AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0084240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084240 MtrunA17_Chr1g0198541 91.117 349 7 2 1 325 81 429 0.0 637
Msa0084240 MtrunA17_Chr1g0198531 83.573 347 33 2 1 323 81 427 0.0 549
Msa0084240 MtrunA17_Chr5g0422741 77.233 347 55 2 1 323 83 429 0.0 523
Msa0084240 MtrunA17_Chr6g0458931 56.734 349 127 2 1 325 99 447 3.44e-145 418
Msa0084240 MtrunA17_Chr2g0331721 56.941 353 127 3 1 328 104 456 1.94e-137 399
Msa0084240 MtrunA17_Chr8g0376991 53.295 349 139 2 1 325 80 428 2.89e-134 390
Msa0084240 MtrunA17_Chr7g0230011 58.523 352 122 2 1 328 87 438 1.19e-130 381
Msa0084240 MtrunA17_Chr4g0057851 51.003 349 147 2 1 325 67 415 1.26e-125 367
Msa0084240 MtrunA17_Chr6g0459011 55.014 349 133 2 1 325 42 390 2.19e-125 365
Msa0084240 MtrunA17_Chr6g0459021 55.874 349 130 2 1 325 91 439 2.15e-123 362
Msa0084240 MtrunA17_Chr6g0458921 56.000 350 129 3 1 325 71 420 5.35e-120 353
Msa0084240 MtrunA17_Chr6g0459031 55.143 350 132 3 1 325 71 420 4.98e-118 348
Msa0084240 MtrunA17_Chr2g0328081 53.541 353 139 3 1 328 71 423 1.05e-112 335
Msa0084240 MtrunA17_Chr6g0459001 49.487 390 132 3 1 325 79 468 3.53e-112 335
Msa0084240 MtrunA17_Chr3g0122921 48.011 352 141 3 1 328 90 423 9.81e-111 330
Msa0084240 MtrunA17_Chr3g0077651 48.023 354 156 4 1 326 109 462 1.47e-94 290
Msa0084240 MtrunA17_Chr3g0143701 34.722 360 197 8 1 323 141 499 3.42e-61 204
Msa0084240 MtrunA17_Chr2g0281341 33.520 358 202 8 1 323 152 508 1.67e-57 195
Msa0084240 MtrunA17_Chr5g0406331 33.038 339 186 9 1 301 143 478 4.20e-52 180
Msa0084240 MtrunA17_Chr5g0406351 32.277 347 197 7 1 310 164 509 4.22e-50 175
Msa0084240 MtrunA17_Chr4g0038711 29.348 368 215 8 1 325 127 492 1.09e-42 155
Msa0084240 MtrunA17_Chr3g0140761 31.046 306 162 9 68 325 170 474 5.64e-34 130
Msa0084240 MtrunA17_Chr3g0130641 30.719 306 165 7 61 323 163 464 1.25e-31 124
Msa0084240 MtrunA17_Chr3g0125091 28.387 310 175 7 61 326 164 470 2.87e-31 123
Msa0084240 MtrunA17_Chr8g0384661 28.889 315 168 12 59 326 179 484 7.65e-31 122
Msa0084240 MtrunA17_Chr3g0130651 30.108 279 154 7 58 297 153 429 1.61e-30 121
Msa0084240 MtrunA17_Chr1g0146491 29.000 300 164 9 68 319 160 458 4.71e-30 119
Msa0084240 MtrunA17_Chr3g0125101 27.097 310 179 6 61 326 164 470 4.85e-29 117
Msa0084240 MtrunA17_Chr3g0125081 25.649 308 185 6 61 326 164 469 5.79e-29 117
Msa0084240 MtrunA17_Chr1g0159761 29.617 287 151 8 58 297 154 436 8.03e-29 116
Msa0084240 MtrunA17_Chr5g0447221 28.339 307 176 8 64 328 162 466 1.10e-27 113
Msa0084240 MtrunA17_Chr3g0103271 27.213 305 174 6 63 323 160 460 1.44e-27 112
Msa0084240 MtrunA17_Chr5g0447231 26.923 312 176 8 60 325 155 460 6.19e-27 110
Msa0084240 MtrunA17_Chr1g0146411 26.370 292 170 6 52 298 144 435 1.03e-26 110
Msa0084240 MtrunA17_Chr1g0184721 31.200 250 142 7 61 285 142 386 2.03e-26 109
Msa0084240 MtrunA17_Chr4g0027241 27.901 362 214 12 2 325 100 452 8.57e-26 107
Msa0084240 MtrunA17_Chr1g0198081 27.528 356 214 10 2 322 119 465 1.29e-25 107
Msa0084240 MtrunA17_Chr1g0206871 27.586 290 155 6 61 297 145 432 2.85e-25 106
Msa0084240 MtrunA17_Chr3g0103211 27.778 306 173 8 67 328 159 460 4.91e-25 105
Msa0084240 MtrunA17_Chr4g0037201 26.045 311 176 9 67 326 195 502 7.23e-25 105
Msa0084240 MtrunA17_Chr3g0140541 26.132 287 168 7 78 322 172 456 2.56e-24 103
Msa0084240 MtrunA17_Chr1g0206851 25.275 364 216 13 4 323 17 368 5.99e-24 101
Msa0084240 MtrunA17_Chr3g0140531 25.914 301 175 8 67 322 160 457 9.41e-24 102
Msa0084240 MtrunA17_Chr1g0146331 25.763 295 174 5 71 322 160 452 9.74e-24 102
Msa0084240 MtrunA17_Chr1g0146391 26.688 311 179 7 58 322 140 447 2.44e-23 100
Msa0084240 MtrunA17_Chr8g0387941 26.781 351 204 11 7 319 92 427 2.51e-23 100
Msa0084240 MtrunA17_Chr1g0206831 27.707 314 164 13 70 333 40 340 3.05e-23 99.0
Msa0084240 MtrunA17_Chr2g0293331 26.230 305 184 7 58 322 140 443 5.19e-23 99.8
Msa0084240 MtrunA17_Chr3g0103231 24.425 348 211 9 3 299 85 431 5.24e-23 99.8
Msa0084240 MtrunA17_Chr3g0103221 24.727 275 163 6 67 299 166 438 4.64e-21 94.0
Msa0084240 MtrunA17_Chr3g0103251 23.952 334 176 8 42 297 9 342 2.24e-20 91.3
Msa0084240 MtrunA17_Chr5g0436281 25.575 348 230 12 1 324 30 372 1.83e-17 82.8
Msa0084240 MtrunA17_Chr4g0058161 22.353 340 242 6 5 323 100 438 5.33e-17 82.0
Msa0084240 MtrunA17_Chr3g0112971 26.781 351 218 14 1 322 83 423 1.01e-14 75.1
Msa0084240 MtrunA17_Chr3g0130661 28.144 167 101 4 173 323 2 165 1.18e-14 71.6
Msa0084240 MtrunA17_Chr1g0206821 27.933 179 98 6 173 326 349 521 1.36e-13 72.0
Msa0084240 MtrunA17_Chr5g0402151 36.111 144 84 4 59 200 124 261 8.23e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0084240 AT1G25530.1 69.452 347 82 2 1 323 84 430 8.56e-162 460
Msa0084240 AT5G40780.3 55.014 349 133 2 1 325 42 390 7.76e-138 398
Msa0084240 AT5G40780.2 55.014 349 133 2 1 325 42 390 7.76e-138 398
Msa0084240 AT5G40780.1 55.014 349 133 2 1 325 90 438 3.88e-137 398
Msa0084240 AT1G48640.1 54.155 349 136 2 1 325 97 445 2.60e-131 383
Msa0084240 AT1G67640.1 54.885 348 133 2 1 324 85 432 1.07e-122 361
Msa0084240 AT1G24400.1 53.009 349 140 2 1 325 85 433 3.44e-122 360
Msa0084240 AT1G71680.1 53.868 349 136 3 1 324 91 439 1.74e-114 340
Msa0084240 AT1G61270.1 48.711 349 153 3 1 323 90 438 7.70e-112 333
Msa0084240 AT3G01760.1 47.238 362 161 6 1 334 88 447 2.73e-106 320
Msa0084240 AT1G71680.2 53.114 273 103 3 1 248 91 363 2.97e-92 280
Msa0084240 AT1G47670.1 33.240 358 203 6 1 323 150 506 2.22e-58 197
Msa0084240 AT4G35180.1 28.571 343 204 10 1 307 114 451 3.04e-33 129
Msa0084240 AT1G58360.1 29.487 312 165 11 58 319 164 470 2.50e-30 121
Msa0084240 AT5G63850.1 27.554 323 183 7 51 326 138 456 2.69e-30 120
Msa0084240 AT5G09220.1 28.289 304 162 9 67 322 181 476 7.64e-30 120
Msa0084240 AT1G10010.2 27.089 395 224 14 3 341 90 476 5.85e-29 117
Msa0084240 AT1G10010.1 27.089 395 224 14 3 341 89 475 6.72e-29 117
Msa0084240 AT5G49630.1 29.043 303 152 9 78 326 179 472 2.80e-28 115
Msa0084240 AT1G44100.1 28.223 287 154 6 61 297 157 441 2.13e-27 112
Msa0084240 AT1G77380.1 28.364 275 151 5 67 297 165 437 2.93e-27 112
Msa0084240 AT5G23810.1 27.240 279 161 5 63 299 160 438 3.46e-25 106
Msa0084240 AT5G41800.1 26.685 356 217 11 7 325 91 439 1.11e-23 102
Msa0084240 AT1G08230.2 26.389 360 222 9 2 324 87 440 3.14e-23 100
Msa0084240 AT4G35180.2 29.469 207 118 6 1 181 114 318 6.77e-21 92.8
Msa0084240 AT1G08230.3 26.012 346 213 9 16 324 1 340 6.64e-20 90.1
Msa0084240 AT1G08230.4 26.014 296 182 7 61 324 31 321 1.14e-17 83.2
Msa0084240 AT1G08230.6 26.014 296 182 7 61 324 31 321 1.14e-17 83.2
Msa0084240 AT1G08230.5 26.014 296 182 7 61 324 31 321 1.14e-17 83.2
Msa0084240 AT3G55740.2 25.641 351 222 15 1 322 30 370 4.80e-16 79.0
Msa0084240 AT3G55740.3 25.641 351 222 15 1 322 30 370 4.80e-16 79.0
Msa0084240 AT3G55740.1 25.862 348 225 15 1 322 86 426 5.34e-16 79.3
Msa0084240 AT5G23810.2 29.121 182 106 4 63 221 160 341 6.24e-14 72.8
Msa0084240 AT2G39890.2 25.360 347 228 12 1 322 89 429 8.46e-14 72.8
Msa0084240 AT2G39890.1 25.360 347 228 12 1 322 89 429 8.46e-14 72.8
Msa0084240 AT2G39890.3 25.360 347 228 12 1 322 30 370 9.76e-14 72.0
Msa0084240 AT2G36590.1 25.460 326 212 14 1 301 83 402 5.42e-13 70.1

Find 156 sgRNAs with CRISPR-Local

Find 1039 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAATTTCAATTCTGTTTC+TGG -0.047346 1_2:-63553902 Msa0084240:CDS
CCTTTCTTTGGAGATCTTCT+TGG 0.149659 1_2:-63552811 Msa0084240:CDS
TTTCTAGGATCAACTTTAAT+TGG 0.157533 1_2:+63538956 None:intergenic
CACAAATCAAACAGTCTTAT+TGG 0.174021 1_2:-63547694 Msa0084240:three_prime_UTR
CTTGGATTCTTTGGTGGATT+TGG 0.180730 1_2:-63552793 Msa0084240:CDS
GGAGATCTTCTTGGATTCTT+TGG 0.183702 1_2:-63552802 Msa0084240:CDS
CTTGGATTCTTTGGTGGATT+TGG 0.204307 1_2:-63545300 Msa0084240:three_prime_UTR
CACTCCTTCTCTACCTTCTA+AGG 0.210993 1_2:-63548336 Msa0084240:intron
GGTGATCTACTTGGATTCTT+TGG 0.230069 1_2:-63545309 Msa0084240:three_prime_UTR
CACAAATCAAGCAGACTTAT+TGG 0.233814 1_2:-63553967 Msa0084240:CDS
ACCAGAAACAGAATTGAAAT+TGG 0.235717 1_2:+63553901 None:intergenic
ATCATTGGATATTGGACTTT+TGG 0.238047 1_2:-63545895 Msa0084240:three_prime_UTR
ACAAGCAACAGAATTGAAAT+TGG 0.243774 1_2:+63547628 None:intergenic
AAAAGACATTGGTTAAAGTT+TGG 0.245530 1_2:+63544884 None:intergenic
ACCTTAGGATATTGGGCTTT+TGG 0.273380 1_2:-63553322 Msa0084240:intron
TCAACTTTAATTGGACATTC+AGG 0.278380 1_2:+63538965 None:intergenic
TGTTGCAACCTTAGGATATT+GGG 0.286853 1_2:-63553329 Msa0084240:intron
CCATTCTTTGGTGATCTACT+TGG 0.288263 1_2:-63545318 Msa0084240:three_prime_UTR
CAGTTGATGCTGAATTTCTT+TGG 0.293533 1_2:+63545119 None:intergenic
ATTGCAACATCATGCACTTT+AGG 0.299155 1_2:+63544911 None:intergenic
ACAATCCATGCTCCAAGTTT+TGG 0.304672 1_2:+63554094 None:intergenic
CTGTTGCAACCTTAGGATAT+TGG 0.307911 1_2:-63553330 Msa0084240:intron
AAAGACATTGGTTAAAGTTT+GGG 0.311021 1_2:+63544885 None:intergenic
CAAATATCATTTGCATTTGC+TGG 0.313692 1_2:-63546045 Msa0084240:three_prime_UTR
TATTGCTTCTGCTAATTTGA+TGG 0.317012 1_2:-63553248 Msa0084240:CDS
TTCCACATTGCTATCTTTGA+TGG 0.317361 1_2:+63545970 None:intergenic
GCATATTGCATTGATGAAAT+AGG 0.318360 1_2:+63545933 None:intergenic
CAAGGATACCAAAGGGAAAA+AGG 0.318994 1_2:-63538888 Msa0084240:three_prime_UTR
GCATCAACTGGTTCATCAAT+TGG 0.320001 1_2:-63545106 Msa0084240:three_prime_UTR
CAGTTGCAATCATTGGATAT+TGG 0.324782 1_2:-63545903 Msa0084240:three_prime_UTR
ACAATCCATGCACCAAGTTT+TGG 0.330112 1_2:+63547821 None:intergenic
ATGGTATTCATCAATGTTCT+TGG 0.332372 1_2:-63553229 Msa0084240:CDS
CAGCATCTGTGATGTCATTA+AGG 0.339444 1_2:-63553868 Msa0084240:intron
CAGCAGCTGCGATGTCATTA+AGG 0.342052 1_2:-63547595 Msa0084240:intron
GTATCAACTGGTTCATCAAT+TGG 0.343957 1_2:-63552606 Msa0084240:CDS
GATCTTGGTAGACATGCTTT+TGG 0.349503 1_2:-63547845 Msa0084240:three_prime_UTR
GATCTTGGTAGACATGCTTT+TGG 0.349503 1_2:-63554118 Msa0084240:CDS
GATATTGTGTATATGGTTAT+TGG 0.350704 1_2:-63547764 Msa0084240:three_prime_UTR
AGCAGTGACACTTGAAATTC+AGG 0.357234 1_2:-63553446 Msa0084240:CDS
TGTCACTTGAAAGACCTTCA+TGG 0.357587 1_2:-63553273 Msa0084240:CDS
TGACTTGGAATTACCTTAGA+AGG 0.368429 1_2:+63548323 None:intergenic
CAATATCCAATGATTGCAAC+TGG 0.369765 1_2:+63545904 None:intergenic
TATTGCCTCTGCTAACTTGA+TGG 0.384313 1_2:-63545821 Msa0084240:three_prime_UTR
TTCGATCGATATATTGATCT+TGG 0.392177 1_2:-63547860 Msa0084240:three_prime_UTR
TTCGATCGATATATTGATCT+TGG 0.392177 1_2:-63554133 Msa0084240:CDS
CATAGCTAACATTGTCAATT+CGG 0.392756 1_2:+63546124 None:intergenic
GAGGGTTTCTCAGGTGTTGA+TGG 0.395501 1_2:+63553415 None:intergenic
TATTTCCCAGTTGCAATCAT+TGG 0.396525 1_2:-63545910 Msa0084240:three_prime_UTR
CCCTCAATCAAGTCGAAAAC+AGG 0.411781 1_2:+63553041 None:intergenic
GATCTTCTTGGATTCTTTGG+TGG 0.413994 1_2:-63552799 Msa0084240:CDS
TGGGTGTGATATTGTGTATA+TGG 0.422852 1_2:-63547771 Msa0084240:three_prime_UTR
GATCTACTTGGATTCTTTGG+TGG 0.436617 1_2:-63545306 Msa0084240:three_prime_UTR
CATAGGTGTGTGTATTATGT+TGG 0.442281 1_2:-63552443 Msa0084240:CDS
ATGGTATTCATCCATGTTGT+TGG 0.447247 1_2:-63545802 Msa0084240:three_prime_UTR
AGTAACAACATCAAGATTCC+TGG 0.451837 1_2:+63547953 None:intergenic
GGTATCTTCGAGGGTTTCTC+AGG 0.454646 1_2:+63553406 None:intergenic
TTCAGAGTCTTCAGTGCACT+TGG 0.458661 1_2:-63553496 Msa0084240:CDS
CAAAGAAATTCAGCATCAAC+TGG 0.459192 1_2:-63545118 Msa0084240:three_prime_UTR
CAGCTACATGAATGCGTACC+GGG 0.459383 1_2:-63554163 Msa0084240:CDS
AGGGTGTGACACTGTCTATA+TGG 0.460328 1_2:-63554044 Msa0084240:intron
TATCGATCGAAACGAGTTCC+CGG 0.464202 1_2:+63547872 None:intergenic
TATCAACTGGTTCATCAATT+GGG 0.465212 1_2:-63552605 Msa0084240:intron
CATCAACTGGTTCATCAATT+GGG 0.466386 1_2:-63545105 Msa0084240:intron
CCAGAAACAGAATTGAAATT+GGG 0.476787 1_2:+63553902 None:intergenic
CCGGTACACATTCATGTAGC+TGG 0.479177 1_2:+63547891 None:intergenic
TTTCCACATTGGTATCTTCG+AGG 0.480554 1_2:+63553396 None:intergenic
ATTATCAACCACATTATACT+AGG 0.481623 1_2:+63552649 None:intergenic
CAAGCAACAGAATTGAAATT+GGG 0.483302 1_2:+63547629 None:intergenic
CAAGGAGATTCAGTATCAAC+TGG 0.484016 1_2:-63552618 Msa0084240:CDS
AGCAACTGATTGTACAAGTT+GGG 0.485034 1_2:-63547790 Msa0084240:three_prime_UTR
CATAGGTGTATGTATTATGC+TGG 0.485146 1_2:-63544994 Msa0084240:three_prime_UTR
CCAAGTAGATCACCAAAGAA+TGG 0.488148 1_2:+63545318 None:intergenic
CCAAGAAGATCTCCAAAGAA+AGG 0.493985 1_2:+63552811 None:intergenic
ATGTTGGCATCTACAATTGG+TGG 0.495108 1_2:-63552427 Msa0084240:CDS
GAATTGTAGCTTGGATTTCA+AGG 0.495589 1_2:+63546010 None:intergenic
ATTATGTTGGCATCTACAAT+TGG 0.496034 1_2:-63552430 Msa0084240:CDS
CATAAAGTAGCACATGTTGA+AGG 0.497732 1_2:-63544800 Msa0084240:three_prime_UTR
GAATTTCAAGTGTCACTGCT+TGG 0.504427 1_2:+63553449 None:intergenic
CCATGTTGTTGGTAGCTACC+AGG 0.505264 1_2:-63545791 Msa0084240:intron
TCTTGATGTTGTTACTATCA+TGG 0.511806 1_2:-63547946 Msa0084240:CDS
TTTCAGGCTGGAATTTACAT+AGG 0.516907 1_2:-63545011 Msa0084240:intron
ATTATCATCCACATTATGCT+AGG 0.517258 1_2:+63545149 None:intergenic
TCTTCTATATGTAGGGGTCC+AGG 0.517342 1_2:-63547971 Msa0084240:intron
CAATGTTCTTGGTAGCTACC+AGG 0.519841 1_2:-63553218 Msa0084240:intron
CAGCAACTGATTGTACAAGT+TGG 0.521805 1_2:-63547791 Msa0084240:three_prime_UTR
TTCAGAGTCTTCAATGCACT+TGG 0.526535 1_2:-63546069 Msa0084240:three_prime_UTR
CATCTACAATTGGTGGCTTG+AGG 0.526894 1_2:-63552420 Msa0084240:CDS
TGCCATCTTACCTACATAAG+CGG 0.532685 1_2:+63552959 None:intergenic
ATGCTGGCATCAACAGTTGG+TGG 0.536115 1_2:-63544978 Msa0084240:three_prime_UTR
TTCCACATTGGTATCTTCGA+GGG 0.537636 1_2:+63553397 None:intergenic
GTAGCTCGATCTGCTTATGT+AGG 0.537760 1_2:-63545462 Msa0084240:intron
CCAGCTACATGAATGTGTAC+CGG 0.539689 1_2:-63547891 Msa0084240:exon
CTTAGAAGGTAGAGAAGGAG+TGG 0.541211 1_2:+63548337 None:intergenic
TTGGACCAAAACTTGGTGCA+TGG 0.543626 1_2:-63547826 Msa0084240:three_prime_UTR
AGCAACTGATTGTACAAGTA+GGG 0.545504 1_2:-63554063 Msa0084240:CDS
GCAGTTATTCAACTATAGCA+TGG 0.546994 1_2:-63546167 Msa0084240:intron
AATTGTAGCTTGGATTTCAA+GGG 0.551783 1_2:+63546011 None:intergenic
TTGGACCAAAACTTGGAGCA+TGG 0.552103 1_2:-63554099 Msa0084240:CDS
TGAAACTGCAAGGATACCAA+AGG 0.552215 1_2:-63538896 Msa0084240:three_prime_UTR
CAGCTACATGAATGTGTACC+GGG 0.552607 1_2:-63547890 Msa0084240:exon
GCAGAGGCAATAAGCCATGA+AGG 0.552923 1_2:+63545832 None:intergenic
TGGCTTGCTTATCTAGAGGT+CGG 0.553665 1_2:-63553570 Msa0084240:CDS
GAGCCTTACAAAATATGAAG+TGG 0.554960 1_2:+63545269 None:intergenic
CATCAACAGTTGGTGGCTTG+AGG 0.555996 1_2:-63544971 Msa0084240:three_prime_UTR
TTTCAGGCTGCAATTTGCAT+AGG 0.556529 1_2:-63552460 Msa0084240:intron
CAGCAACTGATTGTACAAGT+AGG 0.557637 1_2:-63554064 Msa0084240:CDS
GCAGAAGCAATAAGCCATGA+AGG 0.558496 1_2:+63553259 None:intergenic
TTCAGCTTCCTAGCATAATG+TGG 0.559564 1_2:-63545157 Msa0084240:intron
TACAAGTCTAAGCGCTACAC+CGG 0.559820 1_2:+63545482 None:intergenic
CCAGCTACATGAATGCGTAC+CGG 0.560451 1_2:-63554164 None:intergenic
GAAACTGCAAGGATACCAAA+GGG 0.563555 1_2:-63538895 Msa0084240:three_prime_UTR
ACATGTTGAAGGCATAGTCT+AGG 0.567532 1_2:-63544789 Msa0084240:three_prime_UTR
GCAGCTATTCAACTATAGCA+TGG 0.567758 1_2:-63553594 Msa0084240:intron
CGACTTGATTGAGGGGACGA+TGG 0.567976 1_2:-63553033 Msa0084240:CDS
CAGTTGATACTGAATCTCCT+TGG 0.572840 1_2:+63552619 None:intergenic
TTCAGCTTCCTAGTATAATG+TGG 0.573976 1_2:-63552657 Msa0084240:intron
GTGTCTTACAAAATATGAAG+TGG 0.575151 1_2:+63552762 None:intergenic
CAAATAGCACCTTTCCACAT+TGG 0.577846 1_2:+63553385 None:intergenic
GTAGCTCGATCCGCTTATGT+AGG 0.579192 1_2:-63552969 Msa0084240:intron
CGAAGATTGAACTTCCCTCC+CGG 0.581202 1_2:-63545501 Msa0084240:three_prime_UTR
CTGTTTGATTTGTGTACAGT+CGG 0.583645 1_2:+63547703 None:intergenic
TTAGGTGTAGAAACTATAAG+TGG 0.584367 1_2:+63544929 None:intergenic
CTATTCAACTATAGCATGGG+TGG 0.588940 1_2:-63553590 Msa0084240:CDS
CAGCTATTCAACTATAGCAT+GGG 0.589525 1_2:-63553593 Msa0084240:CDS
TGTCTTACAAAATATGAAGT+GGG 0.591229 1_2:+63552763 None:intergenic
ATTACCTTAGAAGGTAGAGA+AGG 0.592632 1_2:+63548332 None:intergenic
GAAGTGTCTAAAGCAGTTTG+TGG 0.595626 1_2:-63547738 Msa0084240:three_prime_UTR
GTGTTGATGGAATTGTAGCT+TGG 0.599762 1_2:+63546001 None:intergenic
AGTCTAAGCGCTACACTAGG+AGG 0.600415 1_2:+63552993 None:intergenic
TTATTCAACTATAGCATGGG+TGG 0.600432 1_2:-63546163 Msa0084240:three_prime_UTR
ATTGTGTATATGGTTATTGG+TGG 0.601442 1_2:-63547761 Msa0084240:three_prime_UTR
CAGTTATTCAACTATAGCAT+GGG 0.604003 1_2:-63546166 Msa0084240:three_prime_UTR
GGTTGATAATCAAGAAGCCA+AGG 0.608652 1_2:-63552636 Msa0084240:CDS
TATCGATCGAAACGAGTCCC+CGG 0.616622 1_2:+63554145 None:intergenic
ACAAGTCTAAGCGCTACACT+AGG 0.618313 1_2:+63552990 None:intergenic
AGCCTTACAAAATATGAAGT+GGG 0.619496 1_2:+63545270 None:intergenic
CCTGGTAGCTACCAACAACA+TGG 0.622390 1_2:+63545791 None:intergenic
GTCTAAGCGCTACACTAGGA+GGG 0.622626 1_2:+63552994 None:intergenic
TCAAAGATAGCAATGTGGAA+TGG 0.633739 1_2:-63545967 Msa0084240:three_prime_UTR
TGGGTGGCTTGCTTATCTAG+AGG 0.637440 1_2:-63546147 Msa0084240:three_prime_UTR
GTCTAAGCGCTACACCGGGA+GGG 0.638037 1_2:+63545487 None:intergenic
TGGGTGGCTTGCTTATCTAG+AGG 0.642172 1_2:-63553574 Msa0084240:CDS
ACTTGTACAATCAGTTGCTG+AGG 0.643469 1_2:+63554067 None:intergenic
ACTTGTACAATCAGTTGCTG+AGG 0.645642 1_2:+63547794 None:intergenic
AATATCCAATGATTGCAACT+GGG 0.647290 1_2:+63545905 None:intergenic
TTGTGTATATGGTTATTGGT+GGG 0.647932 1_2:-63547760 Msa0084240:three_prime_UTR
AATCAAGTCGAAAACAGGCA+TGG 0.649483 1_2:+63553046 None:intergenic
GTTTAACATTAAACACAATG+TGG 0.657281 1_2:-63547922 Msa0084240:CDS
TCGAAGATACCAATGTGGAA+AGG 0.658287 1_2:-63553394 Msa0084240:intron
ACAAGTCTAAGCGCTACACC+GGG 0.666755 1_2:+63545483 None:intergenic
GAATACCATCAAGTTAGCAG+AGG 0.672919 1_2:+63545816 None:intergenic
ATTATGCTGGCATCAACAGT+TGG 0.680435 1_2:-63544981 Msa0084240:three_prime_UTR
AGTCTAAGCGCTACACCGGG+AGG 0.683026 1_2:+63545486 None:intergenic
AGCTACATGAATGCGTACCG+GGG 0.693406 1_2:-63554162 Msa0084240:CDS
AACCATCAAAGATAGCAATG+TGG 0.720124 1_2:-63545972 Msa0084240:three_prime_UTR
AACCCTCGAAGATACCAATG+TGG 0.741718 1_2:-63553399 Msa0084240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTTTATTTTTTT+TGG - chr1_2:63542942-63542961 Msa0084240:intron 0.0%
!! AAATTATATTAGTATATGAT+AGG - chr1_2:63539279-63539298 Msa0084240:intron 10.0%
!! TAAAATCATATTATATAGTA+AGG + chr1_2:63539422-63539441 None:intergenic 10.0%
!!! TAATTAGAGTTTTAATTTTA+AGG - chr1_2:63541777-63541796 Msa0084240:intron 10.0%
!! ATTTACTCTTAATTTAAAAA+AGG - chr1_2:63543161-63543180 Msa0084240:intron 10.0%
!! TAATTTAAAAAAGGAAAAAA+AGG - chr1_2:63543170-63543189 Msa0084240:intron 10.0%
!! AATTTAAAAAAGGAAAAAAA+GGG - chr1_2:63543171-63543190 Msa0084240:intron 10.0%
!!! CAATTAAGTTAATATTATTT+TGG + chr1_2:63544195-63544214 None:intergenic 10.0%
!!! TATAATATTTTTTTTTGACA+TGG - chr1_2:63544748-63544767 Msa0084240:three_prime_UTR 10.0%
!!! TAACTTTTTTTTATAAGTTT+TGG - chr1_2:63545847-63545866 Msa0084240:three_prime_UTR 10.0%
!!! GTTTTGTTAATAAAAAAAAA+AGG - chr1_2:63546406-63546425 Msa0084240:intron 10.0%
!!! CATTTTTTTTTTTTTTTTGA+AGG - chr1_2:63552933-63552952 Msa0084240:intron 10.0%
!!! ACTTATTTGAATTTGTTTTA+TGG + chr1_2:63539368-63539387 None:intergenic 15.0%
!! TTAAATAATTCTTCTATAAG+CGG + chr1_2:63540130-63540149 None:intergenic 15.0%
!! TTGAAACAAAAAAAAATACA+GGG + chr1_2:63540793-63540812 None:intergenic 15.0%
!!! TTTGAAACAAAAAAAAATAC+AGG + chr1_2:63540794-63540813 None:intergenic 15.0%
!!! CTTTTAATTTTTTGTTTGAA+TGG - chr1_2:63541699-63541718 Msa0084240:intron 15.0%
!! TTGAAACAAAAAAAATATAC+AGG - chr1_2:63542195-63542214 Msa0084240:intron 15.0%
!! TGAAACAAAAAAAATATACA+GGG - chr1_2:63542196-63542215 Msa0084240:intron 15.0%
!! GATTCATCATAATAAAAAAA+AGG + chr1_2:63542271-63542290 None:intergenic 15.0%
!! AAAATTCCAATATAAATGTA+AGG + chr1_2:63542545-63542564 None:intergenic 15.0%
!!! TTGGAATTTTTAAATTCAAA+AGG - chr1_2:63542555-63542574 Msa0084240:intron 15.0%
!!! TAAAAACTTACCAAATTTTT+TGG + chr1_2:63543127-63543146 None:intergenic 15.0%
!!! AAAAAATTTGGTAAGTTTTT+AGG - chr1_2:63543126-63543145 Msa0084240:intron 15.0%
!!! AAAAATTTGGTAAGTTTTTA+GGG - chr1_2:63543127-63543146 Msa0084240:intron 15.0%
!!! TAATTGTTATTGTGATTATA+TGG - chr1_2:63543319-63543338 Msa0084240:intron 15.0%
!!! TTTTTTAATTTTTGAGTGAT+GGG + chr1_2:63544003-63544022 None:intergenic 15.0%
!!! TTTTTTTAATTTTTGAGTGA+TGG + chr1_2:63544004-63544023 None:intergenic 15.0%
!! TTAATTAATGTGTAATGTAA+AGG + chr1_2:63544078-63544097 None:intergenic 15.0%
!! CATACATATAAGAAAAAAAT+AGG - chr1_2:63545032-63545051 Msa0084240:intron 15.0%
!!! ACTTTCTATTTTTCTTTTTT+GGG + chr1_2:63545618-63545637 None:intergenic 15.0%
!!! TACTTTCTATTTTTCTTTTT+TGG + chr1_2:63545619-63545638 None:intergenic 15.0%
!! ATTAAATTATAGCTACAAAT+AGG - chr1_2:63546710-63546729 Msa0084240:intron 15.0%
!!! CTTAAATTTTCTTTTCTAAT+CGG - chr1_2:63547449-63547468 Msa0084240:intron 15.0%
!!! AGAATTATTATTTTCATGAT+AGG - chr1_2:63547649-63547668 Msa0084240:three_prime_UTR 15.0%
!! AAAACTAAAAAGTCAATTAT+TGG - chr1_2:63547846-63547865 Msa0084240:three_prime_UTR 15.0%
!!! ATATTTTGTACTATTTTGAA+AGG - chr1_2:63548824-63548843 Msa0084240:intron 15.0%
!!! TTTACAATTTCTGAAAATTT+TGG - chr1_2:63553228-63553247 Msa0084240:CDS 15.0%
!!! TTACAATTTCTGAAAATTTT+GGG - chr1_2:63553229-63553248 Msa0084240:CDS 15.0%
!!! ACTTATTGGATTATGATTTT+TGG - chr1_2:63539086-63539105 Msa0084240:intron 20.0%
!!! TGTAACTATAGAATTTTTCT+GGG + chr1_2:63539260-63539279 None:intergenic 20.0%
!!! TTGTAACTATAGAATTTTTC+TGG + chr1_2:63539261-63539280 None:intergenic 20.0%
!! TTATGGAAAAGAATAAATGT+TGG + chr1_2:63539324-63539343 None:intergenic 20.0%
!!! ATTCTTTTCCATAAAGTATT+TGG - chr1_2:63539330-63539349 Msa0084240:intron 20.0%
!! AAATCAATCCAAATACTTTA+TGG + chr1_2:63539341-63539360 None:intergenic 20.0%
!!! AAATTTTCATTTCTGATCAA+TGG - chr1_2:63539945-63539964 Msa0084240:intron 20.0%
!!! AATTTTCATTTCTGATCAAT+GGG - chr1_2:63539946-63539965 Msa0084240:intron 20.0%
!!! TCAGCTTTTACATTATTATT+TGG - chr1_2:63540195-63540214 Msa0084240:intron 20.0%
!!! CAGCTTTTACATTATTATTT+GGG - chr1_2:63540196-63540215 Msa0084240:intron 20.0%
!!! AGCTTTTACATTATTATTTG+GGG - chr1_2:63540197-63540216 Msa0084240:intron 20.0%
!! TTAGGTATAGAAATTATAAG+TGG + chr1_2:63540664-63540683 None:intergenic 20.0%
!!! AAGATTGTAGAGTTTTAATT+GGG + chr1_2:63541095-63541114 None:intergenic 20.0%
!!! AAAGATTGTAGAGTTTTAAT+TGG + chr1_2:63541096-63541115 None:intergenic 20.0%
!!! TAATTTTTTGTTTGAATGGT+TGG - chr1_2:63541703-63541722 Msa0084240:intron 20.0%
!! ATGAATAAGAAAAAAACAGT+GGG - chr1_2:63541957-63541976 Msa0084240:intron 20.0%
!! GAAACAAAAAAAATATACAG+GGG - chr1_2:63542197-63542216 Msa0084240:intron 20.0%
!!! TGAAATTTGGTAGTTTTTTA+GGG + chr1_2:63542337-63542356 None:intergenic 20.0%
!!! ATGAAATTTGGTAGTTTTTT+AGG + chr1_2:63542338-63542357 None:intergenic 20.0%
!!! AAAATCATGTCATTTTTCAA+GGG + chr1_2:63542369-63542388 None:intergenic 20.0%
!!! GTAGAAATTTTTTTTCTGTA+GGG + chr1_2:63542394-63542413 None:intergenic 20.0%
!!! GAGCTCTAAATTTTATTTTT+AGG - chr1_2:63542511-63542530 Msa0084240:intron 20.0%
!! AACATTCCTTACATTTATAT+TGG - chr1_2:63542536-63542555 Msa0084240:intron 20.0%
!!! ATGTCACTTTATACTAAATT+TGG - chr1_2:63543017-63543036 Msa0084240:intron 20.0%
!! ATAAAAATATGCAAGATTCA+GGG - chr1_2:63543083-63543102 Msa0084240:intron 20.0%
!! ATGATGAGTTTATATTATGT+TGG + chr1_2:63543544-63543563 None:intergenic 20.0%
!! CTTATAAGATATGAACTAAA+TGG - chr1_2:63543614-63543633 Msa0084240:intron 20.0%
!!! AAAACATATTTTTCGAACTA+AGG - chr1_2:63543720-63543739 Msa0084240:intron 20.0%
!! ATCATTAACTCAAAATTTAG+TGG - chr1_2:63543882-63543901 Msa0084240:intron 20.0%
!!! AAACTTCACTTTTTTTTAGT+GGG + chr1_2:63544154-63544173 None:intergenic 20.0%
!!! ATATTATTTTGGTAGTGTTA+GGG + chr1_2:63544184-63544203 None:intergenic 20.0%
!!! AATATTATTTTGGTAGTGTT+AGG + chr1_2:63544185-63544204 None:intergenic 20.0%
!! TCCATCATAAAAATTATTCT+TGG - chr1_2:63544227-63544246 Msa0084240:intron 20.0%
!!! ACCAAGAATAATTTTTATGA+TGG + chr1_2:63544231-63544250 None:intergenic 20.0%
!! CATAAAAATTATTCTTGGTT+AGG - chr1_2:63544232-63544251 Msa0084240:intron 20.0%
!! AATTAAAGCAAGATTATCTT+AGG + chr1_2:63544380-63544399 None:intergenic 20.0%
!! ATAATCTTGCTTTAATTGTT+GGG - chr1_2:63544383-63544402 Msa0084240:intron 20.0%
!!! TCTTATTGGATTTTGATTTT+TGG - chr1_2:63545359-63545378 Msa0084240:intron 20.0%
!! TTTGATTATTTATTACTCCT+TGG - chr1_2:63545523-63545542 Msa0084240:three_prime_UTR 20.0%
!!! TGACATTTTATATTCATACA+AGG - chr1_2:63545563-63545582 Msa0084240:intron 20.0%
!!! AATTAATCATTTCTAGTTGT+TGG + chr1_2:63545670-63545689 None:intergenic 20.0%
!!! TTTTAATAGTGTTTGTACTA+TGG - chr1_2:63545794-63545813 Msa0084240:three_prime_UTR 20.0%
!!! TTTTGGTAGATATTTATGTT+GGG - chr1_2:63545864-63545883 Msa0084240:three_prime_UTR 20.0%
!!! GGTATCATAATATATTGATT+CGG - chr1_2:63546145-63546164 Msa0084240:three_prime_UTR 20.0%
!!! GTATCATAATATATTGATTC+GGG - chr1_2:63546146-63546165 Msa0084240:three_prime_UTR 20.0%
!! GTAAAGTAAATTGTTGAAAT+TGG + chr1_2:63546326-63546345 None:intergenic 20.0%
!!! AGTTTGCTATTTCATAAATT+TGG - chr1_2:63546433-63546452 Msa0084240:intron 20.0%
!!! ATTAAATCAATTTTGCTGAT+TGG + chr1_2:63546949-63546968 None:intergenic 20.0%
!!! ACAATATTTTCACAAATTTG+AGG + chr1_2:63547300-63547319 None:intergenic 20.0%
!! GTTGGGTAAAAATATATTAT+AGG - chr1_2:63547471-63547490 Msa0084240:intron 20.0%
!! AAACAAGTCTTAAATTTCTT+TGG + chr1_2:63547975-63547994 None:intergenic 20.0%
!! ACTAAAAAACTAAAAGACAT+TGG + chr1_2:63548169-63548188 None:intergenic 20.0%
!! ACTTATTGTAAATAATAGAG+TGG - chr1_2:63548567-63548586 Msa0084240:intron 20.0%
!!! AATCTTTAAAATTGGAGATT+TGG + chr1_2:63548921-63548940 None:intergenic 20.0%
!!! AGACAACAAATCTTTAAAAT+TGG + chr1_2:63548929-63548948 None:intergenic 20.0%
!!! TTAAGTTCTTAAGTCATTTT+TGG + chr1_2:63549345-63549364 None:intergenic 20.0%
!!! TTATCTTGATAATAATGAGA+AGG - chr1_2:63552454-63552473 Msa0084240:CDS 20.0%
!! TAATAATAGCACTAAAAGAA+AGG - chr1_2:63553054-63553073 Msa0084240:CDS 20.0%
!!! AAAAAATCACAATTTTCAAC+AGG - chr1_2:63553085-63553104 Msa0084240:intron 20.0%
!!! AAAAATCACAATTTTCAACA+GGG - chr1_2:63553086-63553105 Msa0084240:intron 20.0%
!! TTTGCAATTTCAAAAAATAC+AGG - chr1_2:63553143-63553162 Msa0084240:intron 20.0%
!! TTGCAATTTCAAAAAATACA+GGG - chr1_2:63553144-63553163 Msa0084240:intron 20.0%
!!! TTTTGCAATTTATGAAAGTT+AGG - chr1_2:63553200-63553219 Msa0084240:intron 20.0%
!! TTTGCAATTTATGAAAGTTA+GGG - chr1_2:63553201-63553220 Msa0084240:intron 20.0%
!!! TACAATTTCTGAAAATTTTG+GGG - chr1_2:63553230-63553249 Msa0084240:CDS 20.0%
!!! TTTGTAATTTCTAGGAATTT+TGG - chr1_2:63553287-63553306 Msa0084240:CDS 20.0%
!!! TTGTAATTTCTAGGAATTTT+GGG - chr1_2:63553288-63553307 Msa0084240:CDS 20.0%
!! ACTTATTGTAAATAATAGAG+TGG - chr1_2:63548567-63548586 Msa0084240:intron 20.0%
!!! TATTGGATTATGATTTTTGG+TGG - chr1_2:63539089-63539108 Msa0084240:intron 25.0%
!!! GCATATTGCATTGATTAAAT+AGG + chr1_2:63539682-63539701 None:intergenic 25.0%
!! ATTTTCATTTCTGATCAATG+GGG - chr1_2:63539947-63539966 Msa0084240:intron 25.0%
! TGTCTTACAAAATATGAAGT+GGG + chr1_2:63540279-63540298 None:intergenic 25.0%
! AAAATTTGACATAAGCATAG+AGG + chr1_2:63540319-63540338 None:intergenic 25.0%
! ATTATCAACCACATTATACT+AGG + chr1_2:63540393-63540412 None:intergenic 25.0%
! AATTACGTTTCTTTCATTTC+AGG - chr1_2:63540563-63540582 Msa0084240:intron 25.0%
!! AAAGACATTGGTTAAAGTTT+GGG + chr1_2:63540709-63540728 None:intergenic 25.0%
!! TAAAGACATTGGTTAAAGTT+TGG + chr1_2:63540710-63540729 None:intergenic 25.0%
! CCTAAAAAAAGTAAAGACAT+TGG + chr1_2:63540721-63540740 None:intergenic 25.0%
!!! CCAATGTCTTTACTTTTTTT+AGG - chr1_2:63540718-63540737 Msa0084240:intron 25.0%
! GATGAAGAAGAAAAAATAGA+GGG + chr1_2:63541046-63541065 None:intergenic 25.0%
! AGATGAAGAAGAAAAAATAG+AGG + chr1_2:63541047-63541066 None:intergenic 25.0%
!!! AGATTGTAGAGTTTTAATTG+GGG + chr1_2:63541094-63541113 None:intergenic 25.0%
! GTTTATTTATGTTCATGTTG+TGG + chr1_2:63541170-63541189 None:intergenic 25.0%
! TAACACAAAATGGGAAAAAT+GGG + chr1_2:63541192-63541211 None:intergenic 25.0%
! ATAACACAAAATGGGAAAAA+TGG + chr1_2:63541193-63541212 None:intergenic 25.0%
! AAATGGGTATAACACAAAAT+GGG + chr1_2:63541201-63541220 None:intergenic 25.0%
! AAAATGGGTATAACACAAAA+TGG + chr1_2:63541202-63541221 None:intergenic 25.0%
!! GTTTACTCATGTTGTTTATT+TGG + chr1_2:63541248-63541267 None:intergenic 25.0%
! TCAAGTTTGAAGATTAATGA+AGG + chr1_2:63541294-63541313 None:intergenic 25.0%
! TCGGAAAAGAAAATAATTGA+AGG - chr1_2:63541448-63541467 Msa0084240:intron 25.0%
! AGAAAATAATTGAAGGAACA+TGG - chr1_2:63541455-63541474 Msa0084240:intron 25.0%
!!! TTGCTTTGTTTGCATTTTTT+GGG - chr1_2:63541815-63541834 Msa0084240:intron 25.0%
! TTGAATATGAATTGGATTTG+TGG - chr1_2:63541904-63541923 Msa0084240:intron 25.0%
! GATGAATAAGAAAAAAACAG+TGG - chr1_2:63541956-63541975 Msa0084240:intron 25.0%
!!! AAATCATGTCATTTTTCAAG+GGG + chr1_2:63542368-63542387 None:intergenic 25.0%
!!! CAAAATCATGTCATTTTTCA+AGG + chr1_2:63542370-63542389 None:intergenic 25.0%
!!! CGTAGAAATTTTTTTTCTGT+AGG + chr1_2:63542395-63542414 None:intergenic 25.0%
!!! AGAGCTCAAATTTTTTTTTG+AGG + chr1_2:63542498-63542517 None:intergenic 25.0%
! ACTATGTTTGAAAATTGTGT+AGG - chr1_2:63542985-63543004 Msa0084240:intron 25.0%
! CATAAAAATATGCAAGATTC+AGG - chr1_2:63543082-63543101 Msa0084240:intron 25.0%
!!! AAACTTACCAAATTTTTTGG+TGG + chr1_2:63543124-63543143 None:intergenic 25.0%
! ACATTATATAAGATGTGCAT+CGG + chr1_2:63543384-63543403 None:intergenic 25.0%
! TGTGTGAAAAATTGACAAAA+GGG + chr1_2:63543409-63543428 None:intergenic 25.0%
!! CATTTCACTTCTTATTTGAT+TGG + chr1_2:63543493-63543512 None:intergenic 25.0%
! GAGTTTATATTATGTTGGAA+TGG + chr1_2:63543539-63543558 None:intergenic 25.0%
!!! ATGTTTTAAAGAGTTACCTT+AGG + chr1_2:63543707-63543726 None:intergenic 25.0%
! TAGTAGAAAAACAATTCTAG+TGG - chr1_2:63543802-63543821 Msa0084240:intron 25.0%
! GAGTTAATGATTAAACTTTG+TGG + chr1_2:63543873-63543892 None:intergenic 25.0%
!! ACATTTTATTGGTAAGTGAA+AGG + chr1_2:63543979-63543998 None:intergenic 25.0%
!!! AACTTCACTTTTTTTTAGTG+GGG + chr1_2:63544153-63544172 None:intergenic 25.0%
!!! GAAACTTCACTTTTTTTTAG+TGG + chr1_2:63544155-63544174 None:intergenic 25.0%
! TATTACTCCAAACTATATAC+AGG - chr1_2:63544272-63544291 Msa0084240:intron 25.0%
! GAAATAGAATCAAATACTGA+TGG - chr1_2:63544344-63544363 Msa0084240:intron 25.0%
! GATAATCTTGCTTTAATTGT+TGG - chr1_2:63544382-63544401 Msa0084240:intron 25.0%
! TTTAATTGTTGGGTTTAAAG+TGG - chr1_2:63544393-63544412 Msa0084240:intron 25.0%
! AATGAACAAGTTTCAATGAA+AGG + chr1_2:63544424-63544443 None:intergenic 25.0%
! ATATATATATGTGTGAGTAG+AGG + chr1_2:63544600-63544619 None:intergenic 25.0%
! TTATCTTGTCTTCTATATGT+AGG - chr1_2:63545060-63545079 Msa0084240:intron 25.0%
! TATCTTGTCTTCTATATGTA+GGG - chr1_2:63545061-63545080 Msa0084240:intron 25.0%
! GTTTAACATTAAACACAATG+TGG - chr1_2:63545117-63545136 Msa0084240:three_prime_UTR 25.0%
! GATATTGTGTATATGGTTAT+TGG - chr1_2:63545275-63545294 Msa0084240:intron 25.0%
!!! TATTGGATTTTGATTTTTGG+TGG - chr1_2:63545362-63545381 Msa0084240:intron 25.0%
!! TTATATTCATACAAGGTACT+AGG - chr1_2:63545570-63545589 Msa0084240:intron 25.0%
!! TATATTCATACAAGGTACTA+GGG - chr1_2:63545571-63545590 Msa0084240:intron 25.0%
!!! TTCATTAACTTCAGCTTTTT+TGG - chr1_2:63545703-63545722 Msa0084240:intron 25.0%
!!! GTTTTGGTAGATATTTATGT+TGG - chr1_2:63545863-63545882 Msa0084240:three_prime_UTR 25.0%
!! TAGTCATATCTTTTCAATCT+GGG + chr1_2:63546241-63546260 None:intergenic 25.0%
!! ATAGTCATATCTTTTCAATC+TGG + chr1_2:63546242-63546261 None:intergenic 25.0%
! ACTTTACTAAAGAGATACTT+AGG - chr1_2:63546339-63546358 Msa0084240:intron 25.0%
! TTAGAAGTAAGATTTAGTAG+AGG - chr1_2:63546615-63546634 Msa0084240:intron 25.0%
! CATTCTTTAATATCAACAGT+AGG + chr1_2:63546652-63546671 None:intergenic 25.0%
!!! TTGAACCTGAATTTTTTATG+AGG + chr1_2:63546815-63546834 None:intergenic 25.0%
!! TTTTCACAAATTTGAGGAAT+TGG + chr1_2:63547294-63547313 None:intergenic 25.0%
!! AATTTTCTTTTCTAATCGGT+TGG - chr1_2:63547453-63547472 Msa0084240:intron 25.0%
!! ATTTTCTTTTCTAATCGGTT+GGG - chr1_2:63547454-63547473 Msa0084240:intron 25.0%
!! TATAAAAAATTAGTTTCGCC+TGG + chr1_2:63547618-63547637 None:intergenic 25.0%
!! TCAGCTTTTACATTATTCTT+TGG - chr1_2:63547688-63547707 Msa0084240:three_prime_UTR 25.0%
!! CAGCTTTTACATTATTCTTT+GGG - chr1_2:63547689-63547708 Msa0084240:three_prime_UTR 25.0%
!! AGCTTTTACATTATTCTTTG+GGG - chr1_2:63547690-63547709 Msa0084240:three_prime_UTR 25.0%
!!! CATTTTGTGTCTTTTATTTC+AGG - chr1_2:63548012-63548031 Msa0084240:intron 25.0%
!! AAAGACATTGGTTAAAGTTT+GGG + chr1_2:63540709-63540728 None:intergenic 25.0%
!! AAAAGACATTGGTTAAAGTT+TGG + chr1_2:63548158-63548177 None:intergenic 25.0%
! TGTTAATAAGATAATCTTGC+TGG - chr1_2:63548366-63548385 Msa0084240:intron 25.0%
!!! CTCTAGGATTACTATAAATA+AGG + chr1_2:63548487-63548506 None:intergenic 25.0%
! CTTATTTATAGTAATCCTAG+AGG - chr1_2:63548485-63548504 Msa0084240:intron 25.0%
! AATGGACACAAATTAGTAAA+TGG - chr1_2:63548527-63548546 Msa0084240:intron 25.0%
! AAATTAGTAAATGGCAAACA+TGG - chr1_2:63548536-63548555 Msa0084240:intron 25.0%
! TATTGTAAATAATAGAGTGG+TGG - chr1_2:63548570-63548589 Msa0084240:intron 25.0%
! ACTTATTGTTAATAGTAGAG+TGG - chr1_2:63548623-63548642 Msa0084240:intron 25.0%
!! TTAAAATTGGAGATTTGGTA+TGG + chr1_2:63548916-63548935 None:intergenic 25.0%
!! CGGTAAAAATCTAAAACAAT+GGG + chr1_2:63549203-63549222 None:intergenic 25.0%
!! TCGGTAAAAATCTAAAACAA+TGG + chr1_2:63549204-63549223 None:intergenic 25.0%
!!! TTCCAAAACTTTTGAAAATC+TGG - chr1_2:63549880-63549899 Msa0084240:intron 25.0%
!! ATCCAGATTTTCAAAAGTTT+TGG + chr1_2:63549885-63549904 None:intergenic 25.0%
! GGCATAAAATTCTTTATCAT+AGG - chr1_2:63550185-63550204 Msa0084240:intron 25.0%
!!! TTTCAGTCAAAAGTTGTTTT+AGG - chr1_2:63550358-63550377 Msa0084240:intron 25.0%
!!! GATTAGCTTCATTTTATAGA+AGG + chr1_2:63550482-63550501 None:intergenic 25.0%
! TATAAAATGAAGCTAATCCA+TGG - chr1_2:63550484-63550503 Msa0084240:intron 25.0%
! TCTAATAAATCATCAAGTCT+AGG - chr1_2:63550972-63550991 Msa0084240:intron 25.0%
! AACACTTAGAGATATTCAAA+TGG + chr1_2:63552893-63552912 None:intergenic 25.0%
! TTTGAATATCTCTAAGTGTT+TGG - chr1_2:63552893-63552912 Msa0084240:intron 25.0%
!! AGAATAATTCTTTTCTGATG+TGG - chr1_2:63552985-63553004 Msa0084240:CDS 25.0%
!! AAAATCACAATTTTCAACAG+GGG - chr1_2:63553087-63553106 Msa0084240:intron 25.0%
! ATTGTAATTTCAGAAAGAAC+AGG - chr1_2:63553114-63553133 Msa0084240:intron 25.0%
! TTGTAATTTCAGAAAGAACA+GGG - chr1_2:63553115-63553134 Msa0084240:intron 25.0%
! TGCAATTTCAAAAAATACAG+GGG - chr1_2:63553145-63553164 Msa0084240:intron 25.0%
!!! CTCTAGGATTACTATAAATA+AGG + chr1_2:63548487-63548506 None:intergenic 25.0%
! CTTATTTATAGTAATCCTAG+AGG - chr1_2:63548485-63548504 Msa0084240:intron 25.0%
! AATGGACACAAATTAGTAAA+TGG - chr1_2:63548527-63548546 Msa0084240:intron 25.0%
! AAATTAGTAAATGGCAAACA+TGG - chr1_2:63548536-63548555 Msa0084240:intron 25.0%
! TATTGTAAATAATAGAGTGG+TGG - chr1_2:63548570-63548589 Msa0084240:intron 25.0%
! ACTTATTGTTAATAGTAGAG+TGG - chr1_2:63548623-63548642 Msa0084240:intron 25.0%
!!! TTTCTAGGATCAACTTTAAT+TGG + chr1_2:63554086-63554105 None:intergenic 25.0%
TTCGATCGATATATTGATCT+TGG - chr1_2:63538906-63538925 Msa0084240:three_prime_UTR 30.0%
CCAGAAACAGAATTGAAATT+GGG + chr1_2:63539140-63539159 None:intergenic 30.0%
ACCAGAAACAGAATTGAAAT+TGG + chr1_2:63539141-63539160 None:intergenic 30.0%
CAAAAAAAGACTAGACATGT+TGG + chr1_2:63539208-63539227 None:intergenic 30.0%
TGGAAAAGAATAAATGTTGG+AGG + chr1_2:63539321-63539340 None:intergenic 30.0%
! CAAATCTCATTTGCATTTTC+TGG - chr1_2:63539567-63539586 Msa0084240:intron 30.0%
TATTGCTTCTGCTAATTTGA+TGG - chr1_2:63539791-63539810 Msa0084240:intron 30.0%
ATGGTATTCATCAATGTTCT+TGG - chr1_2:63539810-63539829 Msa0084240:intron 30.0%
ACAAAACCAAGACATGAAAT+TGG - chr1_2:63539855-63539874 Msa0084240:intron 30.0%
ATGGGGCAAAAATATGTTAT+AGG - chr1_2:63539964-63539983 Msa0084240:intron 30.0%
GTGTCTTACAAAATATGAAG+TGG + chr1_2:63540280-63540299 None:intergenic 30.0%
! TATCAACTGGTTCATCAATT+GGG - chr1_2:63540434-63540453 Msa0084240:intron 30.0%
ATTATGTTGGCATCTACAAT+TGG - chr1_2:63540609-63540628 Msa0084240:intron 30.0%
!!! CACTTTTGCGTTTTTGTTTT+TGG + chr1_2:63540976-63540995 None:intergenic 30.0%
TTGATTAAAAGGGGGAAAAT+GGG + chr1_2:63541217-63541236 None:intergenic 30.0%
TTTGATTAAAAGGGGGAAAA+TGG + chr1_2:63541218-63541237 None:intergenic 30.0%
TGCTTCATTTGATTAAAAGG+GGG + chr1_2:63541225-63541244 None:intergenic 30.0%
GTGCTTCATTTGATTAAAAG+GGG + chr1_2:63541226-63541245 None:intergenic 30.0%
GGTGCTTCATTTGATTAAAA+GGG + chr1_2:63541227-63541246 None:intergenic 30.0%
TGGTGCTTCATTTGATTAAA+AGG + chr1_2:63541228-63541247 None:intergenic 30.0%
TGAATGAGTGAGGAAAAAAA+TGG - chr1_2:63541349-63541368 Msa0084240:intron 30.0%
!! GAGGAAAAAAATGGATTTTG+TGG - chr1_2:63541358-63541377 Msa0084240:intron 30.0%
AGTCTAATCAACCCAAAAAA+GGG + chr1_2:63541681-63541700 None:intergenic 30.0%
AAGTCTAATCAACCCAAAAA+AGG + chr1_2:63541682-63541701 None:intergenic 30.0%
!!! GTTGCTTTGTTTGCATTTTT+TGG - chr1_2:63541814-63541833 Msa0084240:intron 30.0%
AGATGAATGAATTGAGTTTG+TGG - chr1_2:63541881-63541900 Msa0084240:intron 30.0%
GTTTGTGGTTGAATATGAAT+TGG - chr1_2:63541896-63541915 Msa0084240:intron 30.0%
TTGAAGGTGATGAAGAAATT+GGG - chr1_2:63541927-63541946 Msa0084240:intron 30.0%
!! TTTTTGTAACGGGAGTTAAT+GGG - chr1_2:63542131-63542150 Msa0084240:intron 30.0%
!! TTGCGACATGTATTTTGAAA+CGG - chr1_2:63542819-63542838 Msa0084240:intron 30.0%
! GTAAAGTAGCACATTTTGAA+TGG - chr1_2:63543197-63543216 Msa0084240:intron 30.0%
TGCAAATCATCTATGAATGT+TGG - chr1_2:63543268-63543287 Msa0084240:intron 30.0%
GTGTGTGAAAAATTGACAAA+AGG + chr1_2:63543410-63543429 None:intergenic 30.0%
CGAAAAATAATCAAAGCCTA+AGG - chr1_2:63543688-63543707 Msa0084240:intron 30.0%
AACTAAGGTATAGCTTAAAG+AGG - chr1_2:63543735-63543754 Msa0084240:intron 30.0%
AGAGGATTCTTAACATGATA+TGG - chr1_2:63543753-63543772 Msa0084240:intron 30.0%
TTTCTACTAGTCACCTAAAA+AGG + chr1_2:63543791-63543810 None:intergenic 30.0%
ACAGTGGTATTTGTTTATCT+TGG + chr1_2:63543917-63543936 None:intergenic 30.0%
CAGTTATTGAATATTGACAG+TGG + chr1_2:63543933-63543952 None:intergenic 30.0%
! GGAGTAATATTTTTCCATGT+GGG + chr1_2:63544261-63544280 None:intergenic 30.0%
! TGGAGTAATATTTTTCCATG+TGG + chr1_2:63544262-63544281 None:intergenic 30.0%
GTAGAAACCTGTATATAGTT+TGG + chr1_2:63544282-63544301 None:intergenic 30.0%
AAGAAAAACATTAGGTGGTA+GGG - chr1_2:63544527-63544546 Msa0084240:intron 30.0%
TCTTTGTGAGTAGCTAAAAA+TGG - chr1_2:63544676-63544695 Msa0084240:intron 30.0%
ATTATACACACACAATGACT+TGG + chr1_2:63544734-63544753 None:intergenic 30.0%
TTTGTATGTTCCGAAATTGT+AGG - chr1_2:63544831-63544850 Msa0084240:three_prime_UTR 30.0%
GATTGAGTTTCCTACAATTT+CGG + chr1_2:63544844-63544863 None:intergenic 30.0%
AACTCAATCAGAACAAAAAG+AGG - chr1_2:63544855-63544874 Msa0084240:three_prime_UTR 30.0%
ATCTTGTCTTCTATATGTAG+GGG - chr1_2:63545062-63545081 Msa0084240:intron 30.0%
TCTTGATGTTGTTACTATCA+TGG - chr1_2:63545093-63545112 Msa0084240:intron 30.0%
TTCGATCGATATATTGATCT+TGG - chr1_2:63538906-63538925 Msa0084240:three_prime_UTR 30.0%
ATTGTGTATATGGTTATTGG+TGG - chr1_2:63545278-63545297 Msa0084240:three_prime_UTR 30.0%
TTGTGTATATGGTTATTGGT+GGG - chr1_2:63545279-63545298 Msa0084240:three_prime_UTR 30.0%
! CACAAATCAAACAGTCTTAT+TGG - chr1_2:63545345-63545364 Msa0084240:three_prime_UTR 30.0%
CAAGCAACAGAATTGAAATT+GGG + chr1_2:63545413-63545432 None:intergenic 30.0%
ACAAGCAACAGAATTGAAAT+TGG + chr1_2:63545414-63545433 None:intergenic 30.0%
GAAGATACTACTAGACATAT+TGG + chr1_2:63545481-63545500 None:intergenic 30.0%
! AGTGATTGTGGATTAAAATG+TGG + chr1_2:63545954-63545973 None:intergenic 30.0%
! GAACATTTTACAAGTGATTG+TGG + chr1_2:63545966-63545985 None:intergenic 30.0%
TTCAATTGTCAATATGTGCA+GGG + chr1_2:63546076-63546095 None:intergenic 30.0%
TTACTAAAGAGATACTTAGG+TGG - chr1_2:63546342-63546361 Msa0084240:intron 30.0%
CATTCTTTAATCTAAGAGAC+TGG - chr1_2:63546384-63546403 Msa0084240:intron 30.0%
CAGTCCTCAAAATTGTAAAA+GGG + chr1_2:63546476-63546495 None:intergenic 30.0%
TCAGTCCTCAAAATTGTAAA+AGG + chr1_2:63546477-63546496 None:intergenic 30.0%
CTTTGCAAAACTACTAAAAG+AGG + chr1_2:63546514-63546533 None:intergenic 30.0%
TTCGATATGACAATTGATCA+AGG - chr1_2:63546673-63546692 Msa0084240:intron 30.0%
ACAAATAGGTGCAATTGTAT+CGG - chr1_2:63546724-63546743 Msa0084240:intron 30.0%
CAAGACCTCATAAAAAATTC+AGG - chr1_2:63546807-63546826 Msa0084240:intron 30.0%
! CAACTATAGCCTTAATATTG+TGG - chr1_2:63546832-63546851 Msa0084240:intron 30.0%
GTCAAAACACCACAATATTA+AGG + chr1_2:63546844-63546863 None:intergenic 30.0%
CATAGCTAACATTGTCAATT+CGG + chr1_2:63546918-63546937 None:intergenic 30.0%
CAAATATCATTTGCATTTGC+TGG - chr1_2:63546994-63547013 Msa0084240:intron 30.0%
AATTGTAGCTTGGATTTCAA+GGG + chr1_2:63547031-63547050 None:intergenic 30.0%
! GCATATTGCATTGATGAAAT+AGG + chr1_2:63547109-63547128 None:intergenic 30.0%
AATATCCAATGATTGCAACT+GGG + chr1_2:63547137-63547156 None:intergenic 30.0%
! ATCATTGGATATTGGACTTT+TGG - chr1_2:63547144-63547163 Msa0084240:intron 30.0%
! TTGCATTAATAGTTGATACC+TGG + chr1_2:63547269-63547288 None:intergenic 30.0%
AGCCTTACAAAATATGAAGT+GGG + chr1_2:63547772-63547791 None:intergenic 30.0%
AATTTGACATAAGCATAGAG+AGG + chr1_2:63540317-63540336 None:intergenic 30.0%
ATTATCATCCACATTATGCT+AGG + chr1_2:63547893-63547912 None:intergenic 30.0%
TTAGGTGTAGAAACTATAAG+TGG + chr1_2:63548113-63548132 None:intergenic 30.0%
CAAATTGTGAGAATACATGA+AGG - chr1_2:63548455-63548474 Msa0084240:intron 30.0%
CATTACTATTTCAACTACCA+TGG + chr1_2:63548511-63548530 None:intergenic 30.0%
CATGGTAGTTGAAATAGTAA+TGG - chr1_2:63548509-63548528 Msa0084240:intron 30.0%
TATTGTTAATAGTAGAGTGG+TGG - chr1_2:63548626-63548645 Msa0084240:intron 30.0%
ATGAACTTGATATAAACTCG+AGG + chr1_2:63548715-63548734 None:intergenic 30.0%
TATCAATGACAATGCTTACA+AGG + chr1_2:63548807-63548826 None:intergenic 30.0%
! AATTTTGCTGAATTATCCGT+TGG - chr1_2:63548981-63549000 Msa0084240:intron 30.0%
TACTGATGTTTATCTGATGA+TGG - chr1_2:63549061-63549080 Msa0084240:intron 30.0%
AATTCAACTAATCAAGCTAC+TGG + chr1_2:63549145-63549164 None:intergenic 30.0%
! TGTGGATAGATTTTCAAAGA+TGG + chr1_2:63549482-63549501 None:intergenic 30.0%
! GCATATAAAAACCAGTGTTT+TGG - chr1_2:63549599-63549618 Msa0084240:intron 30.0%
TACTGAGAGAGAATTTCTAT+TGG + chr1_2:63549696-63549715 None:intergenic 30.0%
ACTATGCAAATGAAAGTCAT+TGG + chr1_2:63549940-63549959 None:intergenic 30.0%
AATGACTTTCATTTGCATAG+TGG - chr1_2:63549939-63549958 Msa0084240:intron 30.0%
TTCTTACTAAAACATAAGGC+GGG + chr1_2:63550015-63550034 None:intergenic 30.0%
GTTCTTACTAAAACATAAGG+CGG + chr1_2:63550016-63550035 None:intergenic 30.0%
!!! GCCTTATGTTTTAGTAAGAA+CGG - chr1_2:63550015-63550034 Msa0084240:intron 30.0%
TCCGTTCTTACTAAAACATA+AGG + chr1_2:63550019-63550038 None:intergenic 30.0%
TTTAGTGAAAAGCTCAACAA+TGG + chr1_2:63550228-63550247 None:intergenic 30.0%
! TTTTCACTAAAGAAGGCTAT+AGG - chr1_2:63550237-63550256 Msa0084240:intron 30.0%
!!! AAAACTTTTTTGTGCTTGCT+CGG - chr1_2:63550386-63550405 Msa0084240:intron 30.0%
! AAGATCGATCTTTGAAAAGA+TGG - chr1_2:63550932-63550951 Msa0084240:intron 30.0%
GATTTATTAGATCAGTTGCA+TGG + chr1_2:63550963-63550982 None:intergenic 30.0%
AAATCATCAAGTCTAGGTAT+CGG - chr1_2:63550978-63550997 Msa0084240:intron 30.0%
! ATTCTATAAGCTGGTCTATT+AGG - chr1_2:63551182-63551201 Msa0084240:intron 30.0%
AGCATTTGTTCAATTTCTAC+TGG - chr1_2:63551305-63551324 Msa0084240:intron 30.0%
TTTGTTCAATTTCTACTGGA+AGG - chr1_2:63551309-63551328 Msa0084240:intron 30.0%
GATTAAAGACACTAATGACT+TGG - chr1_2:63551415-63551434 Msa0084240:intron 30.0%
!!! TTGTTTTTATCAAGTCCACT+CGG - chr1_2:63551446-63551465 Msa0084240:intron 30.0%
! TTTTACTCCATCTTTGACAA+AGG - chr1_2:63551490-63551509 Msa0084240:intron 30.0%
!! AGAAGTATCAAGATCAAGTT+TGG + chr1_2:63551613-63551632 None:intergenic 30.0%
TGTGATGTTATAATAGACAG+TGG + chr1_2:63551785-63551804 None:intergenic 30.0%
ATGAGCTCTTCATCATAAAT+TGG - chr1_2:63551926-63551945 Msa0084240:intron 30.0%
! TCTAACTCTTCTTCTTTTTC+AGG - chr1_2:63551950-63551969 Msa0084240:intron 30.0%
! TGTTTCAAATGTCAAGGTTT+TGG + chr1_2:63552070-63552089 None:intergenic 30.0%
TAAATGTTTCTCCACTCTTA+TGG - chr1_2:63552228-63552247 Msa0084240:intron 30.0%
AAAAAGCAAGATCAACACTT+GGG + chr1_2:63552515-63552534 None:intergenic 30.0%
! TTTTAGATTTTCCCACCAAA+TGG - chr1_2:63552555-63552574 Msa0084240:intron 30.0%
! GTAGATATTCCTGATTTTGA+AGG + chr1_2:63552703-63552722 None:intergenic 30.0%
TTACAGTTTCTTGTAACTGT+TGG - chr1_2:63552848-63552867 Msa0084240:intron 30.0%
AAATTTCCTATTATGCTCTG+TGG + chr1_2:63553031-63553050 None:intergenic 30.0%
TGTAATTTCAGAAAGAACAG+GGG - chr1_2:63553116-63553135 Msa0084240:intron 30.0%
! TTGCAATTTCGGAAATGTTT+TGG - chr1_2:63553258-63553277 Msa0084240:CDS 30.0%
! TGCAATTTCGGAAATGTTTT+GGG - chr1_2:63553259-63553278 Msa0084240:CDS 30.0%
!!! GCGTTAGTTTTGTGAAAAAA+TGG - chr1_2:63553610-63553629 Msa0084240:intron 30.0%
CAAATTGTGAGAATACATGA+AGG - chr1_2:63548455-63548474 Msa0084240:intron 30.0%
CATTACTATTTCAACTACCA+TGG + chr1_2:63548511-63548530 None:intergenic 30.0%
CATGGTAGTTGAAATAGTAA+TGG - chr1_2:63548509-63548528 Msa0084240:intron 30.0%
TATTGTTAATAGTAGAGTGG+TGG - chr1_2:63548626-63548645 Msa0084240:intron 30.0%
TCAACTTTAATTGGACATTC+AGG + chr1_2:63554077-63554096 None:intergenic 30.0%
!!! TATCTTCTTTTGAAACTGCA+AGG - chr1_2:63554133-63554152 Msa0084240:CDS 30.0%
AGCAACTGATTGTACAAGTA+GGG - chr1_2:63538976-63538995 Msa0084240:three_prime_UTR 35.0%
GACACTGTCTATATGGTTAT+TGG - chr1_2:63539002-63539021 Msa0084240:intron 35.0%
ACTGTCTATATGGTTATTGG+TGG - chr1_2:63539005-63539024 Msa0084240:intron 35.0%
CTGTCTATATGGTTATTGGT+GGG - chr1_2:63539006-63539025 Msa0084240:intron 35.0%
CACAAATCAAGCAGACTTAT+TGG - chr1_2:63539072-63539091 Msa0084240:intron 35.0%
GAAGCTGAGACAGAAAAAAA+TGG + chr1_2:63539118-63539137 None:intergenic 35.0%
CCCAATTTCAATTCTGTTTC+TGG - chr1_2:63539137-63539156 Msa0084240:intron 35.0%
GTATATGATAGGCCTGATTA+AGG - chr1_2:63539290-63539309 Msa0084240:intron 35.0%
CAGCTATTCAACTATAGCAT+GGG - chr1_2:63539446-63539465 Msa0084240:intron 35.0%
AATATCCTAAGGTTGCAACA+GGG + chr1_2:63539710-63539729 None:intergenic 35.0%
TGTTGCAACCTTAGGATATT+GGG - chr1_2:63539710-63539729 Msa0084240:intron 35.0%
! TTTTCGCCAATTTCATGTCT+TGG + chr1_2:63539864-63539883 None:intergenic 35.0%
ATAAGCATAGAGGAATTGAG+AGG + chr1_2:63540309-63540328 None:intergenic 35.0%
TTCAGCTTCCTAGTATAATG+TGG - chr1_2:63540382-63540401 Msa0084240:intron 35.0%
! GTATCAACTGGTTCATCAAT+TGG - chr1_2:63540433-63540452 Msa0084240:intron 35.0%
CATAGGTGTGTGTATTATGT+TGG - chr1_2:63540596-63540615 Msa0084240:intron 35.0%
TTGTAACGTCAATGCACTTT+AGG + chr1_2:63540682-63540701 None:intergenic 35.0%
CAAAAACACGCGAAATTACA+GGG + chr1_2:63542227-63542246 None:intergenic 35.0%
CAAACGGTTAGCAAATTACA+AGG + chr1_2:63540822-63540841 None:intergenic 35.0%
!! TTTTTGTAACGGGAGTTAAC+GGG + chr1_2:63540857-63540876 None:intergenic 35.0%
!! GTTTTTGTAACGGGAGTTAA+CGG + chr1_2:63542130-63542149 None:intergenic 35.0%
! CACTACAACGTTTTTGTAAC+GGG + chr1_2:63540867-63540886 None:intergenic 35.0%
! CCACTACAACGTTTTTGTAA+CGG + chr1_2:63540868-63540887 None:intergenic 35.0%
! ACAAAAACGCAAAAGTGCAT+AGG - chr1_2:63540979-63540998 Msa0084240:intron 35.0%
! CAAAAACGCAAAAGTGCATA+GGG - chr1_2:63540980-63540999 Msa0084240:intron 35.0%
AGAAGAAAAAATAGAGGGAG+AGG + chr1_2:63541041-63541060 None:intergenic 35.0%
TTTAACATGTGAGTGATGCT+TGG + chr1_2:63541147-63541166 None:intergenic 35.0%
ATCGTCAACCCATAAATCAA+AGG - chr1_2:63541508-63541527 Msa0084240:intron 35.0%
AAGATCTGAAGAAAAAGCCA+TGG - chr1_2:63541559-63541578 Msa0084240:intron 35.0%
CATGGATGAATATGTGTTCT+GGG - chr1_2:63541577-63541596 Msa0084240:intron 35.0%
!!! TATGCTTTGCAACCCTTTTT+TGG - chr1_2:63541666-63541685 Msa0084240:intron 35.0%
!!! ATGCTTTGCAACCCTTTTTT+GGG - chr1_2:63541667-63541686 Msa0084240:intron 35.0%
TCATCTTCAGAAACACTACA+TGG + chr1_2:63541867-63541886 None:intergenic 35.0%
TGAATTGGATTTGTGGTTGA+AGG - chr1_2:63541911-63541930 Msa0084240:intron 35.0%
GTTGAAGGTGATGAAGAAAT+TGG - chr1_2:63541926-63541945 Msa0084240:intron 35.0%
TGAAGGTGATGAAGAAATTG+GGG - chr1_2:63541928-63541947 Msa0084240:intron 35.0%
TAAGAAAAAAACAGTGGGAG+AGG - chr1_2:63541962-63541981 Msa0084240:intron 35.0%
! CAAAAACGCAAAAGTGCATA+GGG + chr1_2:63540980-63540999 None:intergenic 35.0%
!! GTTTTTGTAACGGGAGTTAA+TGG - chr1_2:63542130-63542149 Msa0084240:intron 35.0%
CAAAAACACGCGAAATTACA+GGG - chr1_2:63542227-63542246 Msa0084240:intron 35.0%
AGGGGACGAAAAATGAAATT+TGG + chr1_2:63542350-63542369 None:intergenic 35.0%
GTATATTGACATGTGTGTAG+TGG + chr1_2:63542646-63542665 None:intergenic 35.0%
!!! CTTACCAAATTTTTTGGTGG+TGG + chr1_2:63543121-63543140 None:intergenic 35.0%
ATCCTACAAATGTCAAGAAG+TGG - chr1_2:63543237-63543256 Msa0084240:intron 35.0%
TTCCACTTCTTGACATTTGT+AGG + chr1_2:63543242-63543261 None:intergenic 35.0%
TTGTTATGACAACTATGCGA+TGG - chr1_2:63543440-63543459 Msa0084240:intron 35.0%
!!! GTGCTGTTTAGTACCTTTTT+AGG - chr1_2:63543775-63543794 Msa0084240:intron 35.0%
!! GAGTGATGGGAACATTTTAT+TGG + chr1_2:63543990-63544009 None:intergenic 35.0%
TTTCTACGTTGTAACTAGAC+AGG - chr1_2:63544295-63544314 Msa0084240:intron 35.0%
TTCTACGTTGTAACTAGACA+GGG - chr1_2:63544296-63544315 Msa0084240:intron 35.0%
! AGCAATAACAAAAGCACAAG+TGG - chr1_2:63544503-63544522 Msa0084240:intron 35.0%
CAAGTGGCAAGAAAAACATT+AGG - chr1_2:63544519-63544538 Msa0084240:intron 35.0%
CAAGAAAAACATTAGGTGGT+AGG - chr1_2:63544526-63544545 Msa0084240:intron 35.0%
ACTTTGATTCCAACATCCTA+GGG - chr1_2:63544634-63544653 Msa0084240:intron 35.0%
ATTACCTTAGAAGGTAGAGA+AGG + chr1_2:63544710-63544729 None:intergenic 35.0%
! TGACTTGGAATTACCTTAGA+AGG + chr1_2:63544719-63544738 None:intergenic 35.0%
TCAATCAGAACAAAAAGAGG+TGG - chr1_2:63544858-63544877 Msa0084240:three_prime_UTR 35.0%
AGTAACAACATCAAGATTCC+TGG + chr1_2:63545089-63545108 None:intergenic 35.0%
AGCAACTGATTGTACAAGTT+GGG - chr1_2:63545249-63545268 Msa0084240:intron 35.0%
TGGGTGTGATATTGTGTATA+TGG - chr1_2:63545268-63545287 Msa0084240:intron 35.0%
!! CTGTTTGATTTGTGTACAGT+CGG + chr1_2:63545339-63545358 None:intergenic 35.0%
GAAGCTGAGACAGAAAAAAA+TGG + chr1_2:63539118-63539137 None:intergenic 35.0%
GTTCAATTGTCAATATGTGC+AGG + chr1_2:63546077-63546096 None:intergenic 35.0%
AGCAAGACTCAATTTCAACA+TGG - chr1_2:63546124-63546143 Msa0084240:three_prime_UTR 35.0%
!! TATCTTTTCAATCTGGGACT+TGG + chr1_2:63546235-63546254 None:intergenic 35.0%
ACACTCATCACCTTATGAAT+CGG - chr1_2:63546279-63546298 Msa0084240:intron 35.0%
!! CCTTATGAATCGGTTTTGTA+CGG - chr1_2:63546289-63546308 Msa0084240:intron 35.0%
!! CGGTTTTGTACGGATTAATT+AGG - chr1_2:63546299-63546318 Msa0084240:intron 35.0%
TAAAGAGATACTTAGGTGGA+GGG - chr1_2:63546346-63546365 Msa0084240:intron 35.0%
CCTCAAAATTGTAAAAGGGT+CGG + chr1_2:63546472-63546491 None:intergenic 35.0%
GAATTGTAGCTTGGATTTCA+AGG + chr1_2:63547032-63547051 None:intergenic 35.0%
!! GCTATCTTTGATGGTTTTTC+AGG + chr1_2:63547063-63547082 None:intergenic 35.0%
AACCATCAAAGATAGCAATG+TGG - chr1_2:63547067-63547086 Msa0084240:intron 35.0%
TTCCACATTGCTATCTTTGA+TGG + chr1_2:63547072-63547091 None:intergenic 35.0%
TCAAAGATAGCAATGTGGAA+TGG - chr1_2:63547072-63547091 Msa0084240:intron 35.0%
TATTTCCCAGTTGCAATCAT+TGG - chr1_2:63547129-63547148 Msa0084240:intron 35.0%
CAATATCCAATGATTGCAAC+TGG + chr1_2:63547138-63547157 None:intergenic 35.0%
CAGTTGCAATCATTGGATAT+TGG - chr1_2:63547136-63547155 Msa0084240:intron 35.0%
! TGTCACTTGAAAAACCTTCA+TGG - chr1_2:63547193-63547212 Msa0084240:intron 35.0%
ATGGTATTCATCCATGTTGT+TGG - chr1_2:63547237-63547256 Msa0084240:intron 35.0%
CTCTCAATCAAGTCAAAAAC+AGG + chr1_2:63547508-63547527 None:intergenic 35.0%
!!! CTGTTTTTGACTTGATTGAG+AGG - chr1_2:63547506-63547525 Msa0084240:intron 35.0%
! CTCCCACTTCATATTTTGTA+AGG - chr1_2:63540274-63540293 Msa0084240:intron 35.0%
GAGCCTTACAAAATATGAAG+TGG + chr1_2:63547773-63547792 None:intergenic 35.0%
! CAGTTGATGCTGAATTTCTT+TGG + chr1_2:63547923-63547942 None:intergenic 35.0%
CAAAGAAATTCAGCATCAAC+TGG - chr1_2:63547921-63547940 Msa0084240:CDS 35.0%
! CATCAACTGGTTCATCAATT+GGG - chr1_2:63547934-63547953 Msa0084240:CDS 35.0%
!! TTGTGTCTTTTATTTCAGGC+TGG - chr1_2:63548016-63548035 Msa0084240:intron 35.0%
TTTCAGGCTGGAATTTACAT+AGG - chr1_2:63548028-63548047 Msa0084240:intron 35.0%
CATAGGTGTATGTATTATGC+TGG - chr1_2:63548045-63548064 Msa0084240:intron 35.0%
ATTGCAACATCATGCACTTT+AGG + chr1_2:63548131-63548150 None:intergenic 35.0%
CATAAAGTAGCACATGTTGA+AGG - chr1_2:63548239-63548258 Msa0084240:intron 35.0%
GTGAGAATACATGAAGGAAA+TGG - chr1_2:63548461-63548480 Msa0084240:intron 35.0%
! TAATAGAGTGGTGGAATATG+AGG - chr1_2:63548579-63548598 Msa0084240:intron 35.0%
TTAATCTGTATCATTCTCCC+CGG - chr1_2:63548673-63548692 Msa0084240:intron 35.0%
TCAAGTTCATCATCCAGATA+TGG - chr1_2:63548725-63548744 Msa0084240:intron 35.0%
! AACTTGGCATTTGGTTGTTT+TGG - chr1_2:63548866-63548885 Msa0084240:intron 35.0%
! TACTGGAAAATGTCCTTTTG+AGG + chr1_2:63549128-63549147 None:intergenic 35.0%
AAAACAATGGGATCTCATCT+TGG + chr1_2:63549191-63549210 None:intergenic 35.0%
! GAAGCTGTTAACAGGATTTT+GGG + chr1_2:63549247-63549266 None:intergenic 35.0%
! TGAAGCTGTTAACAGGATTT+TGG + chr1_2:63549248-63549267 None:intergenic 35.0%
!! ATTTTTGGAGAACCTTATGG+AGG + chr1_2:63549330-63549349 None:intergenic 35.0%
!!! GTCATTTTTGGAGAACCTTA+TGG + chr1_2:63549333-63549352 None:intergenic 35.0%
AACATCTCTATCAGAAGTGA+TGG - chr1_2:63549363-63549382 Msa0084240:intron 35.0%
! CTATCAGAAGTGATGGTTTT+TGG - chr1_2:63549370-63549389 Msa0084240:intron 35.0%
AAGGAAATTGTTCGTCTTCA+TGG + chr1_2:63549400-63549419 None:intergenic 35.0%
!! AGTTGCTGACTTATACTTCA+AGG + chr1_2:63549419-63549438 None:intergenic 35.0%
!!! GAACGACATCATTAGTCTTT+TGG - chr1_2:63549440-63549459 Msa0084240:intron 35.0%
!!! ACATCATTAGTCTTTTGGCA+TGG - chr1_2:63549445-63549464 Msa0084240:intron 35.0%
!!! CATCATTAGTCTTTTGGCAT+GGG - chr1_2:63549446-63549465 Msa0084240:intron 35.0%
! TATACGTCTCTTTCAAGTCT+TGG - chr1_2:63549670-63549689 Msa0084240:intron 35.0%
TCTACGAGAAGCCATTATTT+GGG + chr1_2:63549773-63549792 None:intergenic 35.0%
! CATGAGGGATTTTTGTTCAA+AGG + chr1_2:63549823-63549842 None:intergenic 35.0%
TTGTAAAAACTCACTCCAAG+CGG - chr1_2:63550044-63550063 Msa0084240:intron 35.0%
! TCTGCGATTGATCTTTTGTT+GGG - chr1_2:63550071-63550090 Msa0084240:intron 35.0%
! GTTGAGCTTTTCACTAAAGA+AGG - chr1_2:63550230-63550249 Msa0084240:intron 35.0%
TAAAGGGAGATCAATTCCAA+TGG + chr1_2:63550413-63550432 None:intergenic 35.0%
CATGATGTTAGAAGTTTCCA+TGG + chr1_2:63550504-63550523 None:intergenic 35.0%
CTAACATCATGAATTGACTG+TGG - chr1_2:63550513-63550532 Msa0084240:intron 35.0%
TCATGAATTGACTGTGGAAT+AGG - chr1_2:63550519-63550538 Msa0084240:intron 35.0%
GGTTACATAATCACAGCTAA+AGG + chr1_2:63550588-63550607 None:intergenic 35.0%
ATTCATTGGCAAGTTTGTAG+TGG + chr1_2:63550757-63550776 None:intergenic 35.0%
ACTACAAACTTGCCAATGAA+TGG - chr1_2:63550756-63550775 Msa0084240:intron 35.0%
CCAGAGATGGTTTATATGAA+TGG + chr1_2:63550851-63550870 None:intergenic 35.0%
CCATTCATATAAACCATCTC+TGG - chr1_2:63550848-63550867 Msa0084240:intron 35.0%
! ATCGATCTTTGAAAAGATGG+TGG - chr1_2:63550935-63550954 Msa0084240:intron 35.0%
TATCGGAAATCGATACTTGA+TGG - chr1_2:63550995-63551014 Msa0084240:intron 35.0%
!! ATTTTAGTCCCCAAAAAGGA+TGG + chr1_2:63551065-63551084 None:intergenic 35.0%
!! TGCAATTTTAGTCCCCAAAA+AGG + chr1_2:63551069-63551088 None:intergenic 35.0%
!! TTTTTGGGGACTAAAATTGC+AGG - chr1_2:63551068-63551087 Msa0084240:intron 35.0%
GTAATTTCAGCATGTTCTTG+TGG - chr1_2:63551155-63551174 Msa0084240:intron 35.0%
!! CATGCTATTGACTTTATTCC+TGG + chr1_2:63551218-63551237 None:intergenic 35.0%
! CTGCATTTTCTTCGAACAAT+AGG - chr1_2:63551339-63551358 Msa0084240:intron 35.0%
GAACAATAGGATAAAGCTCA+TGG - chr1_2:63551352-63551371 Msa0084240:intron 35.0%
ATAGGATAAAGCTCATGGTT+TGG - chr1_2:63551357-63551376 Msa0084240:intron 35.0%
ATCTTGATACTTCTGACCAA+TGG - chr1_2:63551619-63551638 Msa0084240:intron 35.0%
GACCAATGGAAAAATTCACA+AGG - chr1_2:63551633-63551652 Msa0084240:intron 35.0%
! TGCCTTGTGAATTTTTCCAT+TGG + chr1_2:63551638-63551657 None:intergenic 35.0%
AAACTACAATGGCTCAACAA+AGG + chr1_2:63551686-63551705 None:intergenic 35.0%
! TTGAGCCATTGTAGTTTGTA+AGG - chr1_2:63551689-63551708 Msa0084240:intron 35.0%
CTCATCCTTACAAACTACAA+TGG + chr1_2:63551697-63551716 None:intergenic 35.0%
! CATTGTAGTTTGTAAGGATG+AGG - chr1_2:63551695-63551714 Msa0084240:intron 35.0%
! AAATGTGGTATCGAACTACA+TGG + chr1_2:63551753-63551772 None:intergenic 35.0%
!!! CTTCTTTTTCAGGTTCATCT+TGG - chr1_2:63551960-63551979 Msa0084240:intron 35.0%
!! AGCTTATGAAGAAGTTGATG+AGG + chr1_2:63551993-63552012 None:intergenic 35.0%
! AACCTTGACATTTGAAACAC+TGG - chr1_2:63552071-63552090 Msa0084240:intron 35.0%
! ACCTTGACATTTGAAACACT+GGG - chr1_2:63552072-63552091 Msa0084240:intron 35.0%
!! AGCTTTGGGTTTATTTACTG+TGG - chr1_2:63552096-63552115 Msa0084240:intron 35.0%
! TTTGGGTTTATTTACTGTGG+TGG - chr1_2:63552099-63552118 Msa0084240:intron 35.0%
TTGGGTTTATTTACTGTGGT+GGG - chr1_2:63552100-63552119 Msa0084240:intron 35.0%
!! AGAAGGTTTTGTAGAAGTAC+TGG - chr1_2:63552129-63552148 Msa0084240:intron 35.0%
!!! GAAGGTTTTGTAGAAGTACT+GGG - chr1_2:63552130-63552149 Msa0084240:intron 35.0%
!!! GCTGATCGTTATTTGTTTTG+CGG - chr1_2:63552152-63552171 Msa0084240:intron 35.0%
!!! CTGATCGTTATTTGTTTTGC+GGG - chr1_2:63552153-63552172 Msa0084240:intron 35.0%
!!! TGATCGTTATTTGTTTTGCG+GGG - chr1_2:63552154-63552173 Msa0084240:intron 35.0%
ATAAGAAGAATTCTCAGTGG+AGG - chr1_2:63552177-63552196 Msa0084240:intron 35.0%
ATTCCTATAAGAACGCTTCT+TGG - chr1_2:63552204-63552223 Msa0084240:intron 35.0%
TTCCTATAAGAACGCTTCTT+GGG - chr1_2:63552205-63552224 Msa0084240:intron 35.0%
TATTCGTTTAGCCATAAGAG+TGG + chr1_2:63552242-63552261 None:intergenic 35.0%
GAAAAAGCAAGATCAACACT+TGG + chr1_2:63552516-63552535 None:intergenic 35.0%
!!! TGATCTTGCTTTTTCCTTCA+CGG - chr1_2:63552521-63552540 Msa0084240:intron 35.0%
TGTAGCTTTCCTTCAAAATC+AGG - chr1_2:63552691-63552710 Msa0084240:intron 35.0%
TCTCTGAATGATTGTCTTTG+TGG - chr1_2:63552736-63552755 Msa0084240:intron 35.0%
AAATGCACAACAAGCACAAT+TGG + chr1_2:63552830-63552849 None:intergenic 35.0%
!! TCTGCAATTTTTGAAAGCTG+AGG - chr1_2:63553172-63553191 Msa0084240:intron 35.0%
!! CTGCAATTTTTGAAAGCTGA+GGG - chr1_2:63553173-63553192 Msa0084240:intron 35.0%
!! TGCAATTTTTGAAAGCTGAG+GGG - chr1_2:63553174-63553193 Msa0084240:intron 35.0%
TTGGGGCAAAATTGCAATTT+CGG - chr1_2:63553247-63553266 Msa0084240:CDS 35.0%
! GCAATTTCGGAAATGTTTTG+GGG - chr1_2:63553260-63553279 Msa0084240:CDS 35.0%
GGGGCAAATTTGTAATTTCT+AGG - chr1_2:63553279-63553298 Msa0084240:CDS 35.0%
!! CGGAAAGTTTGAGTTTTCTA+AGG + chr1_2:63553684-63553703 None:intergenic 35.0%
AGTTTGAGTGCAAGAATCAA+CGG + chr1_2:63553704-63553723 None:intergenic 35.0%
GTGAGAATACATGAAGGAAA+TGG - chr1_2:63548461-63548480 Msa0084240:intron 35.0%
! TAATAGAGTGGTGGAATATG+AGG - chr1_2:63548579-63548598 Msa0084240:intron 35.0%
! TGCATATGCGTTTTCTTTCT+AGG + chr1_2:63554101-63554120 None:intergenic 35.0%
! GAAAATTGCCTTTTTCCCTT+TGG + chr1_2:63554162-63554181 None:intergenic 35.0%
! GATCTTGGTAGACATGCTTT+TGG - chr1_2:63538921-63538940 Msa0084240:three_prime_UTR 40.0%
! CATGCTTTTGGACCAAAACT+TGG - chr1_2:63538933-63538952 Msa0084240:three_prime_UTR 40.0%
! ACAATCCATGCTCCAAGTTT+TGG + chr1_2:63538948-63538967 None:intergenic 40.0%
ACTTGTACAATCAGTTGCTG+AGG + chr1_2:63538975-63538994 None:intergenic 40.0%
CAGCAACTGATTGTACAAGT+AGG - chr1_2:63538975-63538994 Msa0084240:three_prime_UTR 40.0%
CAGCATCTGTGATGTCATTA+AGG - chr1_2:63539171-63539190 Msa0084240:intron 40.0%
GCAGCTATTCAACTATAGCA+TGG - chr1_2:63539445-63539464 Msa0084240:intron 40.0%
CTATTCAACTATAGCATGGG+TGG - chr1_2:63539449-63539468 Msa0084240:intron 40.0%
! GAATTTCAAGTGTCACTGCT+TGG + chr1_2:63539593-63539612 None:intergenic 40.0%
AGCAGTGACACTTGAAATTC+AGG - chr1_2:63539593-63539612 Msa0084240:intron 40.0%
TTCCACATTGGTATCTTCGA+GGG + chr1_2:63539645-63539664 None:intergenic 40.0%
TTTCCACATTGGTATCTTCG+AGG + chr1_2:63539646-63539665 None:intergenic 40.0%
TCGAAGATACCAATGTGGAA+AGG - chr1_2:63539645-63539664 Msa0084240:intron 40.0%
CAAATAGCACCTTTCCACAT+TGG + chr1_2:63539657-63539676 None:intergenic 40.0%
TATTTCCCTGTTGCAACCTT+AGG - chr1_2:63539702-63539721 Msa0084240:intron 40.0%
CAATATCCTAAGGTTGCAAC+AGG + chr1_2:63539711-63539730 None:intergenic 40.0%
CTGTTGCAACCTTAGGATAT+TGG - chr1_2:63539709-63539728 Msa0084240:intron 40.0%
! ACCTTAGGATATTGGGCTTT+TGG - chr1_2:63539717-63539736 Msa0084240:intron 40.0%
TCCAAAAGCCCAATATCCTA+AGG + chr1_2:63539721-63539740 None:intergenic 40.0%
! TGTCACTTGAAAGACCTTCA+TGG - chr1_2:63539766-63539785 Msa0084240:intron 40.0%
! GTTTTGTATAGAGACCTACC+TGG + chr1_2:63539842-63539861 None:intergenic 40.0%
AATCAAGTCGAAAACAGGCA+TGG + chr1_2:63539996-63540015 None:intergenic 40.0%
!! CCTGTTTTCGACTTGATTGA+GGG - chr1_2:63539998-63540017 Msa0084240:intron 40.0%
!! CTGTTTTCGACTTGATTGAG+GGG - chr1_2:63539999-63540018 Msa0084240:intron 40.0%
ATCCGCTTATGTAGGTAAGA+TGG - chr1_2:63540078-63540097 Msa0084240:intron 40.0%
TGCCATCTTACCTACATAAG+CGG + chr1_2:63540083-63540102 None:intergenic 40.0%
CCAAGAAGATCTCCAAAGAA+AGG + chr1_2:63540231-63540250 None:intergenic 40.0%
! CCTTTCTTTGGAGATCTTCT+TGG - chr1_2:63540228-63540247 Msa0084240:intron 40.0%
GGAGATCTTCTTGGATTCTT+TGG - chr1_2:63540237-63540256 Msa0084240:intron 40.0%
GATCTTCTTGGATTCTTTGG+TGG - chr1_2:63540240-63540259 Msa0084240:intron 40.0%
!! CTTGGATTCTTTGGTGGATT+TGG - chr1_2:63540246-63540265 Msa0084240:intron 40.0%
!! GGTTGATAATCAAGAAGCCA+AGG - chr1_2:63540403-63540422 Msa0084240:intron 40.0%
! CAGTTGATACTGAATCTCCT+TGG + chr1_2:63540423-63540442 None:intergenic 40.0%
CAAGGAGATTCAGTATCAAC+TGG - chr1_2:63540421-63540440 Msa0084240:intron 40.0%
TTTCAGGCTGCAATTTGCAT+AGG - chr1_2:63540579-63540598 Msa0084240:intron 40.0%
ATGTTGGCATCTACAATTGG+TGG - chr1_2:63540612-63540631 Msa0084240:intron 40.0%
GCAAAAACACGCGAAATTAC+AGG + chr1_2:63542226-63542245 None:intergenic 40.0%
CCGTTACAAAAACGTTGTAG+TGG - chr1_2:63540865-63540884 Msa0084240:intron 40.0%
AAAAACGTTGTAGTGGCAGA+CGG - chr1_2:63540872-63540891 Msa0084240:intron 40.0%
ATGATGAGTGGCTAGAAGTA+GGG - chr1_2:63540949-63540968 Msa0084240:intron 40.0%
GGGGTTGAAGATGAAGAAAT+TGG + chr1_2:63541075-63541094 None:intergenic 40.0%
GAGTAGAAGAGAAGAAGACA+TGG - chr1_2:63541417-63541436 Msa0084240:intron 40.0%
AAGAGAAGAAGACATGGAGA+AGG - chr1_2:63541423-63541442 Msa0084240:intron 40.0%
GTCAACCCATAAATCAAAGG+CGG - chr1_2:63541511-63541530 Msa0084240:intron 40.0%
CCAGAACACATATTCATCCA+TGG + chr1_2:63541579-63541598 None:intergenic 40.0%
CCATGGATGAATATGTGTTC+TGG - chr1_2:63541576-63541595 Msa0084240:intron 40.0%
! AGTTTGATGCTTTTGATGCC+CGG - chr1_2:63541624-63541643 Msa0084240:intron 40.0%
! CCAAAAACGCAAAAGTGCAT+AGG + chr1_2:63542015-63542034 None:intergenic 40.0%
! CCTATGCACTTTTGCGTTTT+TGG - chr1_2:63542012-63542031 Msa0084240:intron 40.0%
! CCACCACAACGTTTTTGTAA+CGG - chr1_2:63542120-63542139 Msa0084240:intron 40.0%
! CACCACAACGTTTTTGTAAC+GGG - chr1_2:63542121-63542140 Msa0084240:intron 40.0%
CAAACGGTTAGCAACTTACA+AGG - chr1_2:63542166-63542185 Msa0084240:intron 40.0%
GCAAAAACACGCGAAATTAC+AGG - chr1_2:63542226-63542245 Msa0084240:intron 40.0%
!!! CGACATGTATTTTGAAACGG+AGG - chr1_2:63542822-63542841 Msa0084240:intron 40.0%
! TGAGCATAACTCAGTTGGTA+TGG - chr1_2:63543054-63543073 Msa0084240:intron 40.0%
! GTAGCACATTTTGAATGGCA+TGG - chr1_2:63543202-63543221 Msa0084240:intron 40.0%
! CATTTTGAATGGCATGGTGT+AGG - chr1_2:63543208-63543227 Msa0084240:intron 40.0%
! TTTAACTTAGTGGAAGGGAG+CGG + chr1_2:63543837-63543856 None:intergenic 40.0%
! CGCTGTTTAACTTAGTGGAA+GGG + chr1_2:63543842-63543861 None:intergenic 40.0%
! TCGCTGTTTAACTTAGTGGA+AGG + chr1_2:63543843-63543862 None:intergenic 40.0%
GTGGCAAGAAAAACATTAGG+TGG - chr1_2:63544522-63544541 Msa0084240:intron 40.0%
CACTTTGATTCCAACATCCT+AGG - chr1_2:63544633-63544652 Msa0084240:intron 40.0%
TCAAAGAAAGAGAAGACCCT+AGG + chr1_2:63544653-63544672 None:intergenic 40.0%
GAACAAAAAGAGGTGGAGAA+TGG - chr1_2:63544865-63544884 Msa0084240:three_prime_UTR 40.0%
TTACCATCCTAGATATGCCA+TGG + chr1_2:63544977-63544996 None:intergenic 40.0%
! GATCTTGGTAGACATGCTTT+TGG - chr1_2:63538921-63538940 Msa0084240:three_prime_UTR 40.0%
! CATGCTTTTGGACCAAAACT+TGG - chr1_2:63538933-63538952 Msa0084240:three_prime_UTR 40.0%
! ACAATCCATGCACCAAGTTT+TGG + chr1_2:63545221-63545240 None:intergenic 40.0%
ACTTGTACAATCAGTTGCTG+AGG + chr1_2:63538975-63538994 None:intergenic 40.0%
CAGCAACTGATTGTACAAGT+TGG - chr1_2:63538975-63538994 Msa0084240:three_prime_UTR 40.0%
! GAAGTGTCTAAAGCAGTTTG+TGG - chr1_2:63545301-63545320 Msa0084240:three_prime_UTR 40.0%
TGAGTTTCCTTGAGATTGCA+AGG - chr1_2:63545726-63545745 Msa0084240:intron 40.0%
GAGTTTCCTTGAGATTGCAA+GGG - chr1_2:63545727-63545746 Msa0084240:intron 40.0%
CTAAAACCCTTGCAATCTCA+AGG + chr1_2:63545736-63545755 None:intergenic 40.0%
ATATTTATGTTGGGCCACGA+GGG - chr1_2:63545873-63545892 Msa0084240:three_prime_UTR 40.0%
ACTCAGTTGTATGGTTGTTG+TGG + chr1_2:63545925-63545944 None:intergenic 40.0%
!! TTGATGGACTCACACTTGAA+GGG + chr1_2:63546049-63546068 None:intergenic 40.0%
!! ATTGATGGACTCACACTTGA+AGG + chr1_2:63546050-63546069 None:intergenic 40.0%
ATATGTGCAGGGAAGATTGA+TGG + chr1_2:63546065-63546084 None:intergenic 40.0%
! CCGTACAAAACCGATTCATA+AGG + chr1_2:63546292-63546311 None:intergenic 40.0%
CTAAAGAGATACTTAGGTGG+AGG - chr1_2:63546345-63546364 Msa0084240:intron 40.0%
! CCGACCCTTTTACAATTTTG+AGG - chr1_2:63546469-63546488 Msa0084240:intron 40.0%
GTGAAACAATTCAGAAGCAG+CGG - chr1_2:63546548-63546567 Msa0084240:intron 40.0%
! TTAACGGCAGAGTTCTGATT+GGG + chr1_2:63546765-63546784 None:intergenic 40.0%
! TTTAACGGCAGAGTTCTGAT+TGG + chr1_2:63546766-63546785 None:intergenic 40.0%
! TCTAGCTTACACGCGTTTAA+CGG + chr1_2:63546781-63546800 None:intergenic 40.0%
TTCAGAGTCTTCAATGCACT+TGG - chr1_2:63546970-63546989 Msa0084240:intron 40.0%
! GTGTTGATGGAATTGTAGCT+TGG + chr1_2:63547041-63547060 None:intergenic 40.0%
!!! GATGGTTTTTCAGGTGTTGA+TGG + chr1_2:63547054-63547073 None:intergenic 40.0%
TATTGCCTCTGCTAACTTGA+TGG - chr1_2:63547218-63547237 Msa0084240:intron 40.0%
GAATACCATCAAGTTAGCAG+AGG + chr1_2:63547226-63547245 None:intergenic 40.0%
AGGTAAGATGTCAAAACTCC+AGG - chr1_2:63547597-63547616 Msa0084240:three_prime_UTR 40.0%
CCAAGTAGATCACCAAAGAA+TGG + chr1_2:63547724-63547743 None:intergenic 40.0%
! CCATTCTTTGGTGATCTACT+TGG - chr1_2:63547721-63547740 Msa0084240:three_prime_UTR 40.0%
GGTGATCTACTTGGATTCTT+TGG - chr1_2:63547730-63547749 Msa0084240:three_prime_UTR 40.0%
GATCTACTTGGATTCTTTGG+TGG - chr1_2:63547733-63547752 Msa0084240:three_prime_UTR 40.0%
!! CTTGGATTCTTTGGTGGATT+TGG - chr1_2:63540246-63540265 Msa0084240:intron 40.0%
TTCAGCTTCCTAGCATAATG+TGG - chr1_2:63547882-63547901 Msa0084240:three_prime_UTR 40.0%
! GCATCAACTGGTTCATCAAT+TGG - chr1_2:63547933-63547952 Msa0084240:CDS 40.0%
ATTATGCTGGCATCAACAGT+TGG - chr1_2:63548058-63548077 Msa0084240:intron 40.0%
! ACATGTTGAAGGCATAGTCT+AGG - chr1_2:63548250-63548269 Msa0084240:intron 40.0%
! TTAGAGAGTGGATTCTCTCT+TGG + chr1_2:63548400-63548419 None:intergenic 40.0%
CTCATTTGAGAGTTAGAGAG+TGG + chr1_2:63548412-63548431 None:intergenic 40.0%
TATAGTAATCCTAGAGGCCA+TGG - chr1_2:63548491-63548510 Msa0084240:intron 40.0%
! AAATGGCAAACATGGCTTGT+TGG - chr1_2:63548544-63548563 Msa0084240:intron 40.0%
! AGTGGTGGAATATGAGGTAA+GGG - chr1_2:63548585-63548604 Msa0084240:intron 40.0%
! TAGTAGAGTGGTGGAATATG+AGG - chr1_2:63548635-63548654 Msa0084240:intron 40.0%
! AGTGGTGGAATATGAGGTAA+AGG - chr1_2:63548585-63548604 Msa0084240:intron 40.0%
TAATCTGTATCATTCTCCCC+GGG - chr1_2:63548674-63548693 Msa0084240:intron 40.0%
CATCATCCAGATATGGTGAA+AGG - chr1_2:63548732-63548751 Msa0084240:intron 40.0%
ATCCAGATATGGTGAAAGGT+CGG - chr1_2:63548736-63548755 Msa0084240:intron 40.0%
!! GATGATGGAGTCAAGTCTAA+CGG - chr1_2:63549076-63549095 Msa0084240:intron 40.0%
!!! TGTCCTTTTGAGGTAGCATA+CGG + chr1_2:63549118-63549137 None:intergenic 40.0%
! GATTTTTACCGACAAAGCTC+CGG - chr1_2:63549212-63549231 Msa0084240:intron 40.0%
GACAAACTGAAGCTGTTAAC+AGG + chr1_2:63549255-63549274 None:intergenic 40.0%
TTCAGTTTGTCCATCTGTCT+GGG - chr1_2:63549264-63549283 Msa0084240:intron 40.0%
AGAACCTTATGGAGGAAGAT+GGG + chr1_2:63549322-63549341 None:intergenic 40.0%
ACTTTGTGCTTGGATTACCT+CGG + chr1_2:63549537-63549556 None:intergenic 40.0%
!!! AAAACCAGTGTTTTGGCCTT+TGG - chr1_2:63549606-63549625 Msa0084240:intron 40.0%
AAGATGTCGAGTATGCCATT+TGG + chr1_2:63549638-63549657 None:intergenic 40.0%
ATTATTTGGGAAGCCCATGA+TGG + chr1_2:63549760-63549779 None:intergenic 40.0%
ATCATGGGCTTCCCAAATAA+TGG - chr1_2:63549759-63549778 Msa0084240:intron 40.0%
CTCTACGAGAAGCCATTATT+TGG + chr1_2:63549774-63549793 None:intergenic 40.0%
!! AGAGCACTGAGGAATACATA+AGG - chr1_2:63549792-63549811 Msa0084240:intron 40.0%
! CATTGGATTTGAGACAGTCA+AGG + chr1_2:63549923-63549942 None:intergenic 40.0%
TCATTTGCATAGTGGCAAGT+AGG - chr1_2:63549947-63549966 Msa0084240:intron 40.0%
CATTTGCATAGTGGCAAGTA+GGG - chr1_2:63549948-63549967 Msa0084240:intron 40.0%
! GTCTGCGATTGATCTTTTGT+TGG - chr1_2:63550070-63550089 Msa0084240:intron 40.0%
GTAATGACTCCAATGTTGCA+AGG - chr1_2:63550152-63550171 Msa0084240:intron 40.0%
CACTAAAGAAGGCTATAGGA+TGG - chr1_2:63550241-63550260 Msa0084240:intron 40.0%
CACAACTTACTTCGAACACT+TGG - chr1_2:63550307-63550326 Msa0084240:intron 40.0%
TTCGAACACTTGGTCAAAGT+TGG - chr1_2:63550317-63550336 Msa0084240:intron 40.0%
TCGAACACTTGGTCAAAGTT+GGG - chr1_2:63550318-63550337 Msa0084240:intron 40.0%
CCGCTTACAGATTGCATAAA+GGG + chr1_2:63550429-63550448 None:intergenic 40.0%
CCCTTTATGCAATCTGTAAG+CGG - chr1_2:63550426-63550445 Msa0084240:intron 40.0%
CCTTTATGCAATCTGTAAGC+GGG - chr1_2:63550427-63550446 Msa0084240:intron 40.0%
CTTTATGCAATCTGTAAGCG+GGG - chr1_2:63550428-63550447 Msa0084240:intron 40.0%
TAGCTGTGATTATGTAACCC+AGG - chr1_2:63550589-63550608 Msa0084240:intron 40.0%
! ACCAACGAAGTTACTTTCCT+GGG + chr1_2:63550609-63550628 None:intergenic 40.0%
! AACCAACGAAGTTACTTTCC+TGG + chr1_2:63550610-63550629 None:intergenic 40.0%
! GGAAAGTAACTTCGTTGGTT+AGG - chr1_2:63550610-63550629 Msa0084240:intron 40.0%
! AGTAACTTCGTTGGTTAGGA+AGG - chr1_2:63550614-63550633 Msa0084240:intron 40.0%
CTTGATCTACAGCAAACACA+AGG + chr1_2:63550718-63550737 None:intergenic 40.0%
CAAGTACTTCGACCATTCAT+TGG + chr1_2:63550771-63550790 None:intergenic 40.0%
TTGATTCATGAGACGCATGA+AGG - chr1_2:63550788-63550807 Msa0084240:intron 40.0%
! TGGAGCATTAGATAACCCAA+AGG - chr1_2:63550815-63550834 Msa0084240:intron 40.0%
! GGAGCATTAGATAACCCAAA+GGG - chr1_2:63550816-63550835 Msa0084240:intron 40.0%
GATACCATCAAATCAGGCTT+AGG + chr1_2:63550905-63550924 None:intergenic 40.0%
GAAGTGGATACCATCAAATC+AGG + chr1_2:63550911-63550930 None:intergenic 40.0%
TCAAAGATCGATCTTCGAAG+TGG + chr1_2:63550927-63550946 None:intergenic 40.0%
AAAATTGCAGGAACAGCACA+AGG - chr1_2:63551080-63551099 Msa0084240:intron 40.0%
AAATTGCAGGAACAGCACAA+GGG - chr1_2:63551081-63551100 Msa0084240:intron 40.0%
TGTGGACTCATTCTATAAGC+TGG - chr1_2:63551173-63551192 Msa0084240:intron 40.0%
GACTCAATTCAAAGAAGCTG+TGG + chr1_2:63551390-63551409 None:intergenic 40.0%
! TTTTTATCAAGTCCACTCGG+TGG - chr1_2:63551449-63551468 Msa0084240:intron 40.0%
TCCATCTTTGACAAAGGAGT+AGG - chr1_2:63551496-63551515 Msa0084240:intron 40.0%
ACCTACTCCTTTGTCAAAGA+TGG + chr1_2:63551500-63551519 None:intergenic 40.0%
TTTGACAAAGGAGTAGGTGT+TGG - chr1_2:63551502-63551521 Msa0084240:intron 40.0%
AGAAGATGACATGCATCCAT+TGG - chr1_2:63551575-63551594 Msa0084240:intron 40.0%
TTGGTGTGATGTTGTTCCAA+TGG + chr1_2:63551594-63551613 None:intergenic 40.0%
CAACAAAGGTAGTGAAGTGA+AGG + chr1_2:63551672-63551691 None:intergenic 40.0%
GGATGAGGATGAATTTGTGT+TGG - chr1_2:63551710-63551729 Msa0084240:intron 40.0%
CAGTGGTAGTTGTGAAAATG+TGG + chr1_2:63551768-63551787 None:intergenic 40.0%
! ATCACAAACTTTTCCAGCAG+TGG - chr1_2:63551799-63551818 Msa0084240:intron 40.0%
CTTGAGCTGACATTGTATGT+AGG - chr1_2:63551864-63551883 Msa0084240:intron 40.0%
ATAAGCTTCGCCTTTGATGA+TGG - chr1_2:63552006-63552025 Msa0084240:intron 40.0%
AGAACCATCACCATCATCAA+AGG + chr1_2:63552019-63552038 None:intergenic 40.0%
ACCCAGTGTTTCAAATGTCA+AGG + chr1_2:63552076-63552095 None:intergenic 40.0%
! TTTGAAACACTGGGTAGCTT+TGG - chr1_2:63552081-63552100 Msa0084240:intron 40.0%
TTGAAACACTGGGTAGCTTT+GGG - chr1_2:63552082-63552101 Msa0084240:intron 40.0%
GGGATAAGAAGAATTCTCAG+TGG - chr1_2:63552174-63552193 Msa0084240:intron 40.0%
!! TACCCAAGAAGCGTTCTTAT+AGG + chr1_2:63552210-63552229 None:intergenic 40.0%
CGTCTAATGTCCAGTATTGT+TGG - chr1_2:63552266-63552285 Msa0084240:intron 40.0%
CAGTTCAACTCCAACAATAC+TGG + chr1_2:63552279-63552298 None:intergenic 40.0%
CAGTATTGTTGGAGTTGAAC+TGG - chr1_2:63552277-63552296 Msa0084240:intron 40.0%
CGTCAGTATTTAATCCACCA+AGG - chr1_2:63552308-63552327 Msa0084240:intron 40.0%
GAAGTGCGACATTCATGAAA+GGG + chr1_2:63552356-63552375 None:intergenic 40.0%
TGAAGTGCGACATTCATGAA+AGG + chr1_2:63552357-63552376 None:intergenic 40.0%
! CAGACAAGTTTTTCTGACGA+AGG - chr1_2:63552413-63552432 Msa0084240:CDS 40.0%
!!! GATCTTGCTTTTTCCTTCAC+GGG - chr1_2:63552522-63552541 Msa0084240:intron 40.0%
! TGAAGAAGCATGCTTCCATT+TGG + chr1_2:63552573-63552592 None:intergenic 40.0%
! ATTGGCTCCAAACTGTTGAA+CGG + chr1_2:63552654-63552673 None:intergenic 40.0%
ATCCAGATGAGTTCGTTGAT+TGG + chr1_2:63552672-63552691 None:intergenic 40.0%
ATTCAGAGACAACGACATCA+AGG + chr1_2:63552725-63552744 None:intergenic 40.0%
AACGTCTGATTGCATGTGTT+GGG - chr1_2:63552801-63552820 Msa0084240:CDS 40.0%
AGTGTTTGGTCGTTTCTTCT+TGG - chr1_2:63552907-63552926 Msa0084240:intron 40.0%
!! TTCTAGGAATTTTGGGTGAC+TGG - chr1_2:63553295-63553314 Msa0084240:CDS 40.0%
!! TCTAGGAATTTTGGGTGACT+GGG - chr1_2:63553296-63553315 Msa0084240:CDS 40.0%
! TTAGAGAGTGGATTCTCTCT+TGG + chr1_2:63548400-63548419 None:intergenic 40.0%
CTCATTTGAGAGTTAGAGAG+TGG + chr1_2:63548412-63548431 None:intergenic 40.0%
TATAGTAATCCTAGAGGCCA+TGG - chr1_2:63548491-63548510 Msa0084240:intron 40.0%
! AAATGGCAAACATGGCTTGT+TGG - chr1_2:63548544-63548563 Msa0084240:intron 40.0%
! AGTGGTGGAATATGAGGTAA+GGG - chr1_2:63548585-63548604 Msa0084240:intron 40.0%
! TAGTAGAGTGGTGGAATATG+AGG - chr1_2:63548635-63548654 Msa0084240:intron 40.0%
! AGTGGTGGAATATGAGGTAA+AGG - chr1_2:63548585-63548604 Msa0084240:intron 40.0%
TGAAACTGCAAGGATACCAA+AGG - chr1_2:63554143-63554162 Msa0084240:CDS 40.0%
GAAACTGCAAGGATACCAAA+GGG - chr1_2:63554144-63554163 Msa0084240:CDS 40.0%
CAAGGATACCAAAGGGAAAA+AGG - chr1_2:63554151-63554170 Msa0084240:CDS 40.0%
TTGGACCAAAACTTGGAGCA+TGG - chr1_2:63538940-63538959 Msa0084240:three_prime_UTR 45.0%
AGGGTGTGACACTGTCTATA+TGG - chr1_2:63538995-63539014 Msa0084240:intron 45.0%
TTGGAGGCTGATCCTTAATC+AGG + chr1_2:63539305-63539324 None:intergenic 45.0%
!! TGGCTTGCTTATCTAGAGGT+CGG - chr1_2:63539469-63539488 Msa0084240:intron 45.0%
TTCAGAGTCTTCAGTGCACT+TGG - chr1_2:63539543-63539562 Msa0084240:intron 45.0%
AACCCTCGAAGATACCAATG+TGG - chr1_2:63539640-63539659 Msa0084240:intron 45.0%
GCAGAAGCAATAAGCCATGA+AGG + chr1_2:63539783-63539802 None:intergenic 45.0%
! CAATGTTCTTGGTAGCTACC+AGG - chr1_2:63539821-63539840 Msa0084240:intron 45.0%
!! GCCTGTTTTCGACTTGATTG+AGG - chr1_2:63539997-63540016 Msa0084240:intron 45.0%
CCCTCAATCAAGTCGAAAAC+AGG + chr1_2:63540001-63540020 None:intergenic 45.0%
ACAAGTCTAAGCGCTACACT+AGG + chr1_2:63540052-63540071 None:intergenic 45.0%
! GGGGTGAGTTTTCCTTTCTT+TGG - chr1_2:63540216-63540235 Msa0084240:intron 45.0%
! CATCTACAATTGGTGGCTTG+AGG - chr1_2:63540619-63540638 Msa0084240:intron 45.0%
GTGTCAAGAGAGATGATGAG+TGG - chr1_2:63540937-63540956 Msa0084240:intron 45.0%
GATGATGAGTGGCTAGAAGT+AGG - chr1_2:63540948-63540967 Msa0084240:intron 45.0%
CGAGAGTGAATGAATGAGTG+AGG - chr1_2:63541339-63541358 Msa0084240:intron 45.0%
AGAAGACATGGAGAAGGACT+CGG - chr1_2:63541429-63541448 Msa0084240:intron 45.0%
GACGATGAATTCGAAGGTCT+AGG + chr1_2:63541494-63541513 None:intergenic 45.0%
! TGGGTTGACGATGAATTCGA+AGG + chr1_2:63541500-63541519 None:intergenic 45.0%
AACCCATAAATCAAAGGCGG+TGG - chr1_2:63541514-63541533 Msa0084240:intron 45.0%
! AGCCACCGCCTTTGATTTAT+GGG + chr1_2:63541519-63541538 None:intergenic 45.0%
! GGATGAATATGTGTTCTGGG+TGG - chr1_2:63541580-63541599 Msa0084240:intron 45.0%
! GTTTGATGCTTTTGATGCCC+GGG - chr1_2:63541625-63541644 Msa0084240:intron 45.0%
GGTGATGAAGAAATTGGGGT+TGG - chr1_2:63541932-63541951 Msa0084240:intron 45.0%
ATGATGAGTGGCTAGAAGCA+GGG + chr1_2:63542039-63542058 None:intergenic 45.0%
GTGTCAAGAGAGATGATGAG+TGG + chr1_2:63540937-63540956 None:intergenic 45.0%
AAAAACGTTGTGGTGGCAGA+CGG + chr1_2:63542116-63542135 None:intergenic 45.0%
CCGTTACAAAAACGTTGTGG+TGG + chr1_2:63542123-63542142 None:intergenic 45.0%
CTCCCGTTACAAAAACGTTG+TGG + chr1_2:63540862-63540881 None:intergenic 45.0%
! TTGTAACGGGAGTTAATGGG+AGG - chr1_2:63542134-63542153 Msa0084240:intron 45.0%
! TGTAACGGGAGTTAATGGGA+GGG - chr1_2:63542135-63542154 Msa0084240:intron 45.0%
AAGATTCAGGGTTCAAACCC+CGG - chr1_2:63543095-63543114 Msa0084240:intron 45.0%
!!! AAATTTTTTGGTGGTGGCCG+GGG + chr1_2:63543115-63543134 None:intergenic 45.0%
!!! CAAATTTTTTGGTGGTGGCC+GGG + chr1_2:63543116-63543135 None:intergenic 45.0%
!!! CCAAATTTTTTGGTGGTGGC+CGG + chr1_2:63543117-63543136 None:intergenic 45.0%
CTAAGATCTAGTGCACACTC+TGG + chr1_2:63543357-63543376 None:intergenic 45.0%
TACTTGAGACCGACAAAGCT+TGG + chr1_2:63543649-63543668 None:intergenic 45.0%
! GCTGTCGCTGTTTAACTTAG+TGG + chr1_2:63543847-63543866 None:intergenic 45.0%
TCTTGGTTAGGAATCCCACA+TGG - chr1_2:63544244-63544263 Msa0084240:intron 45.0%
ACGTTGTAACTAGACAGGGT+TGG - chr1_2:63544300-63544319 Msa0084240:intron 45.0%
AAGAGAAGACCCTAGGATGT+TGG + chr1_2:63544646-63544665 None:intergenic 45.0%
CTTAGAAGGTAGAGAAGGAG+TGG + chr1_2:63544705-63544724 None:intergenic 45.0%
CACTCCTTCTCTACCTTCTA+AGG - chr1_2:63544703-63544722 Msa0084240:three_prime_UTR 45.0%
GAAAGTCGAGTACCACCATT+TGG + chr1_2:63544905-63544924 None:intergenic 45.0%
CCTAGATATGCCATGGCATA+TGG + chr1_2:63544970-63544989 None:intergenic 45.0%
CCATATGCCATGGCATATCT+AGG - chr1_2:63544967-63544986 Msa0084240:three_prime_UTR 45.0%
ATGCCATGGCATATCTAGGA+TGG - chr1_2:63544971-63544990 Msa0084240:three_prime_UTR 45.0%
TCTTCTATATGTAGGGGTCC+AGG - chr1_2:63545068-63545087 Msa0084240:intron 45.0%
CCAGCTACATGAATGTGTAC+CGG - chr1_2:63545148-63545167 Msa0084240:three_prime_UTR 45.0%
CAGCTACATGAATGTGTACC+GGG - chr1_2:63545149-63545168 Msa0084240:three_prime_UTR 45.0%
TATCGATCGAAACGAGTTCC+CGG + chr1_2:63545170-63545189 None:intergenic 45.0%
!! TTGGACCAAAACTTGGTGCA+TGG - chr1_2:63545213-63545232 Msa0084240:intron 45.0%
GATATTTATGTTGGGCCACG+AGG - chr1_2:63545872-63545891 Msa0084240:three_prime_UTR 45.0%
CTCAATGTGGATGATCTTCC+GGG + chr1_2:63545902-63545921 None:intergenic 45.0%
GCTCAATGTGGATGATCTTC+CGG + chr1_2:63545903-63545922 None:intergenic 45.0%
ATGGTTGTTGTGGCTCAATG+TGG + chr1_2:63545915-63545934 None:intergenic 45.0%
TGGTGTGCAACTCAGTTGTA+TGG + chr1_2:63545934-63545953 None:intergenic 45.0%
TTGGTGTGTGGATATGTAGG+TGG + chr1_2:63546172-63546191 None:intergenic 45.0%
CCTTCACGTCCAACATCATT+GGG + chr1_2:63546196-63546215 None:intergenic 45.0%
ACCTTCACGTCCAACATCAT+TGG + chr1_2:63546197-63546216 None:intergenic 45.0%
AGCAGCGGCAAATAAACAGT+TGG - chr1_2:63546563-63546582 Msa0084240:intron 45.0%
TACAAGTCTAAGCGCTACAC+CGG + chr1_2:63540053-63540072 None:intergenic 45.0%
GTAGCTCGATCTGCTTATGT+AGG - chr1_2:63547577-63547596 Msa0084240:intron 45.0%
!!! GGGGTCACTTTTCCATTCTT+TGG - chr1_2:63547709-63547728 Msa0084240:three_prime_UTR 45.0%
TTTCAACTACCATGGCCTCT+AGG + chr1_2:63548503-63548522 None:intergenic 45.0%
! GAGTGGTGGAATATGAGGTA+AGG - chr1_2:63548584-63548603 Msa0084240:intron 45.0%
GGTAAGGGATGATGCAAGAT+AGG - chr1_2:63548600-63548619 Msa0084240:intron 45.0%
TGAAAGGTCGGCAACATTGA+AGG - chr1_2:63548748-63548767 Msa0084240:intron 45.0%
GTAGAATTGCCAGGAACCTA+TGG + chr1_2:63548785-63548804 None:intergenic 45.0%
GCTTACAAGGTAGAATTGCC+AGG + chr1_2:63548794-63548813 None:intergenic 45.0%
TTGAAAGGACCATCAGCTCT+TGG - chr1_2:63548839-63548858 Msa0084240:intron 45.0%
AAGTTGTCACCAAGAGCTGA+TGG + chr1_2:63548851-63548870 None:intergenic 45.0%
! ATCAGCTCTTGGTGACAACT+TGG - chr1_2:63548850-63548869 Msa0084240:intron 45.0%
! CTTGGTGACAACTTGGCATT+TGG - chr1_2:63548857-63548876 Msa0084240:intron 45.0%
TGCATGAACAAGTTCGCCAA+CGG + chr1_2:63549000-63549019 None:intergenic 45.0%
GTTCCGTATGCTACCTCAAA+AGG - chr1_2:63549112-63549131 Msa0084240:intron 45.0%
!! GGATTTTGGGAAACCTACTC+CGG + chr1_2:63549234-63549253 None:intergenic 45.0%
CTTCAGTTTGTCCATCTGTC+TGG - chr1_2:63549263-63549282 Msa0084240:intron 45.0%
TCAGTTTGTCCATCTGTCTG+GGG - chr1_2:63549265-63549284 Msa0084240:intron 45.0%
AGTACCCATCTTCCTCCATA+AGG - chr1_2:63549315-63549334 Msa0084240:intron 45.0%
GAGAACCTTATGGAGGAAGA+TGG + chr1_2:63549323-63549342 None:intergenic 45.0%
GGATTCTGTGATGGTAGTTG+TGG + chr1_2:63549500-63549519 None:intergenic 45.0%
CTACCATCACAGAATCCTTC+TGG - chr1_2:63549503-63549522 Msa0084240:intron 45.0%
GTTAGCATGGACTTTGTGCT+TGG + chr1_2:63549547-63549566 None:intergenic 45.0%
TCCATGCTAACATCTTCCCA+AGG - chr1_2:63549556-63549575 Msa0084240:intron 45.0%
ACCTTGGGAAGATGTTAGCA+TGG + chr1_2:63549560-63549579 None:intergenic 45.0%
! TCGAGTATGCCATTTGGCAA+AGG + chr1_2:63549632-63549651 None:intergenic 45.0%
!! GGAGGATTAGCAGGTCATTT+TGG + chr1_2:63549739-63549758 None:intergenic 45.0%
ACCTGCTAATCCTCCATCAT+GGG - chr1_2:63549744-63549763 Msa0084240:intron 45.0%
CAGGACTACTACAGACATGA+GGG + chr1_2:63549838-63549857 None:intergenic 45.0%
TCAGGACTACTACAGACATG+AGG + chr1_2:63549839-63549858 None:intergenic 45.0%
ATGTCTGTAGTAGTCCTGAG+AGG - chr1_2:63549840-63549859 Msa0084240:intron 45.0%
!! CACTGATTCACAATCCTCTC+AGG + chr1_2:63549857-63549876 None:intergenic 45.0%
CTGAGAGGATTGTGAATCAG+TGG - chr1_2:63549855-63549874 Msa0084240:intron 45.0%
TTGTTGCAGATGCTCTTAGC+AGG + chr1_2:63549981-63550000 None:intergenic 45.0%
TTCCAATTCAGGAATTGGCG+CGG + chr1_2:63550283-63550302 None:intergenic 45.0%
GACGCTTCCAATTCAGGAAT+TGG + chr1_2:63550288-63550307 None:intergenic 45.0%
AGTTGTGACGCTTCCAATTC+AGG + chr1_2:63550294-63550313 None:intergenic 45.0%
ACACTTGGTCAAAGTTGGGA+AGG - chr1_2:63550322-63550341 Msa0084240:intron 45.0%
CACTTGGTCAAAGTTGGGAA+GGG - chr1_2:63550323-63550342 Msa0084240:intron 45.0%
CCCGCTTACAGATTGCATAA+AGG + chr1_2:63550430-63550449 None:intergenic 45.0%
TGGAATAGGCCAACTGTTGA+TGG - chr1_2:63550533-63550552 Msa0084240:intron 45.0%
AGGTTGAAGCCATCAACAGT+TGG + chr1_2:63550545-63550564 None:intergenic 45.0%
! TTGATGGCTTCAACCTTGCT+GGG - chr1_2:63550549-63550568 Msa0084240:intron 45.0%
!! TATTCAAGTTGACCCCAGCA+AGG + chr1_2:63550565-63550584 None:intergenic 45.0%
ACCCAGGAAAGTAACTTCGT+TGG - chr1_2:63550605-63550624 Msa0084240:intron 45.0%
GATCTACAGCAAACACAAGG+AGG + chr1_2:63550715-63550734 None:intergenic 45.0%
!! ATGAGACGCATGAAGGTACT+TGG - chr1_2:63550795-63550814 Msa0084240:intron 45.0%
AATGGACAGTGATGCCCTTT+GGG + chr1_2:63550833-63550852 None:intergenic 45.0%
! TCTCCAGCTTCCATCCTTTT+TGG - chr1_2:63551052-63551071 Msa0084240:intron 45.0%
! CTCCAGCTTCCATCCTTTTT+GGG - chr1_2:63551053-63551072 Msa0084240:intron 45.0%
! TCCAGCTTCCATCCTTTTTG+GGG - chr1_2:63551054-63551073 Msa0084240:intron 45.0%
GTCGAAGAATTGCTGAGGAA+AGG + chr1_2:63551128-63551147 None:intergenic 45.0%
GTCAAGTCGAAGAATTGCTG+AGG + chr1_2:63551133-63551152 None:intergenic 45.0%
CTATTAGGAATGACAGCTCC+AGG - chr1_2:63551197-63551216 Msa0084240:intron 45.0%
GCATGTTGAATGTCTCGCAT+TGG - chr1_2:63551233-63551252 Msa0084240:intron 45.0%
TGTTGAATGTCTCGCATTGG+CGG - chr1_2:63551236-63551255 Msa0084240:intron 45.0%
AATCCTTGTGGAACAGCTTC+TGG - chr1_2:63551260-63551279 Msa0084240:intron 45.0%
ACAGCTTCTGGTACAACATC+TGG - chr1_2:63551272-63551291 Msa0084240:intron 45.0%
CAGCTTCTGGTACAACATCT+GGG - chr1_2:63551273-63551292 Msa0084240:intron 45.0%
TTAACTCCATTACCACCGAG+TGG + chr1_2:63551464-63551483 None:intergenic 45.0%
GATGCATGTCATCTTCTCCT+TGG + chr1_2:63551572-63551591 None:intergenic 45.0%
!! CTCAAGAAGAGCATTGGTTG+AGG + chr1_2:63551850-63551869 None:intergenic 45.0%
! TGTCAGCTCAAGAAGAGCAT+TGG + chr1_2:63551856-63551875 None:intergenic 45.0%
!! TTCGCCTTTGATGATGGTGA+TGG - chr1_2:63552012-63552031 Msa0084240:intron 45.0%
!! ATGGTGATGGTTCTTCGTGT+TGG - chr1_2:63552025-63552044 Msa0084240:intron 45.0%
!! ACTGTGGTGGGTTTAAGAGA+AGG - chr1_2:63552112-63552131 Msa0084240:intron 45.0%
CAAACAATCGCTCGTTACCT+TGG + chr1_2:63552328-63552347 None:intergenic 45.0%
GAAGCATGCTTCCATTTGGT+GGG + chr1_2:63552569-63552588 None:intergenic 45.0%
! AGAAGCATGCTTCCATTTGG+TGG + chr1_2:63552570-63552589 None:intergenic 45.0%
CAAAGACCCGTTCAACAGTT+TGG - chr1_2:63552644-63552663 Msa0084240:CDS 45.0%
TTGGCTCCAAACTGTTGAAC+GGG + chr1_2:63552653-63552672 None:intergenic 45.0%
AGCCAATCAACGAACTCATC+TGG - chr1_2:63552667-63552686 Msa0084240:intron 45.0%
CAACGTCTGATTGCATGTGT+TGG - chr1_2:63552800-63552819 Msa0084240:CDS 45.0%
GTTTGGTCGTTTCTTCTTGG+AGG - chr1_2:63552910-63552929 Msa0084240:intron 45.0%
CTGCAACCACAGAGCATAAT+AGG - chr1_2:63553022-63553041 Msa0084240:CDS 45.0%
! CTGGAGGTTTTTGTCACCAA+CGG + chr1_2:63553556-63553575 None:intergenic 45.0%
TGACAAAAACCTCCAGTCCA+AGG - chr1_2:63553560-63553579 Msa0084240:CDS 45.0%
! ACCTCCAGTCCAAGGTTTTT+CGG - chr1_2:63553568-63553587 Msa0084240:CDS 45.0%
ACCCTCGAAACTCTACTTTG+CGG + chr1_2:63553636-63553655 None:intergenic 45.0%
CTTGCACTCAAACTCAACTC+CGG - chr1_2:63553710-63553729 Msa0084240:intron 45.0%
CTCAAACTCAACTCCGGATT+TGG - chr1_2:63553716-63553735 Msa0084240:intron 45.0%
TCAGAGCAAGGTTCCAAATC+CGG + chr1_2:63553732-63553751 None:intergenic 45.0%
ACCTTGCTCTGATGCCAAAA+TGG - chr1_2:63553740-63553759 Msa0084240:intron 45.0%
! TCTTGGCTTCTGAGCCATTT+TGG + chr1_2:63553757-63553776 None:intergenic 45.0%
TTTCAACTACCATGGCCTCT+AGG + chr1_2:63548503-63548522 None:intergenic 45.0%
! GAGTGGTGGAATATGAGGTA+AGG - chr1_2:63548584-63548603 Msa0084240:intron 45.0%
GGTAAGGGATGATGCAAGAT+AGG - chr1_2:63548600-63548619 Msa0084240:intron 45.0%
!!! TTTTGTTAATAAAAAAAAAA+GGG - chr1_2:63546407-63546426 Msa0084240:intron 5.0%
!!! ATTTTTTTTTTTTTTTTGAA+GGG - chr1_2:63552934-63552953 Msa0084240:intron 5.0%
TATCGATCGAAACGAGTCCC+CGG + chr1_2:63538897-63538916 None:intergenic 50.0%
!! TGGGTGGCTTGCTTATCTAG+AGG - chr1_2:63539465-63539484 Msa0084240:intron 50.0%
!! GAGGGTTTCTCAGGTGTTGA+TGG + chr1_2:63539627-63539646 None:intergenic 50.0%
GGTATCTTCGAGGGTTTCTC+AGG + chr1_2:63539636-63539655 None:intergenic 50.0%
! GTTCTTGGTAGCTACCAGGT+AGG - chr1_2:63539825-63539844 Msa0084240:intron 50.0%
GTCTAAGCGCTACACTAGGA+GGG + chr1_2:63540048-63540067 None:intergenic 50.0%
AGTCTAAGCGCTACACTAGG+AGG + chr1_2:63540049-63540068 None:intergenic 50.0%
GTAGCTCGATCCGCTTATGT+AGG - chr1_2:63540070-63540089 Msa0084240:intron 50.0%
! TGTAACGGGAGTTAACGGGA+GGG + chr1_2:63540853-63540872 None:intergenic 50.0%
! TTGTAACGGGAGTTAACGGG+AGG + chr1_2:63540854-63540873 None:intergenic 50.0%
! CAGCCACCGCCTTTGATTTA+TGG + chr1_2:63541520-63541539 None:intergenic 50.0%
TGGGTGGTGCATCTCAGATT+CGG - chr1_2:63541596-63541615 Msa0084240:intron 50.0%
GATGATGAGTGGCTAGAAGC+AGG + chr1_2:63542040-63542059 None:intergenic 50.0%
ACACGTGGCGAAATGTGAGT+TGG + chr1_2:63542089-63542108 None:intergenic 50.0%
TGGGAGGGACGAATTGCAAA+CGG - chr1_2:63542150-63542169 Msa0084240:intron 50.0%
CCAACTGAGTTATGCTCACG+AGG + chr1_2:63543052-63543071 None:intergenic 50.0%
CCTCGTGAGCATAACTCAGT+TGG - chr1_2:63543049-63543068 Msa0084240:intron 50.0%
CCGGCCACCACCAAAAAATT+TGG - chr1_2:63543114-63543133 Msa0084240:intron 50.0%
CCGACAAAGCTTGGTCTGAT+CGG + chr1_2:63543640-63543659 None:intergenic 50.0%
! CCGATCAGACCAAGCTTTGT+CGG - chr1_2:63543637-63543656 Msa0084240:intron 50.0%
TCGAGTACCACCATTTGGCT+CGG + chr1_2:63544900-63544919 None:intergenic 50.0%
GTGGTACTCGACTTTCCACA+CGG - chr1_2:63544909-63544928 Msa0084240:three_prime_UTR 50.0%
GAGAACACCTGCACCTATCA+TGG + chr1_2:63544941-63544960 None:intergenic 50.0%
GATATGCCATGGCATATGGC+AGG + chr1_2:63544966-63544985 None:intergenic 50.0%
CCGGTACACATTCATGTAGC+TGG + chr1_2:63545151-63545170 None:intergenic 50.0%
CAGCAGCTGCGATGTCATTA+AGG - chr1_2:63545444-63545463 Msa0084240:intron 50.0%
!! GGCTTGGTGTGTGGATATGT+AGG + chr1_2:63546175-63546194 None:intergenic 50.0%
!! ACATCATTGGGCTTGGTGTG+TGG + chr1_2:63546184-63546203 None:intergenic 50.0%
CACACCAAGCCCAATGATGT+TGG - chr1_2:63546184-63546203 Msa0084240:intron 50.0%
ACGTCCAACATCATTGGGCT+TGG + chr1_2:63546191-63546210 None:intergenic 50.0%
CCCAATGATGTTGGACGTGA+AGG - chr1_2:63546193-63546212 Msa0084240:intron 50.0%
!! TGGGTGGCTTGCTTATCTAG+AGG - chr1_2:63539465-63539484 Msa0084240:intron 50.0%
GCAGAGGCAATAAGCCATGA+AGG + chr1_2:63547210-63547229 None:intergenic 50.0%
CCTGGTAGCTACCAACAACA+TGG + chr1_2:63547251-63547270 None:intergenic 50.0%
!! CCATGTTGTTGGTAGCTACC+AGG - chr1_2:63547248-63547267 Msa0084240:intron 50.0%
CGAAGATTGAACTTCCCTCC+CGG - chr1_2:63540031-63540050 Msa0084240:intron 50.0%
ACAAGTCTAAGCGCTACACC+GGG + chr1_2:63547559-63547578 None:intergenic 50.0%
ATGCTGGCATCAACAGTTGG+TGG - chr1_2:63548061-63548080 Msa0084240:intron 50.0%
!! CATCAACAGTTGGTGGCTTG+AGG - chr1_2:63548068-63548087 Msa0084240:intron 50.0%
AGGACGAGTTCTGTTCAACC+CGG + chr1_2:63548695-63548714 None:intergenic 50.0%
TGCCGACCTTTCACCATATC+TGG + chr1_2:63548741-63548760 None:intergenic 50.0%
GAAGGTTGCTGAGACACCAT+AGG - chr1_2:63548766-63548785 Msa0084240:intron 50.0%
!! GTCAAGTCTAACGGACTGTG+TGG - chr1_2:63549085-63549104 Msa0084240:intron 50.0%
! AACCTACTCCGGAGCTTTGT+CGG + chr1_2:63549223-63549242 None:intergenic 50.0%
CAGTTTGTCCATCTGTCTGG+GGG - chr1_2:63549266-63549285 Msa0084240:intron 50.0%
ACGCCAGAAGGATTCTGTGA+TGG + chr1_2:63549509-63549528 None:intergenic 50.0%
! ACATCTTCCCAAGGTGCTTC+TGG - chr1_2:63549565-63549584 Msa0084240:intron 50.0%
AAGGCCAAAGGCCAAAACAC+TGG + chr1_2:63549613-63549632 None:intergenic 50.0%
! TGCCATTTGGCAAAGGCCAA+AGG + chr1_2:63549625-63549644 None:intergenic 50.0%
GACCTGCTAATCCTCCATCA+TGG - chr1_2:63549743-63549762 Msa0084240:intron 50.0%
ATTTGGGAAGCCCATGATGG+AGG + chr1_2:63549757-63549776 None:intergenic 50.0%
GACTCCAATGTTGCAAGGCT+CGG - chr1_2:63550157-63550176 Msa0084240:intron 50.0%
TTGTCCGAGCCTTGCAACAT+TGG + chr1_2:63550164-63550183 None:intergenic 50.0%
ATGTTGCAAGGCTCGGACAA+TGG - chr1_2:63550164-63550183 Msa0084240:intron 50.0%
AACCGCGCCAATTCCTGAAT+TGG - chr1_2:63550278-63550297 Msa0084240:intron 50.0%
TTTGTGCTTGCTCGGTCCAT+TGG - chr1_2:63550394-63550413 Msa0084240:intron 50.0%
!! GTTGATGGCTTCAACCTTGC+TGG - chr1_2:63550548-63550567 Msa0084240:intron 50.0%
TGATGGCTTCAACCTTGCTG+GGG - chr1_2:63550550-63550569 Msa0084240:intron 50.0%
GAATGGACAGTGATGCCCTT+TGG + chr1_2:63550834-63550853 None:intergenic 50.0%
GCAGTCTTCCATTCATCTCC+TGG - chr1_2:63550879-63550898 Msa0084240:intron 50.0%
CATCAAATCAGGCTTAGGCC+AGG + chr1_2:63550900-63550919 None:intergenic 50.0%
! CTGGCCTAAGCCTGATTTGA+TGG - chr1_2:63550898-63550917 Msa0084240:intron 50.0%
TCCCCAAAAAGGATGGAAGC+TGG + chr1_2:63551058-63551077 None:intergenic 50.0%
GTACCAGAAGCTGTTCCACA+AGG + chr1_2:63551266-63551285 None:intergenic 50.0%
! TCAAGTCCACTCGGTGGTAA+TGG - chr1_2:63551455-63551474 Msa0084240:intron 50.0%
ATCTTCTCCTTGGAAGACCC+TGG + chr1_2:63551562-63551581 None:intergenic 50.0%
GAGCTCATTGTTGCTGACCA+TGG + chr1_2:63551914-63551933 None:intergenic 50.0%
ACAATCGCTCGTTACCTTGG+TGG + chr1_2:63552325-63552344 None:intergenic 50.0%
GTGCGACATTCATGAAAGGG+AGG + chr1_2:63552353-63552372 None:intergenic 50.0%
AAAACAAAGCGAGCCCGTGA+AGG + chr1_2:63552538-63552557 None:intergenic 50.0%
! TGACTTGTCGATGACTGGAC+AGG - chr1_2:63553362-63553381 Msa0084240:intron 50.0%
!! TGATGTGTCAGGTTGACACG+TGG - chr1_2:63553392-63553411 Msa0084240:intron 50.0%
CGTCTTCAACCTCTGACTTC+CGG - chr1_2:63553470-63553489 Msa0084240:CDS 50.0%
AAGGCCGAAAAACCTTGGAC+TGG + chr1_2:63553575-63553594 None:intergenic 50.0%
TTCGGAAGGCCGAAAAACCT+TGG + chr1_2:63553580-63553599 None:intergenic 50.0%
GCCGCAAAGTAGAGTTTCGA+GGG - chr1_2:63553632-63553651 Msa0084240:intron 50.0%
GCAAAGTAGAGTTTCGAGGG+TGG - chr1_2:63553635-63553654 Msa0084240:intron 50.0%
!! GCCATTTTGGCATCAGAGCA+AGG + chr1_2:63553744-63553763 None:intergenic 50.0%
CGACTTGATTGAGGGGACGA+TGG - chr1_2:63540006-63540025 Msa0084240:intron 55.0%
CGGGAGGGACGAATTGCAAA+CGG + chr1_2:63540838-63540857 None:intergenic 55.0%
ACACGTGGCGAAGTGTGAGT+TGG - chr1_2:63540899-63540918 Msa0084240:intron 55.0%
! GATGCTTTTGATGCCCGGGT+TGG - chr1_2:63541629-63541648 Msa0084240:intron 55.0%
AACGCGAGCTATCACCAACC+CGG + chr1_2:63541646-63541665 None:intergenic 55.0%
CTATCATGGCTGTCACCGTG+TGG + chr1_2:63544927-63544946 None:intergenic 55.0%
CACACGGTGACAGCCATGAT+AGG - chr1_2:63544925-63544944 Msa0084240:three_prime_UTR 55.0%
GTGACAGCCATGATAGGTGC+AGG - chr1_2:63544931-63544950 Msa0084240:three_prime_UTR 55.0%
TCTCAGCCTGCCATATGCCA+TGG - chr1_2:63544957-63544976 Msa0084240:three_prime_UTR 55.0%
AGCTAGCTCAGCAAGCACCA+AGG + chr1_2:63545543-63545562 None:intergenic 55.0%
! GGCAGAGTTCTGATTGGGTC+TGG + chr1_2:63546760-63546779 None:intergenic 55.0%
GACGAGTTCTGTTCAACCCG+GGG + chr1_2:63548693-63548712 None:intergenic 55.0%
GGACGAGTTCTGTTCAACCC+GGG + chr1_2:63548694-63548713 None:intergenic 55.0%
GCTGAGACACCATAGGTTCC+TGG - chr1_2:63548773-63548792 Msa0084240:intron 55.0%
TACCGACAAAGCTCCGGAGT+AGG - chr1_2:63549218-63549237 Msa0084240:intron 55.0%
!! TCCCAAGGTGCTTCTGGAAC+AGG - chr1_2:63549571-63549590 Msa0084240:intron 55.0%
!! CCCTGTTCCAGAAGCACCTT+GGG + chr1_2:63549575-63549594 None:intergenic 55.0%
!! CCCAAGGTGCTTCTGGAACA+GGG - chr1_2:63549572-63549591 Msa0084240:intron 55.0%
!! TCCCTGTTCCAGAAGCACCT+TGG + chr1_2:63549576-63549595 None:intergenic 55.0%
! GGCCTTTGGCCTTTGCCAAA+TGG - chr1_2:63549620-63549639 Msa0084240:intron 55.0%
! GCCCATGATGGAGGATTAGC+AGG + chr1_2:63549748-63549767 None:intergenic 55.0%
!! GCTTCTCGTAGAGAGCACTG+AGG - chr1_2:63549781-63549800 Msa0084240:intron 55.0%
TCAATCGCAGACATGCCGCT+TGG + chr1_2:63550062-63550081 None:intergenic 55.0%
GGCGCGGTTCTATGTCAAGA+AGG + chr1_2:63550267-63550286 None:intergenic 55.0%
! AAGTTGGGAAGGGCTAGCAC+TGG - chr1_2:63550333-63550352 Msa0084240:intron 55.0%
GGCTTAGGCCAGGAGATGAA+TGG + chr1_2:63550890-63550909 None:intergenic 55.0%
AGCACGACGATCGTATTGCC+AGG - chr1_2:63551541-63551560 Msa0084240:intron 55.0%
GCACGACGATCGTATTGCCA+GGG - chr1_2:63551542-63551561 Msa0084240:intron 55.0%
CGTATTGCCAGGGTCTTCCA+AGG - chr1_2:63551552-63551571 Msa0084240:intron 55.0%
CATACTCGTTGCACCACTGC+TGG + chr1_2:63551815-63551834 None:intergenic 55.0%
CAGCAGTGGTGCAACGAGTA+TGG - chr1_2:63551813-63551832 Msa0084240:intron 55.0%
TGATCACCAGAGACTCGCCA+TGG - chr1_2:63551894-63551913 Msa0084240:intron 55.0%
!! GTGGCTGACTTGTCGATGAC+TGG - chr1_2:63553357-63553376 Msa0084240:intron 55.0%
TGTCGATGACTGGACAGGTC+AGG - chr1_2:63553367-63553386 Msa0084240:intron 55.0%
GTCGATGACTGGACAGGTCA+GGG - chr1_2:63553368-63553387 Msa0084240:intron 55.0%
TCGATGACTGGACAGGTCAG+GGG - chr1_2:63553369-63553388 Msa0084240:intron 55.0%
!! TGTGTCAGGTTGACACGTGG+CGG - chr1_2:63553395-63553414 Msa0084240:CDS 55.0%
GACACGTGGCGGTAAGTGAT+TGG - chr1_2:63553406-63553425 Msa0084240:CDS 55.0%
! GATTGGCTGGAAGTGACACG+TGG - chr1_2:63553423-63553442 Msa0084240:CDS 55.0%
CTTCAACCTCTGACTTCCGG+TGG - chr1_2:63553473-63553492 Msa0084240:CDS 55.0%
! GCCGAAAAACCTTGGACTGG+AGG + chr1_2:63553572-63553591 None:intergenic 55.0%
TTTCGGCCTTCCGAACGCAA+TGG - chr1_2:63553585-63553604 Msa0084240:CDS 55.0%
ACTAACGCCGCCATTGCGTT+CGG + chr1_2:63553598-63553617 None:intergenic 55.0%
GGCCGCAAAGTAGAGTTTCG+AGG - chr1_2:63553631-63553650 Msa0084240:intron 55.0%
GTGGCAGACGGAAACACACG+TGG - chr1_2:63540884-63540903 Msa0084240:intron 60.0%
TCAAAGGCGGTGGCTGACAG+AGG - chr1_2:63541524-63541543 Msa0084240:intron 60.0%
ACGCGAGCTATCACCAACCC+GGG + chr1_2:63541645-63541664 None:intergenic 60.0%
GTGGCAGACGGAAACACACG+TGG + chr1_2:63540884-63540903 None:intergenic 60.0%
GTCTAAGCGCTACACCGGGA+GGG + chr1_2:63547555-63547574 None:intergenic 60.0%
AGTCTAAGCGCTACACCGGG+AGG + chr1_2:63547556-63547575 None:intergenic 60.0%
GCTAGTCACCCCCAGACAGA+TGG + chr1_2:63549277-63549296 None:intergenic 60.0%
! TCCTTCTGGCGTTGAGTCCG+AGG - chr1_2:63549517-63549536 Msa0084240:intron 60.0%
ACCTCGGACTCAACGCCAGA+AGG + chr1_2:63549521-63549540 None:intergenic 60.0%
!! GGTGCTTCTGGAACAGGGAG+TGG - chr1_2:63549577-63549596 Msa0084240:intron 60.0%
! CGCATTGGCGGCAATCCTTG+TGG - chr1_2:63551248-63551267 Msa0084240:intron 60.0%
TGCTGACCATGGCGAGTCTC+TGG + chr1_2:63551903-63551922 None:intergenic 60.0%
! TGGGTGACTGGGTGATGACG+TGG - chr1_2:63553307-63553326 Msa0084240:CDS 60.0%
! ACTGGGTGATGACGTGGCAC+AGG - chr1_2:63553313-63553332 Msa0084240:CDS 60.0%
! CTGGGTGATGACGTGGCACA+GGG - chr1_2:63553314-63553333 Msa0084240:CDS 60.0%
CAGGTCAGGGGTGATGTGTC+AGG - chr1_2:63553381-63553400 Msa0084240:intron 60.0%
CGTGGCGGTAAGTGATTGGC+TGG - chr1_2:63553410-63553429 Msa0084240:CDS 60.0%
GAAGTGACACGTGGCAGCTG+AGG - chr1_2:63553432-63553451 Msa0084240:CDS 60.0%
CAACCTCTGACTTCCGGTGG+CGG - chr1_2:63553476-63553495 Msa0084240:CDS 60.0%
! AACTCCGGCGAGGCGTTTGA+CGG - chr1_2:63553518-63553537 Msa0084240:CDS 60.0%
!! ACCATTTGGCTCGGCGAGCG+GGG + chr1_2:63544891-63544910 None:intergenic 65.0%
!! CACCATTTGGCTCGGCGAGC+GGG + chr1_2:63544892-63544911 None:intergenic 65.0%
!! CCACCATTTGGCTCGGCGAG+CGG + chr1_2:63544893-63544912 None:intergenic 65.0%
GATCTTCCGGGCTTCCCTCG+TGG + chr1_2:63545890-63545909 None:intergenic 65.0%
ACGTGGCACAGGGTGACACG+TGG - chr1_2:63553324-63553343 Msa0084240:intron 65.0%
GGTGACACGTGGCAGCGATG+TGG - chr1_2:63553335-63553354 Msa0084240:intron 65.0%
GACACGTGGCAGCGATGTGG+TGG - chr1_2:63553338-63553357 Msa0084240:intron 65.0%
GTGACACGTGGCAGCTGAGG+TGG - chr1_2:63553435-63553454 Msa0084240:CDS 65.0%
CAGCTGAGGTGGCTGCTGAC+TGG - chr1_2:63553446-63553465 Msa0084240:CDS 65.0%
TGGTGGTCCGGCGAGAACTC+CGG - chr1_2:63553503-63553522 Msa0084240:CDS 65.0%
AGGCGTTTGACGGCTCGTGG+AGG - chr1_2:63553528-63553547 Msa0084240:CDS 65.0%
CGGCCTTCCGAACGCAATGG+CGG - chr1_2:63553588-63553607 Msa0084240:CDS 65.0%
ACGCCGCCATTGCGTTCGGA+AGG + chr1_2:63553594-63553613 None:intergenic 65.0%
GGCGGTGGCTGACAGAGGTG+TGG - chr1_2:63541529-63541548 Msa0084240:intron 70.0%
CCGCTCGCCGAGCCAAATGG+TGG - chr1_2:63544890-63544909 Msa0084240:three_prime_UTR 70.0%
GTTGGGCCACGAGGGAAGCC+CGG - chr1_2:63545881-63545900 Msa0084240:three_prime_UTR 70.0%
! CCTCTGACTTCCGGTGGCGG+CGG - chr1_2:63553479-63553498 Msa0084240:CDS 70.0%
! CTCTGACTTCCGGTGGCGGC+GGG - chr1_2:63553480-63553499 Msa0084240:CDS 70.0%
CGAGCCGTCAAACGCCTCGC+CGG + chr1_2:63553525-63553544 None:intergenic 70.0%
! GCGAGGCGTTTGACGGCTCG+TGG - chr1_2:63553525-63553544 Msa0084240:CDS 70.0%
ACGGCTCGTGGAGGCTCCGT+TGG - chr1_2:63553537-63553556 Msa0084240:CDS 70.0%
GCCCCGCTCGCCGAGCCAAA+TGG - chr1_2:63544887-63544906 Msa0084240:three_prime_UTR 75.0%
CCGCCGCCACCGGAAGTCAG+AGG + chr1_2:63553482-63553501 None:intergenic 75.0%
! TGACTTCCGGTGGCGGCGGG+TGG - chr1_2:63553483-63553502 Msa0084240:CDS 75.0%
GTCCGGCGAGAACTCCGGCG+AGG - chr1_2:63553508-63553527 Msa0084240:CDS 75.0%
CGCCTCGCCGGAGTTCTCGC+CGG + chr1_2:63553513-63553532 None:intergenic 75.0%
!! CTTCCGGTGGCGGCGGGTGG+TGG - chr1_2:63553486-63553505 Msa0084240:CDS 80.0%
! GGACCACCACCCGCCGCCAC+CGG + chr1_2:63553492-63553511 None:intergenic 80.0%
!! GGTGGCGGCGGGTGGTGGTC+CGG - chr1_2:63553491-63553510 Msa0084240:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 63538879 63554182 63538879 ID=Msa0084240;Name=Msa0084240
chr1_2 mRNA 63538879 63554182 63538879 ID=Msa0084240-mRNA-1;Parent=Msa0084240;Name=Msa0084240-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.73|0.62|1|0.53|0.43|16|1437|360
chr1_2 exon 63538879 63538997 63538879 ID=Msa0084240-mRNA-1:exon:21318;Parent=Msa0084240-mRNA-1
chr1_2 exon 63544677 63545027 63544677 ID=Msa0084240-mRNA-1:exon:21317;Parent=Msa0084240-mRNA-1
chr1_2 exon 63545106 63545174 63545106 ID=Msa0084240-mRNA-1:exon:21316;Parent=Msa0084240-mRNA-1
chr1_2 exon 63545278 63545369 63545278 ID=Msa0084240-mRNA-1:exon:21315;Parent=Msa0084240-mRNA-1
chr1_2 exon 63545463 63545568 63545463 ID=Msa0084240-mRNA-1:exon:21314;Parent=Msa0084240-mRNA-1
chr1_2 exon 63545792 63546185 63545792 ID=Msa0084240-mRNA-1:exon:21313;Parent=Msa0084240-mRNA-1
chr1_2 exon 63547596 63547979 63547596 ID=Msa0084240-mRNA-1:exon:21312;Parent=Msa0084240-mRNA-1
chr1_2 exon 63548337 63548372 63548337 ID=Msa0084240-mRNA-1:exon:21311;Parent=Msa0084240-mRNA-1
chr1_2 exon 63552411 63552476 63552411 ID=Msa0084240-mRNA-1:exon:21310;Parent=Msa0084240-mRNA-1
chr1_2 exon 63552606 63552674 63552606 ID=Msa0084240-mRNA-1:exon:21309;Parent=Msa0084240-mRNA-1
chr1_2 exon 63552771 63552862 63552771 ID=Msa0084240-mRNA-1:exon:21308;Parent=Msa0084240-mRNA-1
chr1_2 exon 63552970 63553075 63552970 ID=Msa0084240-mRNA-1:exon:21307;Parent=Msa0084240-mRNA-1
chr1_2 exon 63553219 63553337 63553219 ID=Msa0084240-mRNA-1:exon:21306;Parent=Msa0084240-mRNA-1
chr1_2 exon 63553395 63553612 63553395 ID=Msa0084240-mRNA-1:exon:21305;Parent=Msa0084240-mRNA-1
chr1_2 exon 63553869 63554029 63553869 ID=Msa0084240-mRNA-1:exon:21304;Parent=Msa0084240-mRNA-1
chr1_2 exon 63554045 63554182 63554045 ID=Msa0084240-mRNA-1:exon:21303;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63554045 63554182 63554045 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63553869 63554029 63553869 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63553395 63553612 63553395 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63553219 63553337 63553219 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63552970 63553075 63552970 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63552771 63552862 63552771 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63552606 63552674 63552606 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63552411 63552476 63552411 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63548337 63548372 63548337 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 CDS 63547902 63547979 63547902 ID=Msa0084240-mRNA-1:cds;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63547596 63547901 63547596 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63545792 63546185 63545792 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63545463 63545568 63545463 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63545278 63545369 63545278 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63545106 63545174 63545106 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63544677 63545027 63544677 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
chr1_2 three_prime_UTR 63538879 63538997 63538879 ID=Msa0084240-mRNA-1:three_prime_utr;Parent=Msa0084240-mRNA-1
Gene Sequence

>Msa0084240

CTACATGAATGCGTACCGGGGACTCGTTTCGATCGATATATTGATCTTGGTAGACATGCTTTTGGACCAAAACTTGGAGCATGGATTGTTCTACCTCAGCAACTGATTGTACAAGTAGGGTGTGACACTGTCTATATGTGTCTAAAGAATTTTGTTGAGATAGCATTCATCAATTGTACACAAATCAAGCAGACTTATTGGATTATGATTTTTGGTGGCATCCATTTTTTTCTGTCTCAGCTTCCCAATTTCAATTCTGTTTCTGGTGTTTCTTTAGCAGCATCTGTGATGTCATTAAGCTATTCAACTATAGCATGGGTGGCTTGCTTATCTAGAGGTCGGATTGACAATGTTAGCTATGCATACAAGCAAATAAGCAAAACTGATTTATTGTTCAGAGTCTTCAGTGCACTTGGTCAAATCTCATTTGCATTTTCTGGCCAAGCAGTGACACTTGAAATTCAGGCTACAATTCCATCAACACCTGAGAAACCCTCGAAGATACCAATGTGGAAAGGATATTGGGCTTTTGGACAAGATGTTGATGATAATATACTTATGTCACTTGAAAGACCTTCATGGCTTATTGCTTCTGCTAATTTGATGGTATTCATCAATGTTCTTGGTAGCTACCAGGTTTATGCCATGCCTGTTTTCGACTTGATTGAGGGGACGATGGTTCGAAGATTGAACTTCCCTCCTAGTGTAGCGCTTAGACTTGTAGCTCGATCCGCTTATGTAGCTTTTACATTATTATTTGGGGTGAGTTTTCCTTTCTTTGGAGATCTTCTTGGATTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGTATAATGTGGTTGATAATCAAGAAGCCAAGGAGATTCAGTATCAACTGGTTCATCAATTGGGCTGCAATTTGCATAGGTGTGTGTATTATGTTGGCATCTACAATTGGTGGCTTGAGGAACATTATTCTAAAAATGGTTTCCACTCCTTCTCTACCTTCTAAGGGGTCCAGGAATCTTGATGTTGTTACTATCATGGTGTTTAACATTAAACACAATGTGGCAAATGATCCAGCTACATGA
Protein sequence

>Msa0084240

LHECVPGTRFDRYIDLGRHAFGPKLGAWIVLPQQLIVQVGCDTVYMCLKNFVEIAFINCTQIKQTYWIMIFGGIHFFLSQLPNFNSVSGVSLAASVMSLSYSTIAWVACLSRGRIDNVSYAYKQISKTDLLFRVFSALGQISFAFSGQAVTLEIQATIPSTPEKPSKIPMWKGYWAFGQDVDDNILMSLERPSWLIASANLMVFINVLGSYQVYAMPVFDLIEGTMVRRLNFPPSVALRLVARSAYVAFTLLFGVSFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPRRFSINWFINWAAICIGVCIMLASTIGGLRNIILKMVSTPSLPSKGSRNLDVVTIMVFNIKHNVANDPAT*