2:47563869-47563888 Msa0073710:three_prime_UTR 55.0%
AAACGCCGGATCCGTCTGTT+AGG - chr1_2:47563883-47563902 Msa0073710:three_prime_UTR 55.0%
! AGCGTTGAAGAGGGAGAGAG+AGG - chr1_2:47563932-47563951 Msa0073710:three_prime_UTR 55.0%
AGAAGCTGGTAAGGTTGCGC+CGG - chr1_2:47563995-47564014 Msa0073710:three_prime_UTR 55.0%
GGTGTAGCATCCCATATCCC+CGG + chr1_2:47564161-47564180 None:intergenic 55.0%
TTGATGCTACTCCTGGGAGG+AGG - chr1_2:47564198-47564217 Msa0073710:CDS 55.0%
CTCCTGGGAGGAGGAATAGA+TGG - chr1_2:47564207-47564226 Msa0073710:intron 55.0%
TCCCATCTATTCCTCCTCCC+AGG + chr1_2:47564212-47564231 None:intergenic 55.0%
GATTCTGATGCTACACCGGG+TGG - chr1_2:47564260-47564279 Msa0073710:intron 55.0%
!! TAACGCCTGGTGGTGCTACT+TGG - chr1_2:47564285-47564304 Msa0073710:intron 55.0%
!! AACGCCTGGTGGTGCTACTT+GGG - chr1_2:47564286-47564305 Msa0073710:intron 55.0%
GCAGGTGTAGCACCAGGTAA+TGG + chr1_2:47564407-47564426 None:intergenic 55.0%
TAAGCAGCAGGTGTAGCACC+AGG + chr1_2:47564413-47564432 None:intergenic 55.0%
CCACCAACAGGAGTAACACC+AGG + chr1_2:47564440-47564459 None:intergenic 55.0%
!! CCTGGTGTTACTCCTGTTGG+TGG - chr1_2:47564437-47564456 Msa0073710:intron 55.0%
! CCTTGCAAAGCACCAGGAGT+AGG + chr1_2:47564479-47564498 None:intergenic 55.0%
CCTACTCCTGGTGCTTTGCA+AGG - chr1_2:47564476-47564495 Msa0073710:intron 55.0%
! AACGACCCTTGCAAAGCACC+AGG + chr1_2:47564485-47564504 None:intergenic 55.0%
! TGCCGATTAGGACACCTGCA+AGG - chr1_2:47564639-47564658 Msa0073710:intron 55.0%
TCTTGCTACACCTACGCCGT+TGG - chr1_2:47564667-47564686 Msa0073710:intron 55.0%
CTTGCTACACCTACGCCGTT+GGG - chr1_2:47564668-47564687 Msa0073710:intron 55.0%
TTGCTACACCTACGCCGTTG+GGG - chr1_2:47564669-47564688 Msa0073710:intron 55.0%
CTCCGGATGAGCAGAAAGAG+AGG - chr1_2:47564837-47564856 Msa0073710:intron 55.0%
ACTATGCCCGTGTTGAAGGG+AGG - chr1_2:47565134-47565153 Msa0073710:intron 55.0%
CTATGCCCGTGTTGAAGGGA+GGG - chr1_2:47565135-47565154 Msa0073710:intron 55.0%
CTGACAGACGGCCTTCAAGA+AGG + chr1_2:47565314-47565333 None:intergenic 55.0%
! GCCCCATCTGAGATCTCTTG+TGG - chr1_2:47565414-47565433 Msa0073710:intron 55.0%
AGCAGCAGCTTCAGCAAGTG+CGG + chr1_2:47565506-47565525 None:intergenic 55.0%
GCTGAAGCTGCTGCTCCTTA+TGG - chr1_2:47565511-47565530 Msa0073710:intron 55.0%
GCAACACCGTGGTAAGGTGT+TGG - chr1_2:47565582-47565601 Msa0073710:intron 55.0%
ACGCAGCCAACACCTTACCA+CGG + chr1_2:47565591-47565610 None:intergenic 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG - chr1_2:47565828-47565847 Msa0073710:five_prime_UTR 55.0%
GGCGCAGTTGTAAACTCGCT+CGG - chr1_2:47566120-47566139 Msa0073710:five_prime_UTR 55.0%
GCGCAGTTGTAAACTCGCTC+GGG - chr1_2:47566121-47566140 Msa0073710:five_prime_UTR 55.0%
GTGGGTAGGATTGCTGATCG+TGG - chr1_2:47566492-47566511 Msa0073710:five_prime_UTR 55.0%
TGCGAAAGCCATTGGACCAC+AGG - chr1_2:47566629-47566648 Msa0073710:five_prime_UTR 55.0%
CAGGACATCCTGTGGTCCAA+TGG + chr1_2:47566640-47566659 None:intergenic 55.0%
CATTGGACCACAGGATGTCC+TGG - chr1_2:47566638-47566657 Msa0073710:five_prime_UTR 55.0%
AGAGTTGCCAGGACATCCTG+TGG + chr1_2:47566648-47566667 None:intergenic 55.0%
GAATCGTGTGTGCACCACTG+TGG - chr1_2:47566698-47566717 Msa0073710:five_prime_UTR 55.0%
TTGAGGACGCTCTCATGGAC+AGG - chr1_2:47566895-47566914 Msa0073710:five_prime_UTR 55.0%
TGAGGACGCTCTCATGGACA+GGG - chr1_2:47566896-47566915 Msa0073710:five_prime_UTR 55.0%
CGCTCTCATGGACAGGGATT+TGG - chr1_2:47566902-47566921 Msa0073710:five_prime_UTR 55.0%
TGCATCTGCCGTGAAGCACA+TGG - chr1_2:47566941-47566960 Msa0073710:five_prime_UTR 55.0%
TCCCAGTGCCATGTGCTTCA+CGG + chr1_2:47566952-47566971 None:intergenic 55.0%
TGAAGGGATGAGGGTAGCCT+TGG - chr1_2:47567079-47567098 Msa0073710:five_prime_UTR 55.0%
GAAGGGATGAGGGTAGCCTT+GGG - chr1_2:47567080-47567099 Msa0073710:five_prime_UTR 55.0%
GTCGATGGACAGTGGGTACT+TGG + chr1_2:47568147-47568166 None:intergenic 55.0%
ACCCACAGAACCACCACTCA+TGG + chr1_2:47569444-47569463 None:intergenic 55.0%
TGGTAAGGTTGCGCCGGAGA+AGG - chr1_2:47564001-47564020 Msa0073710:three_prime_UTR 60.0%
!! TGGGATGCTACACCGACTCC+TGG - chr1_2:47564167-47564186 Msa0073710:CDS 60.0%
ATGGGATGAGACACCGACGC+CGG - chr1_2:47564226-47564245 Msa0073710:intron 60.0%
GCATCCCAAGTAGCACCACC+AGG + chr1_2:47564293-47564312 None:intergenic 60.0%
TCTTGGCAAGCTCGGCACAC+CGG - chr1_2:47565343-47565362 Msa0073710:intron 60.0%
!! GTGTGTGAGCACTGAGGGTG+TGG - chr1_2:47565756-47565775 Msa0073710:five_prime_UTR 60.0%
TGCCGTGAAGCACATGGCAC+TGG - chr1_2:47566947-47566966 Msa0073710:five_prime_UTR 60.0%
GCCGTGAAGCACATGGCACT+GGG - chr1_2:47566948-47566967 Msa0073710:five_prime_UTR 60.0%
! GAAGCACATGGCACTGGGAG+TGG - chr1_2:47566953-47566972 Msa0073710:five_prime_UTR 60.0%
!! GCACTGGGAGTGGCTGGTTT+GGG - chr1_2:47566963-47566982 Msa0073710:five_prime_UTR 60.0%
!! AGTGGCTGGTTTGGGTTGCG+AGG - chr1_2:47566971-47566990 Msa0073710:five_prime_UTR 60.0%
!! TTTGGGTTGCGAGGATGCGC+TGG - chr1_2:47566980-47566999 Msa0073710:five_prime_UTR 60.0%
AAGGACTGTTCCACCCTGCC+CGG - chr1_2:47567132-47567151 Msa0073710:five_prime_UTR 60.0%
TCCACCCTGCCCGGAAAGTT+AGG - chr1_2:47567141-47567160 Msa0073710:five_prime_UTR 60.0%
CCACCCTGCCCGGAAAGTTA+GGG - chr1_2:47567142-47567161 Msa0073710:five_prime_UTR 60.0%
CCTCCCTAACTTTCCGGGCA+GGG + chr1_2:47567148-47567167 None:intergenic 60.0%
ACCTCCCTAACTTTCCGGGC+AGG + chr1_2:47567149-47567168 None:intergenic 60.0%
!!! GGCTGCCGTGGTTTTGTGCA+TGG + chr1_2:47568051-47568070 None:intergenic 60.0%
TGGGATGAGACACCGACGCC+GGG - chr1_2:47564227-47564246 Msa0073710:intron 65.0%
TCAACCAACCTCCCCGGCGT+CGG + chr1_2:47564242-47564261 None:intergenic 65.0%
ACACCGGGTGGTGTAACGCC+TGG - chr1_2:47564272-47564291 Msa0073710:intron 65.0%
CCACCAGGCGTTACACCACC+CGG + chr1_2:47564278-47564297 None:intergenic 65.0%
AGTGGAGTCCCCAACGGCGT+AGG + chr1_2:47564680-47564699 None:intergenic 65.0%
CTTGGCAAGCTCGGCACACC+GGG - chr1_2:47565344-47565363 Msa0073710:intron 65.0%
! CACATGGCACTGGGAGTGGC+TGG - chr1_2:47566957-47566976 Msa0073710:five_prime_UTR 65.0%
! GGCACTGGGAGTGGCTGGTT+TGG - chr1_2:47566962-47566981 Msa0073710:five_prime_UTR 65.0%
GGGCAGGGTGGAACAGTCCT+TGG + chr1_2:47567133-47567152 None:intergenic 65.0%
CCCTAACTTTCCGGGCAGGG+TGG + chr1_2:47567145-47567164 None:intergenic 65.0%
CCCTGCCCGGAAAGTTAGGG+AGG - chr1_2:47567145-47567164 Msa0073710:five_prime_UTR 65.0%
GGGATGAGACACCGACGCCG+GGG - chr1_2:47564228-47564247 Msa0073710:intron 70.0%
ATGAGACACCGACGCCGGGG+AGG - chr1_2:47564231-47564250 Msa0073710:intron 70.0%
CCGGGTGGTGTAACGCCTGG+TGG - chr1_2:47564275-47564294 Msa0073710:intron 70.0%
AGAACGGCACGCCACCGCAG+AGG - chr1_2:47564888-47564907 Msa0073710:intron 70.0%
! CTGGTCTCGCGGACTGCAGC+AGG + chr1_2:47568527-47568546 None:intergenic 70.0%
GCTGCAGTCCGCGAGACCAG+AGG - chr1_2:47568527-47568546 Msa0073710:five_prime_UTR 70.0%
! CTGGTCTCGCGGACTGCAGC+AGG + chr1_2:47568527-47568546 None:intergenic 70.0%
GCTGCAGTCCGCGAGACCAG+AGG - chr1_2:47568527-47568546 Msa0073710:five_prime_UTR 70.0%
GACACCGACGCCGGGGAGGT+TGG - chr1_2:47564235-47564254 Msa0073710:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 47563410 47569559 47563410 ID=Msa0073710;Name=Msa0073710
chr1_2 mRNA 47563410 47569559 47563410 ID=Msa0073710-mRNA-1;Parent=Msa0073710;Name=Msa0073710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=3896|0|0.66|1|0.5|0.33|3|637|66
chr1_2 exon 47563410 47564222 47563410 ID=Msa0073710-mRNA-1:exon:14492;Parent=Msa0073710-mRNA-1
chr1_2 exon 47564661 47564677 47564661 ID=Msa0073710-mRNA-1:exon:14491;Parent=Msa0073710-mRNA-1
chr1_2 exon 47565656 47569559 47565656 ID=Msa0073710-mRNA-1:exon:14490;Parent=Msa0073710-mRNA-1
chr1_2 five_prime_UTR 47565664 47569559 47565664 ID=Msa0073710-mRNA-1:five_prime_utr;Parent=Msa0073710-mRNA-1
chr1_2 CDS 47565656 47565663 47565656 ID=Msa0073710-mRNA-1:cds;Parent=Msa0073710-mRNA-1
chr1_2 CDS 47564661 47564677 47564661 ID=Msa0073710-mRNA-1:cds;Parent=Msa0073710-mRNA-1
chr1_2 CDS 47564047 47564222 47564047 ID=Msa0073710-mRNA-1:cds;Parent=Msa0073710-mRNA-1
chr1_2 three_prime_UTR 47563410 47564046 47563410 ID=Msa0073710-mRNA-1:three_prime_utr;Parent=Msa0073710-mRNA-1
Gene Sequence

>Msa0073710

ATGTATTGCCTACCATCCTCCCTAGGGAGTGTAAAATCCCTAATCAGCCTACCTTGCTTTATGTCACACGCTAGCATACCTGCTGCAGTCCGCGAGACCAGAGGTTTAACAGAAGATCTTGTTCGTATATCTGTTGGTATTGAGGATGTGGATGATCTGATTGCTGATCTAGACAATGCACTTAGAACTGGGCCTCTGTAA
Protein sequence

>Msa0073710

MYCLPSSLGSVKSLISLPCFMSHASIPAAVRETRGLTEDLVRISVGIEDVDDLIADLDNALRTGPL*