Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084480 | XP_013469353.1 | 94.867 | 526 | 4 | 1 | 1 | 503 | 1 | 526 | 0.0 | 1014 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084480 | sp|Q2RAK2|KPYC1_ORYSJ | 79.886 | 527 | 82 | 2 | 1 | 503 | 1 | 527 | 0.0 | 869 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084480 | A0A072VP40 | 94.867 | 526 | 4 | 1 | 1 | 503 | 1 | 526 | 0.0 | 1014 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035740 | Msa0084480 | 0.814728 | 1.329231e-51 | -8.615850e-47 |
| Msa0084480 | Msa1396110 | 0.811411 | 7.094536e-51 | -8.615850e-47 |
| Msa0084480 | Msa1420830 | 0.806272 | 8.917726e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084480 | MtrunA17_Chr1g0197911 | 94.867 | 526 | 4 | 1 | 1 | 503 | 1 | 526 | 0.0 | 1014 |
| Msa0084480 | MtrunA17_Chr7g0265591 | 78.368 | 527 | 90 | 2 | 1 | 503 | 1 | 527 | 0.0 | 865 |
| Msa0084480 | MtrunA17_Chr1g0179541 | 77.127 | 529 | 79 | 4 | 1 | 503 | 1 | 513 | 0.0 | 830 |
| Msa0084480 | MtrunA17_Chr6g0448901 | 41.212 | 495 | 255 | 8 | 30 | 498 | 22 | 506 | 5.20e-119 | 359 |
| Msa0084480 | MtrunA17_Chr7g0263711 | 40.388 | 515 | 266 | 10 | 14 | 502 | 1 | 500 | 8.59e-115 | 348 |
| Msa0084480 | MtrunA17_Chr4g0043311 | 40.080 | 499 | 263 | 8 | 30 | 502 | 9 | 497 | 9.08e-114 | 345 |
| Msa0084480 | MtrunA17_Chr4g0043301 | 40.000 | 515 | 268 | 10 | 14 | 502 | 1 | 500 | 5.43e-112 | 340 |
| Msa0084480 | MtrunA17_Chr5g0400361 | 29.756 | 410 | 256 | 11 | 30 | 430 | 79 | 465 | 9.85e-46 | 167 |
| Msa0084480 | MtrunA17_Chr1g0206791 | 26.915 | 483 | 313 | 12 | 30 | 490 | 18 | 482 | 4.73e-45 | 165 |
| Msa0084480 | MtrunA17_Chr6g0463101 | 29.952 | 414 | 269 | 12 | 21 | 431 | 99 | 494 | 1.02e-43 | 162 |
| Msa0084480 | MtrunA17_Chr1g0202291 | 28.960 | 404 | 267 | 11 | 30 | 430 | 105 | 491 | 2.60e-42 | 159 |
| Msa0084480 | MtrunA17_Chr1g0188101 | 27.010 | 485 | 305 | 12 | 30 | 485 | 91 | 555 | 2.75e-42 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084480 | AT3G52990.1 | 77.799 | 527 | 93 | 2 | 1 | 503 | 1 | 527 | 0.0 | 853 |
| Msa0084480 | AT2G36580.1 | 77.230 | 527 | 96 | 2 | 1 | 503 | 1 | 527 | 0.0 | 842 |
| Msa0084480 | AT3G52990.2 | 78.270 | 474 | 79 | 2 | 54 | 503 | 1 | 474 | 0.0 | 775 |
| Msa0084480 | AT5G63680.3 | 41.818 | 495 | 252 | 8 | 30 | 498 | 22 | 506 | 9.55e-117 | 353 |
| Msa0084480 | AT5G63680.1 | 41.818 | 495 | 252 | 8 | 30 | 498 | 22 | 506 | 9.55e-117 | 353 |
| Msa0084480 | AT5G63680.2 | 41.818 | 495 | 252 | 8 | 30 | 498 | 22 | 506 | 9.55e-117 | 353 |
| Msa0084480 | AT5G08570.1 | 41.818 | 495 | 252 | 10 | 30 | 498 | 22 | 506 | 1.14e-114 | 348 |
| Msa0084480 | AT5G08570.2 | 41.818 | 495 | 252 | 10 | 30 | 498 | 22 | 506 | 1.14e-114 | 348 |
| Msa0084480 | AT5G08570.3 | 41.818 | 495 | 252 | 10 | 30 | 498 | 22 | 506 | 1.14e-114 | 348 |
| Msa0084480 | AT5G56350.1 | 40.927 | 496 | 257 | 9 | 30 | 499 | 10 | 495 | 1.40e-112 | 342 |
| Msa0084480 | AT3G04050.1 | 39.243 | 502 | 267 | 7 | 30 | 502 | 18 | 510 | 2.68e-109 | 334 |
| Msa0084480 | AT4G26390.1 | 39.679 | 499 | 265 | 8 | 30 | 502 | 9 | 497 | 2.74e-109 | 334 |
| Msa0084480 | AT3G25960.1 | 40.202 | 495 | 259 | 8 | 30 | 502 | 18 | 497 | 4.50e-109 | 333 |
| Msa0084480 | AT3G55650.1 | 40.040 | 502 | 263 | 7 | 30 | 502 | 18 | 510 | 1.53e-108 | 332 |
| Msa0084480 | AT3G55810.1 | 37.450 | 502 | 258 | 8 | 30 | 502 | 18 | 492 | 3.66e-96 | 300 |
| Msa0084480 | AT1G32440.1 | 30.370 | 405 | 261 | 10 | 30 | 431 | 101 | 487 | 5.48e-46 | 169 |
| Msa0084480 | AT5G52920.1 | 28.986 | 414 | 273 | 12 | 21 | 431 | 104 | 499 | 1.65e-41 | 157 |
| Msa0084480 | AT3G22960.1 | 25.979 | 485 | 308 | 13 | 30 | 485 | 119 | 581 | 3.60e-38 | 147 |
Find 141 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAATGTCCATTCATTTA+AGG | 0.141161 | 1_2:+63960645 | Msa0084480:five_prime_UTR |
| AAGAGACATTGGAAAATTTA+AGG | 0.150763 | 1_2:+63963617 | Msa0084480:CDS |
| CATTGTCTCTCGTGGAAATT+TGG | 0.157630 | 1_2:+63965741 | Msa0084480:CDS |
| CTGCTTGAGGTCTTCAAATT+TGG | 0.167564 | 1_2:-63965504 | None:intergenic |
| ATAGCCTTAATACCATTTAT+TGG | 0.171309 | 1_2:+63960700 | Msa0084480:five_prime_UTR |
| ACCATTTATTGGACTTTCTA+AGG | 0.192913 | 1_2:+63960711 | Msa0084480:five_prime_UTR |
| CTGATGAGTCACCAACTTTC+TGG | 0.207944 | 1_2:-63967647 | None:intergenic |
| CTTGGGGCAGAGACCCTTAC+TGG | 0.238060 | 1_2:+63966408 | Msa0084480:CDS |
| AATGTCTCTTGGTGGTATTC+TGG | 0.238537 | 1_2:-63963604 | None:intergenic |
| TTATTCACAACTTGTAATTC+TGG | 0.247271 | 1_2:-63963879 | None:intergenic |
| GAAAGGCCGCTAAAATTTAC+TGG | 0.264525 | 1_2:-63963987 | None:intergenic |
| TGCTTCTTGAGGAACCTATT+AGG | 0.292663 | 1_2:+63961973 | Msa0084480:CDS |
| TGGCAGAATATATTGATCTA+TGG | 0.325317 | 1_2:-63960774 | None:intergenic |
| AAGTCCAATAAATGGTATTA+AGG | 0.331325 | 1_2:-63960704 | None:intergenic |
| ATTGTCTCTCGTGGAAATTT+GGG | 0.332252 | 1_2:+63965742 | Msa0084480:CDS |
| GTGTCTGCTTCAAGGGTAAT+TGG | 0.332260 | 1_2:-63963912 | None:intergenic |
| TTAGACCATGGCAAGGCCTT+TGG | 0.337561 | 1_2:+63967591 | Msa0084480:CDS |
| TAGAGTCCAACCAAGATATT+AGG | 0.337644 | 1_2:+63960913 | Msa0084480:five_prime_UTR |
| GTGCAGGCCGAGTCGAATAC+TGG | 0.339617 | 1_2:+63967540 | Msa0084480:intron |
| TCCTTAGAAAGTCCAATAAA+TGG | 0.360771 | 1_2:-63960712 | None:intergenic |
| AGAGACATTGGAAAATTTAA+GGG | 0.372740 | 1_2:+63963618 | Msa0084480:CDS |
| AGGATGGAAGCCATCCTAAT+AGG | 0.392259 | 1_2:-63961987 | None:intergenic |
| ATCATCTGCTTCACCTCATC+TGG | 0.394382 | 1_2:+63966961 | Msa0084480:CDS |
| CAGTCTTGTTAATCAAGCTC+TGG | 0.401320 | 1_2:+63960844 | Msa0084480:five_prime_UTR |
| ACCACACGTGTGACAACAAC+GGG | 0.403478 | 1_2:-63966048 | None:intergenic |
| GAAGGAGATACTGACAGGTT+TGG | 0.405452 | 1_2:-63962018 | None:intergenic |
| TAAGAAGACTGTCAAATTTG+TGG | 0.413491 | 1_2:+63966762 | Msa0084480:CDS |
| ACTGCCATTACCTAATATCT+TGG | 0.415125 | 1_2:-63960923 | None:intergenic |
| AAGAAGACTGTCAAATTTGT+GGG | 0.415739 | 1_2:+63966763 | Msa0084480:CDS |
| ATTGTTGTTCCTTAAATGAA+TGG | 0.419000 | 1_2:-63960654 | None:intergenic |
| GGCCGCAGATCAACACAGTT+GGG | 0.421279 | 1_2:-63960883 | None:intergenic |
| GTAGCTTCTTTGTTCTGATC+CGG | 0.423082 | 1_2:-63963951 | None:intergenic |
| GCAGTGATGCAATTCTCCTT+GGG | 0.424846 | 1_2:+63966391 | Msa0084480:CDS |
| AATATATTCTGCCAAGTTCA+AGG | 0.427231 | 1_2:+63960783 | Msa0084480:five_prime_UTR |
| AAGTAAATACCGACCTTCTC+AGG | 0.427575 | 1_2:-63965778 | None:intergenic |
| GCCACTAGATCGAACAAGAT+AGG | 0.427617 | 1_2:-63960614 | None:intergenic |
| TCGAGCAGCCGTCAAGGTTA+AGG | 0.439602 | 1_2:+63966930 | Msa0084480:CDS |
| ATTTAAGGAACAACAATCAA+TGG | 0.443595 | 1_2:+63960660 | Msa0084480:five_prime_UTR |
| ACCGTAGAAATGGTTTCTAC+AGG | 0.447584 | 1_2:-63966438 | None:intergenic |
| CAAGTGATGTGTCTGCTTCA+AGG | 0.449834 | 1_2:-63963920 | None:intergenic |
| GGCAGTGATGCAATTCTCCT+TGG | 0.450255 | 1_2:+63966390 | Msa0084480:intron |
| GGCGAACATCTTCAGCGTGC+CGG | 0.459359 | 1_2:-63965248 | None:intergenic |
| GTCAAGCCCTTTGCTTCTTG+AGG | 0.460501 | 1_2:+63961962 | Msa0084480:CDS |
| CGATGTTGCCAATGCAGTAT+TGG | 0.462920 | 1_2:+63966116 | Msa0084480:CDS |
| GCGAACATCTTCAGCGTGCC+GGG | 0.463044 | 1_2:-63965247 | None:intergenic |
| TCGCACGGTTTGACTTCTCA+TGG | 0.464685 | 1_2:+63963575 | Msa0084480:CDS |
| TCTTCCTACTCTTACTGATA+AGG | 0.470694 | 1_2:+63964780 | Msa0084480:CDS |
| TGTCTGCTTCAAGGGTAATT+GGG | 0.470997 | 1_2:-63963911 | None:intergenic |
| AAGATCTTCAGCCTTGAACT+TGG | 0.471732 | 1_2:-63960794 | None:intergenic |
| CCATTACCTAATATCTTGGT+TGG | 0.471830 | 1_2:-63960919 | None:intergenic |
| CGCACGGTTTGACTTCTCAT+GGG | 0.476370 | 1_2:+63963576 | Msa0084480:CDS |
| AACAGATGCCTTAACCTTGA+CGG | 0.480991 | 1_2:-63966938 | None:intergenic |
| GACTTTCTAAGGAACATAAG+AGG | 0.482626 | 1_2:+63960722 | Msa0084480:five_prime_UTR |
| TTGGTTGGACTCTATAGATC+TGG | 0.484551 | 1_2:-63960904 | None:intergenic |
| ACCTATCTTGTTCGATCTAG+TGG | 0.488205 | 1_2:+63960613 | Msa0084480:five_prime_UTR |
| ATCGGTAAATATCTGTTCAC+AGG | 0.490915 | 1_2:+63964184 | Msa0084480:CDS |
| GTAGAAACCATTTCTACGGT+TGG | 0.499806 | 1_2:+63966441 | Msa0084480:CDS |
| CCCTGTAGAAACCATTTCTA+CGG | 0.501840 | 1_2:+63966437 | Msa0084480:CDS |
| AAATTTGGAGATATATTCAC+GGG | 0.502345 | 1_2:-63965489 | None:intergenic |
| AAGTGATGTGTCTGCTTCAA+GGG | 0.505911 | 1_2:-63963919 | None:intergenic |
| ACATTTCTGCATCAAGGCAT+CGG | 0.507575 | 1_2:-63962910 | None:intergenic |
| TGTCGAGGATCCGCCAGCAT+AGG | 0.508898 | 1_2:-63967346 | None:intergenic |
| GAAGTGAAACAACTTCTGTA+TGG | 0.510806 | 1_2:+63964206 | Msa0084480:CDS |
| ACAATCAATGGTGTGGAGAA+TGG | 0.510807 | 1_2:+63960672 | Msa0084480:five_prime_UTR |
| TGTTAATCAAGCTCTGGTGG+TGG | 0.511263 | 1_2:+63960850 | Msa0084480:five_prime_UTR |
| TAGATCGAACAAGATAGGTT+TGG | 0.516324 | 1_2:-63960609 | None:intergenic |
| CATTTCTGCATCAAGGCATC+GGG | 0.518040 | 1_2:-63962909 | None:intergenic |
| TCTTACTGATAAGGATAAAG+AGG | 0.518845 | 1_2:+63964789 | Msa0084480:CDS |
| GTCGAGGATCCGCCAGCATA+GGG | 0.522821 | 1_2:-63967345 | None:intergenic |
| CTACAGGGTATAATCCAGTA+AGG | 0.529033 | 1_2:-63966422 | None:intergenic |
| CTGCTTCACCTCATCTGGAA+GGG | 0.535094 | 1_2:+63966966 | Msa0084480:CDS |
| ATTTATAAGTGTAACATGGC+GGG | 0.535820 | 1_2:+63966021 | Msa0084480:CDS |
| CAAATTTGGAGATATATTCA+CGG | 0.536091 | 1_2:-63965490 | None:intergenic |
| CCTCATCTGGAAGGGCTGCA+AGG | 0.537274 | 1_2:+63966974 | Msa0084480:CDS |
| TAGGTTCCTCAAGAAGCAAA+GGG | 0.537810 | 1_2:-63961968 | None:intergenic |
| TGCCTTGATGCAGAAATGTC+TGG | 0.542554 | 1_2:+63962914 | Msa0084480:CDS |
| ATTACCATCCAATACTGCAT+TGG | 0.545679 | 1_2:-63966124 | None:intergenic |
| CAGGTTATGCTAGATACTGT+TGG | 0.545733 | 1_2:+63963855 | Msa0084480:intron |
| TTGAAGGTTGCTTTAGACCA+TGG | 0.546113 | 1_2:+63967579 | Msa0084480:CDS |
| TGACAGGTTTGGATGGCTCT+AGG | 0.546806 | 1_2:-63962007 | None:intergenic |
| TACCAGACATTTCTGCATCA+AGG | 0.547165 | 1_2:-63962916 | None:intergenic |
| TCTTGAGGAACCTATTAGGA+TGG | 0.548539 | 1_2:+63961977 | Msa0084480:CDS |
| TGGCCGCAGATCAACACAGT+TGG | 0.550285 | 1_2:-63960884 | None:intergenic |
| ATAGGTTCCTCAAGAAGCAA+AGG | 0.550497 | 1_2:-63961969 | None:intergenic |
| AGAATACCACCAAGAGACAT+TGG | 0.551827 | 1_2:+63963606 | Msa0084480:CDS |
| AGGTTTGGATGGCTCTAGGA+TGG | 0.555270 | 1_2:-63962003 | None:intergenic |
| ATTGATTCCATGTGGCTCAT+CGG | 0.557927 | 1_2:-63966790 | None:intergenic |
| TGCAAAGATCGAAAATGTAG+AGG | 0.564673 | 1_2:+63965538 | Msa0084480:CDS |
| ATCATTCTTACAGGGTGTCG+AGG | 0.564881 | 1_2:-63967361 | None:intergenic |
| TCTGCTTCACCTCATCTGGA+AGG | 0.565181 | 1_2:+63966965 | Msa0084480:CDS |
| ACAGATATCACAGGCATGGT+TGG | 0.565703 | 1_2:-63967232 | None:intergenic |
| GAGATACTGACAGGTTTGGA+TGG | 0.565861 | 1_2:-63962014 | None:intergenic |
| ATACAGGTCAGCGAGGTGAA+TGG | 0.567535 | 1_2:+63964673 | Msa0084480:intron |
| GATGGTATCATTGTCTCTCG+TGG | 0.568066 | 1_2:+63965733 | Msa0084480:CDS |
| AACTCAGGTAATACGCACAT+GGG | 0.568313 | 1_2:+63965188 | Msa0084480:intron |
| CCGTAGAAATGGTTTCTACA+GGG | 0.569637 | 1_2:-63966437 | None:intergenic |
| TCTTGTTAATCAAGCTCTGG+TGG | 0.575407 | 1_2:+63960847 | Msa0084480:five_prime_UTR |
| GTTGTTGTTTGCCAGAAAGT+TGG | 0.576382 | 1_2:+63967636 | Msa0084480:CDS |
| GATAGATCTCCCACCTGAGA+AGG | 0.576840 | 1_2:+63965765 | Msa0084480:CDS |
| ATCATGCAGGCTGTGAAGAA+AGG | 0.581893 | 1_2:+63964148 | Msa0084480:intron |
| CCTTGCAGCCCTTCCAGATG+AGG | 0.586363 | 1_2:-63966974 | None:intergenic |
| TGATTCCAAAGGCCTTGCCA+TGG | 0.589477 | 1_2:-63967596 | None:intergenic |
| GCCGCAGATCAACACAGTTG+GGG | 0.589942 | 1_2:-63960882 | None:intergenic |
| TTATCCTTATCAGTAAGAGT+AGG | 0.591542 | 1_2:-63964784 | None:intergenic |
| CAATACTGCATTGGCAACAT+CGG | 0.597566 | 1_2:-63966115 | None:intergenic |
| ACAGGTTCGAGCAGCCGTCA+AGG | 0.598249 | 1_2:+63966924 | Msa0084480:intron |
| CTTGCCATATGCTAGTCGCA+CGG | 0.598729 | 1_2:+63963560 | Msa0084480:intron |
| CTTTCTGGCAAACAACAACT+CGG | 0.599279 | 1_2:-63967632 | None:intergenic |
| CACATCACTTGTCTTAACTC+CGG | 0.600633 | 1_2:+63963932 | Msa0084480:CDS |
| AGGAACAACAATCAATGGTG+TGG | 0.605200 | 1_2:+63960665 | Msa0084480:five_prime_UTR |
| ACTTCCTCTCATTGTACACC+CGG | 0.609200 | 1_2:+63965229 | Msa0084480:CDS |
| AAGGTAGACTGACCTTTGAA+AGG | 0.609390 | 1_2:-63964004 | None:intergenic |
| ATAAAATGCACTAATTAGAG+TGG | 0.611335 | 1_2:+63967719 | Msa0084480:three_prime_UTR |
| GAGATATTGAGAGAAGCAGA+TGG | 0.612258 | 1_2:+63965715 | Msa0084480:CDS |
| TTGTCTCTCGTGGAAATTTG+GGG | 0.612945 | 1_2:+63965743 | Msa0084480:CDS |
| ATTTGATCCAGTATTCGACT+CGG | 0.615265 | 1_2:-63967547 | None:intergenic |
| TAACTCAGGTAATACGCACA+TGG | 0.616069 | 1_2:+63965187 | Msa0084480:intron |
| TAAATACCGACCTTCTCAGG+TGG | 0.626269 | 1_2:-63965775 | None:intergenic |
| GCCCGTTGTTGTCACACGTG+TGG | 0.628308 | 1_2:+63966047 | Msa0084480:CDS |
| GACGACAGATATCACAGGCA+TGG | 0.630625 | 1_2:-63967236 | None:intergenic |
| AGGCAGTCACTTATTGTGAG+AGG | 0.633289 | 1_2:+63967316 | Msa0084480:CDS |
| GCACGGTTTGACTTCTCATG+GGG | 0.634012 | 1_2:+63963577 | Msa0084480:CDS |
| CGTGCCGGGTGTACAATGAG+AGG | 0.635057 | 1_2:-63965233 | None:intergenic |
| CAGTAAGGGTCTCTGCCCCA+AGG | 0.637264 | 1_2:-63966407 | None:intergenic |
| TACAGGGTATAATCCAGTAA+GGG | 0.637369 | 1_2:-63966421 | None:intergenic |
| GACCACACGTGTGACAACAA+CGG | 0.637756 | 1_2:-63966049 | None:intergenic |
| GGGAGAGCCGATGAGCCACA+TGG | 0.643980 | 1_2:+63966783 | Msa0084480:CDS |
| TCGGTTGCTTCAGCACGAGT+AGG | 0.643981 | 1_2:-63966096 | None:intergenic |
| AACAACTTCTGTATGGCTAG+AGG | 0.646199 | 1_2:+63964213 | Msa0084480:CDS |
| AAATACCGACCTTCTCAGGT+GGG | 0.649922 | 1_2:-63965774 | None:intergenic |
| CAAACAACAACTCGGTCATG+TGG | 0.652383 | 1_2:-63967624 | None:intergenic |
| GGTTGCTTTAGACCATGGCA+AGG | 0.653150 | 1_2:+63967584 | Msa0084480:CDS |
| CAGTGATGCAATTCTCCTTG+GGG | 0.653565 | 1_2:+63966392 | Msa0084480:CDS |
| TGCTATTTATAAGTGTAACA+TGG | 0.661564 | 1_2:+63966017 | Msa0084480:CDS |
| GTTGCCAATGCAGTATTGGA+TGG | 0.678151 | 1_2:+63966120 | Msa0084480:CDS |
| CCGCAGATCAACACAGTTGG+GGG | 0.679161 | 1_2:-63960881 | None:intergenic |
| TATTTATAAGTGTAACATGG+CGG | 0.681522 | 1_2:+63966020 | Msa0084480:CDS |
| ACTCAGGTAATACGCACATG+GGG | 0.722094 | 1_2:+63965189 | Msa0084480:intron |
| AGGAAGCTATTGATTCCATG+TGG | 0.726968 | 1_2:-63966798 | None:intergenic |
| TGGTGAGAAATGTACTGCAG+AGG | 0.726978 | 1_2:-63966818 | None:intergenic |
| TTTCACAATACAGGTCAGCG+AGG | 0.765838 | 1_2:+63964666 | Msa0084480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTACCTTTTTTTTTTT+TGG | + | chr1_2:63960818-63960837 | Msa0084480:five_prime_UTR | 10.0% |
| !! | AATAAATAAATAAATGAAGA+GGG | - | chr1_2:63962049-63962068 | None:intergenic | 10.0% |
| !! | AAATAAATAAATAAATGAAG+AGG | - | chr1_2:63962050-63962069 | None:intergenic | 10.0% |
| !! | AAAATCATATATCTTCAATT+TGG | - | chr1_2:63961227-63961246 | None:intergenic | 15.0% |
| !! | TTACTAATTTCTTAAACAAA+AGG | - | chr1_2:63961335-63961354 | None:intergenic | 15.0% |
| !! | ACAAATATGATCATATATTT+GGG | - | chr1_2:63961437-63961456 | None:intergenic | 15.0% |
| !! | AACAAATATGATCATATATT+TGG | - | chr1_2:63961438-63961457 | None:intergenic | 15.0% |
| !! | TGATTAATATCTTATTATAC+AGG | - | chr1_2:63961584-63961603 | None:intergenic | 15.0% |
| !!! | AATTATCAAAGAATTTTCAA+AGG | - | chr1_2:63961829-63961848 | None:intergenic | 15.0% |
| !! | AAAGTAAATATATATGAGAA+AGG | - | chr1_2:63961874-63961893 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGATGTAAATAAT+TGG | + | chr1_2:63962116-63962135 | Msa0084480:intron | 15.0% |
| !!! | ATATATATAAGTTGAATAAG+AGG | + | chr1_2:63963279-63963298 | Msa0084480:intron | 15.0% |
| !! | AATAACAAAAAAATGGAAAA+AGG | - | chr1_2:63964026-63964045 | None:intergenic | 15.0% |
| !!! | TTTCCATTTTTTTGTTATTA+CGG | + | chr1_2:63964027-63964046 | Msa0084480:intron | 15.0% |
| !! | TAATTCAGTTATAACTTATA+AGG | + | chr1_2:63964362-63964381 | Msa0084480:intron | 15.0% |
| !! | AATTCAGTTATAACTTATAA+GGG | + | chr1_2:63964363-63964382 | Msa0084480:intron | 15.0% |
| !!! | AAAACTGAAAAGTTATTTTT+TGG | + | chr1_2:63964496-63964515 | Msa0084480:intron | 15.0% |
| !! | ACAATTAATATAGAAGAAAA+GGG | - | chr1_2:63965340-63965359 | None:intergenic | 15.0% |
| !! | AACAATTAATATAGAAGAAA+AGG | - | chr1_2:63965341-63965360 | None:intergenic | 15.0% |
| !! | AAAAATACATATGAACAAAA+TGG | - | chr1_2:63965872-63965891 | None:intergenic | 15.0% |
| !!! | TTTGTTCATATGTATTTTTA+TGG | + | chr1_2:63965873-63965892 | Msa0084480:intron | 15.0% |
| !! | AAATTCATACATAAATATTC+AGG | - | chr1_2:63965972-63965991 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTCTTTTATATC+AGG | + | chr1_2:63966369-63966388 | Msa0084480:intron | 15.0% |
| !!! | ATGATTTTATCATTACATTA+TGG | + | chr1_2:63966651-63966670 | Msa0084480:intron | 15.0% |
| !! | TATCATATAAAGATGTTATA+TGG | + | chr1_2:63967393-63967412 | Msa0084480:intron | 15.0% |
| !! | ATCATATAAAGATGTTATAT+GGG | + | chr1_2:63967394-63967413 | Msa0084480:intron | 15.0% |
| !!! | CAAATTTTTTATTGTTTGAT+TGG | + | chr1_2:63967795-63967814 | Msa0084480:three_prime_UTR | 15.0% |
| !! | ACTGAAACCAAAAAAAAAAA+AGG | - | chr1_2:63960828-63960847 | None:intergenic | 20.0% |
| !!! | TTATCAGTAGAAATTGTTTT+AGG | + | chr1_2:63961125-63961144 | Msa0084480:intron | 20.0% |
| !! | ATTAGTAAAGTTACAATAAC+CGG | + | chr1_2:63961347-63961366 | Msa0084480:intron | 20.0% |
| !! | AAGATATTAATCAATGTGTA+CGG | + | chr1_2:63961591-63961610 | Msa0084480:intron | 20.0% |
| !!! | TGTGTTTGATGTTTTTTTTT+TGG | + | chr1_2:63962077-63962096 | Msa0084480:intron | 20.0% |
| !!! | GTGTTTGATGTTTTTTTTTT+GGG | + | chr1_2:63962078-63962097 | Msa0084480:intron | 20.0% |
| !!! | AATAAATTGAAATCAGCTTT+TGG | + | chr1_2:63962495-63962514 | Msa0084480:intron | 20.0% |
| !! | ATGTAAGTAATTTACTCTTT+AGG | + | chr1_2:63962614-63962633 | Msa0084480:intron | 20.0% |
| !! | AACTATTATTCTTTGTGTTA+TGG | + | chr1_2:63962678-63962697 | Msa0084480:intron | 20.0% |
| !!! | GATTTAAGATACTAAAAGAA+AGG | + | chr1_2:63962715-63962734 | Msa0084480:intron | 20.0% |
| !!! | TTCCATTTTTTTGTTATTAC+GGG | + | chr1_2:63964028-63964047 | Msa0084480:intron | 20.0% |
| !!! | AAAGGTGATACTATTTTTAT+CGG | + | chr1_2:63964166-63964185 | Msa0084480:CDS | 20.0% |
| !! | ATATTCGCAGTTAAATTTAT+AGG | + | chr1_2:63964548-63964567 | Msa0084480:intron | 20.0% |
| !! | TTTATCTTGATCTGTAAATA+TGG | + | chr1_2:63964957-63964976 | Msa0084480:intron | 20.0% |
| !!! | TGGAAAATGGATTATTTTTT+TGG | + | chr1_2:63964977-63964996 | Msa0084480:intron | 20.0% |
| !! | AACTATTTACATAATTGATG+AGG | + | chr1_2:63965028-63965047 | Msa0084480:intron | 20.0% |
| !!! | ACATTGTTTATGTTTTCTAA+TGG | - | chr1_2:63965449-63965468 | None:intergenic | 20.0% |
| !!! | TTCTTCTCTAAAATTCATAT+AGG | + | chr1_2:63965675-63965694 | Msa0084480:intron | 20.0% |
| !!! | TCTTCTCTAAAATTCATATA+GGG | + | chr1_2:63965676-63965695 | Msa0084480:intron | 20.0% |
| !! | TATTTATGTATGAATTTGAC+AGG | + | chr1_2:63965975-63965994 | Msa0084480:intron | 20.0% |
| !!! | AATTTTAATTGCGAAAAGTA+TGG | - | chr1_2:63966519-63966538 | None:intergenic | 20.0% |
| !!! | TATTTATTTAGTTCCACATT+CGG | + | chr1_2:63967099-63967118 | Msa0084480:intron | 20.0% |
| !! | AACATTTAATCATTCTTACA+GGG | - | chr1_2:63967372-63967391 | None:intergenic | 20.0% |
| !! | TAACATTTAATCATTCTTAC+AGG | - | chr1_2:63967373-63967392 | None:intergenic | 20.0% |
| !! | TCATATAAAGATGTTATATG+GGG | + | chr1_2:63967395-63967414 | Msa0084480:intron | 20.0% |
| !!! | ATCAAATGAATCAATTTTGA+AGG | + | chr1_2:63967563-63967582 | Msa0084480:CDS | 20.0% |
| !!! | TAAGTTTTAGAGTGATAAAA+TGG | + | chr1_2:63967761-63967780 | Msa0084480:three_prime_UTR | 20.0% |
| !!! | ACTAAAGTTTTGAACTATAA+CGG | + | chr1_2:63967820-63967839 | Msa0084480:three_prime_UTR | 20.0% |
| !!! | AGTGAATAAAACATGATTTT+AGG | - | chr1_2:63967880-63967899 | None:intergenic | 20.0% |
| !! | ATTGTTGTTCCTTAAATGAA+TGG | - | chr1_2:63960657-63960676 | None:intergenic | 25.0% |
| ! | ATTTAAGGAACAACAATCAA+TGG | + | chr1_2:63960660-63960679 | Msa0084480:five_prime_UTR | 25.0% |
| !! | ATAGCCTTAATACCATTTAT+TGG | + | chr1_2:63960700-63960719 | Msa0084480:five_prime_UTR | 25.0% |
| ! | AAGTCCAATAAATGGTATTA+AGG | - | chr1_2:63960707-63960726 | None:intergenic | 25.0% |
| ! | TCAGATAGAGAAATAATCAT+TGG | + | chr1_2:63960991-63961010 | Msa0084480:intron | 25.0% |
| ! | TTTGATATACCTGAATTGAA+TGG | + | chr1_2:63961275-63961294 | Msa0084480:intron | 25.0% |
| !! | AGCTTTGATAGAAAATATAC+AGG | - | chr1_2:63961303-63961322 | None:intergenic | 25.0% |
| ! | TAATATGGACCCAAAAATAA+AGG | - | chr1_2:63961408-63961427 | None:intergenic | 25.0% |
| !!! | TTTATTTTTGGGTCCATATT+AGG | + | chr1_2:63961407-63961426 | Msa0084480:intron | 25.0% |
| !!! | TTATTTTTGGGTCCATATTA+GGG | + | chr1_2:63961408-63961427 | Msa0084480:intron | 25.0% |
| ! | TTGACAACTATAATTCTTCT+TGG | + | chr1_2:63961473-63961492 | Msa0084480:intron | 25.0% |
| !! | TGCTACTTGAAAAAATAAGT+TGG | - | chr1_2:63961550-63961569 | None:intergenic | 25.0% |
| !! | ATATATATGAGAAAGGTGTA+CGG | - | chr1_2:63961867-63961886 | None:intergenic | 25.0% |
| !!! | TTGATGTTTTTTTTTTGGGT+TGG | + | chr1_2:63962082-63962101 | Msa0084480:intron | 25.0% |
| ! | AGAATGACAATGTTTATGTT+TGG | - | chr1_2:63962438-63962457 | None:intergenic | 25.0% |
| ! | CAAAACAAATGTGAAAAACA+AGG | - | chr1_2:63962646-63962665 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTCACATTTGTTT+TGG | + | chr1_2:63962644-63962663 | Msa0084480:intron | 25.0% |
| ! | TGTGTTATGGAAATTAAGTA+TGG | + | chr1_2:63962691-63962710 | Msa0084480:intron | 25.0% |
| !!! | CAAAAAACGAAAGGTTTTAA+TGG | - | chr1_2:63962947-63962966 | None:intergenic | 25.0% |
| !!! | TTTGTTCATAAGTTGATTGT+AGG | + | chr1_2:63962972-63962991 | Msa0084480:intron | 25.0% |
| ! | AAGTTGAATAAGAGGATAAA+TGG | + | chr1_2:63963287-63963306 | Msa0084480:intron | 25.0% |
| ! | TCGCAAGTAACAAAATTTAT+TGG | + | chr1_2:63963344-63963363 | Msa0084480:intron | 25.0% |
| ! | GTAAATAACCTTAGCTAAAA+TGG | + | chr1_2:63963388-63963407 | Msa0084480:intron | 25.0% |
| !! | TTAAATTTTCCAATGTCTCT+TGG | - | chr1_2:63963618-63963637 | None:intergenic | 25.0% |
| ! | AAGAGACATTGGAAAATTTA+AGG | + | chr1_2:63963617-63963636 | Msa0084480:CDS | 25.0% |
| ! | AGAGACATTGGAAAATTTAA+GGG | + | chr1_2:63963618-63963637 | Msa0084480:CDS | 25.0% |
| ! | ACTTGTTTATATGACATACA+TGG | + | chr1_2:63963703-63963722 | Msa0084480:intron | 25.0% |
| ! | GACATACTATTAAATGATTG+TGG | + | chr1_2:63963733-63963752 | Msa0084480:intron | 25.0% |
| !!! | TGATTGTGGTTTTAATACAT+TGG | + | chr1_2:63963747-63963766 | Msa0084480:intron | 25.0% |
| ! | TGCACATATGGAAAATAAAT+TGG | - | chr1_2:63963780-63963799 | None:intergenic | 25.0% |
| ! | TTATTCACAACTTGTAATTC+TGG | - | chr1_2:63963882-63963901 | None:intergenic | 25.0% |
| !! | CTATTACCAGTAAATTTTAG+CGG | + | chr1_2:63963981-63964000 | Msa0084480:CDS | 25.0% |
| ! | ATTTAACTGCGAATATAAGA+AGG | - | chr1_2:63964544-63964563 | None:intergenic | 25.0% |
| ! | TGATCTGTAAATATGGAAAA+TGG | + | chr1_2:63964964-63964983 | Msa0084480:intron | 25.0% |
| ! | TAATATAGAAGAAAAGGGAA+AGG | - | chr1_2:63965335-63965354 | None:intergenic | 25.0% |
| ! | AAATTTGGAGATATATTCAC+GGG | - | chr1_2:63965492-63965511 | None:intergenic | 25.0% |
| ! | CAAATTTGGAGATATATTCA+CGG | - | chr1_2:63965493-63965512 | None:intergenic | 25.0% |
| ! | TTTATGATTGTGCTTAATTG+TGG | + | chr1_2:63965637-63965656 | Msa0084480:intron | 25.0% |
| !!! | TCATATGTATTTTTATGGCA+CGG | + | chr1_2:63965878-63965897 | Msa0084480:intron | 25.0% |
| !! | ACTTATAAATAGCAGCTTTT+TGG | - | chr1_2:63966011-63966030 | None:intergenic | 25.0% |
| !! | TGCTATTTATAAGTGTAACA+TGG | + | chr1_2:63966017-63966036 | Msa0084480:CDS | 25.0% |
| ! | TATTTATAAGTGTAACATGG+CGG | + | chr1_2:63966020-63966039 | Msa0084480:CDS | 25.0% |
| ! | ACAAAAAAGAACTTAGATGA+GGG | - | chr1_2:63966157-63966176 | None:intergenic | 25.0% |
| ! | TCATAACTTATAGATCATAC+TGG | - | chr1_2:63966194-63966213 | None:intergenic | 25.0% |
| ! | AGTATGATCTATAAGTTATG+AGG | + | chr1_2:63966193-63966212 | Msa0084480:intron | 25.0% |
| !!! | TAATTTGTTCAGATATTCTG+TGG | + | chr1_2:63966605-63966624 | Msa0084480:intron | 25.0% |
| !!! | TTCTTTTTTCTGAAACATAC+AGG | + | chr1_2:63966906-63966925 | Msa0084480:intron | 25.0% |
| ! | CATATTTGAATAACTGATAC+AGG | + | chr1_2:63967046-63967065 | Msa0084480:intron | 25.0% |
| !! | CTTGTTCTTTTATGTTATGT+AGG | + | chr1_2:63967191-63967210 | Msa0084480:intron | 25.0% |
| !!! | AGTTAATTTGTCTTCAATTG+AGG | - | chr1_2:63967265-63967284 | None:intergenic | 25.0% |
| ! | ATAAAATGCACTAATTAGAG+TGG | + | chr1_2:63967719-63967738 | Msa0084480:three_prime_UTR | 25.0% |
| CAACAATGTCCATTCATTTA+AGG | + | chr1_2:63960645-63960664 | Msa0084480:five_prime_UTR | 30.0% | |
| ACCATTTATTGGACTTTCTA+AGG | + | chr1_2:63960711-63960730 | Msa0084480:five_prime_UTR | 30.0% | |
| TCCTTAGAAAGTCCAATAAA+TGG | - | chr1_2:63960715-63960734 | None:intergenic | 30.0% | |
| TGGCAGAATATATTGATCTA+TGG | - | chr1_2:63960777-63960796 | None:intergenic | 30.0% | |
| AATATATTCTGCCAAGTTCA+AGG | + | chr1_2:63960783-63960802 | Msa0084480:five_prime_UTR | 30.0% | |
| AGATCTATTGAGGTTGAATT+TGG | + | chr1_2:63961031-63961050 | Msa0084480:intron | 30.0% | |
| ! | TTGATTATGCGTATTTGCTA+TGG | + | chr1_2:63961073-63961092 | Msa0084480:intron | 30.0% |
| CTACTGATAATAGTGAGAAA+AGG | - | chr1_2:63961115-63961134 | None:intergenic | 30.0% | |
| CTGCATATATCTATTGAGTT+TGG | + | chr1_2:63961247-63961266 | Msa0084480:intron | 30.0% | |
| !!! | TATTTTTGGGTCCATATTAG+GGG | + | chr1_2:63961409-63961428 | Msa0084480:intron | 30.0% |
| !! | ATAATTCTTCTTGGTCTTAG+TGG | + | chr1_2:63961482-63961501 | Msa0084480:intron | 30.0% |
| TTAGTGGTAAAAAAGTGAGA+AGG | + | chr1_2:63961498-63961517 | Msa0084480:intron | 30.0% | |
| ACTAACTAACCGTAAATAGA+CGG | - | chr1_2:63961645-63961664 | None:intergenic | 30.0% | |
| ! | TTTACGGTTAGTTAGTCATA+TGG | + | chr1_2:63961649-63961668 | Msa0084480:intron | 30.0% |
| TTCAAAGGTGAATGAATACT+AGG | - | chr1_2:63961814-63961833 | None:intergenic | 30.0% | |
| TTTACTTTCTTCTTCATCAC+TGG | + | chr1_2:63961886-63961905 | Msa0084480:intron | 30.0% | |
| !! | CATCACTGGTTAATTTGTTT+AGG | + | chr1_2:63961900-63961919 | Msa0084480:intron | 30.0% |
| !! | CTGGTTAATTTGTTTAGGTT+TGG | + | chr1_2:63961905-63961924 | Msa0084480:intron | 30.0% |
| TTGTGACTCATTTGTGTTAT+TGG | + | chr1_2:63962163-63962182 | Msa0084480:intron | 30.0% | |
| !!! | AAATGCTAGTGTAGTTTTGT+TGG | + | chr1_2:63962212-63962231 | Msa0084480:intron | 30.0% |
| CCAAATAATAATGCAACAAC+TGG | - | chr1_2:63962525-63962544 | None:intergenic | 30.0% | |
| CCAGTTGTTGCATTATTATT+TGG | + | chr1_2:63962522-63962541 | Msa0084480:intron | 30.0% | |
| GTCTGTTTATGATTAGAGAT+GGG | + | chr1_2:63962587-63962606 | Msa0084480:intron | 30.0% | |
| TCTGTTTATGATTAGAGATG+GGG | + | chr1_2:63962588-63962607 | Msa0084480:intron | 30.0% | |
| ! | CCTATAATTTTTGTCATAGC+TGG | - | chr1_2:63962851-63962870 | None:intergenic | 30.0% |
| CCAGCTATGACAAAAATTAT+AGG | + | chr1_2:63962848-63962867 | Msa0084480:CDS | 30.0% | |
| ACAAAAATTATAGGCACACT+TGG | + | chr1_2:63962857-63962876 | Msa0084480:CDS | 30.0% | |
| CAAAGATCACAAAAAACGAA+AGG | - | chr1_2:63962956-63962975 | None:intergenic | 30.0% | |
| ! | ATAGTATGTTGGAGGATTTT+TGG | + | chr1_2:63963042-63963061 | Msa0084480:intron | 30.0% |
| TGTTTATGTTGTTGCTATGT+TGG | + | chr1_2:63963071-63963090 | Msa0084480:intron | 30.0% | |
| TATAACTTCCCCTTAATGTT+AGG | - | chr1_2:63963122-63963141 | None:intergenic | 30.0% | |
| GAGAAATTTCTACAAAGAGA+CGG | - | chr1_2:63963174-63963193 | None:intergenic | 30.0% | |
| TCTCTGCAATAAATACTCAA+GGG | - | chr1_2:63963260-63963279 | None:intergenic | 30.0% | |
| ATCTCTGCAATAAATACTCA+AGG | - | chr1_2:63963261-63963280 | None:intergenic | 30.0% | |
| AAGAGGATAAATGGTATTAC+AGG | + | chr1_2:63963296-63963315 | Msa0084480:intron | 30.0% | |
| TAACCTTAGCTAAAATGGAA+TGG | + | chr1_2:63963393-63963412 | Msa0084480:intron | 30.0% | |
| TCTTCTGTTATAATCTGGAT+TGG | + | chr1_2:63963484-63963503 | Msa0084480:intron | 30.0% | |
| CTCCCGTAATAACAAAAAAA+TGG | - | chr1_2:63964033-63964052 | None:intergenic | 30.0% | |
| CAAGGCTAATATGAAAGTAA+TGG | - | chr1_2:63964080-63964099 | None:intergenic | 30.0% | |
| GTGAATATCTCCTTTAACTA+AGG | + | chr1_2:63964117-63964136 | Msa0084480:intron | 30.0% | |
| ATCATGGATACCTTAGTTAA+AGG | - | chr1_2:63964130-63964149 | None:intergenic | 30.0% | |
| CAGACATAGTTCAATCTTTA+AGG | + | chr1_2:63964241-63964260 | Msa0084480:intron | 30.0% | |
| TGAATTACTACATTACCCTA+AGG | - | chr1_2:63964349-63964368 | None:intergenic | 30.0% | |
| GCGAATATAAGAAGGAAATT+TGG | - | chr1_2:63964536-63964555 | None:intergenic | 30.0% | |
| !! | TAGGAAGCATTATATGAAAC+AGG | + | chr1_2:63964567-63964586 | Msa0084480:intron | 30.0% |
| ! | TTTTGTACTCTAAGTGTAAG+TGG | + | chr1_2:63964637-63964656 | Msa0084480:intron | 30.0% |
| TTATCCTTATCAGTAAGAGT+AGG | - | chr1_2:63964787-63964806 | None:intergenic | 30.0% | |
| TCTTACTGATAAGGATAAAG+AGG | + | chr1_2:63964789-63964808 | Msa0084480:CDS | 30.0% | |
| TACCATTCATGATTGCAAAA+TGG | - | chr1_2:63965105-63965124 | None:intergenic | 30.0% | |
| TTAGCGAGTAAAATGTCAAA+AGG | - | chr1_2:63965170-63965189 | None:intergenic | 30.0% | |
| AGCAGAAAGTCTATTGTTTA+GGG | - | chr1_2:63965580-63965599 | None:intergenic | 30.0% | |
| AAGCAGAAAGTCTATTGTTT+AGG | - | chr1_2:63965581-63965600 | None:intergenic | 30.0% | |
| ! | TATGAACAAAATGGAAGCAT+AGG | - | chr1_2:63965863-63965882 | None:intergenic | 30.0% |
| !! | CATATGTATTTTTATGGCAC+GGG | + | chr1_2:63965879-63965898 | Msa0084480:intron | 30.0% |
| !! | ATATGTATTTTTATGGCACG+GGG | + | chr1_2:63965880-63965899 | Msa0084480:intron | 30.0% |
| AACATATACTATAGAGACAG+AGG | - | chr1_2:63965939-63965958 | None:intergenic | 30.0% | |
| ATTTATAAGTGTAACATGGC+GGG | + | chr1_2:63966021-63966040 | Msa0084480:CDS | 30.0% | |
| AAAAAAGAACTTAGATGAGG+GGG | - | chr1_2:63966155-63966174 | None:intergenic | 30.0% | |
| CAAAAAAGAACTTAGATGAG+GGG | - | chr1_2:63966156-63966175 | None:intergenic | 30.0% | |
| GACAAAAAAGAACTTAGATG+AGG | - | chr1_2:63966158-63966177 | None:intergenic | 30.0% | |
| ! | TATTTTTCCAACCGTAGAAA+TGG | - | chr1_2:63966451-63966470 | None:intergenic | 30.0% |
| ! | TTAATTGCGAAAAGTATGGT+AGG | - | chr1_2:63966515-63966534 | None:intergenic | 30.0% |
| GTATGACAAGAATACAAAAG+AGG | - | chr1_2:63966585-63966604 | None:intergenic | 30.0% | |
| TAAGAAGACTGTCAAATTTG+TGG | + | chr1_2:63966762-63966781 | Msa0084480:CDS | 30.0% | |
| AAGAAGACTGTCAAATTTGT+GGG | + | chr1_2:63966763-63966782 | Msa0084480:CDS | 30.0% | |
| GCAAGTGAATAGAATAATGT+TGG | - | chr1_2:63966841-63966860 | None:intergenic | 30.0% | |
| TATTCTATTCACTTGCTCAA+AGG | + | chr1_2:63966845-63966864 | Msa0084480:intron | 30.0% | |
| ATTCTATTCACTTGCTCAAA+GGG | + | chr1_2:63966846-63966865 | Msa0084480:intron | 30.0% | |
| ATAAAGATGTTATATGGGGA+AGG | + | chr1_2:63967399-63967418 | Msa0084480:intron | 30.0% | |
| TAAAGATGTTATATGGGGAA+GGG | + | chr1_2:63967400-63967419 | Msa0084480:intron | 30.0% | |
| AACGATATTAAAACCTCCAT+CGG | + | chr1_2:63967432-63967451 | Msa0084480:intron | 30.0% | |
| !!! | ATGTGGTTTTATGATTCCAA+AGG | - | chr1_2:63967610-63967629 | None:intergenic | 30.0% |
| !!! | AGTTTTGAACTATAACGGTA+TGG | + | chr1_2:63967825-63967844 | Msa0084480:three_prime_UTR | 30.0% |
| TAGATCGAACAAGATAGGTT+TGG | - | chr1_2:63960612-63960631 | None:intergenic | 35.0% | |
| ! | GACTTTCTAAGGAACATAAG+AGG | + | chr1_2:63960722-63960741 | Msa0084480:five_prime_UTR | 35.0% |
| TAGAGTCCAACCAAGATATT+AGG | + | chr1_2:63960913-63960932 | Msa0084480:five_prime_UTR | 35.0% | |
| CCATTACCTAATATCTTGGT+TGG | - | chr1_2:63960922-63960941 | None:intergenic | 35.0% | |
| CCAACCAAGATATTAGGTAA+TGG | + | chr1_2:63960919-63960938 | Msa0084480:intron | 35.0% | |
| ACTGCCATTACCTAATATCT+TGG | - | chr1_2:63960926-63960945 | None:intergenic | 35.0% | |
| ATGGCAGTAACTAAAAGAGA+TGG | + | chr1_2:63960938-63960957 | Msa0084480:intron | 35.0% | |
| CTGCATAGATAGATCTATTG+AGG | + | chr1_2:63961021-63961040 | Msa0084480:intron | 35.0% | |
| ACGCATAATCAACATAACGA+GGG | - | chr1_2:63961065-63961084 | None:intergenic | 35.0% | |
| TACGCATAATCAACATAACG+AGG | - | chr1_2:63961066-63961085 | None:intergenic | 35.0% | |
| ATACAGGATCCATTCAATTC+AGG | - | chr1_2:63961287-63961306 | None:intergenic | 35.0% | |
| !!! | ACCCATGGACCTTTATTTTT+GGG | + | chr1_2:63961396-63961415 | Msa0084480:intron | 35.0% |
| ACCCAAAAATAAAGGTCCAT+GGG | - | chr1_2:63961400-63961419 | None:intergenic | 35.0% | |
| CGTAAATAGACGGTAAAAAC+GGG | - | chr1_2:63961635-63961654 | None:intergenic | 35.0% | |
| CCGTAAATAGACGGTAAAAA+CGG | - | chr1_2:63961636-63961655 | None:intergenic | 35.0% | |
| !! | CCGTTTTTACCGTCTATTTA+CGG | + | chr1_2:63961633-63961652 | Msa0084480:intron | 35.0% |
| TAGGGAACACTGTTTCAAAA+AGG | - | chr1_2:63961683-63961702 | None:intergenic | 35.0% | |
| CCAACTATGTCAATCATGTA+GGG | - | chr1_2:63961701-63961720 | None:intergenic | 35.0% | |
| ACCAACTATGTCAATCATGT+AGG | - | chr1_2:63961702-63961721 | None:intergenic | 35.0% | |
| ACATGATTGACATAGTTGGT+TGG | + | chr1_2:63961702-63961721 | Msa0084480:intron | 35.0% | |
| ! | GTTTCCTTTTCAATCACAGT+TGG | + | chr1_2:63961773-63961792 | Msa0084480:intron | 35.0% |
| CAAACCAACTGTGATTGAAA+AGG | - | chr1_2:63961780-63961799 | None:intergenic | 35.0% | |
| ! | CTTTTCAATCACAGTTGGTT+TGG | + | chr1_2:63961778-63961797 | Msa0084480:intron | 35.0% |
| ! | TGTGTTATTGGTGTCTAGTA+TGG | + | chr1_2:63962175-63962194 | Msa0084480:intron | 35.0% |
| ATTCTACACCAGAACCAATT+TGG | + | chr1_2:63962394-63962413 | Msa0084480:intron | 35.0% | |
| !!! | ACTTTTGAAGTGGTCCAAAT+TGG | - | chr1_2:63962411-63962430 | None:intergenic | 35.0% |
| !! | GTTTGGTTTCACTTTTGAAG+TGG | - | chr1_2:63962421-63962440 | None:intergenic | 35.0% |
| CGTCTGTTTATGATTAGAGA+TGG | + | chr1_2:63962586-63962605 | Msa0084480:intron | 35.0% | |
| CTGTTTATGATTAGAGATGG+GGG | + | chr1_2:63962589-63962608 | Msa0084480:intron | 35.0% | |
| TCCAACATACTATCCTTAAC+CGG | - | chr1_2:63963035-63963054 | None:intergenic | 35.0% | |
| TATGTTGTTGCTATGTTGGA+AGG | + | chr1_2:63963075-63963094 | Msa0084480:intron | 35.0% | |
| ! | CCTTAATGTTAGGCTTGTTT+CGG | - | chr1_2:63963112-63963131 | None:intergenic | 35.0% |
| CGAAACAAGCCTAACATTAA+GGG | + | chr1_2:63963110-63963129 | Msa0084480:intron | 35.0% | |
| GAAACAAGCCTAACATTAAG+GGG | + | chr1_2:63963111-63963130 | Msa0084480:intron | 35.0% | |
| AAAGAGACGGTTAAAAAGGA+AGG | - | chr1_2:63963161-63963180 | None:intergenic | 35.0% | |
| CTACAAAGAGACGGTTAAAA+AGG | - | chr1_2:63963165-63963184 | None:intergenic | 35.0% | |
| CTTAGCTAAAATGGAATGGA+GGG | + | chr1_2:63963397-63963416 | Msa0084480:intron | 35.0% | |
| GCTGTTCTTCTGTTATAATC+TGG | + | chr1_2:63963479-63963498 | Msa0084480:intron | 35.0% | |
| ACTAAGACATGCAAATTGCA+AGG | - | chr1_2:63963511-63963530 | None:intergenic | 35.0% | |
| ! | AATTTTCCAATGTCTCTTGG+TGG | - | chr1_2:63963615-63963634 | None:intergenic | 35.0% |
| !! | TCAGAAGGTATTTGCACATA+TGG | - | chr1_2:63963792-63963811 | None:intergenic | 35.0% |
| TATGTGCAAATACCTTCTGA+AGG | + | chr1_2:63963792-63963811 | Msa0084480:intron | 35.0% | |
| ATGTGCAAATACCTTCTGAA+GGG | + | chr1_2:63963793-63963812 | Msa0084480:intron | 35.0% | |
| ! | ATACCTTCTGAAGGGTAATT+AGG | + | chr1_2:63963801-63963820 | Msa0084480:intron | 35.0% |
| ! | TACCTTCTGAAGGGTAATTA+GGG | + | chr1_2:63963802-63963821 | Msa0084480:intron | 35.0% |
| ! | GTGACAATATACGTGCATTT+TGG | + | chr1_2:63963824-63963843 | Msa0084480:intron | 35.0% |
| !!! | GTGCATTTTGGTTCAATTTC+AGG | + | chr1_2:63963836-63963855 | Msa0084480:intron | 35.0% |
| !! | AAATTTTAGCGGCCTTTCAA+AGG | + | chr1_2:63963992-63964011 | Msa0084480:CDS | 35.0% |
| ! | TTGTTATTACGGGAGTTTGT+TGG | + | chr1_2:63964038-63964057 | Msa0084480:intron | 35.0% |
| CATTGTAGTACGCATTATCA+AGG | - | chr1_2:63964098-63964117 | None:intergenic | 35.0% | |
| ATCGGTAAATATCTGTTCAC+AGG | + | chr1_2:63964184-63964203 | Msa0084480:CDS | 35.0% | |
| GAAGTGAAACAACTTCTGTA+TGG | + | chr1_2:63964206-63964225 | Msa0084480:CDS | 35.0% | |
| ! | TACTTTTCTTTGACCTCCTT+AGG | + | chr1_2:63964330-63964349 | Msa0084480:intron | 35.0% |
| ! | ACTTTTCTTTGACCTCCTTA+GGG | + | chr1_2:63964331-63964350 | Msa0084480:intron | 35.0% |
| ATTACTACATTACCCTAAGG+AGG | - | chr1_2:63964346-63964365 | None:intergenic | 35.0% | |
| CTTGTCAAGTAGAAAGACTA+AGG | - | chr1_2:63964461-63964480 | None:intergenic | 35.0% | |
| TGGTATCTGTTTCACAATAC+AGG | + | chr1_2:63964657-63964676 | Msa0084480:intron | 35.0% | |
| TCTTCCTACTCTTACTGATA+AGG | + | chr1_2:63964780-63964799 | Msa0084480:CDS | 35.0% | |
| ! | GACCATTTTGCAATCATGAA+TGG | + | chr1_2:63965100-63965119 | Msa0084480:intron | 35.0% |
| TAGCAGGTATATTCCTTACA+TGG | - | chr1_2:63965272-63965291 | None:intergenic | 35.0% | |
| ! | GTTTATGTTTTCTAATGGCG+AGG | - | chr1_2:63965444-63965463 | None:intergenic | 35.0% |
| CAAAAATATGTGTCTGCTTG+AGG | - | chr1_2:63965520-63965539 | None:intergenic | 35.0% | |
| TGCAAAGATCGAAAATGTAG+AGG | + | chr1_2:63965538-63965557 | Msa0084480:CDS | 35.0% | |
| ATTGTCTCTCGTGGAAATTT+GGG | + | chr1_2:63965742-63965761 | Msa0084480:CDS | 35.0% | |
| AGACAGAGGAATGTTGTAAA+AGG | - | chr1_2:63965925-63965944 | None:intergenic | 35.0% | |
| ATTACCATCCAATACTGCAT+TGG | - | chr1_2:63966127-63966146 | None:intergenic | 35.0% | |
| TACAGGGTATAATCCAGTAA+GGG | - | chr1_2:63966424-63966443 | None:intergenic | 35.0% | |
| !! | TGGTAGGAAGTGTTGTTTAA+AGG | - | chr1_2:63966499-63966518 | None:intergenic | 35.0% |
| ! | TGTCACTTGTTAGTTAACTG+CGG | + | chr1_2:63966553-63966572 | Msa0084480:intron | 35.0% |
| TGAAGACAAATTAACTCCGA+TGG | + | chr1_2:63967269-63967288 | Msa0084480:intron | 35.0% | |
| !! | GAGGTTTTAATATCGTTCCT+TGG | - | chr1_2:63967429-63967448 | None:intergenic | 35.0% |
| ACGATATTAAAACCTCCATC+GGG | + | chr1_2:63967433-63967452 | Msa0084480:intron | 35.0% | |
| ATTTGATCCAGTATTCGACT+CGG | - | chr1_2:63967475-63967494 | None:intergenic | 35.0% | |
| ATTTGATCCAGTATTCGACT+CGG | - | chr1_2:63967475-63967494 | None:intergenic | 35.0% | |
| ACCTATCTTGTTCGATCTAG+TGG | + | chr1_2:63960613-63960632 | Msa0084480:five_prime_UTR | 40.0% | |
| AGGAACAACAATCAATGGTG+TGG | + | chr1_2:63960665-63960684 | Msa0084480:five_prime_UTR | 40.0% | |
| ACAATCAATGGTGTGGAGAA+TGG | + | chr1_2:63960672-63960691 | Msa0084480:five_prime_UTR | 40.0% | |
| AAGATCTTCAGCCTTGAACT+TGG | - | chr1_2:63960797-63960816 | None:intergenic | 40.0% | |
| !! | CAGTCTTGTTAATCAAGCTC+TGG | + | chr1_2:63960844-63960863 | Msa0084480:five_prime_UTR | 40.0% |
| ! | TCTTGTTAATCAAGCTCTGG+TGG | + | chr1_2:63960847-63960866 | Msa0084480:five_prime_UTR | 40.0% |
| TTGGTTGGACTCTATAGATC+TGG | - | chr1_2:63960907-63960926 | None:intergenic | 40.0% | |
| ! | GATGCTGCTATTGCAGTTTT+TGG | + | chr1_2:63960963-63960982 | Msa0084480:intron | 40.0% |
| TTACAATAACCGGTTGTAGC+AGG | + | chr1_2:63961357-63961376 | Msa0084480:intron | 40.0% | |
| CAAAAATAAAGGTCCATGGG+TGG | - | chr1_2:63961397-63961416 | None:intergenic | 40.0% | |
| !!! | CACCCATGGACCTTTATTTT+TGG | + | chr1_2:63961395-63961414 | Msa0084480:intron | 40.0% |
| GACCCAAAAATAAAGGTCCA+TGG | - | chr1_2:63961401-63961420 | None:intergenic | 40.0% | |
| ATATTTGGGAGCCCCTAATA+TGG | - | chr1_2:63961423-63961442 | None:intergenic | 40.0% | |
| CCCTACATGATTGACATAGT+TGG | + | chr1_2:63961698-63961717 | Msa0084480:intron | 40.0% | |
| TAGGTTCCTCAAGAAGCAAA+GGG | - | chr1_2:63961971-63961990 | None:intergenic | 40.0% | |
| ATAGGTTCCTCAAGAAGCAA+AGG | - | chr1_2:63961972-63961991 | None:intergenic | 40.0% | |
| TGCTTCTTGAGGAACCTATT+AGG | + | chr1_2:63961973-63961992 | Msa0084480:CDS | 40.0% | |
| TCTTGAGGAACCTATTAGGA+TGG | + | chr1_2:63961977-63961996 | Msa0084480:CDS | 40.0% | |
| TAAATGAAGAGGGAGAGAGA+AGG | - | chr1_2:63962039-63962058 | None:intergenic | 40.0% | |
| CTTGTCTTCTTGTGTGTGTT+TGG | + | chr1_2:63962274-63962293 | Msa0084480:intron | 40.0% | |
| ACATTTCTGCATCAAGGCAT+CGG | - | chr1_2:63962913-63962932 | None:intergenic | 40.0% | |
| TACCAGACATTTCTGCATCA+AGG | - | chr1_2:63962919-63962938 | None:intergenic | 40.0% | |
| TACTATCCTTAACCGGAAGA+GGG | - | chr1_2:63963028-63963047 | None:intergenic | 40.0% | |
| ATACTATCCTTAACCGGAAG+AGG | - | chr1_2:63963029-63963048 | None:intergenic | 40.0% | |
| TCCGGTTAAGGATAGTATGT+TGG | + | chr1_2:63963031-63963050 | Msa0084480:intron | 40.0% | |
| GGTTAAGGATAGTATGTTGG+AGG | + | chr1_2:63963034-63963053 | Msa0084480:intron | 40.0% | |
| CCGAAACAAGCCTAACATTA+AGG | + | chr1_2:63963109-63963128 | Msa0084480:intron | 40.0% | |
| AGACGGTTAAAAAGGAAGGA+GGG | - | chr1_2:63963157-63963176 | None:intergenic | 40.0% | |
| !!! | CCTCCATTCCATTTTAGCTA+AGG | - | chr1_2:63963399-63963418 | None:intergenic | 40.0% |
| CCTTAGCTAAAATGGAATGG+AGG | + | chr1_2:63963396-63963415 | Msa0084480:intron | 40.0% | |
| ! | AATGTCTCTTGGTGGTATTC+TGG | - | chr1_2:63963607-63963626 | None:intergenic | 40.0% |
| AGAATACCACCAAGAGACAT+TGG | + | chr1_2:63963606-63963625 | Msa0084480:CDS | 40.0% | |
| AAGCACAAAAAAACTCTGCG+CGG | + | chr1_2:63963651-63963670 | Msa0084480:CDS | 40.0% | |
| CAGGTTATGCTAGATACTGT+TGG | + | chr1_2:63963855-63963874 | Msa0084480:intron | 40.0% | |
| TGTCTGCTTCAAGGGTAATT+GGG | - | chr1_2:63963914-63963933 | None:intergenic | 40.0% | |
| AAGTGATGTGTCTGCTTCAA+GGG | - | chr1_2:63963922-63963941 | None:intergenic | 40.0% | |
| CACATCACTTGTCTTAACTC+CGG | + | chr1_2:63963932-63963951 | Msa0084480:CDS | 40.0% | |
| GTAGCTTCTTTGTTCTGATC+CGG | - | chr1_2:63963954-63963973 | None:intergenic | 40.0% | |
| GAAAGGCCGCTAAAATTTAC+TGG | - | chr1_2:63963990-63964009 | None:intergenic | 40.0% | |
| AAGGTAGACTGACCTTTGAA+AGG | - | chr1_2:63964007-63964026 | None:intergenic | 40.0% | |
| ! | TAAGGTATCCATGATCATGC+AGG | + | chr1_2:63964135-63964154 | Msa0084480:intron | 40.0% |
| AACAACTTCTGTATGGCTAG+AGG | + | chr1_2:63964213-63964232 | Msa0084480:CDS | 40.0% | |
| AAAAACGATGCGACACTTTC+TGG | + | chr1_2:63964718-63964737 | Msa0084480:CDS | 40.0% | |
| CATTGATGTAATCAAGCTGC+AGG | - | chr1_2:63964897-63964916 | None:intergenic | 40.0% | |
| ! | GACATTTTACTCGCTAACTC+AGG | + | chr1_2:63965173-63965192 | Msa0084480:intron | 40.0% |
| TAACTCAGGTAATACGCACA+TGG | + | chr1_2:63965187-63965206 | Msa0084480:intron | 40.0% | |
| AACTCAGGTAATACGCACAT+GGG | + | chr1_2:63965188-63965207 | Msa0084480:intron | 40.0% | |
| GAGAGAACATAAAACGTAGC+AGG | - | chr1_2:63965288-63965307 | None:intergenic | 40.0% | |
| ! | TGTGTCCGATTTTCATTTGC+AGG | + | chr1_2:63965466-63965485 | Msa0084480:intron | 40.0% |
| CTGCTTGAGGTCTTCAAATT+TGG | - | chr1_2:63965507-63965526 | None:intergenic | 40.0% | |
| TGTGAACTACAGCATTTGTC+TGG | - | chr1_2:63965613-63965632 | None:intergenic | 40.0% | |
| GAGATATTGAGAGAAGCAGA+TGG | + | chr1_2:63965715-63965734 | Msa0084480:CDS | 40.0% | |
| CATTGTCTCTCGTGGAAATT+TGG | + | chr1_2:63965741-63965760 | Msa0084480:CDS | 40.0% | |
| TTGTCTCTCGTGGAAATTTG+GGG | + | chr1_2:63965743-63965762 | Msa0084480:CDS | 40.0% | |
| AAGTAAATACCGACCTTCTC+AGG | - | chr1_2:63965781-63965800 | None:intergenic | 40.0% | |
| AGAAGGTCGGTATTTACTTC+TGG | + | chr1_2:63965782-63965801 | Msa0084480:intron | 40.0% | |
| ! | CAATACTGCATTGGCAACAT+CGG | - | chr1_2:63966118-63966137 | None:intergenic | 40.0% |
| CTACAGGGTATAATCCAGTA+AGG | - | chr1_2:63966425-63966444 | None:intergenic | 40.0% | |
| CCGTAGAAATGGTTTCTACA+GGG | - | chr1_2:63966440-63966459 | None:intergenic | 40.0% | |
| CCCTGTAGAAACCATTTCTA+CGG | + | chr1_2:63966437-63966456 | Msa0084480:CDS | 40.0% | |
| ACCGTAGAAATGGTTTCTAC+AGG | - | chr1_2:63966441-63966460 | None:intergenic | 40.0% | |
| GTAGAAACCATTTCTACGGT+TGG | + | chr1_2:63966441-63966460 | Msa0084480:CDS | 40.0% | |
| GCAGTTAACTAACAAGTGAC+AGG | - | chr1_2:63966554-63966573 | None:intergenic | 40.0% | |
| ATTATTCTACTGCTGTGTCC+AGG | + | chr1_2:63966708-63966727 | Msa0084480:intron | 40.0% | |
| GATTGTAAACTTTCTCTGCC+TGG | - | chr1_2:63966729-63966748 | None:intergenic | 40.0% | |
| ! | ATTGATTCCATGTGGCTCAT+CGG | - | chr1_2:63966793-63966812 | None:intergenic | 40.0% |
| !! | AGGAAGCTATTGATTCCATG+TGG | - | chr1_2:63966801-63966820 | None:intergenic | 40.0% |
| AACAGATGCCTTAACCTTGA+CGG | - | chr1_2:63966941-63966960 | None:intergenic | 40.0% | |
| ATGACTGTCATATCCGAATG+TGG | - | chr1_2:63967115-63967134 | None:intergenic | 40.0% | |
| CGATATTAAAACCTCCATCG+GGG | + | chr1_2:63967434-63967453 | Msa0084480:intron | 40.0% | |
| ! | GAATTTGCCTTTTTACGTGC+AGG | + | chr1_2:63967524-63967543 | Msa0084480:intron | 40.0% |
| ! | TTGAAGGTTGCTTTAGACCA+TGG | + | chr1_2:63967579-63967598 | Msa0084480:CDS | 40.0% |
| ! | CTTTCTGGCAAACAACAACT+CGG | - | chr1_2:63967635-63967654 | None:intergenic | 40.0% |
| !! | GTTGTTGTTTGCCAGAAAGT+TGG | + | chr1_2:63967636-63967655 | Msa0084480:CDS | 40.0% |
| GCCACTAGATCGAACAAGAT+AGG | - | chr1_2:63960617-63960636 | None:intergenic | 45.0% | |
| ! | TGTTAATCAAGCTCTGGTGG+TGG | + | chr1_2:63960850-63960869 | Msa0084480:five_prime_UTR | 45.0% |
| AGGATGGAAGCCATCCTAAT+AGG | - | chr1_2:63961990-63962009 | None:intergenic | 45.0% | |
| GAGATACTGACAGGTTTGGA+TGG | - | chr1_2:63962017-63962036 | None:intergenic | 45.0% | |
| GAAGGAGATACTGACAGGTT+TGG | - | chr1_2:63962021-63962040 | None:intergenic | 45.0% | |
| AGAGAGAAGGAGATACTGAC+AGG | - | chr1_2:63962026-63962045 | None:intergenic | 45.0% | |
| ! | GAAGTGGTCCAAATTGGTTC+TGG | - | chr1_2:63962405-63962424 | None:intergenic | 45.0% |
| ! | CATTTCTGCATCAAGGCATC+GGG | - | chr1_2:63962912-63962931 | None:intergenic | 45.0% |
| TGCCTTGATGCAGAAATGTC+TGG | + | chr1_2:63962914-63962933 | Msa0084480:CDS | 45.0% | |
| ACTATCCTTAACCGGAAGAG+GGG | - | chr1_2:63963027-63963046 | None:intergenic | 45.0% | |
| GAGACGGTTAAAAAGGAAGG+AGG | - | chr1_2:63963158-63963177 | None:intergenic | 45.0% | |
| ATGGAGGGAGTAACACTTTG+TGG | + | chr1_2:63963412-63963431 | Msa0084480:intron | 45.0% | |
| CGACTAGCATATGGCAAGAA+AGG | - | chr1_2:63963558-63963577 | None:intergenic | 45.0% | |
| CACCCTAATTACCCTTCAGA+AGG | - | chr1_2:63963807-63963826 | None:intergenic | 45.0% | |
| GTGTCTGCTTCAAGGGTAAT+TGG | - | chr1_2:63963915-63963934 | None:intergenic | 45.0% | |
| CAAGTGATGTGTCTGCTTCA+AGG | - | chr1_2:63963923-63963942 | None:intergenic | 45.0% | |
| ATCATGCAGGCTGTGAAGAA+AGG | + | chr1_2:63964148-63964167 | Msa0084480:intron | 45.0% | |
| TTTCACAATACAGGTCAGCG+AGG | + | chr1_2:63964666-63964685 | Msa0084480:intron | 45.0% | |
| ACTCAGGTAATACGCACATG+GGG | + | chr1_2:63965189-63965208 | Msa0084480:intron | 45.0% | |
| ACTTCCTCTCATTGTACACC+CGG | + | chr1_2:63965229-63965248 | Msa0084480:CDS | 45.0% | |
| CTGAAGATGTTCGCCATGTA+AGG | + | chr1_2:63965256-63965275 | Msa0084480:intron | 45.0% | |
| ACGGGCCTGCAAATGAAAAT+CGG | - | chr1_2:63965474-63965493 | None:intergenic | 45.0% | |
| GATGGTATCATTGTCTCTCG+TGG | + | chr1_2:63965733-63965752 | Msa0084480:CDS | 45.0% | |
| AAATACCGACCTTCTCAGGT+GGG | - | chr1_2:63965777-63965796 | None:intergenic | 45.0% | |
| TAAATACCGACCTTCTCAGG+TGG | - | chr1_2:63965778-63965797 | None:intergenic | 45.0% | |
| CGATGTTGCCAATGCAGTAT+TGG | + | chr1_2:63966116-63966135 | Msa0084480:CDS | 45.0% | |
| ! | GTTGCCAATGCAGTATTGGA+TGG | + | chr1_2:63966120-63966139 | Msa0084480:CDS | 45.0% |
| GCAGTGATGCAATTCTCCTT+GGG | + | chr1_2:63966391-63966410 | Msa0084480:CDS | 45.0% | |
| CAGTGATGCAATTCTCCTTG+GGG | + | chr1_2:63966392-63966411 | Msa0084480:CDS | 45.0% | |
| CTAACAAGTGACAGGATCAC+AGG | - | chr1_2:63966546-63966565 | None:intergenic | 45.0% | |
| TGGTGAGAAATGTACTGCAG+AGG | - | chr1_2:63966821-63966840 | None:intergenic | 45.0% | |
| ATCATCTGCTTCACCTCATC+TGG | + | chr1_2:63966961-63966980 | Msa0084480:CDS | 45.0% | |
| ACAGATATCACAGGCATGGT+TGG | - | chr1_2:63967235-63967254 | None:intergenic | 45.0% | |
| GGAATGACGACAGATATCAC+AGG | - | chr1_2:63967244-63967263 | None:intergenic | 45.0% | |
| TAACTCCGATGGACATTCAC+CGG | + | chr1_2:63967280-63967299 | Msa0084480:intron | 45.0% | |
| AGGCAGTCACTTATTGTGAG+AGG | + | chr1_2:63967316-63967335 | Msa0084480:CDS | 45.0% | |
| !! | ATCATTCTTACAGGGTGTCG+AGG | - | chr1_2:63967364-63967383 | None:intergenic | 45.0% |
| TATATGGGGAAGGGTAACCA+AGG | + | chr1_2:63967409-63967428 | Msa0084480:intron | 45.0% | |
| CAAACAACAACTCGGTCATG+TGG | - | chr1_2:63967627-63967646 | None:intergenic | 45.0% | |
| CTGATGAGTCACCAACTTTC+TGG | - | chr1_2:63967650-63967669 | None:intergenic | 45.0% | |
| GGTTGTTGACCTGCTACAAC+CGG | - | chr1_2:63961369-63961388 | None:intergenic | 50.0% | |
| CAACAACCTAAGTCCACCCA+TGG | + | chr1_2:63961381-63961400 | Msa0084480:intron | 50.0% | |
| ! | AAAGGTCCATGGGTGGACTT+AGG | - | chr1_2:63961390-63961409 | None:intergenic | 50.0% |
| GTCAAGCCCTTTGCTTCTTG+AGG | + | chr1_2:63961962-63961981 | Msa0084480:CDS | 50.0% | |
| !! | AGGTTTGGATGGCTCTAGGA+TGG | - | chr1_2:63962006-63962025 | None:intergenic | 50.0% |
| TGACAGGTTTGGATGGCTCT+AGG | - | chr1_2:63962010-63962029 | None:intergenic | 50.0% | |
| ACCTCAATTCTCCCCTCTTC+CGG | + | chr1_2:63963013-63963032 | Msa0084480:intron | 50.0% | |
| ATTCTCCCCTCTTCCGGTTA+AGG | + | chr1_2:63963019-63963038 | Msa0084480:intron | 50.0% | |
| CTTGCCATATGCTAGTCGCA+CGG | + | chr1_2:63963560-63963579 | Msa0084480:intron | 50.0% | |
| CAAACCGTGCGACTAGCATA+TGG | - | chr1_2:63963567-63963586 | None:intergenic | 50.0% | |
| ! | TCGCACGGTTTGACTTCTCA+TGG | + | chr1_2:63963575-63963594 | Msa0084480:CDS | 50.0% |
| ! | CGCACGGTTTGACTTCTCAT+GGG | + | chr1_2:63963576-63963595 | Msa0084480:CDS | 50.0% |
| ! | GCACGGTTTGACTTCTCATG+GGG | + | chr1_2:63963577-63963596 | Msa0084480:CDS | 50.0% |
| CTTCACAGCCTGCATGATCA+TGG | - | chr1_2:63964146-63964165 | None:intergenic | 50.0% | |
| ATACAGGTCAGCGAGGTGAA+TGG | + | chr1_2:63964673-63964692 | Msa0084480:intron | 50.0% | |
| GATAGATCTCCCACCTGAGA+AGG | + | chr1_2:63965765-63965784 | Msa0084480:CDS | 50.0% | |
| ACCACACGTGTGACAACAAC+GGG | - | chr1_2:63966051-63966070 | None:intergenic | 50.0% | |
| GACCACACGTGTGACAACAA+CGG | - | chr1_2:63966052-63966071 | None:intergenic | 50.0% | |
| GGCAGTGATGCAATTCTCCT+TGG | + | chr1_2:63966390-63966409 | Msa0084480:intron | 50.0% | |
| TCTGCTTCACCTCATCTGGA+AGG | + | chr1_2:63966965-63966984 | Msa0084480:CDS | 50.0% | |
| CTGCTTCACCTCATCTGGAA+GGG | + | chr1_2:63966966-63966985 | Msa0084480:CDS | 50.0% | |
| GACGACAGATATCACAGGCA+TGG | - | chr1_2:63967239-63967258 | None:intergenic | 50.0% | |
| AAGTGACTGCCTAGCCTGAA+AGG | - | chr1_2:63967308-63967327 | None:intergenic | 50.0% | |
| ! | GAGAGGTCTTTTCCCTATGC+TGG | + | chr1_2:63967333-63967352 | Msa0084480:CDS | 50.0% |
| ! | AGGTCTTTTCCCTATGCTGG+CGG | + | chr1_2:63967336-63967355 | Msa0084480:CDS | 50.0% |
| ! | GGTTGCTTTAGACCATGGCA+AGG | + | chr1_2:63967584-63967603 | Msa0084480:CDS | 50.0% |
| TTAGACCATGGCAAGGCCTT+TGG | + | chr1_2:63967591-63967610 | Msa0084480:CDS | 50.0% | |
| TGATTCCAAAGGCCTTGCCA+TGG | - | chr1_2:63967599-63967618 | None:intergenic | 50.0% | |
| CCGCAGATCAACACAGTTGG+GGG | - | chr1_2:63960884-63960903 | None:intergenic | 55.0% | |
| ! | CCCCCAACTGTGTTGATCTG+CGG | + | chr1_2:63960881-63960900 | Msa0084480:five_prime_UTR | 55.0% |
| GCCGCAGATCAACACAGTTG+GGG | - | chr1_2:63960885-63960904 | None:intergenic | 55.0% | |
| GGCCGCAGATCAACACAGTT+GGG | - | chr1_2:63960886-63960905 | None:intergenic | 55.0% | |
| TGGCCGCAGATCAACACAGT+TGG | - | chr1_2:63960887-63960906 | None:intergenic | 55.0% | |
| ACCGGAAGAGGGGAGAATTG+AGG | - | chr1_2:63963017-63963036 | None:intergenic | 55.0% | |
| GATCTCCCACCTGAGAAGGT+CGG | + | chr1_2:63965769-63965788 | Msa0084480:intron | 55.0% | |
| TCGGTTGCTTCAGCACGAGT+AGG | - | chr1_2:63966099-63966118 | None:intergenic | 55.0% | |
| TCGAGCAGCCGTCAAGGTTA+AGG | + | chr1_2:63966930-63966949 | Msa0084480:CDS | 55.0% | |
| !! | AGGCACCGGTGAATGTCCAT+CGG | - | chr1_2:63967288-63967307 | None:intergenic | 55.0% |
| GACATTCACCGGTGCCTTTC+AGG | + | chr1_2:63967291-63967310 | Msa0084480:intron | 55.0% | |
| ! | CACAGCATTTTCCCCGATGG+AGG | - | chr1_2:63967448-63967467 | None:intergenic | 55.0% |
| ! | CTGCACAGCATTTTCCCCGA+TGG | - | chr1_2:63967451-63967470 | None:intergenic | 55.0% |
| CATCGGGGAAAATGCTGTGC+AGG | + | chr1_2:63967449-63967468 | Msa0084480:intron | 55.0% | |
| GACTCGGCCTGCACGTAAAA+AGG | - | chr1_2:63967534-63967553 | None:intergenic | 55.0% | |
| CGTGCCGGGTGTACAATGAG+AGG | - | chr1_2:63965236-63965255 | None:intergenic | 60.0% | |
| GCGAACATCTTCAGCGTGCC+GGG | - | chr1_2:63965250-63965269 | None:intergenic | 60.0% | |
| GGCGAACATCTTCAGCGTGC+CGG | - | chr1_2:63965251-63965270 | None:intergenic | 60.0% | |
| GCCCGTTGTTGTCACACGTG+TGG | + | chr1_2:63966047-63966066 | Msa0084480:CDS | 60.0% | |
| CAGTAAGGGTCTCTGCCCCA+AGG | - | chr1_2:63966410-63966429 | None:intergenic | 60.0% | |
| CTTGGGGCAGAGACCCTTAC+TGG | + | chr1_2:63966408-63966427 | Msa0084480:CDS | 60.0% | |
| ACAGGTTCGAGCAGCCGTCA+AGG | + | chr1_2:63966924-63966943 | Msa0084480:intron | 60.0% | |
| CCTTGCAGCCCTTCCAGATG+AGG | - | chr1_2:63966977-63966996 | None:intergenic | 60.0% | |
| CCTCATCTGGAAGGGCTGCA+AGG | + | chr1_2:63966974-63966993 | Msa0084480:CDS | 60.0% | |
| TCACCGGTGCCTTTCAGGCT+AGG | + | chr1_2:63967296-63967315 | Msa0084480:intron | 60.0% | |
| ! | CTGCCTAGCCTGAAAGGCAC+CGG | - | chr1_2:63967302-63967321 | None:intergenic | 60.0% |
| GTCGAGGATCCGCCAGCATA+GGG | - | chr1_2:63967348-63967367 | None:intergenic | 60.0% | |
| TGTCGAGGATCCGCCAGCAT+AGG | - | chr1_2:63967349-63967368 | None:intergenic | 60.0% | |
| GTGCAGGCCGAGTCGAATAC+TGG | + | chr1_2:63967465-63967484 | Msa0084480:intron | 60.0% | |
| GTGCAGGCCGAGTCGAATAC+TGG | + | chr1_2:63967465-63967484 | Msa0084480:intron | 60.0% | |
| GGGAGAGCCGATGAGCCACA+TGG | + | chr1_2:63966783-63966802 | Msa0084480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63960609 | 63967919 | 63960609 | ID=Msa0084480;Name=Msa0084480 |
| chr1_2 | mRNA | 63960609 | 63967919 | 63960609 | ID=Msa0084480-mRNA-1;Parent=Msa0084480;Name=Msa0084480-mRNA-1;_AED=0.17;_eAED=0.17;_QI=350|0.93|0.88|1|0.93|0.88|17|221|503 |
| chr1_2 | exon | 63960609 | 63960934 | 63960609 | ID=Msa0084480-mRNA-1:exon:21444;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63961933 | 63962025 | 63961933 | ID=Msa0084480-mRNA-1:exon:21445;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63962839 | 63962935 | 63962839 | ID=Msa0084480-mRNA-1:exon:21446;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63963575 | 63963672 | 63963575 | ID=Msa0084480-mRNA-1:exon:21447;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63963858 | 63964013 | 63963858 | ID=Msa0084480-mRNA-1:exon:21448;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63964157 | 63964234 | 63964157 | ID=Msa0084480-mRNA-1:exon:21449;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63964679 | 63964810 | 63964679 | ID=Msa0084480-mRNA-1:exon:21450;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63965195 | 63965272 | 63965195 | ID=Msa0084480-mRNA-1:exon:21451;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63965488 | 63965559 | 63965488 | ID=Msa0084480-mRNA-1:exon:21452;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63965697 | 63965786 | 63965697 | ID=Msa0084480-mRNA-1:exon:21453;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63965997 | 63966141 | 63965997 | ID=Msa0084480-mRNA-1:exon:21454;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63966391 | 63966479 | 63966391 | ID=Msa0084480-mRNA-1:exon:21455;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63966730 | 63966825 | 63966730 | ID=Msa0084480-mRNA-1:exon:21456;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63966928 | 63966995 | 63966928 | ID=Msa0084480-mRNA-1:exon:21457;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63967213 | 63967243 | 63967213 | ID=Msa0084480-mRNA-1:exon:21458;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63967313 | 63967372 | 63967313 | ID=Msa0084480-mRNA-1:exon:21459;Parent=Msa0084480-mRNA-1 |
| chr1_2 | exon | 63967546 | 63967919 | 63967546 | ID=Msa0084480-mRNA-1:exon:21460;Parent=Msa0084480-mRNA-1 |
| chr1_2 | five_prime_UTR | 63960609 | 63960934 | 63960609 | ID=Msa0084480-mRNA-1:five_prime_utr;Parent=Msa0084480-mRNA-1 |
| chr1_2 | five_prime_UTR | 63961933 | 63961956 | 63961933 | ID=Msa0084480-mRNA-1:five_prime_utr;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63961957 | 63962025 | 63961957 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63962839 | 63962935 | 63962839 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63963575 | 63963672 | 63963575 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63963858 | 63964013 | 63963858 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63964157 | 63964234 | 63964157 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63964679 | 63964810 | 63964679 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63965195 | 63965272 | 63965195 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63965488 | 63965559 | 63965488 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63965697 | 63965786 | 63965697 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63965997 | 63966141 | 63965997 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63966391 | 63966479 | 63966391 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63966730 | 63966825 | 63966730 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63966928 | 63966995 | 63966928 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63967213 | 63967243 | 63967213 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63967313 | 63967372 | 63967313 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | CDS | 63967546 | 63967698 | 63967546 | ID=Msa0084480-mRNA-1:cds;Parent=Msa0084480-mRNA-1 |
| chr1_2 | three_prime_UTR | 63967699 | 63967919 | 63967699 | ID=Msa0084480-mRNA-1:three_prime_utr;Parent=Msa0084480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
