Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080980 | G7IAB3 | 61.029 | 136 | 31 | 4 | 2 | 123 | 18 | 145 | 2.27e-41 | 147 |
| Msa0080980 | G7IAB3 | 83.784 | 74 | 11 | 1 | 150 | 222 | 18 | 91 | 2.03e-33 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0080980 | Msa0747990 | 0.811760 | 5.957573e-51 | -8.615850e-47 |
| Msa0080980 | Msa0878220 | 0.805231 | 1.474905e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080980 | MtrunA17_Chr1g0193291 | 92.958 | 71 | 5 | 0 | 152 | 222 | 19 | 89 | 4.09e-43 | 140 |
| Msa0080980 | MtrunA17_Chr1g0193291 | 81.013 | 79 | 7 | 1 | 4 | 82 | 19 | 89 | 1.09e-37 | 126 |
| Msa0080980 | MtrunA17_Chr1g0193291 | 55.172 | 58 | 22 | 2 | 85 | 138 | 23 | 80 | 8.18e-12 | 59.3 |
| Msa0080980 | MtrunA17_Chr1g0193301 | 83.951 | 81 | 6 | 1 | 2 | 82 | 19 | 92 | 4.20e-42 | 137 |
| Msa0080980 | MtrunA17_Chr1g0193301 | 85.135 | 74 | 10 | 1 | 150 | 222 | 19 | 92 | 1.29e-38 | 129 |
| Msa0080980 | MtrunA17_Chr1g0193301 | 54.237 | 59 | 22 | 2 | 85 | 138 | 25 | 83 | 4.01e-12 | 60.5 |
| Msa0080980 | MtrunA17_Chr1g0193231 | 83.951 | 81 | 6 | 1 | 2 | 82 | 18 | 91 | 4.50e-42 | 137 |
| Msa0080980 | MtrunA17_Chr1g0193231 | 85.135 | 74 | 10 | 1 | 150 | 222 | 18 | 91 | 1.47e-38 | 129 |
| Msa0080980 | MtrunA17_Chr1g0193231 | 54.237 | 59 | 22 | 2 | 85 | 138 | 24 | 82 | 3.67e-12 | 60.5 |
| Msa0080980 | MtrunA17_Chr1g0193261 | 83.951 | 81 | 6 | 1 | 2 | 82 | 18 | 91 | 5.24e-42 | 137 |
| Msa0080980 | MtrunA17_Chr1g0193261 | 85.135 | 74 | 10 | 1 | 150 | 222 | 18 | 91 | 1.71e-38 | 128 |
| Msa0080980 | MtrunA17_Chr1g0193261 | 54.237 | 59 | 22 | 2 | 85 | 138 | 24 | 82 | 3.38e-12 | 60.5 |
| Msa0080980 | MtrunA17_Chr1g0193271 | 86.667 | 60 | 8 | 0 | 82 | 141 | 19 | 78 | 3.06e-32 | 112 |
| Msa0080980 | MtrunA17_Chr1g0193271 | 52.439 | 82 | 33 | 4 | 139 | 220 | 6 | 81 | 9.27e-17 | 72.4 |
| Msa0080980 | MtrunA17_Chr1g0193271 | 50.000 | 80 | 26 | 4 | 1 | 80 | 16 | 81 | 3.37e-14 | 65.5 |
| Msa0080980 | MtrunA17_Chr1g0193251 | 87.719 | 57 | 7 | 0 | 85 | 141 | 22 | 78 | 1.20e-30 | 108 |
| Msa0080980 | MtrunA17_Chr1g0193251 | 53.846 | 65 | 25 | 3 | 156 | 220 | 22 | 81 | 2.50e-13 | 63.5 |
| Msa0080980 | MtrunA17_Chr1g0193251 | 57.143 | 56 | 20 | 2 | 25 | 80 | 30 | 81 | 1.90e-12 | 61.2 |
| Msa0080980 | MtrunA17_Chr7g0271321 | 62.500 | 80 | 25 | 2 | 141 | 219 | 7 | 82 | 4.45e-26 | 96.7 |
| Msa0080980 | MtrunA17_Chr7g0271321 | 55.696 | 79 | 24 | 1 | 1 | 79 | 15 | 82 | 6.44e-22 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 536 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCTCTCCGGTTAATAT+TGG | 0.222586 | 1_2:-59416608 | None:intergenic |
| TGATGAAGATAGAGGTAGTT+GGG | 0.344602 | 1_2:+59421157 | Msa0080980:CDS |
| GCGATGAAGACAAAGGTAAC+TGG | 0.350780 | 1_2:+59416572 | Msa0080980:CDS |
| TCAGCTCTCCGGTTAATATT+GGG | 0.369784 | 1_2:-59416607 | None:intergenic |
| AGTCTTCTAAATCATCATTC+AGG | 0.386784 | 1_2:+59421039 | Msa0080980:intron |
| GGAGGGTATTATTATGATAA+TGG | 0.388759 | 1_2:+59412196 | Msa0080980:CDS |
| GTAGCTCTCATGTCAATAAC+AGG | 0.408831 | 1_2:-59412280 | None:intergenic |
| GTAGCTCTCATGTCAATAAC+AGG | 0.408831 | 1_2:-59421191 | None:intergenic |
| TGATGAAGACAGAGGCAGTT+GGG | 0.418711 | 1_2:+59412246 | Msa0080980:CDS |
| AGATGCGATTCTTGTATTTG+CGG | 0.423338 | 1_2:-59416639 | None:intergenic |
| CTGCCTCTGTCTTCATCACT+TGG | 0.423392 | 1_2:-59412241 | None:intergenic |
| CAGGGTACTATGATGATTGC+GGG | 0.442898 | 1_2:+59416533 | Msa0080980:CDS |
| TGGATCAACTTGATAGCGTT+CGG | 0.447892 | 1_2:-59416668 | None:intergenic |
| TTACCTTTGTCTTCATCGCT+AGG | 0.455729 | 1_2:-59416568 | None:intergenic |
| AAGCAAAGAGGAGGAGGAGG+AGG | 0.462286 | 1_2:+59412160 | Msa0080980:CDS |
| TTGCTGAGCCCAATATTAAC+CGG | 0.474804 | 1_2:+59416599 | Msa0080980:CDS |
| TTTCTGAATCTGAAATTCAC+TGG | 0.475847 | 1_2:+59412332 | Msa0080980:CDS |
| GTTCCTATATCCTACTGATC+AGG | 0.494135 | 1_2:-59412364 | None:intergenic |
| TTTCTGAATCTGAAATTCAC+TGG | 0.499455 | 1_2:+59421243 | Msa0080980:CDS |
| CTACCTCTATCTTCATCACT+TGG | 0.508941 | 1_2:-59421152 | None:intergenic |
| AGTAACAAGCAAAGAGGTGG+AGG | 0.512782 | 1_2:+59421089 | Msa0080980:CDS |
| GGATGAAATCTTCAGCTCTC+CGG | 0.514400 | 1_2:-59416618 | None:intergenic |
| CGATGAAGACAAAGGTAACT+GGG | 0.515593 | 1_2:+59416573 | Msa0080980:CDS |
| AGTAACAAGCAAAGAGGAGG+AGG | 0.517969 | 1_2:+59412154 | Msa0080980:CDS |
| AACAAGCAAAGAGGAGGAGG+AGG | 0.525171 | 1_2:+59412157 | Msa0080980:CDS |
| GTGATGAAGATAGAGGTAGT+TGG | 0.534465 | 1_2:+59421156 | Msa0080980:CDS |
| GGAGGAGAGTATTATGATCA+TGG | 0.541749 | 1_2:+59421107 | Msa0080980:CDS |
| ATGATTGCGGGCACAAGACA+TGG | 0.550797 | 1_2:+59416545 | Msa0080980:CDS |
| TTGTTCGTATCCTACTGCTC+AGG | 0.553904 | 1_2:-59421275 | None:intergenic |
| GTGATGAAGACAGAGGCAGT+TGG | 0.578210 | 1_2:+59412245 | Msa0080980:CDS |
| TGGCCAAGTGATGAAGATAG+AGG | 0.579214 | 1_2:+59421149 | Msa0080980:CDS |
| AGCAGTAACAAGCAAAGAGG+TGG | 0.595597 | 1_2:+59421086 | Msa0080980:CDS |
| GATGAAGACAGAGGCAGTTG+GGG | 0.597931 | 1_2:+59412247 | Msa0080980:CDS |
| GATGAAGATAGAGGTAGTTG+GGG | 0.608901 | 1_2:+59421158 | Msa0080980:CDS |
| TCAGGGTACTATGATGATTG+CGG | 0.611787 | 1_2:+59416532 | Msa0080980:CDS |
| TCTAGTAGTAACAAGCAAAG+AGG | 0.622478 | 1_2:+59412148 | Msa0080980:CDS |
| AGTAGTAACAAGCAAAGAGG+AGG | 0.624019 | 1_2:+59412151 | Msa0080980:CDS |
| TCTAGCAGTAACAAGCAAAG+AGG | 0.646145 | 1_2:+59421083 | Msa0080980:CDS |
| TGGCCTAGCGATGAAGACAA+AGG | 0.679527 | 1_2:+59416565 | Msa0080980:CDS |
| TGGCCAAGTGATGAAGACAG+AGG | 0.693322 | 1_2:+59412238 | Msa0080980:CDS |
| GTGCTTATGCTAACAAAGTG+TGG | 0.723534 | 1_2:+59421129 | Msa0080980:CDS |
| GTGCATATGATAACAAAGTG+TGG | 0.728033 | 1_2:+59412218 | Msa0080980:CDS |
| GATGAAGACAAAGGTAACTG+GGG | 0.739466 | 1_2:+59416574 | Msa0080980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTTTGATTTTTGAA+AGG | - | chr1_2:59413107-59413126 | None:intergenic | 10.0% |
| !! | ATAACAAATTATAAATTAGA+AGG | - | chr1_2:59413453-59413472 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAAATCCAAT+GGG | - | chr1_2:59413960-59413979 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAAAAAATCCAA+TGG | - | chr1_2:59413961-59413980 | None:intergenic | 10.0% |
| !! | ACATTTAATAATTGAATTAT+GGG | - | chr1_2:59414510-59414529 | None:intergenic | 10.0% |
| !! | TACATTTAATAATTGAATTA+TGG | - | chr1_2:59414511-59414530 | None:intergenic | 10.0% |
| !! | GTAATATGATAAAAATAATT+AGG | + | chr1_2:59414665-59414684 | Msa0080980:intron | 10.0% |
| !! | TCATATATTATATTACATAA+AGG | - | chr1_2:59416929-59416948 | None:intergenic | 10.0% |
| !! | GAAATTTAAATGTAAATTAA+TGG | + | chr1_2:59417097-59417116 | Msa0080980:intron | 10.0% |
| !! | TTTATTTATTACAATAAGAA+CGG | - | chr1_2:59417906-59417925 | None:intergenic | 10.0% |
| !!! | AAGTACTTTTAAAAAATAAT+CGG | - | chr1_2:59419989-59420008 | None:intergenic | 10.0% |
| !!! | ATTGATATTTTTCAATTTAA+GGG | - | chr1_2:59420529-59420548 | None:intergenic | 10.0% |
| !!! | TTAATCTTAACTTTTATCTA+CGG | + | chr1_2:59412815-59412834 | Msa0080980:intron | 15.0% |
| !!! | TTAGCTTTTTGATTTTTTAA+GGG | - | chr1_2:59412892-59412911 | None:intergenic | 15.0% |
| !! | AAGGAAAAAAAAAAAAGATA+CGG | - | chr1_2:59413088-59413107 | None:intergenic | 15.0% |
| !! | ATACAAATAATAGGAAATAA+TGG | + | chr1_2:59413598-59413617 | Msa0080980:intron | 15.0% |
| !!! | AAAAAAATTGTATTTTTTGG+CGG | + | chr1_2:59413724-59413743 | Msa0080980:intron | 15.0% |
| !! | AAAAAAAAAAAAATCCAATG+GGG | - | chr1_2:59413959-59413978 | None:intergenic | 15.0% |
| !!! | AACTTTTGCAAAAAAAAATA+GGG | - | chr1_2:59414769-59414788 | None:intergenic | 15.0% |
| !!! | TAGTTTTTATAATAAGACTT+GGG | - | chr1_2:59415109-59415128 | None:intergenic | 15.0% |
| !!! | TTAATTGTTGTTTTTAAAGT+TGG | + | chr1_2:59415434-59415453 | Msa0080980:intron | 15.0% |
| !!! | TAATTGTTGTTTTTAAAGTT+GGG | + | chr1_2:59415435-59415454 | Msa0080980:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr1_2:59415922-59415941 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr1_2:59415921-59415940 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr1_2:59415830-59415849 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr1_2:59415730-59415749 | Msa0080980:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr1_2:59415921-59415940 | Msa0080980:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr1_2:59415922-59415941 | Msa0080980:intron | 15.0% |
| !! | ATGTTACATAAAACTTTAAA+GGG | - | chr1_2:59415996-59416015 | None:intergenic | 15.0% |
| !! | AATGTTACATAAAACTTTAA+AGG | - | chr1_2:59415997-59416016 | None:intergenic | 15.0% |
| !! | TTCATGTTAGTTATATTATT+GGG | - | chr1_2:59416115-59416134 | None:intergenic | 15.0% |
| !! | ATTCATGTTAGTTATATTAT+TGG | - | chr1_2:59416116-59416135 | None:intergenic | 15.0% |
| !!! | ATATAATCCTTATTTATTCT+AGG | - | chr1_2:59416698-59416717 | None:intergenic | 15.0% |
| !!! | TATTAGTTTTTTTTTTTTGG+TGG | - | chr1_2:59416846-59416865 | None:intergenic | 15.0% |
| !! | AATTCGAACAAATTATATAT+TGG | - | chr1_2:59417152-59417171 | None:intergenic | 15.0% |
| !!! | TTTGATTTTAATTAAGGAAA+TGG | - | chr1_2:59418136-59418155 | None:intergenic | 15.0% |
| !! | CTTATAAATTTGTGTTTAAA+AGG | + | chr1_2:59418244-59418263 | Msa0080980:intron | 15.0% |
| !! | AACAAAAAAATATTGATAGA+GGG | - | chr1_2:59420214-59420233 | None:intergenic | 15.0% |
| !! | TAACAAAAAAATATTGATAG+AGG | - | chr1_2:59420215-59420234 | None:intergenic | 15.0% |
| !! | AAGTATAAGAAAATGAAAAA+TGG | + | chr1_2:59420421-59420440 | Msa0080980:intron | 15.0% |
| !!! | GATTGATATTTTTCAATTTA+AGG | - | chr1_2:59420530-59420549 | None:intergenic | 15.0% |
| !!! | GACAATATATATGTTTTTAT+TGG | + | chr1_2:59420629-59420648 | Msa0080980:intron | 15.0% |
| !! | TACAAACAAATTAAAATGGA+TGG | - | chr1_2:59412406-59412425 | None:intergenic | 20.0% |
| !! | TACGTACAAACAAATTAAAA+TGG | - | chr1_2:59412410-59412429 | None:intergenic | 20.0% |
| !! | CATATTAACATTACTAATTG+TGG | - | chr1_2:59412471-59412490 | None:intergenic | 20.0% |
| !! | ACTAAATTAGATTATGTTGT+TGG | - | chr1_2:59412535-59412554 | None:intergenic | 20.0% |
| !! | AAAAATAAGTAACTCACTAA+TGG | - | chr1_2:59412581-59412600 | None:intergenic | 20.0% |
| !!! | CTTAGCTTTTTGATTTTTTA+AGG | - | chr1_2:59412893-59412912 | None:intergenic | 20.0% |
| !! | AGGAAAAAAAAAAAAGATAC+GGG | - | chr1_2:59413087-59413106 | None:intergenic | 20.0% |
| !!! | TTTTCATATAATTGGTTACT+AGG | - | chr1_2:59413538-59413557 | None:intergenic | 20.0% |
| !!! | TACAACTGTTTTCATATAAT+TGG | - | chr1_2:59413546-59413565 | None:intergenic | 20.0% |
| !! | CTAAAAGATGTTGTATTATA+GGG | - | chr1_2:59413631-59413650 | None:intergenic | 20.0% |
| !! | TCTAAAAGATGTTGTATTAT+AGG | - | chr1_2:59413632-59413651 | None:intergenic | 20.0% |
| !!! | ATAATACAACATCTTTTAGA+TGG | + | chr1_2:59413632-59413651 | Msa0080980:intron | 20.0% |
| !!! | AAAAAATTGTATTTTTTGGC+GGG | + | chr1_2:59413725-59413744 | Msa0080980:intron | 20.0% |
| !! | TTTAAATGTGTCTATTAGTT+TGG | + | chr1_2:59413976-59413995 | Msa0080980:intron | 20.0% |
| !!! | TGTGATTTTCTTTAACAAAA+TGG | - | chr1_2:59414023-59414042 | None:intergenic | 20.0% |
| !!! | TTTAGCAAAGAAAATTTTCA+TGG | - | chr1_2:59414091-59414110 | None:intergenic | 20.0% |
| !! | TTATTTGAAGAATCAAACAT+TGG | - | chr1_2:59414204-59414223 | None:intergenic | 20.0% |
| !!! | AGGAATTTTAAAAATCACTA+AGG | - | chr1_2:59414240-59414259 | None:intergenic | 20.0% |
| !!! | AAAATTCCTCATTAATTTGA+AGG | + | chr1_2:59414251-59414270 | Msa0080980:intron | 20.0% |
| !! | AGAAGAAACATGTAAAAATA+TGG | - | chr1_2:59414399-59414418 | None:intergenic | 20.0% |
| !! | TTTGATCGAAAGATAAATTA+AGG | - | chr1_2:59414436-59414455 | None:intergenic | 20.0% |
| !!! | AAAGTTGAATCTCTAAAATT+TGG | + | chr1_2:59414473-59414492 | Msa0080980:intron | 20.0% |
| !! | TAAAAAACTTCTTCAAACTT+TGG | + | chr1_2:59414714-59414733 | Msa0080980:intron | 20.0% |
| !! | AAAAAAATAGGGAGTAAAAT+TGG | - | chr1_2:59414758-59414777 | None:intergenic | 20.0% |
| !!! | GAACTTTTGCAAAAAAAAAT+AGG | - | chr1_2:59414770-59414789 | None:intergenic | 20.0% |
| !! | TTGAAGTTTCAGATAAATTA+AGG | + | chr1_2:59414902-59414921 | Msa0080980:intron | 20.0% |
| !! | ATTGGTATTGTAAAATTTAG+AGG | + | chr1_2:59414948-59414967 | Msa0080980:intron | 20.0% |
| !! | TTGGTATTGTAAAATTTAGA+GGG | + | chr1_2:59414949-59414968 | Msa0080980:intron | 20.0% |
| !!! | CATACATCAAATTTCATTTT+TGG | - | chr1_2:59415005-59415024 | None:intergenic | 20.0% |
| !! | AAAATGAAATTTGATGTATG+TGG | + | chr1_2:59415005-59415024 | Msa0080980:intron | 20.0% |
| !!! | CTAGTTTTTATAATAAGACT+TGG | - | chr1_2:59415110-59415129 | None:intergenic | 20.0% |
| !! | GAAATGAATTTATGTTCAAT+AGG | - | chr1_2:59415237-59415256 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr1_2:59415765-59415784 | Msa0080980:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr1_2:59415859-59415878 | Msa0080980:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr1_2:59415860-59415879 | Msa0080980:intron | 20.0% |
| !!! | AAACATTGACTGATTATTAT+TGG | - | chr1_2:59416171-59416190 | None:intergenic | 20.0% |
| !!! | TAATAATCAGTCAATGTTTT+TGG | + | chr1_2:59416172-59416191 | Msa0080980:intron | 20.0% |
| !! | TCTAAAAATAAGTATAGATC+AGG | + | chr1_2:59416514-59416533 | Msa0080980:CDS | 20.0% |
| !! | CTAAAAATAAGTATAGATCA+GGG | + | chr1_2:59416515-59416534 | Msa0080980:CDS | 20.0% |
| !! | ATGCTTTCAATATATTTCAA+TGG | + | chr1_2:59416979-59416998 | Msa0080980:intron | 20.0% |
| !! | ATAGATATATTACAGACATA+AGG | - | chr1_2:59417058-59417077 | None:intergenic | 20.0% |
| !!! | ATTAATGGACAATGTTTAAT+TGG | + | chr1_2:59417112-59417131 | Msa0080980:intron | 20.0% |
| !! | TTTAACCTAGTTATTAAGTT+CGG | - | chr1_2:59417310-59417329 | None:intergenic | 20.0% |
| !!! | ATTATCAAAATTGTCTTGTT+TGG | + | chr1_2:59417363-59417382 | Msa0080980:intron | 20.0% |
| !!! | GTTTGGTTTGAATATTTATT+TGG | + | chr1_2:59417380-59417399 | Msa0080980:intron | 20.0% |
| !! | TTGATTCAATAAAATTGAGT+TGG | + | chr1_2:59417556-59417575 | Msa0080980:intron | 20.0% |
| !! | CGTTTCATTCATAATAATAA+AGG | + | chr1_2:59417774-59417793 | Msa0080980:intron | 20.0% |
| !! | ATAATAAAGGCAATACATTT+AGG | + | chr1_2:59417787-59417806 | Msa0080980:intron | 20.0% |
| !!! | ATGTTTGATTTTAATTGGTT+GGG | - | chr1_2:59417996-59418015 | None:intergenic | 20.0% |
| !!! | ATGAGATGTTTGATTTTAAT+TGG | - | chr1_2:59418001-59418020 | None:intergenic | 20.0% |
| !!! | AACATGTGTCATATTTTTAT+TGG | + | chr1_2:59418173-59418192 | Msa0080980:intron | 20.0% |
| !! | ATAAATTTGTGTTTAAAAGG+AGG | + | chr1_2:59418247-59418266 | Msa0080980:intron | 20.0% |
| !! | AAAAAAAGAAAGCTTACTAT+TGG | + | chr1_2:59418388-59418407 | Msa0080980:intron | 20.0% |
| !! | CAACTTGTATTTAAATACTA+CGG | - | chr1_2:59418816-59418835 | None:intergenic | 20.0% |
| !! | GTATTATCAGTGAAAAATTA+GGG | - | chr1_2:59418850-59418869 | None:intergenic | 20.0% |
| !! | TGTATTATCAGTGAAAAATT+AGG | - | chr1_2:59418851-59418870 | None:intergenic | 20.0% |
| !!! | AATTTTTCACTGATAATACA+AGG | + | chr1_2:59418851-59418870 | Msa0080980:intron | 20.0% |
| !! | ATCTCAATTGAAAAAACATT+TGG | - | chr1_2:59419125-59419144 | None:intergenic | 20.0% |
| !!! | TTTGAGTTCTAAATTAGATA+AGG | - | chr1_2:59419203-59419222 | None:intergenic | 20.0% |
| !! | TTAATACACTCATTCAATTA+TGG | + | chr1_2:59419457-59419476 | Msa0080980:intron | 20.0% |
| !!! | TTGTATTACAGATTTTGAAA+TGG | + | chr1_2:59419884-59419903 | Msa0080980:intron | 20.0% |
| !! | TTACTTTGGCAATTTATTAA+AGG | - | chr1_2:59420309-59420328 | None:intergenic | 20.0% |
| !! | ATCAAGAATAAATAATCAAC+TGG | + | chr1_2:59420364-59420383 | Msa0080980:intron | 20.0% |
| !! | ATTTATATCTCGTAAATTTG+AGG | - | chr1_2:59420501-59420520 | None:intergenic | 20.0% |
| !! | TAATAACATCTTCAAAATTG+TGG | - | chr1_2:59420580-59420599 | None:intergenic | 20.0% |
| !!! | TATGTTTTTATTGGTTTTGA+TGG | + | chr1_2:59420638-59420657 | Msa0080980:intron | 20.0% |
| !!! | TAAGAAAATATTTTGATGGA+AGG | + | chr1_2:59420669-59420688 | Msa0080980:intron | 20.0% |
| !!! | TGATTGATATTTTTCAATCA+AGG | + | chr1_2:59420699-59420718 | Msa0080980:intron | 20.0% |
| !!! | GTAAATTATGATTCAACTTT+TGG | - | chr1_2:59420760-59420779 | None:intergenic | 20.0% |
| !! | TTAGTTTAAACCATGAATAT+TGG | + | chr1_2:59420794-59420813 | Msa0080980:intron | 20.0% |
| !!! | TTTTGTTAAACTAAGACAAA+AGG | - | chr1_2:59420847-59420866 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTAGTTTAACAAA+AGG | + | chr1_2:59420846-59420865 | Msa0080980:intron | 20.0% |
| !! | TTTGTCTTAGTTTAACAAAA+GGG | + | chr1_2:59420847-59420866 | Msa0080980:intron | 20.0% |
| !! | GTGAGAATATTAATTATAGT+TGG | - | chr1_2:59420972-59420991 | None:intergenic | 20.0% |
| !!! | GAGTTACTTATTTTTTGCTA+TGG | + | chr1_2:59412586-59412605 | Msa0080980:intron | 25.0% |
| ! | AATTACTAAAACGCGAATTA+TGG | + | chr1_2:59412627-59412646 | Msa0080980:intron | 25.0% |
| !! | TTTTATCTACGGAAATATGA+CGG | + | chr1_2:59412826-59412845 | Msa0080980:intron | 25.0% |
| !!! | ACATAACCATTTTTATGAAG+AGG | - | chr1_2:59413206-59413225 | None:intergenic | 25.0% |
| ! | AAAATGGTTATGTCAAACTT+TGG | + | chr1_2:59413213-59413232 | Msa0080980:intron | 25.0% |
| ! | ATGAAAAATGAAACTGAGTA+TGG | - | chr1_2:59413430-59413449 | None:intergenic | 25.0% |
| !! | CGTTGATAAATTCTATCAAT+TGG | + | chr1_2:59413483-59413502 | Msa0080980:intron | 25.0% |
| !!! | GGTTATTTTTACTTAACTTG+AGG | - | chr1_2:59413512-59413531 | None:intergenic | 25.0% |
| ! | TTATTTGTATAGAGTGTAGA+TGG | - | chr1_2:59413588-59413607 | None:intergenic | 25.0% |
| ! | CTACACTCTATACAAATAAT+AGG | + | chr1_2:59413589-59413608 | Msa0080980:intron | 25.0% |
| !!! | GAAAAATAGTAAGTTGATCA+TGG | + | chr1_2:59413912-59413931 | Msa0080980:intron | 25.0% |
| !!! | ATTTTCTTTGCTAAAGTACT+TGG | + | chr1_2:59414096-59414115 | Msa0080980:intron | 25.0% |
| !! | TTACATGTTTCTTCTTTTAC+CGG | + | chr1_2:59414404-59414423 | Msa0080980:intron | 25.0% |
| ! | AGAAAAACTCATTCAAAGTT+TGG | - | chr1_2:59414570-59414589 | None:intergenic | 25.0% |
| ! | TAAATTAAGGAAGATCAAAG+AGG | + | chr1_2:59414915-59414934 | Msa0080980:intron | 25.0% |
| ! | TGAATTTATGTTCAATAGGT+GGG | - | chr1_2:59415233-59415252 | None:intergenic | 25.0% |
| ! | ATGAATTTATGTTCAATAGG+TGG | - | chr1_2:59415234-59415253 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr1_2:59415570-59415589 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr1_2:59415571-59415590 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr1_2:59415893-59415912 | Msa0080980:intron | 25.0% |
| ! | ATGATTTGAACCATTTACAT+TGG | + | chr1_2:59416275-59416294 | Msa0080980:intron | 25.0% |
| ! | AACAATGAAATATATGCACA+TGG | - | chr1_2:59416734-59416753 | None:intergenic | 25.0% |
| !!! | CATACGATTTTCTTTTTCAT+AGG | + | chr1_2:59417215-59417234 | Msa0080980:intron | 25.0% |
| ! | AGTACATTTAGTCAATAGTT+TGG | + | chr1_2:59417270-59417289 | Msa0080980:intron | 25.0% |
| ! | AATAAGACTTACTTGCTTAA+AGG | - | chr1_2:59417346-59417365 | None:intergenic | 25.0% |
| ! | TACTATTATACCTTCATAGA+AGG | + | chr1_2:59417440-59417459 | Msa0080980:intron | 25.0% |
| !!! | GATGTTTGATTTTAATTGGT+TGG | - | chr1_2:59417997-59418016 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGGTTAAAGAAAG+TGG | - | chr1_2:59418090-59418109 | None:intergenic | 25.0% |
| ! | AAGGAAATGGAAACAATAAA+TGG | - | chr1_2:59418123-59418142 | None:intergenic | 25.0% |
| !!! | TGTGTCATATTTTTATTGGT+TGG | + | chr1_2:59418177-59418196 | Msa0080980:intron | 25.0% |
| ! | TTCAGAGTAAACTTGTAATA+TGG | + | chr1_2:59418547-59418566 | Msa0080980:intron | 25.0% |
| ! | CAATGATTAATTATGGAGTT+TGG | - | chr1_2:59418673-59418692 | None:intergenic | 25.0% |
| ! | ATTACAACATTACCCTTAAA+TGG | - | chr1_2:59418788-59418807 | None:intergenic | 25.0% |
| !!! | GCACATAAGGTTTTTAAAAA+TGG | + | chr1_2:59418898-59418917 | Msa0080980:intron | 25.0% |
| !!! | GCACATAAGGTTTTTAAAAA+TGG | + | chr1_2:59418898-59418917 | Msa0080980:intron | 25.0% |
| !!! | TTTTTTGCACTTTGTACAAA+CGG | - | chr1_2:59419075-59419094 | None:intergenic | 25.0% |
| ! | AAATCTGTAATACAAGAGTA+TGG | - | chr1_2:59419879-59419898 | None:intergenic | 25.0% |
| ! | GAATCTTACACAAATATAGA+TGG | - | chr1_2:59419918-59419937 | None:intergenic | 25.0% |
| ! | ATAAAATAGTATTTCCCACA+TGG | + | chr1_2:59420162-59420181 | Msa0080980:intron | 25.0% |
| !! | TTTTCAACTTCATTACCTTT+TGG | + | chr1_2:59420269-59420288 | Msa0080980:intron | 25.0% |
| !!! | CTTATACTTTTTGCACTTAT+AGG | - | chr1_2:59420410-59420429 | None:intergenic | 25.0% |
| !! | GTAAGCAACAATTTTATAGA+TGG | + | chr1_2:59420455-59420474 | Msa0080980:intron | 25.0% |
| !! | TGTCTTAAATAGTATTTTGC+TGG | - | chr1_2:59420613-59420632 | None:intergenic | 25.0% |
| !!! | CTGCTAAGAAAATATTTTGA+TGG | + | chr1_2:59420665-59420684 | Msa0080980:intron | 25.0% |
| !! | GGAGGGTATTATTATGATAA+TGG | + | chr1_2:59412196-59412215 | Msa0080980:CDS | 30.0% |
| ! | TTTCTGAATCTGAAATTCAC+TGG | + | chr1_2:59412332-59412351 | Msa0080980:CDS | 30.0% |
| CAATAACTATTACAACAGAG+AGG | - | chr1_2:59412433-59412452 | None:intergenic | 30.0% | |
| TATTGCGATTATGAACATTG+TGG | + | chr1_2:59412669-59412688 | Msa0080980:intron | 30.0% | |
| ! | TGAGTTTTACCTTTAGTTAG+TGG | - | chr1_2:59412718-59412737 | None:intergenic | 30.0% |
| CTACAACTGATAATAGTCAT+AGG | + | chr1_2:59412766-59412785 | Msa0080980:intron | 30.0% | |
| AAAATCAAAAAGCTAAGTCG+TGG | + | chr1_2:59412896-59412915 | Msa0080980:intron | 30.0% | |
| ATCTTGCCTCTTCATAAAAA+TGG | + | chr1_2:59413197-59413216 | Msa0080980:intron | 30.0% | |
| CAGTTTGATACAAAAAGAGA+GGG | - | chr1_2:59413253-59413272 | None:intergenic | 30.0% | |
| ! | TTTTTGTATCAAACTGGATC+AGG | + | chr1_2:59413257-59413276 | Msa0080980:intron | 30.0% |
| ! | TTAACTTACCTTGCTTTGAA+GGG | - | chr1_2:59413313-59413332 | None:intergenic | 30.0% |
| ATTAACTTACCTTGCTTTGA+AGG | - | chr1_2:59413314-59413333 | None:intergenic | 30.0% | |
| ATATAATTGGTTACTAGGAC+TGG | - | chr1_2:59413533-59413552 | None:intergenic | 30.0% | |
| AAAACAGTTGTACAAGTGAT+GGG | + | chr1_2:59413554-59413573 | Msa0080980:intron | 30.0% | |
| ! | TACAACATCTTTTAGATGGA+TGG | + | chr1_2:59413636-59413655 | Msa0080980:intron | 30.0% |
| TACATCTCTCACATAATGAT+CGG | - | chr1_2:59413696-59413715 | None:intergenic | 30.0% | |
| ! | AAAGCACAACTTGTTTGAAA+AGG | - | chr1_2:59414159-59414178 | None:intergenic | 30.0% |
| TTGTTGCCTTCAAATTAATG+AGG | - | chr1_2:59414260-59414279 | None:intergenic | 30.0% | |
| ACCAAACTTCAATGTACTAA+AGG | + | chr1_2:59414608-59414627 | Msa0080980:intron | 30.0% | |
| TCCTTTAGTACATTGAAGTT+TGG | - | chr1_2:59414612-59414631 | None:intergenic | 30.0% | |
| ! | TTTAAGATCTTGACAATGAC+AGG | - | chr1_2:59414823-59414842 | None:intergenic | 30.0% |
| CAAAGAGGAATGACTAAAAT+TGG | + | chr1_2:59414930-59414949 | Msa0080980:intron | 30.0% | |
| ACTTGAGAGTTTAGTTAACA+TGG | + | chr1_2:59415196-59415215 | Msa0080980:intron | 30.0% | |
| !! | ATAGAAGAGTGTTGAAAAAC+TGG | - | chr1_2:59415269-59415288 | None:intergenic | 30.0% |
| GTCAACCTTATAGTTATGAA+AGG | + | chr1_2:59415292-59415311 | Msa0080980:intron | 30.0% | |
| CTACTCCTTTCATAACTATA+AGG | - | chr1_2:59415300-59415319 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr1_2:59415953-59415972 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr1_2:59415952-59415971 | None:intergenic | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | + | chr1_2:59415633-59415652 | Msa0080980:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr1_2:59415892-59415911 | Msa0080980:intron | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr1_2:59415952-59415971 | Msa0080980:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr1_2:59415953-59415972 | Msa0080980:intron | 30.0% |
| AACTATAATCGTGCACATTT+AGG | + | chr1_2:59416063-59416082 | Msa0080980:intron | 30.0% | |
| ATATACAATGATAGTAACCG+AGG | - | chr1_2:59416354-59416373 | None:intergenic | 30.0% | |
| !!! | GTCTTGTTTTTCAAATGACA+GGG | - | chr1_2:59416392-59416411 | None:intergenic | 30.0% |
| !!! | TGTCTTGTTTTTCAAATGAC+AGG | - | chr1_2:59416393-59416412 | None:intergenic | 30.0% |
| AACTTAGCCATTAATCATCA+TGG | + | chr1_2:59416429-59416448 | Msa0080980:intron | 30.0% | |
| ACTTAGCCATTAATCATCAT+GGG | + | chr1_2:59416430-59416449 | Msa0080980:intron | 30.0% | |
| !!! | GTTTTTTTTTTTTGGTGGTG+AGG | - | chr1_2:59416841-59416860 | None:intergenic | 30.0% |
| TAACCATAAAAACATGCTGA+AGG | - | chr1_2:59417005-59417024 | None:intergenic | 30.0% | |
| ! | TAGAAGCATGATTTGTGTAA+TGG | - | chr1_2:59417028-59417047 | None:intergenic | 30.0% |
| AAACACCGAACTTAATAACT+AGG | + | chr1_2:59417302-59417321 | Msa0080980:intron | 30.0% | |
| ACTGTTAGTCAAAATATGTC+TGG | + | chr1_2:59417697-59417716 | Msa0080980:intron | 30.0% | |
| TTGGTTAAAGAAAGTGGAAA+AGG | - | chr1_2:59418084-59418103 | None:intergenic | 30.0% | |
| GAAATGGAAACAATAAATGG+TGG | - | chr1_2:59418120-59418139 | None:intergenic | 30.0% | |
| GGATGTAAGAATAATCTCTT+AGG | + | chr1_2:59418198-59418217 | Msa0080980:intron | 30.0% | |
| !!! | AGGGAAGCTTATTTTTACAA+TGG | + | chr1_2:59418482-59418501 | Msa0080980:intron | 30.0% |
| !!! | GGGAAGCTTATTTTTACAAT+GGG | + | chr1_2:59418483-59418502 | Msa0080980:intron | 30.0% |
| !!! | TTTTACAATGGGTTACAACT+AGG | + | chr1_2:59418494-59418513 | Msa0080980:intron | 30.0% |
| GTCGACACAATGATTAATTA+TGG | - | chr1_2:59418680-59418699 | None:intergenic | 30.0% | |
| AGAAAAATGCTACGACAAAA+AGG | + | chr1_2:59418931-59418950 | Msa0080980:intron | 30.0% | |
| ! | CTTTTTGCACTTTGTACAAA+CGG | - | chr1_2:59418975-59418994 | None:intergenic | 30.0% |
| TTGTACAAAGTGCAAAAAGT+AGG | + | chr1_2:59418976-59418995 | Msa0080980:intron | 30.0% | |
| GTTTGTACAAAGTGCAAAAA+AGG | + | chr1_2:59418974-59418993 | Msa0080980:intron | 30.0% | |
| TTTCACGATTTCTGCTATTA+CGG | - | chr1_2:59419329-59419348 | None:intergenic | 30.0% | |
| !!! | ATGTGCGAGGTTTTAAATAT+CGG | - | chr1_2:59419382-59419401 | None:intergenic | 30.0% |
| ! | TTTAAAACCTCGCACATTAT+TGG | + | chr1_2:59419385-59419404 | Msa0080980:intron | 30.0% |
| CATAAAATCAGAAAGATTGC+TGG | + | chr1_2:59419503-59419522 | Msa0080980:intron | 30.0% | |
| ! | TCTTTTACAAAGCACATCAT+TGG | + | chr1_2:59419535-59419554 | Msa0080980:intron | 30.0% |
| ! | CGATATAAAGGTATGAAGTT+GGG | - | chr1_2:59419612-59419631 | None:intergenic | 30.0% |
| CCAACTTCATACCTTTATAT+CGG | + | chr1_2:59419610-59419629 | Msa0080980:intron | 30.0% | |
| TATGATGATTAATGAGGTGA+TGG | - | chr1_2:59419665-59419684 | None:intergenic | 30.0% | |
| TGGATGTATGATGATTAATG+AGG | - | chr1_2:59419671-59419690 | None:intergenic | 30.0% | |
| ! | GACAAAACTCTAAAAATTGC+TGG | - | chr1_2:59419783-59419802 | None:intergenic | 30.0% |
| !! | TTTTGAAGAGTTCCTTTTGA+TGG | + | chr1_2:59419955-59419974 | Msa0080980:intron | 30.0% |
| ! | TTTGAAGAGTTCCTTTTGAT+GGG | + | chr1_2:59419956-59419975 | Msa0080980:intron | 30.0% |
| AAATATTGATAGAGGGAAAC+TGG | - | chr1_2:59420207-59420226 | None:intergenic | 30.0% | |
| ! | TTCATTACCTTTTGGACATT+TGG | + | chr1_2:59420277-59420296 | Msa0080980:intron | 30.0% |
| GAATATACCAAATGTCCAAA+AGG | - | chr1_2:59420287-59420306 | None:intergenic | 30.0% | |
| ! | ATGATTCAACTTTTGGACAA+AGG | - | chr1_2:59420753-59420772 | None:intergenic | 30.0% |
| TGGTTTAAACTAAGATCACA+TGG | - | chr1_2:59420787-59420806 | None:intergenic | 30.0% | |
| ! | AGAAAGTAGTCTTAATTGGA+AGG | - | chr1_2:59420944-59420963 | None:intergenic | 30.0% |
| ! | GACTAGAAAGTAGTCTTAAT+TGG | - | chr1_2:59420948-59420967 | None:intergenic | 30.0% |
| TCGTTTCTCACTTGTAAAAT+GGG | + | chr1_2:59420999-59421018 | Msa0080980:intron | 30.0% | |
| AGTCTTCTAAATCATCATTC+AGG | + | chr1_2:59421039-59421058 | Msa0080980:intron | 30.0% | |
| ! | TTTCTGAATCTGAAATTCAC+TGG | + | chr1_2:59412332-59412351 | Msa0080980:CDS | 30.0% |
| TCTAGTAGTAACAAGCAAAG+AGG | + | chr1_2:59412148-59412167 | Msa0080980:CDS | 35.0% | |
| GTGCATATGATAACAAAGTG+TGG | + | chr1_2:59412218-59412237 | Msa0080980:CDS | 35.0% | |
| GTTCATAATCGCAATAGTAG+TGG | - | chr1_2:59412665-59412684 | None:intergenic | 35.0% | |
| TACCTACAACCACTAACTAA+AGG | + | chr1_2:59412706-59412725 | Msa0080980:intron | 35.0% | |
| TACCTTTAGTTAGTGGTTGT+AGG | - | chr1_2:59412711-59412730 | None:intergenic | 35.0% | |
| GCTCTACTCAAAATAGTTGA+CGG | - | chr1_2:59412925-59412944 | None:intergenic | 35.0% | |
| TTTGAGTAGAGCTGTCAAAA+CGG | + | chr1_2:59412933-59412952 | Msa0080980:intron | 35.0% | |
| ! | TAAAAAGCCCGGTTTGAATA+TGG | + | chr1_2:59412998-59413017 | Msa0080980:intron | 35.0% |
| ! | AAAAAGCCCGGTTTGAATAT+GGG | + | chr1_2:59412999-59413018 | Msa0080980:intron | 35.0% |
| !! | TTGAATATGGGCTGGAAAAT+TGG | + | chr1_2:59413011-59413030 | Msa0080980:intron | 35.0% |
| !! | TGAATATGGGCTGGAAAATT+GGG | + | chr1_2:59413012-59413031 | Msa0080980:intron | 35.0% |
| AAAAAAAAAGATACGGGCCA+GGG | - | chr1_2:59413081-59413100 | None:intergenic | 35.0% | |
| AAAAAAAAAAGATACGGGCC+AGG | - | chr1_2:59413082-59413101 | None:intergenic | 35.0% | |
| CCAGTTTGATACAAAAAGAG+AGG | - | chr1_2:59413254-59413273 | None:intergenic | 35.0% | |
| ! | CCTCTCTTTTTGTATCAAAC+TGG | + | chr1_2:59413251-59413270 | Msa0080980:intron | 35.0% |
| GAAAACAGTTGTACAAGTGA+TGG | + | chr1_2:59413553-59413572 | Msa0080980:intron | 35.0% | |
| TAAAAAGCCCTGAATCGATT+CGG | + | chr1_2:59413813-59413832 | Msa0080980:intron | 35.0% | |
| AAAATCAGAGCTGTCAAAAC+GGG | - | chr1_2:59413885-59413904 | None:intergenic | 35.0% | |
| CAAAATCAGAGCTGTCAAAA+CGG | - | chr1_2:59413886-59413905 | None:intergenic | 35.0% | |
| AAGTCTACAAATTACCCCAT+TGG | + | chr1_2:59413942-59413961 | Msa0080980:intron | 35.0% | |
| !!! | GAGAACGTTACTTTTACTTC+TGG | + | chr1_2:59414044-59414063 | Msa0080980:intron | 35.0% |
| !!! | AACGTTACTTTTACTTCTGG+TGG | + | chr1_2:59414047-59414066 | Msa0080980:intron | 35.0% |
| CTAATATTCCTCTCATGAAG+CGG | + | chr1_2:59414303-59414322 | Msa0080980:intron | 35.0% | |
| TAATATTCCTCTCATGAAGC+GGG | + | chr1_2:59414304-59414323 | Msa0080980:intron | 35.0% | |
| AGATAAATTAAGGACAGAGC+CGG | - | chr1_2:59414426-59414445 | None:intergenic | 35.0% | |
| CGTTCGAAGGAAATTCTTAT+AGG | + | chr1_2:59414977-59414996 | Msa0080980:intron | 35.0% | |
| TGACCAATTGTACGAATCAA+CGG | - | chr1_2:59415173-59415192 | None:intergenic | 35.0% | |
| ! | TTGATTCGTACAATTGGTCA+TGG | + | chr1_2:59415173-59415192 | Msa0080980:intron | 35.0% |
| !! | GTTGAAAAACTGGTTCTAGA+TGG | - | chr1_2:59415259-59415278 | None:intergenic | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | - | chr1_2:59415937-59415956 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr1_2:59415937-59415956 | Msa0080980:intron | 35.0% | |
| TCTCTCATGTACGAAACTAT+CGG | + | chr1_2:59416202-59416221 | Msa0080980:intron | 35.0% | |
| ! | TTGTCAAGGTACATTTTCTG+TGG | - | chr1_2:59416229-59416248 | None:intergenic | 35.0% |
| GTGGTAAAGACCAATGTAAA+TGG | - | chr1_2:59416288-59416307 | None:intergenic | 35.0% | |
| TCAAGAATCTGATAAAGCAG+TGG | - | chr1_2:59416307-59416326 | None:intergenic | 35.0% | |
| AGATGCGATTCTTGTATTTG+CGG | - | chr1_2:59416642-59416661 | None:intergenic | 35.0% | |
| ATGCAAAATACACTTGGTTG+AGG | - | chr1_2:59416874-59416893 | None:intergenic | 35.0% | |
| TCGACAATGCAAAATACACT+TGG | - | chr1_2:59416880-59416899 | None:intergenic | 35.0% | |
| ! | TGAAAAACCCTTGATGACTA+GGG | + | chr1_2:59417238-59417257 | Msa0080980:intron | 35.0% |
| AGTTAATCCCTAGTCATCAA+GGG | - | chr1_2:59417248-59417267 | None:intergenic | 35.0% | |
| TATACCTTCATAGAAGGTGA+AGG | + | chr1_2:59417446-59417465 | Msa0080980:intron | 35.0% | |
| TGGAAACAATAAATGGTGGT+GGG | - | chr1_2:59418116-59418135 | None:intergenic | 35.0% | |
| ATGGAAACAATAAATGGTGG+TGG | - | chr1_2:59418117-59418136 | None:intergenic | 35.0% | |
| ! | GACTCATATTCGTTGATAAG+TGG | + | chr1_2:59418434-59418453 | Msa0080980:intron | 35.0% |
| !! | TTACTCTGAAATGTAGTGCA+TGG | - | chr1_2:59418537-59418556 | None:intergenic | 35.0% |
| ATTGGAGATGTAGGTACAAT+TGG | + | chr1_2:59418647-59418666 | Msa0080980:intron | 35.0% | |
| ACTCATAGGTACATTGAAAG+TGG | + | chr1_2:59418704-59418723 | Msa0080980:intron | 35.0% | |
| CTCATAGGTACATTGAAAGT+GGG | + | chr1_2:59418705-59418724 | Msa0080980:intron | 35.0% | |
| AATGCTACGACAAAAAGGTA+TGG | + | chr1_2:59418936-59418955 | Msa0080980:intron | 35.0% | |
| ! | ATGCTACGACAAAAAGGTAT+GGG | + | chr1_2:59418937-59418956 | Msa0080980:intron | 35.0% |
| ATGGTTCGTTACTGAGAAAA+AGG | + | chr1_2:59418917-59418936 | Msa0080980:intron | 35.0% | |
| AGAAAAAGGCTACGACAAAA+AGG | + | chr1_2:59419031-59419050 | Msa0080980:intron | 35.0% | |
| TCTGTGTCTATTGTCATGAA+TGG | - | chr1_2:59419100-59419119 | None:intergenic | 35.0% | |
| GGATGTTGTGTTAAGAATTG+CGG | - | chr1_2:59419308-59419327 | None:intergenic | 35.0% | |
| TATAATGCCAATAATGTGCG+AGG | - | chr1_2:59419395-59419414 | None:intergenic | 35.0% | |
| CGCACATTATTGGCATTATA+TGG | + | chr1_2:59419395-59419414 | Msa0080980:intron | 35.0% | |
| CATTCAATTATGGTCGATGA+TGG | + | chr1_2:59419467-59419486 | Msa0080980:intron | 35.0% | |
| AATGCAGAATGTTAACGCTA+AGG | - | chr1_2:59419586-59419605 | None:intergenic | 35.0% | |
| ! | CCGATATAAAGGTATGAAGT+TGG | - | chr1_2:59419613-59419632 | None:intergenic | 35.0% |
| ACTTCATACCTTTATATCGG+TGG | + | chr1_2:59419613-59419632 | Msa0080980:intron | 35.0% | |
| CTTAAACACCACCGATATAA+AGG | - | chr1_2:59419624-59419643 | None:intergenic | 35.0% | |
| ! | TTACCTGTCCTTGTTTACTT+TGG | - | chr1_2:59419730-59419749 | None:intergenic | 35.0% |
| CATTCTGTTGAAAGCAGTAA+AGG | - | chr1_2:59420127-59420146 | None:intergenic | 35.0% | |
| GATTTCAAACAAGTCCATGT+GGG | - | chr1_2:59420179-59420198 | None:intergenic | 35.0% | |
| AGATTTCAAACAAGTCCATG+TGG | - | chr1_2:59420180-59420199 | None:intergenic | 35.0% | |
| GAATCTGATTCAAACCACTA+GGG | - | chr1_2:59420825-59420844 | None:intergenic | 35.0% | |
| GTCTTAATTGGAAGGAAGTA+TGG | - | chr1_2:59420936-59420955 | None:intergenic | 35.0% | |
| ! | TTTTACAAGTGAGAAACGAC+TGG | - | chr1_2:59420998-59421017 | None:intergenic | 35.0% |
| GTCGTTTCTCACTTGTAAAA+TGG | + | chr1_2:59420998-59421017 | Msa0080980:intron | 35.0% | |
| TTTCTCACTTGTAAAATGGG+AGG | + | chr1_2:59421002-59421021 | Msa0080980:intron | 35.0% | |
| AAATGGGAGGAAACAATCAA+AGG | + | chr1_2:59421015-59421034 | Msa0080980:intron | 35.0% | |
| TGATGAAGATAGAGGTAGTT+GGG | + | chr1_2:59421157-59421176 | Msa0080980:CDS | 35.0% | |
| AGTAGTAACAAGCAAAGAGG+AGG | + | chr1_2:59412151-59412170 | Msa0080980:CDS | 40.0% | |
| GTAGCTCTCATGTCAATAAC+AGG | - | chr1_2:59412283-59412302 | None:intergenic | 40.0% | |
| CAACCTGATCAGTAGGATAT+AGG | + | chr1_2:59412361-59412380 | Msa0080980:intron | 40.0% | |
| GTTCCTATATCCTACTGATC+AGG | - | chr1_2:59412367-59412386 | None:intergenic | 40.0% | |
| TTGAGTAGAGCTGTCAAAAC+GGG | + | chr1_2:59412934-59412953 | Msa0080980:intron | 40.0% | |
| TTTCCAGCCCATATTCAAAC+CGG | - | chr1_2:59413009-59413028 | None:intergenic | 40.0% | |
| !! | GAATATGGGCTGGAAAATTG+GGG | + | chr1_2:59413013-59413032 | Msa0080980:intron | 40.0% |
| GAAATATCGAGCCAATCACT+TGG | + | chr1_2:59413149-59413168 | Msa0080980:intron | 40.0% | |
| GTTAATTGCGTCCAAGTGAT+TGG | - | chr1_2:59413163-59413182 | None:intergenic | 40.0% | |
| TCACTTGGACGCAATTAACA+TGG | + | chr1_2:59413164-59413183 | Msa0080980:intron | 40.0% | |
| CTGGATCAGGTTCTTATGAT+TGG | + | chr1_2:59413270-59413289 | Msa0080980:intron | 40.0% | |
| AAAGAAGTCCCTTCAAAGCA+AGG | + | chr1_2:59413302-59413321 | Msa0080980:intron | 40.0% | |
| ATCTCTCACATAATGATCGG+CGG | - | chr1_2:59413693-59413712 | None:intergenic | 40.0% | |
| ! | AAAAAGCCCTGAATCGATTC+GGG | + | chr1_2:59413814-59413833 | Msa0080980:intron | 40.0% |
| AGAGTTAGCTGAAAAACCAG+TGG | + | chr1_2:59415137-59415156 | Msa0080980:intron | 40.0% | |
| TGCGATAAGAAAAAACGAGC+AGG | - | chr1_2:59415390-59415409 | None:intergenic | 40.0% | |
| GGGTTGTAACAACTTTGTCA+AGG | - | chr1_2:59416243-59416262 | None:intergenic | 40.0% | |
| ! | TGGTTCAAATCATGCTGACT+TGG | - | chr1_2:59416268-59416287 | None:intergenic | 40.0% |
| TACAATGATAGTAACCGAGG+AGG | - | chr1_2:59416351-59416370 | None:intergenic | 40.0% | |
| TAGCCATTAATCATCATGGG+AGG | + | chr1_2:59416433-59416452 | Msa0080980:intron | 40.0% | |
| ! | TCAGGGTACTATGATGATTG+CGG | + | chr1_2:59416532-59416551 | Msa0080980:CDS | 40.0% |
| TTACCTTTGTCTTCATCGCT+AGG | - | chr1_2:59416571-59416590 | None:intergenic | 40.0% | |
| CGATGAAGACAAAGGTAACT+GGG | + | chr1_2:59416573-59416592 | Msa0080980:CDS | 40.0% | |
| GATGAAGACAAAGGTAACTG+GGG | + | chr1_2:59416574-59416593 | Msa0080980:CDS | 40.0% | |
| TTGCTGAGCCCAATATTAAC+CGG | + | chr1_2:59416599-59416618 | Msa0080980:CDS | 40.0% | |
| TCAGCTCTCCGGTTAATATT+GGG | - | chr1_2:59416610-59416629 | None:intergenic | 40.0% | |
| TTCAGCTCTCCGGTTAATAT+TGG | - | chr1_2:59416611-59416630 | None:intergenic | 40.0% | |
| !! | TGGATCAACTTGATAGCGTT+CGG | - | chr1_2:59416671-59416690 | None:intergenic | 40.0% |
| ! | CCTTATTTATTCTAGGCAGC+TGG | - | chr1_2:59416691-59416710 | None:intergenic | 40.0% |
| CCAGCTGCCTAGAATAAATA+AGG | + | chr1_2:59416688-59416707 | Msa0080980:intron | 40.0% | |
| !! | TGGCCTTCAGCATGTTTTTA+TGG | + | chr1_2:59416999-59417018 | Msa0080980:intron | 40.0% |
| ! | GTGAAAAACCCTTGATGACT+AGG | + | chr1_2:59417237-59417256 | Msa0080980:intron | 40.0% |
| GAGTTAATCCCTAGTCATCA+AGG | - | chr1_2:59417249-59417268 | None:intergenic | 40.0% | |
| CTTTCCTTCACCTTCTATGA+AGG | - | chr1_2:59417453-59417472 | None:intergenic | 40.0% | |
| !! | TGATGACGTTGAGTGTGTTT+TGG | + | chr1_2:59417500-59417519 | Msa0080980:intron | 40.0% |
| GGGTGTAAGAATGATCTCTT+AGG | - | chr1_2:59417976-59417995 | None:intergenic | 40.0% | |
| !! | AAACAATAAATGGTGGTGGG+TGG | - | chr1_2:59418113-59418132 | None:intergenic | 40.0% |
| ! | TGTGTGTCTGTTGGATTTTC+AGG | - | chr1_2:59418296-59418315 | None:intergenic | 40.0% |
| CCAATTTCATGTGTGTCTGT+TGG | - | chr1_2:59418305-59418324 | None:intergenic | 40.0% | |
| CCAACAGACACACATGAAAT+TGG | + | chr1_2:59418302-59418321 | Msa0080980:intron | 40.0% | |
| !! | TACAATGGGTTACAACTAGG+AGG | + | chr1_2:59418497-59418516 | Msa0080980:intron | 40.0% |
| !! | ACAATGGGTTACAACTAGGA+GGG | + | chr1_2:59418498-59418517 | Msa0080980:intron | 40.0% |
| CAATGTCGAAGTGATTGTTG+TGG | - | chr1_2:59418631-59418650 | None:intergenic | 40.0% | |
| CACAACAATCACTTCGACAT+TGG | + | chr1_2:59418629-59418648 | Msa0080980:intron | 40.0% | |
| !! | TTGTGTCGACTATGACTCAT+AGG | + | chr1_2:59418690-59418709 | Msa0080980:intron | 40.0% |
| ! | ATTGAAGTACTCGAAGACGT+AGG | + | chr1_2:59418876-59418895 | Msa0080980:intron | 40.0% |
| CTTTGTACAAACGGTAACGT+CGG | - | chr1_2:59418966-59418985 | None:intergenic | 40.0% | |
| GTGCAAAAAGTAGGCACATA+AGG | + | chr1_2:59418985-59419004 | Msa0080980:intron | 40.0% | |
| AAGGCTACGACAAAAAGGTA+TGG | + | chr1_2:59419036-59419055 | Msa0080980:intron | 40.0% | |
| ! | AGGCTACGACAAAAAGGTAT+GGG | + | chr1_2:59419037-59419056 | Msa0080980:intron | 40.0% |
| CTTTGTACAAACGGTAACGT+CGG | - | chr1_2:59418966-59418985 | None:intergenic | 40.0% | |
| GTTAAGAATTGCGGTTGTCA+CGG | - | chr1_2:59419299-59419318 | None:intergenic | 40.0% | |
| !!! | GAGGTTTTAAATATCGGTCG+CGG | - | chr1_2:59419376-59419395 | None:intergenic | 40.0% |
| ! | ATATGGTGACTTGTGACAGA+AGG | + | chr1_2:59419412-59419431 | Msa0080980:intron | 40.0% |
| !! | TTATGGTCGATGATGGATCA+TGG | + | chr1_2:59419474-59419493 | Msa0080980:intron | 40.0% |
| ! | TGTTTACTTTGGAGGGTACA+TGG | - | chr1_2:59419719-59419738 | None:intergenic | 40.0% |
| TGTACCCTCCAAAGTAAACA+AGG | + | chr1_2:59419719-59419738 | Msa0080980:intron | 40.0% | |
| ! | CTGTCCTTGTTTACTTTGGA+GGG | - | chr1_2:59419726-59419745 | None:intergenic | 40.0% |
| TCGGTTATGAACCCATCAAA+AGG | - | chr1_2:59419970-59419989 | None:intergenic | 40.0% | |
| TAGGGTGAGTCCAATATTCA+TGG | - | chr1_2:59420807-59420826 | None:intergenic | 40.0% | |
| GGAATCTGATTCAAACCACT+AGG | - | chr1_2:59420826-59420845 | None:intergenic | 40.0% | |
| TGTGCTTCAACTTAGAAGCA+GGG | - | chr1_2:59420908-59420927 | None:intergenic | 40.0% | |
| TTGTGCTTCAACTTAGAAGC+AGG | - | chr1_2:59420909-59420928 | None:intergenic | 40.0% | |
| TCTAGCAGTAACAAGCAAAG+AGG | + | chr1_2:59421083-59421102 | Msa0080980:CDS | 40.0% | |
| !! | GGAGGAGAGTATTATGATCA+TGG | + | chr1_2:59421107-59421126 | Msa0080980:CDS | 40.0% |
| GTGCTTATGCTAACAAAGTG+TGG | + | chr1_2:59421129-59421148 | Msa0080980:CDS | 40.0% | |
| CTACCTCTATCTTCATCACT+TGG | - | chr1_2:59421155-59421174 | None:intergenic | 40.0% | |
| GTGATGAAGATAGAGGTAGT+TGG | + | chr1_2:59421156-59421175 | Msa0080980:CDS | 40.0% | |
| GATGAAGATAGAGGTAGTTG+GGG | + | chr1_2:59421158-59421177 | Msa0080980:CDS | 40.0% | |
| GTAGCTCTCATGTCAATAAC+AGG | - | chr1_2:59412283-59412302 | None:intergenic | 40.0% | |
| AGTAACAAGCAAAGAGGAGG+AGG | + | chr1_2:59412154-59412173 | Msa0080980:CDS | 45.0% | |
| TGATGAAGACAGAGGCAGTT+GGG | + | chr1_2:59412246-59412265 | Msa0080980:CDS | 45.0% | |
| TTCCAGCCCATATTCAAACC+GGG | - | chr1_2:59413008-59413027 | None:intergenic | 45.0% | |
| !!! | TGTATTTTTTGGCGGGCTTG+CGG | + | chr1_2:59413732-59413751 | Msa0080980:intron | 45.0% |
| !! | CGATTCGGGCTCCAAATTTT+TGG | + | chr1_2:59413828-59413847 | Msa0080980:intron | 45.0% |
| !! | GCGGGTCTGTTGTTTCTTTA+AGG | + | chr1_2:59414322-59414341 | Msa0080980:intron | 45.0% |
| !! | CTGCCGTTGATTCGTACAAT+TGG | + | chr1_2:59415167-59415186 | Msa0080980:intron | 45.0% |
| !! | CAAATCATGCTGACTTGGCA+GGG | - | chr1_2:59416263-59416282 | None:intergenic | 45.0% |
| !! | TCAAATCATGCTGACTTGGC+AGG | - | chr1_2:59416264-59416283 | None:intergenic | 45.0% |
| CTATGCAATTCAAGCCTCCT+CGG | + | chr1_2:59416334-59416353 | Msa0080980:intron | 45.0% | |
| CCACCTCCCATGATGATTAA+TGG | - | chr1_2:59416439-59416458 | None:intergenic | 45.0% | |
| CCATTAATCATCATGGGAGG+TGG | + | chr1_2:59416436-59416455 | Msa0080980:intron | 45.0% | |
| TCATCATGGGAGGTGGTAAT+AGG | + | chr1_2:59416443-59416462 | Msa0080980:intron | 45.0% | |
| AGGCAGAACAAGTCTTCTTC+AGG | + | chr1_2:59416463-59416482 | Msa0080980:intron | 45.0% | |
| ! | CAGGGTACTATGATGATTGC+GGG | + | chr1_2:59416533-59416552 | Msa0080980:CDS | 45.0% |
| GCGATGAAGACAAAGGTAAC+TGG | + | chr1_2:59416572-59416591 | Msa0080980:CDS | 45.0% | |
| GGATGAAATCTTCAGCTCTC+CGG | - | chr1_2:59416621-59416640 | None:intergenic | 45.0% | |
| !! | GTGTCTGTTGGATTTTCAGG+TGG | - | chr1_2:59418293-59418312 | None:intergenic | 45.0% |
| TGCTCAAGCGTGACAAAATG+AGG | + | chr1_2:59418462-59418481 | Msa0080980:intron | 45.0% | |
| GCTCAAGCGTGACAAAATGA+GGG | + | chr1_2:59418463-59418482 | Msa0080980:intron | 45.0% | |
| CACTTCGACATTGGAGATGT+AGG | + | chr1_2:59418638-59418657 | Msa0080980:intron | 45.0% | |
| TAGGTACATTGAAAGTGGGC+AGG | + | chr1_2:59418709-59418728 | Msa0080980:intron | 45.0% | |
| AGGTACATTGAAAGTGGGCA+GGG | + | chr1_2:59418710-59418729 | Msa0080980:intron | 45.0% | |
| CTCAAGCGGGTACCATTTAA+GGG | + | chr1_2:59418773-59418792 | Msa0080980:intron | 45.0% | |
| TTAAATATCGGTCGCGGTCA+AGG | - | chr1_2:59419370-59419389 | None:intergenic | 45.0% | |
| GTTATGTTGTGCTGCGAAGA+TGG | - | chr1_2:59419691-59419710 | None:intergenic | 45.0% | |
| ! | CCTGTCCTTGTTTACTTTGG+AGG | - | chr1_2:59419727-59419746 | None:intergenic | 45.0% |
| CCTCCAAAGTAAACAAGGAC+AGG | + | chr1_2:59419724-59419743 | Msa0080980:intron | 45.0% | |
| !! | CAGCAGTTCTGGCTTTACTT+TGG | - | chr1_2:59420323-59420342 | None:intergenic | 45.0% |
| CAAAGTAAAGCCAGAACTGC+TGG | + | chr1_2:59420321-59420340 | Msa0080980:intron | 45.0% | |
| GAATATTGGACTCACCCTAG+TGG | + | chr1_2:59420808-59420827 | Msa0080980:intron | 45.0% | |
| GTGCTTCAACTTAGAAGCAG+GGG | - | chr1_2:59420907-59420926 | None:intergenic | 45.0% | |
| AGCAGTAACAAGCAAAGAGG+TGG | + | chr1_2:59421086-59421105 | Msa0080980:CDS | 45.0% | |
| AGTAACAAGCAAAGAGGTGG+AGG | + | chr1_2:59421089-59421108 | Msa0080980:CDS | 45.0% | |
| TGGCCAAGTGATGAAGATAG+AGG | + | chr1_2:59421149-59421168 | Msa0080980:CDS | 45.0% | |
| !!! | AAAAAAAAAATTGTATTTTT+TGG | + | chr1_2:59413721-59413740 | Msa0080980:intron | 5.0% |
| !! | TAATATGATAAAAATAATTA+GGG | + | chr1_2:59414666-59414685 | Msa0080980:intron | 5.0% |
| !! | TTTAAATGTATTAATTATTA+CGG | - | chr1_2:59415050-59415069 | None:intergenic | 5.0% |
| !!! | TATTATTAGTTTTTTTTTTT+TGG | - | chr1_2:59416849-59416868 | None:intergenic | 5.0% |
| !!! | AAAAAATTTGATTTTAATTA+AGG | - | chr1_2:59418142-59418161 | None:intergenic | 5.0% |
| !!! | TTCAATTTTTATTTTTATTT+TGG | + | chr1_2:59419808-59419827 | Msa0080980:intron | 5.0% |
| AACAAGCAAAGAGGAGGAGG+AGG | + | chr1_2:59412157-59412176 | Msa0080980:CDS | 50.0% | |
| TGGCCAAGTGATGAAGACAG+AGG | + | chr1_2:59412238-59412257 | Msa0080980:CDS | 50.0% | |
| CTGCCTCTGTCTTCATCACT+TGG | - | chr1_2:59412244-59412263 | None:intergenic | 50.0% | |
| GTGATGAAGACAGAGGCAGT+TGG | + | chr1_2:59412245-59412264 | Msa0080980:CDS | 50.0% | |
| GATGAAGACAGAGGCAGTTG+GGG | + | chr1_2:59412247-59412266 | Msa0080980:CDS | 50.0% | |
| GCAAGCTCAACCTGATCAGT+AGG | + | chr1_2:59412354-59412373 | Msa0080980:intron | 50.0% | |
| AGTAGAGCTGTCAAAACGGG+CGG | + | chr1_2:59412937-59412956 | Msa0080980:intron | 50.0% | |
| TAAAAAACCCGTTGCCCGAC+CGG | - | chr1_2:59412969-59412988 | None:intergenic | 50.0% | |
| !!! | GTCGGGCAACGGGTTTTTTA+GGG | + | chr1_2:59412969-59412988 | Msa0080980:intron | 50.0% |
| !! | TCAAACCGGGCTTTTTAGCC+CGG | - | chr1_2:59412995-59413014 | None:intergenic | 50.0% |
| !!! | GTATTTTTTGGCGGGCTTGC+GGG | + | chr1_2:59413733-59413752 | Msa0080980:intron | 50.0% |
| !! | CGATTCAGGGCTTTTTAGCC+CGG | - | chr1_2:59413810-59413829 | None:intergenic | 50.0% |
| ! | TTGGAGCCCGAATCGATTCA+GGG | - | chr1_2:59413823-59413842 | None:intergenic | 50.0% |
| ! | TTTGGAGCCCGAATCGATTC+AGG | - | chr1_2:59413824-59413843 | None:intergenic | 50.0% |
| CCGAATTAAATGCAGGGCCT+GGG | - | chr1_2:59413854-59413873 | None:intergenic | 50.0% | |
| CCCAGGCCCTGCATTTAATT+CGG | + | chr1_2:59413851-59413870 | Msa0080980:intron | 50.0% | |
| CCAGGCCCTGCATTTAATTC+GGG | + | chr1_2:59413852-59413871 | Msa0080980:intron | 50.0% | |
| CAGGCCCTGCATTTAATTCG+GGG | + | chr1_2:59413853-59413872 | Msa0080980:intron | 50.0% | |
| AGGCCCTGCATTTAATTCGG+GGG | + | chr1_2:59413854-59413873 | Msa0080980:intron | 50.0% | |
| TTAGAGGGAGCAACGTTCGA+AGG | + | chr1_2:59414964-59414983 | Msa0080980:intron | 50.0% | |
| ATGATTGCGGGCACAAGACA+TGG | + | chr1_2:59416545-59416564 | Msa0080980:CDS | 50.0% | |
| TGGCCTAGCGATGAAGACAA+AGG | + | chr1_2:59416565-59416584 | Msa0080980:CDS | 50.0% | |
| !!! | TGGTGGTGGGTGGTTTTTGT+TGG | - | chr1_2:59418103-59418122 | None:intergenic | 50.0% |
| TGGGTTACAACTAGGAGGGA+TGG | + | chr1_2:59418502-59418521 | Msa0080980:intron | 50.0% | |
| GGGTTACAACTAGGAGGGAT+GGG | + | chr1_2:59418503-59418522 | Msa0080980:intron | 50.0% | |
| GGTTACAACTAGGAGGGATG+GGG | + | chr1_2:59418504-59418523 | Msa0080980:intron | 50.0% | |
| GTTACAACTAGGAGGGATGG+GGG | + | chr1_2:59418505-59418524 | Msa0080980:intron | 50.0% | |
| TTACAACTAGGAGGGATGGG+GGG | + | chr1_2:59418506-59418525 | Msa0080980:intron | 50.0% | |
| TGAAAGTGGGCAGGGTTGAA+CGG | + | chr1_2:59418718-59418737 | Msa0080980:intron | 50.0% | |
| AAGGCCAAAGCCAGGTTTCA+CGG | - | chr1_2:59418751-59418770 | None:intergenic | 50.0% | |
| GCTCAAGCGGGTACCATTTA+AGG | + | chr1_2:59418772-59418791 | Msa0080980:intron | 50.0% | |
| CTCGAAGACGTAGGCACATA+AGG | + | chr1_2:59418885-59418904 | Msa0080980:intron | 50.0% | |
| TAAAGCCAGAACTGCTGGCA+GGG | + | chr1_2:59420326-59420345 | Msa0080980:intron | 50.0% | |
| AAGCAAAGAGGAGGAGGAGG+AGG | + | chr1_2:59412160-59412179 | Msa0080980:CDS | 55.0% | |
| AAAAAACCCGTTGCCCGACC+GGG | - | chr1_2:59412968-59412987 | None:intergenic | 55.0% | |
| !!! | GGTCGGGCAACGGGTTTTTT+AGG | + | chr1_2:59412968-59412987 | Msa0080980:intron | 55.0% |
| !!! | GGCAACGGGTTTTTTAGGGC+CGG | + | chr1_2:59412973-59412992 | Msa0080980:intron | 55.0% |
| !!! | GCAACGGGTTTTTTAGGGCC+GGG | + | chr1_2:59412974-59412993 | Msa0080980:intron | 55.0% |
| ! | AGCCCGGTTTGAATATGGGC+TGG | + | chr1_2:59413003-59413022 | Msa0080980:intron | 55.0% |
| AAAAAGATACGGGCCAGGGC+CGG | - | chr1_2:59413077-59413096 | None:intergenic | 55.0% | |
| !!! | GGGCTCCAAATTTTTGGCCC+AGG | + | chr1_2:59413834-59413853 | Msa0080980:intron | 55.0% |
| CAGGGCCTGGGCCAAAAATT+TGG | - | chr1_2:59413842-59413861 | None:intergenic | 55.0% | |
| CCCGAATTAAATGCAGGGCC+TGG | - | chr1_2:59413855-59413874 | None:intergenic | 55.0% | |
| GGGCCCCCGAATTAAATGCA+GGG | - | chr1_2:59413860-59413879 | None:intergenic | 55.0% | |
| CTGCATTTAATTCGGGGGCC+CGG | + | chr1_2:59413859-59413878 | Msa0080980:intron | 55.0% | |
| TCAGAGCTGTCAAAACGGGC+CGG | - | chr1_2:59413881-59413900 | None:intergenic | 55.0% | |
| CAACAGACCCGCTTCATGAG+AGG | - | chr1_2:59414314-59414333 | None:intergenic | 55.0% | |
| GAAAGTGGGCAGGGTTGAAC+GGG | + | chr1_2:59418719-59418738 | Msa0080980:intron | 55.0% | |
| !! | GTGAAACCTGGCTTTGGCCT+TGG | + | chr1_2:59418750-59418769 | Msa0080980:intron | 55.0% |
| AATGGTACCCGCTTGAGCCA+AGG | - | chr1_2:59418770-59418789 | None:intergenic | 55.0% | |
| TCAAGGTTGCGGTCGCGTAT+AGG | - | chr1_2:59419353-59419372 | None:intergenic | 55.0% | |
| GTAAAGCCAGAACTGCTGGC+AGG | + | chr1_2:59420325-59420344 | Msa0080980:intron | 55.0% | |
| CAAAGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412163-59412182 | Msa0080980:CDS | 60.0% | |
| TAGGGCCGGGCTAAAAAGCC+CGG | + | chr1_2:59412987-59413006 | Msa0080980:intron | 60.0% | |
| AAAAAGCCCGGAGCCCGGTA+GGG | - | chr1_2:59413783-59413802 | None:intergenic | 60.0% | |
| ! | TACCGGGCTCCGGGCTTTTT+CGG | + | chr1_2:59413783-59413802 | Msa0080980:intron | 60.0% |
| CGGGCCCCCGAATTAAATGC+AGG | - | chr1_2:59413861-59413880 | None:intergenic | 60.0% | |
| CAGAGCTGTCAAAACGGGCC+GGG | - | chr1_2:59413880-59413899 | None:intergenic | 60.0% | |
| GAGGCCGTGAAACCTGGCTT+TGG | + | chr1_2:59418744-59418763 | Msa0080980:intron | 60.0% | |
| CTTGAGCCAAGGCCAAAGCC+AGG | - | chr1_2:59418759-59418778 | None:intergenic | 60.0% | |
| !! | GGCTTTGGCCTTGGCTCAAG+CGG | + | chr1_2:59418759-59418778 | Msa0080980:intron | 60.0% |
| !! | GCTTTGGCCTTGGCTCAAGC+GGG | + | chr1_2:59418760-59418779 | Msa0080980:intron | 60.0% |
| ATCGGTCGCGGTCAAGGTTG+CGG | - | chr1_2:59419364-59419383 | None:intergenic | 60.0% | |
| TCACACCCTGCCAGCAGTTC+TGG | - | chr1_2:59420334-59420353 | None:intergenic | 60.0% | |
| AGAGGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412166-59412185 | Msa0080980:CDS | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | + | chr1_2:59412167-59412186 | Msa0080980:CDS | 65.0% | |
| AGCTGTCAAAACGGGCGGCC+CGG | + | chr1_2:59412942-59412961 | Msa0080980:intron | 65.0% | |
| GGAAAATTGGGGCCCGAGCC+CGG | + | chr1_2:59413024-59413043 | Msa0080980:intron | 65.0% | |
| GAAAAAGCCCGGAGCCCGGT+AGG | - | chr1_2:59413784-59413803 | None:intergenic | 65.0% | |
| !! | ACCGGGCTCCGGGCTTTTTC+GGG | + | chr1_2:59413784-59413803 | Msa0080980:intron | 65.0% |
| TAGCCCGGCCCGAAAAAGCC+CGG | - | chr1_2:59413795-59413814 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412169-59412188 | Msa0080980:CDS | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412169-59412188 | Msa0080980:CDS | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412169-59412188 | Msa0080980:CDS | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr1_2:59412169-59412188 | Msa0080980:CDS | 70.0% | |
| TTAGCCCGGGAGCCCGTGCA+GGG | - | chr1_2:59413050-59413069 | None:intergenic | 70.0% | |
| TGCACGGGCTCCCGGGCTAA+CGG | + | chr1_2:59413050-59413069 | Msa0080980:intron | 70.0% | |
| GCCCGAAAAAGCCCGGAGCC+CGG | - | chr1_2:59413788-59413807 | None:intergenic | 70.0% | |
| !!! | GGCTCCGGGCTTTTTCGGGC+CGG | + | chr1_2:59413788-59413807 | Msa0080980:intron | 70.0% |
| !!! | GCTCCGGGCTTTTTCGGGCC+GGG | + | chr1_2:59413789-59413808 | Msa0080980:intron | 70.0% |
| CAACGGCAGCTTCGCGCCAC+TGG | - | chr1_2:59415156-59415175 | None:intergenic | 70.0% | |
| GGGCAGGGTTGAACGGGCAG+AGG | + | chr1_2:59418725-59418744 | Msa0080980:intron | 70.0% | |
| CGGGCAGAGGCCGTGAAACC+TGG | + | chr1_2:59418738-59418757 | Msa0080980:intron | 70.0% | |
| TCAAAACGGGCGGCCCGGCC+CGG | + | chr1_2:59412947-59412966 | Msa0080980:intron | 75.0% | |
| AACCCGTTGCCCGACCGGGC+CGG | - | chr1_2:59412964-59412983 | None:intergenic | 75.0% | |
| GTTAGCCCGGGAGCCCGTGC+AGG | - | chr1_2:59413051-59413070 | None:intergenic | 75.0% | |
| GCACGGGCTCCCGGGCTAAC+GGG | + | chr1_2:59413051-59413070 | Msa0080980:intron | 75.0% | |
| !! | CCGGTAGGGCTAGCCCGGTC+GGG | - | chr1_2:59413769-59413788 | None:intergenic | 75.0% |
| !! | CCCGACCGGGCTAGCCCTAC+CGG | + | chr1_2:59413766-59413785 | Msa0080980:intron | 75.0% |
| !! | CCCGGTAGGGCTAGCCCGGT+CGG | - | chr1_2:59413770-59413789 | None:intergenic | 75.0% |
| !! | CCGACCGGGCTAGCCCTACC+GGG | + | chr1_2:59413767-59413786 | Msa0080980:intron | 75.0% |
| !! | GGAGCCCGGTAGGGCTAGCC+CGG | - | chr1_2:59413774-59413793 | None:intergenic | 75.0% |
| !! | GGGCTAGCCCTACCGGGCTC+CGG | + | chr1_2:59413773-59413792 | Msa0080980:intron | 75.0% |
| ! | GGCTAGCCCTACCGGGCTCC+GGG | + | chr1_2:59413774-59413793 | Msa0080980:intron | 75.0% |
| ! | ACCCGTTGCCCGACCGGGCC+GGG | - | chr1_2:59412963-59412982 | None:intergenic | 80.0% |
| ! | AGCCCGTGCAGGGCCGGGCT+CGG | - | chr1_2:59413040-59413059 | None:intergenic | 80.0% |
| !! | GGGCTCCCGGGCTAACGGGC+CGG | + | chr1_2:59413055-59413074 | Msa0080980:intron | 80.0% |
| ! | CAGGGCCGGCCCGTTAGCCC+GGG | - | chr1_2:59413063-59413082 | None:intergenic | 80.0% |
| ! | CCAGGGCCGGCCCGTTAGCC+CGG | - | chr1_2:59413064-59413083 | None:intergenic | 80.0% |
| ! | TAGCCCGGTCGGGCCTCGGG+CGG | - | chr1_2:59413759-59413778 | None:intergenic | 80.0% |
| !! | GGCTAGCCCGGTCGGGCCTC+GGG | - | chr1_2:59413762-59413781 | None:intergenic | 80.0% |
| !!! | GGGCTAGCCCGGTCGGGCCT+CGG | - | chr1_2:59413763-59413782 | None:intergenic | 80.0% |
| ! | AACGGGCGGCCCGGCCCGGT+CGG | + | chr1_2:59412951-59412970 | Msa0080980:intron | 85.0% |
| ! | GGCCCGGCCCGGTCGGGCAA+CGG | + | chr1_2:59412958-59412977 | Msa0080980:intron | 85.0% |
| ! | GCCCGGCCCGGTCGGGCAAC+GGG | + | chr1_2:59412959-59412978 | Msa0080980:intron | 85.0% |
| ! | GGCCCGAGCCCGGCCCTGCA+CGG | + | chr1_2:59413034-59413053 | Msa0080980:intron | 85.0% |
| ! | GCCCGAGCCCGGCCCTGCAC+GGG | + | chr1_2:59413035-59413054 | Msa0080980:intron | 85.0% |
| ! | GCCCGTGCAGGGCCGGGCTC+GGG | - | chr1_2:59413039-59413058 | None:intergenic | 85.0% |
| ! | CCGGGAGCCCGTGCAGGGCC+GGG | - | chr1_2:59413045-59413064 | None:intergenic | 85.0% |
| ! | CCCGGCCCTGCACGGGCTCC+CGG | + | chr1_2:59413042-59413061 | Msa0080980:intron | 85.0% |
| ! | CCCGGGAGCCCGTGCAGGGC+CGG | - | chr1_2:59413046-59413065 | None:intergenic | 85.0% |
| ! | CCGGCCCTGCACGGGCTCCC+GGG | + | chr1_2:59413043-59413062 | Msa0080980:intron | 85.0% |
| !! | CCGGGCTAACGGGCCGGCCC+TGG | + | chr1_2:59413061-59413080 | Msa0080980:intron | 85.0% |
| ! | ACGGGCGGCCCGGCCCGGTC+GGG | + | chr1_2:59412952-59412971 | Msa0080980:intron | 90.0% |
| ! | GCGGGCTTGCGGGCCGCCCG+AGG | + | chr1_2:59413743-59413762 | Msa0080980:intron | 90.0% |
| ! | CGGGCCGCCCGAGGCCCGAC+CGG | + | chr1_2:59413752-59413771 | Msa0080980:intron | 90.0% |
| ! | GGGCCGCCCGAGGCCCGACC+GGG | + | chr1_2:59413753-59413772 | Msa0080980:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 59412127 | 59421283 | 59412127 | ID=Msa0080980;Name=Msa0080980 |
| chr1_2 | mRNA | 59412127 | 59421283 | 59412127 | ID=Msa0080980-mRNA-1;Parent=Msa0080980;Name=Msa0080980-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|0|0|3|0|222 |
| chr1_2 | exon | 59412127 | 59412371 | 59412127 | ID=Msa0080980-mRNA-1:exon:19259;Parent=Msa0080980-mRNA-1 |
| chr1_2 | exon | 59416504 | 59416681 | 59416504 | ID=Msa0080980-mRNA-1:exon:19260;Parent=Msa0080980-mRNA-1 |
| chr1_2 | exon | 59421041 | 59421283 | 59421041 | ID=Msa0080980-mRNA-1:exon:19261;Parent=Msa0080980-mRNA-1 |
| chr1_2 | CDS | 59412127 | 59412371 | 59412127 | ID=Msa0080980-mRNA-1:cds;Parent=Msa0080980-mRNA-1 |
| chr1_2 | CDS | 59416504 | 59416681 | 59416504 | ID=Msa0080980-mRNA-1:cds;Parent=Msa0080980-mRNA-1 |
| chr1_2 | CDS | 59421041 | 59421283 | 59421041 | ID=Msa0080980-mRNA-1:cds;Parent=Msa0080980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
