AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0085170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0085170 MtrunA17_Chr1g0200561 97.101 345 7 3 28 370 8 351 0.0 695
Msa0085170 MtrunA17_Chr8g0372121 48.810 336 127 9 35 367 2 295 9.11e-101 300
Msa0085170 MtrunA17_Chr5g0405211 57.752 258 89 5 35 289 4 244 2.07e-99 298
Msa0085170 MtrunA17_Chr4g0018391 77.564 156 35 0 33 188 1 156 3.00e-89 272
Msa0085170 MtrunA17_Chr4g0056541 75.641 156 38 0 33 188 1 156 1.69e-86 266
Msa0085170 MtrunA17_Chr5g0398971 72.785 158 41 2 33 188 1 158 5.53e-81 251
Msa0085170 MtrunA17_Chr2g0309331 41.667 360 149 9 36 366 7 334 1.20e-76 240
Msa0085170 MtrunA17_Chr8g0346001 66.860 172 42 2 30 188 6 175 8.84e-76 240
Msa0085170 MtrunA17_Chr4g0017921 70.000 150 44 1 39 188 8 156 2.58e-74 234
Msa0085170 MtrunA17_Chr6g0481091 57.237 152 62 2 39 188 6 156 8.22e-59 190
Msa0085170 MtrunA17_Chr2g0309891 57.516 153 61 2 39 188 6 157 1.07e-58 194
Msa0085170 MtrunA17_Chr5g0433781 57.237 152 62 2 39 188 6 156 3.45e-57 197
Msa0085170 MtrunA17_Chr6g0484441 50.932 161 76 1 35 195 1 158 9.24e-57 188
Msa0085170 MtrunA17_Chr3g0109821 55.484 155 65 2 39 190 6 159 1.05e-55 193
Msa0085170 MtrunA17_Chr2g0312321 53.797 158 63 4 35 188 7 158 4.56e-55 183
Msa0085170 MtrunA17_Chr3g0091921 54.194 155 64 3 38 188 15 166 1.93e-54 181
Msa0085170 MtrunA17_Chr4g0060931 50.296 169 77 3 30 194 8 173 7.06e-54 181
Msa0085170 MtrunA17_Chr4g0042561 53.165 158 65 3 37 188 7 161 1.03e-53 178
Msa0085170 MtrunA17_Chr7g0261411 52.903 155 66 4 34 186 5 154 9.46e-53 176
Msa0085170 MtrunA17_Chr1g0147421 48.824 170 81 3 28 194 16 182 3.07e-52 177
Msa0085170 MtrunA17_Chr2g0318081 46.821 173 87 2 39 209 16 185 6.41e-52 176
Msa0085170 MtrunA17_Chr3g0139331 42.233 206 103 3 36 239 8 199 7.52e-52 176
Msa0085170 MtrunA17_Chr5g0417791 51.282 156 67 2 39 188 3 155 1.34e-51 172
Msa0085170 MtrunA17_Chr7g0253011 50.303 165 71 4 39 195 17 178 1.62e-51 176
Msa0085170 MtrunA17_Chr1g0183741 52.229 157 68 4 34 188 5 156 1.72e-51 172
Msa0085170 MtrunA17_Chr7g0214071 50.303 165 74 2 36 198 12 170 3.51e-51 171
Msa0085170 MtrunA17_Chr8g0359921 40.359 223 108 5 39 241 14 231 3.69e-51 173
Msa0085170 MtrunA17_Chr4g0054791 50.920 163 74 3 37 194 4 165 4.52e-51 173
Msa0085170 MtrunA17_Chr6g0453451 51.282 156 69 2 39 190 20 172 1.30e-50 172
Msa0085170 MtrunA17_Chr2g0316971 50.314 159 64 4 39 188 23 175 2.38e-50 173
Msa0085170 MtrunA17_Chr7g0252971 47.273 165 69 3 39 188 8 169 2.67e-50 171
Msa0085170 MtrunA17_Chr5g0400461 50.633 158 67 4 39 188 6 160 4.25e-50 171
Msa0085170 MtrunA17_Chr5g0417001 38.430 242 125 6 27 255 2 232 2.10e-49 171
Msa0085170 MtrunA17_Chr1g0197351 51.250 160 69 3 37 188 40 198 2.54e-49 172
Msa0085170 MtrunA17_Chr3g0130731 49.068 161 73 3 33 188 1 157 7.49e-49 166
Msa0085170 MtrunA17_Chr8g0361731 45.714 175 79 4 27 188 2 173 1.64e-48 168
Msa0085170 MtrunA17_Chr4g0047841 43.367 196 76 5 32 195 3 195 2.02e-48 167
Msa0085170 MtrunA17_Chr7g0217721 41.304 230 105 6 42 249 22 243 2.33e-48 167
Msa0085170 MtrunA17_Chr3g0130101 48.428 159 77 3 41 196 9 165 7.70e-48 166
Msa0085170 MtrunA17_Chr6g0453131 43.750 192 88 6 28 202 2 190 9.53e-48 166
Msa0085170 MtrunA17_Chr2g0318101 45.109 184 82 5 30 198 6 185 1.09e-47 165
Msa0085170 MtrunA17_Chr8g0384721 48.718 156 70 3 39 188 7 158 1.42e-47 163
Msa0085170 MtrunA17_Chr3g0124761 48.447 161 74 3 33 188 1 157 1.97e-47 162
Msa0085170 MtrunA17_Chr6g0461661 48.718 156 71 4 39 188 18 170 3.79e-47 164
Msa0085170 MtrunA17_Chr8g0364791 49.080 163 74 4 41 198 8 166 4.02e-46 163
Msa0085170 MtrunA17_Chr3g0144271 53.061 147 53 4 36 174 20 158 8.88e-46 162
Msa0085170 MtrunA17_Chr3g0128111 49.664 149 72 2 42 188 45 192 1.24e-45 156
Msa0085170 MtrunA17_Chr5g0428991 51.974 152 70 2 39 188 25 175 1.37e-45 165
Msa0085170 MtrunA17_Chr2g0326361 48.408 157 70 3 40 188 15 168 1.99e-45 158
Msa0085170 MtrunA17_Chr7g0263931 46.584 161 75 3 36 188 8 165 3.94e-45 157
Msa0085170 MtrunA17_Chr7g0217711 56.000 125 52 1 42 166 22 143 1.08e-44 152
Msa0085170 MtrunA17_Chr3g0128151 50.658 152 72 2 39 188 22 172 2.49e-44 161
Msa0085170 MtrunA17_Chr1g0201021 47.159 176 79 4 25 196 12 177 3.82e-44 160
Msa0085170 MtrunA17_Chr8g0384201 47.239 163 77 4 41 198 8 166 1.62e-43 157
Msa0085170 MtrunA17_Chr3g0092671 46.835 158 81 3 41 196 7 163 2.89e-43 157
Msa0085170 MtrunA17_Chr4g0076731 44.654 159 84 2 38 195 53 208 1.89e-42 153
Msa0085170 MtrunA17_Chr2g0311651 44.253 174 77 5 33 188 15 186 2.70e-41 147
Msa0085170 MtrunA17_Chr1g0197361 45.912 159 81 4 41 196 10 166 3.40e-41 152
Msa0085170 MtrunA17_Chr4g0038751 45.679 162 79 3 32 190 8 163 3.78e-41 146
Msa0085170 MtrunA17_Chr5g0442771 36.777 242 124 9 36 256 15 248 1.40e-40 145
Msa0085170 MtrunA17_Chr2g0311661 42.775 173 80 4 33 188 15 185 1.15e-39 142
Msa0085170 MtrunA17_Chr8g0385991 47.097 155 68 4 39 184 14 163 4.90e-39 139
Msa0085170 MtrunA17_Chr4g0026141 44.375 160 81 4 35 186 1 160 1.39e-38 138
Msa0085170 MtrunA17_Chr3g0131911 40.462 173 86 3 37 197 12 179 6.70e-36 131
Msa0085170 MtrunA17_Chr2g0321631 43.396 159 75 6 40 186 5 160 6.93e-35 128
Msa0085170 MtrunA17_Chr8g0345671 36.975 238 134 10 39 267 11 241 1.47e-34 131
Msa0085170 MtrunA17_Chr3g0113001 54.717 106 40 3 88 188 14 116 5.83e-33 124
Msa0085170 MtrunA17_Chr4g0050701 39.375 160 76 4 39 188 11 159 2.43e-32 120
Msa0085170 MtrunA17_Chr8g0345691 43.624 149 76 5 39 184 12 155 1.49e-30 120
Msa0085170 MtrunA17_Chr7g0266701 38.509 161 88 4 39 188 4 164 3.02e-30 116
Msa0085170 MtrunA17_Chr2g0321741 45.238 126 62 3 59 184 12 130 3.52e-30 118
Msa0085170 MtrunA17_Chr3g0113031 56.522 92 30 2 105 188 3 92 1.06e-28 112
Msa0085170 MtrunA17_Chr8g0345711 35.714 168 90 5 35 186 8 173 2.41e-28 108
Msa0085170 MtrunA17_Chr8g0345731 40.152 132 73 4 39 165 24 154 5.96e-24 97.1
Msa0085170 MtrunA17_Chr8g0345701 38.667 150 71 6 33 165 1 146 1.06e-23 96.7
Msa0085170 MtrunA17_Chr8g0345721 35.556 180 79 6 28 171 19 197 3.82e-23 95.9
Msa0085170 MtrunA17_Chr7g0243371 50.000 84 40 2 93 174 15 98 1.88e-22 91.3
Msa0085170 MtrunA17_Chr8g0345741 43.697 119 62 4 50 165 2 118 1.37e-21 90.1
Msa0085170 MtrunA17_Chr8g0384351 35.227 176 87 8 33 204 2 154 2.42e-19 84.7
Msa0085170 MtrunA17_Chr3g0130321 28.049 164 93 7 39 187 7 160 8.23e-14 69.7
Msa0085170 MtrunA17_Chr7g0251651 30.061 163 101 6 39 192 18 176 1.42e-13 68.9
Msa0085170 MtrunA17_Chr7g0251661 27.941 136 93 4 31 165 2 133 3.31e-12 63.9
Msa0085170 MtrunA17_Chr7g0251671 26.573 143 100 4 31 172 2 140 4.11e-11 61.2
Msa0085170 MtrunA17_Chr1g0168571 31.333 150 90 7 47 188 13 157 6.58e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0085170 AT1G71930.2 52.632 342 134 8 35 370 5 324 2.23e-114 336
Msa0085170 AT1G71930.1 52.632 342 134 8 35 370 5 324 2.23e-114 336
Msa0085170 AT2G18060.3 55.642 257 98 5 35 289 4 246 1.04e-95 290
Msa0085170 AT2G18060.1 55.642 257 98 5 35 289 4 246 1.04e-95 290
Msa0085170 AT4G36160.1 49.536 323 114 8 32 326 3 304 1.11e-95 290
Msa0085170 AT4G36160.3 49.536 323 114 8 32 326 3 304 1.11e-95 290
Msa0085170 AT4G36160.2 49.536 323 114 8 32 326 7 308 1.24e-95 290
Msa0085170 AT5G66300.1 49.338 302 125 9 34 329 7 286 1.70e-90 274
Msa0085170 AT1G12260.1 45.217 345 130 8 33 326 1 337 2.64e-87 269
Msa0085170 AT1G12260.2 65.761 184 45 2 33 204 1 178 5.28e-86 264
Msa0085170 AT1G62700.1 52.256 266 106 4 33 280 1 263 4.18e-85 263
Msa0085170 AT1G62700.2 52.256 266 106 4 33 280 1 263 4.18e-85 263
Msa0085170 AT5G62380.2 46.557 305 135 6 35 326 1 290 1.26e-81 253
Msa0085170 AT5G62380.1 46.557 305 135 6 35 326 1 290 1.26e-81 253
Msa0085170 AT2G46770.1 66.667 174 43 1 30 188 7 180 5.52e-78 244
Msa0085170 AT1G32770.1 66.864 169 44 1 32 188 9 177 5.82e-75 236
Msa0085170 AT1G33280.1 71.333 150 42 1 39 188 8 156 9.36e-75 234
Msa0085170 AT4G10350.1 68.421 152 46 1 39 188 9 160 1.71e-73 232
Msa0085170 AT3G61910.1 63.953 172 47 2 32 188 4 175 8.14e-73 230
Msa0085170 AT1G79580.3 70.199 151 43 2 39 188 17 166 1.12e-71 228
Msa0085170 AT1G79580.5 70.199 151 43 2 39 188 17 166 1.12e-71 228
Msa0085170 AT1G79580.4 70.199 151 43 2 39 188 17 166 1.12e-71 228
Msa0085170 AT1G79580.2 70.199 151 43 2 39 188 17 166 1.12e-71 228
Msa0085170 AT1G79580.1 70.199 151 43 2 39 188 17 166 1.12e-71 228
Msa0085170 AT3G17730.1 58.553 152 60 2 39 188 6 156 3.79e-60 194
Msa0085170 AT3G18400.1 52.174 161 73 2 35 194 1 158 1.81e-59 195
Msa0085170 AT3G03200.1 55.625 160 67 2 39 195 6 164 1.53e-58 197
Msa0085170 AT1G56010.2 40.702 285 130 8 27 285 8 279 2.81e-57 189
Msa0085170 AT5G17260.1 51.462 171 73 3 39 200 6 175 1.10e-56 192
Msa0085170 AT1G65910.1 54.430 158 69 2 39 194 6 162 3.97e-56 194
Msa0085170 AT2G24430.2 53.846 156 66 3 36 188 13 165 2.20e-55 184
Msa0085170 AT2G24430.1 53.846 156 66 3 36 188 13 165 2.20e-55 184
Msa0085170 AT5G46590.1 55.128 156 65 3 37 188 4 158 1.18e-54 182
Msa0085170 AT1G54330.1 57.895 152 58 3 39 188 6 153 1.42e-54 182
Msa0085170 AT5G07680.1 52.830 159 68 3 34 188 12 167 2.29e-54 182
Msa0085170 AT5G07680.2 53.896 154 64 3 39 188 3 153 2.34e-54 182
Msa0085170 AT4G27410.2 49.693 163 77 2 39 199 14 173 3.57e-54 181
Msa0085170 AT3G12977.1 54.088 159 67 3 35 190 14 169 3.63e-54 180
Msa0085170 AT4G17980.1 53.797 158 66 3 37 188 4 160 1.50e-53 178
Msa0085170 AT5G46590.2 61.069 131 49 2 37 166 4 133 2.29e-53 178
Msa0085170 AT4G17980.2 53.797 158 66 3 37 188 4 160 2.74e-53 178
Msa0085170 AT5G61430.1 51.205 166 70 4 27 188 8 166 4.11e-53 179
Msa0085170 AT5G39610.1 54.545 154 63 3 39 188 20 170 1.01e-52 176
Msa0085170 AT1G69490.1 49.693 163 73 2 36 192 6 165 3.39e-52 174
Msa0085170 AT1G76420.1 54.487 156 65 3 36 188 19 171 7.09e-52 176
Msa0085170 AT3G04070.2 47.368 171 73 3 32 188 3 170 2.99e-51 174
Msa0085170 AT3G04060.1 51.572 159 69 4 39 192 20 175 9.40e-51 173
Msa0085170 AT5G18270.1 51.572 159 69 4 39 192 21 176 1.03e-50 173
Msa0085170 AT4G27410.3 46.893 177 78 4 39 199 14 190 1.10e-50 172
Msa0085170 AT5G18270.2 50.943 159 70 4 39 192 21 176 2.41e-50 172
Msa0085170 AT3G10480.1 51.613 155 71 2 37 188 25 178 2.84e-50 174
Msa0085170 AT3G10490.1 48.447 161 79 2 31 188 19 178 3.65e-50 168
Msa0085170 AT1G33060.1 51.190 168 76 4 33 197 19 183 7.85e-50 177
Msa0085170 AT1G33060.2 51.190 168 76 4 33 197 19 183 8.15e-50 177
Msa0085170 AT5G04410.1 49.693 163 77 3 37 196 7 167 9.04e-50 176
Msa0085170 AT1G52890.1 44.706 170 89 2 39 206 14 180 1.13e-49 169
Msa0085170 AT2G33480.2 50.000 150 69 1 39 188 15 158 1.89e-49 167
Msa0085170 AT3G15500.1 46.296 162 82 2 38 197 13 171 2.04e-49 169
Msa0085170 AT5G53950.1 53.205 156 64 4 39 188 17 169 2.14e-49 171
Msa0085170 AT3G15170.1 49.697 165 74 4 36 194 17 178 2.22e-49 169
Msa0085170 AT3G29035.1 59.375 128 49 1 39 166 24 148 2.79e-49 169
Msa0085170 AT2G33480.1 50.649 154 64 3 39 188 15 160 4.78e-49 166
Msa0085170 AT1G61110.1 46.857 175 74 5 39 198 16 186 5.44e-49 168
Msa0085170 AT3G10490.2 49.682 157 75 2 35 188 23 178 1.08e-48 171
Msa0085170 AT3G10480.2 51.613 155 70 3 37 188 25 177 2.22e-48 169
Msa0085170 AT5G63790.1 48.466 163 73 3 33 188 44 202 2.35e-48 166
Msa0085170 AT5G63790.2 48.466 163 73 3 33 188 54 212 2.46e-48 166
Msa0085170 AT3G10500.1 47.531 162 82 2 37 196 7 167 3.73e-48 171
Msa0085170 AT4G10350.2 68.224 107 32 1 84 188 7 113 6.22e-48 164
Msa0085170 AT4G28530.1 50.000 174 62 6 34 188 5 172 7.33e-48 166
Msa0085170 AT3G04070.1 42.781 187 74 3 32 188 3 186 1.68e-47 165
Msa0085170 AT5G08790.1 47.853 163 74 3 33 188 1 159 6.11e-47 161
Msa0085170 AT1G77450.1 49.351 154 69 3 40 188 11 160 7.37e-47 160
Msa0085170 AT4G35580.1 50.000 160 76 3 32 189 3 160 8.75e-47 167
Msa0085170 AT1G01720.1 46.108 167 80 3 39 199 7 169 9.14e-47 161
Msa0085170 AT4G35580.2 50.000 160 76 3 32 189 3 160 1.51e-46 166
Msa0085170 AT4G35580.3 50.000 160 76 3 32 189 3 160 1.55e-46 166
Msa0085170 AT1G32510.1 46.914 162 75 3 37 188 4 164 1.84e-46 160
Msa0085170 AT2G27300.1 49.007 151 70 3 37 187 12 155 5.83e-46 160
Msa0085170 AT2G43000.1 46.914 162 80 3 41 199 20 178 1.26e-45 158
Msa0085170 AT3G10480.3 42.246 187 73 2 37 188 25 211 1.39e-45 164
Msa0085170 AT5G13180.1 52.258 155 61 5 39 188 14 160 3.21e-45 156
Msa0085170 AT5G39820.1 43.258 178 73 4 36 188 17 191 4.48e-45 158
Msa0085170 AT1G26870.1 44.311 167 77 3 35 188 12 175 5.76e-45 160
Msa0085170 AT5G24590.2 50.617 162 72 4 34 188 4 164 9.13e-45 160
Msa0085170 AT1G34180.3 37.220 223 131 4 29 249 6 221 1.88e-44 159
Msa0085170 AT3G15510.1 47.205 161 67 4 43 188 21 178 2.88e-44 157
Msa0085170 AT3G49530.2 48.125 160 76 4 32 188 9 164 4.80e-44 157
Msa0085170 AT2G02450.1 44.654 159 84 2 38 195 50 205 8.34e-44 156
Msa0085170 AT2G02450.2 44.654 159 84 2 38 195 50 205 8.92e-44 157
Msa0085170 AT1G34180.1 38.389 211 121 4 41 249 18 221 9.52e-44 159
Msa0085170 AT3G49530.1 47.799 159 78 4 33 188 8 164 1.49e-43 157
Msa0085170 AT1G34180.4 36.709 237 125 6 29 249 6 233 2.18e-43 156
Msa0085170 AT5G22290.1 44.025 159 82 3 27 185 10 161 5.54e-43 152
Msa0085170 AT1G34180.2 37.778 225 115 6 41 249 18 233 1.30e-42 156
Msa0085170 AT5G09330.5 40.976 205 111 5 41 239 8 208 2.46e-42 154
Msa0085170 AT5G09330.2 40.976 205 111 5 41 239 8 208 2.46e-42 154
Msa0085170 AT5G09330.4 40.976 205 111 5 41 239 8 208 2.46e-42 154
Msa0085170 AT5G09330.3 40.976 205 111 5 41 239 8 208 2.46e-42 154
Msa0085170 AT5G09330.1 40.976 205 111 5 41 239 8 208 2.46e-42 154
Msa0085170 AT1G34190.1 32.308 390 188 17 41 364 18 397 3.65e-42 155
Msa0085170 AT5G64060.1 45.752 153 78 3 39 188 6 156 6.58e-42 150
Msa0085170 AT1G56010.1 39.437 213 97 4 97 285 8 212 3.91e-41 145
Msa0085170 AT3G44290.2 48.000 125 63 1 41 165 16 138 7.11e-41 144
Msa0085170 AT1G52880.1 46.250 160 69 4 43 188 21 177 5.67e-40 144
Msa0085170 AT3G44290.1 48.000 125 63 1 41 165 16 138 1.03e-39 144
Msa0085170 AT3G12910.1 41.270 189 86 6 26 194 8 191 3.96e-39 141
Msa0085170 AT2G17040.1 42.384 151 78 3 41 188 8 152 2.63e-38 139
Msa0085170 AT2G18060.2 43.275 171 82 4 120 289 2 158 7.06e-38 137
Msa0085170 AT5G04395.1 45.098 153 71 3 36 175 25 177 7.35e-38 135
Msa0085170 AT3G12977.2 61.856 97 34 2 97 190 20 116 5.25e-37 134
Msa0085170 AT1G32870.3 39.474 190 103 5 12 196 22 204 2.29e-35 136
Msa0085170 AT1G32870.2 42.593 162 86 3 39 196 10 168 9.31e-35 134
Msa0085170 AT1G32870.1 42.593 162 86 3 39 196 10 168 1.10e-34 134
Msa0085170 AT5G61430.2 57.143 98 38 2 95 188 6 103 2.09e-34 128
Msa0085170 AT2G33480.3 52.041 98 41 2 95 188 8 103 5.77e-30 114
Msa0085170 AT5G22380.1 43.478 138 68 4 35 165 1 135 9.69e-28 109
Msa0085170 AT3G44350.1 41.221 131 68 4 42 166 8 135 5.91e-27 105
Msa0085170 AT3G44350.2 36.646 161 90 5 42 193 8 165 6.75e-27 107
Msa0085170 AT4G28530.2 48.276 116 39 3 34 132 5 116 1.38e-26 108
Msa0085170 AT1G02230.1 41.447 152 76 8 40 185 4 148 1.38e-23 100
Msa0085170 AT5G64530.1 33.929 168 78 6 39 188 3 155 2.17e-23 96.3
Msa0085170 AT5G64530.2 39.535 129 61 5 39 165 3 116 3.74e-23 94.7
Msa0085170 AT4G01520.1 35.542 166 95 6 40 199 5 164 9.78e-23 97.4
Msa0085170 AT4G01550.1 34.921 189 111 8 42 225 7 188 2.14e-22 98.6
Msa0085170 AT4G01540.3 35.976 164 93 7 42 199 7 164 1.23e-21 95.9
Msa0085170 AT4G01540.4 36.145 166 86 7 42 192 7 167 1.46e-21 95.5
Msa0085170 AT4G01540.1 34.756 164 95 6 42 199 7 164 2.09e-21 95.9
Msa0085170 AT4G01540.2 36.145 166 86 7 42 192 7 167 2.33e-21 95.1
Msa0085170 AT3G04420.2 39.695 131 70 4 40 165 4 130 2.72e-21 93.2
Msa0085170 AT1G02250.1 37.500 152 82 6 40 185 4 148 2.87e-21 94.4
Msa0085170 AT3G04420.1 39.695 131 70 4 40 165 4 130 7.91e-21 92.8
Msa0085170 AT2G43000.2 44.444 99 52 2 104 199 2 100 7.81e-20 87.0
Msa0085170 AT3G10490.4 48.052 77 37 1 115 188 2 78 1.93e-19 89.0
Msa0085170 AT3G10490.3 48.052 77 37 1 115 188 2 78 1.93e-19 89.0
Msa0085170 AT1G01010.1 35.065 154 82 7 42 184 6 152 2.11e-19 89.4
Msa0085170 AT1G02220.1 37.879 132 70 5 39 165 3 127 8.00e-18 84.7
Msa0085170 AT5G50820.1 34.559 136 74 5 39 170 17 141 1.54e-16 77.8
Msa0085170 AT3G56530.1 27.273 154 108 2 38 189 51 202 1.61e-16 80.1
Msa0085170 AT5G22290.2 49.231 65 29 1 121 185 2 62 4.02e-15 74.7
Msa0085170 AT5G14000.2 30.233 129 83 2 39 165 15 138 4.47e-14 69.7
Msa0085170 AT5G14000.1 30.233 129 83 2 39 165 15 138 2.94e-13 68.6
Msa0085170 AT3G55210.1 25.000 164 106 5 39 189 11 170 4.36e-13 69.3
Msa0085170 AT3G04430.1 35.075 134 70 6 45 165 6 135 2.46e-11 62.8

Find 73 sgRNAs with CRISPR-Local

Find 592 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCCACTGCTGCTGGATTT+TGG 0.210425 1_2:+65138764 Msa0085170:CDS
TGTCCATAACAAGAGTATTT+TGG 0.256590 1_2:-65139748 None:intergenic
AATCAAGCTAATCATATCTT+AGG 0.304585 1_2:+65140043 Msa0085170:CDS
TTCATTGCAAAACTTGTTGT+TGG 0.320035 1_2:-65139806 None:intergenic
TAGGATATTTCTTATCTTTG+TGG 0.324009 1_2:-65138723 None:intergenic
AACTGTTGATCGTTGCTAAA+GGG 0.357374 1_2:-65139716 None:intergenic
GAGATCATCATCAATGGATA+TGG 0.360587 1_2:+65138338 Msa0085170:CDS
AAACCAAAATACTCTTGTTA+TGG 0.379475 1_2:+65139745 Msa0085170:CDS
TCCACCAGAGTGGTCTTAAT+AGG 0.399037 1_2:-65128463 None:intergenic
AAAATATCTGTAATTGATAA+AGG 0.402136 1_2:-65139635 None:intergenic
CTATTAGTTCTTGTTCCTGT+AGG 0.412771 1_2:-65138742 None:intergenic
TTGTAGGGTATTACCTCAAC+AGG 0.423700 1_2:+65138409 Msa0085170:CDS
CACTGGATCCTGGTGCCGTC+AGG 0.426246 1_2:+65128490 Msa0085170:CDS
ACAATGGACAAGTAATTGAT+TGG 0.431733 1_2:+65139900 Msa0085170:CDS
TCACACTCAAGTTATGAATC+AGG 0.440798 1_2:-65140073 None:intergenic
ACTAATAGAGCCACTGCTGC+TGG 0.441800 1_2:+65138757 Msa0085170:CDS
AAGAAGGATGGGTTGTGTGC+AGG 0.445621 1_2:+65139501 Msa0085170:CDS
AAAAGCCAAGTCCAAGTCAT+AGG 0.450680 1_2:+65139531 Msa0085170:CDS
AGTAATTGATTGGAAAAGCT+TGG 0.452396 1_2:+65139910 Msa0085170:CDS
CCAACAGAAGAAGAACTTGT+AGG 0.454094 1_2:+65138393 Msa0085170:CDS
CCTACAAGTTCTTCTTCTGT+TGG 0.464154 1_2:-65138393 None:intergenic
AAGAATATTGCAGTGAAGAA+AGG 0.471622 1_2:+65139861 Msa0085170:CDS
ATGGAATCATGTGTGCCTCC+AGG 0.473484 1_2:+65138357 Msa0085170:CDS
AGGAAGTCAAATGGAGTTGA+AGG 0.474931 1_2:+65128421 None:intergenic
TCATAACCTGGCCTATGACT+TGG 0.481317 1_2:-65139542 None:intergenic
TCAGGAGAGATCATCATCAA+TGG 0.483391 1_2:+65138332 Msa0085170:intron
AAACTGTTGATCGTTGCTAA+AGG 0.487951 1_2:-65139717 None:intergenic
TATTAATTACTGCAGGAAGA+AGG 0.489259 1_2:+65139485 Msa0085170:intron
CAAATGGAAGGAAAACTGAT+TGG 0.489271 1_2:+65138875 Msa0085170:CDS
TACAAGGGACGTGCCCCAAA+TGG 0.490347 1_2:+65138859 Msa0085170:CDS
AGAAGGATGGGTTGTGTGCA+GGG 0.492807 1_2:+65139502 Msa0085170:CDS
CTATACCATGGTTCATAACC+TGG 0.495957 1_2:-65139554 None:intergenic
ATTGAACCATGGGACATTCA+AGG 0.504836 1_2:+65138489 Msa0085170:CDS
AAACTTGTACCTTCAGCTGC+AGG 0.517860 1_2:-65139686 None:intergenic
AATGCAGATAGATGCAAGCT+AGG 0.521793 1_2:+65138667 Msa0085170:intron
AATGGTGACCTGACGGCACC+AGG 0.523681 1_2:-65128498 None:intergenic
CCTGGCCTATGACTTGGACT+TGG 0.526558 1_2:-65139536 None:intergenic
CAACAGAAGAAGAACTTGTA+GGG 0.533130 1_2:+65138394 Msa0085170:CDS
CCACTCTGGTGGAATATCAC+TGG 0.533744 1_2:+65128473 Msa0085170:CDS
GTGAGTTAATCTTCCTGTTG+AGG 0.533745 1_2:-65138422 None:intergenic
GGTGGAATATCACTGGATCC+TGG 0.534395 1_2:+65128480 Msa0085170:CDS
TGTAGCTCATGTTGACTATG+AGG 0.535154 1_2:-65140010 None:intergenic
TGGAATCATGTGTGCCTCCA+GGG 0.537156 1_2:+65138358 Msa0085170:CDS
TGACTATGAGGTATCATCAA+TGG 0.537374 1_2:-65139998 None:intergenic
AATTACTGCAGGAAGAAGGA+TGG 0.543175 1_2:+65139489 Msa0085170:intron
AAAGATAAGAAATATCCTAC+AGG 0.562663 1_2:+65138727 Msa0085170:CDS
ATTACTGCAGGAAGAAGGAT+GGG 0.564101 1_2:+65139490 Msa0085170:intron
CTAAAATAACTTGCCTGTGG+AGG 0.564331 1_2:-65138937 None:intergenic
TTCTGAACATGGTCCTCCAC+AGG 0.565416 1_2:+65138924 Msa0085170:CDS
CTTCAAAATCCTGCAGCTGA+AGG 0.566846 1_2:+65139677 Msa0085170:CDS
AAAACAGAATAATAGGAATG+AGG 0.568492 1_2:+65138821 Msa0085170:CDS
AGTCAAATGGAGTTGAAGGC+AGG 0.569793 1_2:+65128425 None:intergenic
CCAAGTCCAAGTCATAGGCC+AGG 0.570685 1_2:+65139536 Msa0085170:CDS
ATCTCTACAAAATTGAACCA+TGG 0.574175 1_2:+65138478 Msa0085170:CDS
TCTCTACAAAATTGAACCAT+GGG 0.577975 1_2:+65138479 Msa0085170:CDS
AGCATTAATAATAATAACAA+TGG 0.580251 1_2:+65139884 Msa0085170:CDS
TCCTATTAAGACCACTCTGG+TGG 0.581062 1_2:+65128462 Msa0085170:CDS
TGATCTAGATGTTATTGTTG+AGG 0.597687 1_2:+65138452 Msa0085170:CDS
ACTGTTGATCGTTGCTAAAG+GGG 0.600050 1_2:-65139715 None:intergenic
AGGGACGTGCCCCAAATGGA+AGG 0.600104 1_2:+65138863 Msa0085170:CDS
TTTCCAAAATCCAGCAGCAG+TGG 0.602768 1_2:-65138767 None:intergenic
GTTGGATGAAATCTAAACCC+TGG 0.604289 1_2:-65138375 None:intergenic
AATGTACCTTGAATGTCCCA+TGG 0.604436 1_2:-65138495 None:intergenic
TGTTGTTGATTACTATACCA+TGG 0.613974 1_2:-65139566 None:intergenic
AAAGAAAGTACTCATCACAA+TGG 0.639408 1_2:+65139827 Msa0085170:CDS
AGTTCCTATTAAGACCACTC+TGG 0.639681 1_2:+65128459 Msa0085170:CDS
GATATGAGCAACAGAATGAG+TGG 0.640331 1_2:+65138689 Msa0085170:CDS
AGACATCAAACTTCTGAACA+TGG 0.653088 1_2:+65138913 Msa0085170:CDS
ATAGGCCAGGTTATGAACCA+TGG 0.676021 1_2:+65139549 Msa0085170:CDS
GTTGTTGGACTATCTAACTG+TGG 0.709960 1_2:-65139791 None:intergenic
GGATGAAATCTAAACCCTGG+AGG 0.711561 1_2:-65138372 None:intergenic
CCAGTGATATTCCACCAGAG+TGG 0.734297 1_2:-65128473 None:intergenic
TCATCTGATCTGAAATACTG+TGG 0.737110 1_2:-65139590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAGACTTTTTTTTTTA+AGG - chr1_2:65130508-65130527 None:intergenic 10.0%
!!! AAAAAAAAGTCTTATAATTA+AGG + chr1_2:65130511-65130530 Msa0085170:intron 10.0%
!! ATATTATTATTGTTATGTAT+AGG - chr1_2:65132401-65132420 None:intergenic 10.0%
!!! ACATAATCTATTTTATTATA+TGG - chr1_2:65133282-65133301 None:intergenic 10.0%
!! ATAACTAATATATATCTTAT+GGG - chr1_2:65133338-65133357 None:intergenic 10.0%
!! TATAACTAATATATATCTTA+TGG - chr1_2:65133339-65133358 None:intergenic 10.0%
!!! AATAATGAATTTGTTTTTAA+TGG + chr1_2:65135747-65135766 Msa0085170:intron 10.0%
!! TTATATATGTTAAAAAACTT+AGG + chr1_2:65136547-65136566 Msa0085170:intron 10.0%
!! TATATATGTTAAAAAACTTA+GGG + chr1_2:65136548-65136567 Msa0085170:intron 10.0%
!! AAAATGATTTATTTATCAAA+TGG - chr1_2:65137112-65137131 None:intergenic 10.0%
!!! ATTTGATAAATAAATCATTT+TGG + chr1_2:65137111-65137130 Msa0085170:intron 10.0%
!!! TAATTTACATATTTCTTTTT+TGG - chr1_2:65138246-65138265 None:intergenic 10.0%
!! AAAATAAAATTAGAATAGAA+AGG - chr1_2:65139051-65139070 None:intergenic 10.0%
!!! TTTATTTTATCTTTTGTTAT+AGG + chr1_2:65139332-65139351 Msa0085170:intron 10.0%
!! ATTATACTGAATAAAAACAA+AGG + chr1_2:65128905-65128924 Msa0085170:intron 15.0%
!! AAAAATAAAATCAAGAATCT+AGG - chr1_2:65129057-65129076 None:intergenic 15.0%
!!! AATCACTTTATTTATCTTTT+TGG - chr1_2:65129213-65129232 None:intergenic 15.0%
!!! TATTTTAATGCTGTAATTAT+TGG - chr1_2:65129897-65129916 None:intergenic 15.0%
!!! TATTTTTCTTCTTCTTAATT+TGG + chr1_2:65130045-65130064 Msa0085170:intron 15.0%
!! TTATAGTAAAAAGTAGTAAA+AGG + chr1_2:65130127-65130146 Msa0085170:intron 15.0%
!!! TTTTTAAAAAATCTTATTGG+AGG + chr1_2:65130811-65130830 Msa0085170:intron 15.0%
!! AATAAAATATAACAAAAGCA+TGG - chr1_2:65130840-65130859 None:intergenic 15.0%
!!! TTCATTTTAAGTTACAAAAT+AGG - chr1_2:65131020-65131039 None:intergenic 15.0%
!! AGATACATCATTAAAAATAT+AGG + chr1_2:65131148-65131167 Msa0085170:intron 15.0%
!!! TAGTTTGTCATATTAATATT+AGG - chr1_2:65131366-65131385 None:intergenic 15.0%
!!! AATATCAAAATAGAGTTTTT+TGG - chr1_2:65131692-65131711 None:intergenic 15.0%
!!! TGATTTTTTCTTAAAACTTT+AGG - chr1_2:65131773-65131792 None:intergenic 15.0%
!!! CTATAATATAATTCTTTTAG+CGG - chr1_2:65132592-65132611 None:intergenic 15.0%
!!! ATATCACAATAAACATTTTT+TGG - chr1_2:65132700-65132719 None:intergenic 15.0%
!!! AAAATATTTATTTTCACTAG+AGG + chr1_2:65132725-65132744 Msa0085170:intron 15.0%
!!! ATTGATTGTTTTATTATAGT+GGG - chr1_2:65133034-65133053 None:intergenic 15.0%
!!! AATTGATTGTTTTATTATAG+TGG - chr1_2:65133035-65133054 None:intergenic 15.0%
!! TATTGTGGTTAATTATATAA+TGG + chr1_2:65133121-65133140 Msa0085170:intron 15.0%
!! TTATTATATGGTTATGATTA+TGG - chr1_2:65133270-65133289 None:intergenic 15.0%
!! TTATGTAAACTTATATAAGA+AGG + chr1_2:65133296-65133315 Msa0085170:intron 15.0%
!!! TACTTTTTAGTTTTTTGAAT+AGG + chr1_2:65133490-65133509 Msa0085170:intron 15.0%
!! TTGTTGAACATATATTTATT+TGG + chr1_2:65133521-65133540 Msa0085170:intron 15.0%
!! TGTTGAACATATATTTATTT+GGG + chr1_2:65133522-65133541 Msa0085170:intron 15.0%
!!! TTTTTTATTTATCAGTCTAA+TGG - chr1_2:65133596-65133615 None:intergenic 15.0%
!!! TGTATATAATATGGTTATTT+TGG + chr1_2:65134154-65134173 Msa0085170:intron 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr1_2:65134295-65134314 None:intergenic 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG - chr1_2:65134335-65134354 None:intergenic 15.0%
!! AAATAGAATGAAATAATCAT+TGG - chr1_2:65134460-65134479 None:intergenic 15.0%
!! TTAGATATATAAATACACAT+AGG - chr1_2:65134763-65134782 None:intergenic 15.0%
!!! GAAAAGTTTAACATTTTTTT+TGG - chr1_2:65135318-65135337 None:intergenic 15.0%
!! TTTGATATTATATTATTCGA+TGG + chr1_2:65135433-65135452 Msa0085170:intron 15.0%
!! AAATTAAACAACTTCAATAT+CGG + chr1_2:65136036-65136055 Msa0085170:intron 15.0%
!! ATTAATTATTATCTTGTGTT+TGG - chr1_2:65136192-65136211 None:intergenic 15.0%
!!! ATATATATTTAAGTTGTTGA+TGG - chr1_2:65136689-65136708 None:intergenic 15.0%
!! AAGGATATATATACTATATA+TGG - chr1_2:65136989-65137008 None:intergenic 15.0%
!!! CTTAGTTTTCTAAATAAAAA+TGG + chr1_2:65137251-65137270 Msa0085170:intron 15.0%
!!! CAATTTTAACATATATGTTT+TGG - chr1_2:65138274-65138293 None:intergenic 15.0%
!! AAAATATCTGTAATTGATAA+AGG - chr1_2:65139638-65139657 None:intergenic 15.0%
!! AGCATTAATAATAATAACAA+TGG + chr1_2:65139884-65139903 Msa0085170:CDS 15.0%
!! ATTATAACTTCCATTCAAAT+AGG - chr1_2:65128662-65128681 None:intergenic 20.0%
!! ATAATGTAACAACAGAAAAA+GGG - chr1_2:65128890-65128909 None:intergenic 20.0%
!! TATAATGTAACAACAGAAAA+AGG - chr1_2:65128891-65128910 None:intergenic 20.0%
!!! TTATTTTAGCATGCAATATA+AGG - chr1_2:65128967-65128986 None:intergenic 20.0%
!! ATTGCATGCTAAAATAATAA+TGG + chr1_2:65128970-65128989 Msa0085170:intron 20.0%
!!! TATTTTGCAAAACCATTATT+AGG - chr1_2:65129166-65129185 None:intergenic 20.0%
!! ATTCCCAAAATTACAAAAAA+TGG + chr1_2:65129230-65129249 Msa0085170:intron 20.0%
!!! TGTCTATAAAAGTATAATAC+AGG - chr1_2:65129257-65129276 None:intergenic 20.0%
!! AATTTAATCAATCTTTGCAT+TGG + chr1_2:65129377-65129396 Msa0085170:intron 20.0%
!! CTGTAAATATTAAACTCAAT+TGG + chr1_2:65129639-65129658 Msa0085170:intron 20.0%
!!! ACAAGTGTCATTATTATTAT+GGG - chr1_2:65129672-65129691 None:intergenic 20.0%
!!! AACAAGTGTCATTATTATTA+TGG - chr1_2:65129673-65129692 None:intergenic 20.0%
!! TACCATTAAATACTGATAAT+TGG + chr1_2:65129738-65129757 Msa0085170:intron 20.0%
!! AACCAATTATCAGTATTTAA+TGG - chr1_2:65129743-65129762 None:intergenic 20.0%
!! TGTCTTTAATTATTTCAGAT+AGG - chr1_2:65129775-65129794 None:intergenic 20.0%
!! TATCATTCATAATGTAAAGT+CGG + chr1_2:65129915-65129934 Msa0085170:intron 20.0%
!!! TTGTGATGATTTTATTAGAT+TGG + chr1_2:65129952-65129971 Msa0085170:intron 20.0%
!! ATCAAAGATAAAAGAAAAGT+GGG - chr1_2:65130021-65130040 None:intergenic 20.0%
!! AATCAAAGATAAAAGAAAAG+TGG - chr1_2:65130022-65130041 None:intergenic 20.0%
!!! CTTTTCTTTTATCTTTGATT+AGG + chr1_2:65130022-65130041 Msa0085170:intron 20.0%
!!! ACAACATTGAATTTTTTCAA+CGG - chr1_2:65130215-65130234 None:intergenic 20.0%
!!! GAACTTATAGAGTTATTTTA+TGG + chr1_2:65130328-65130347 Msa0085170:intron 20.0%
!! TTTCAAAAAAGTCATTCATT+TGG - chr1_2:65130456-65130475 None:intergenic 20.0%
!! ATTGAAGATTCATATTATCA+AGG + chr1_2:65130708-65130727 Msa0085170:intron 20.0%
!!! ATTCATATTATCAAGGTTTT+TGG + chr1_2:65130715-65130734 Msa0085170:intron 20.0%
!! TACATCATTAAAAATATAGG+AGG + chr1_2:65131151-65131170 Msa0085170:intron 20.0%
!! ACATCATTAAAAATATAGGA+GGG + chr1_2:65131152-65131171 Msa0085170:intron 20.0%
!! TAATATGACAAACTACTATA+TGG + chr1_2:65131371-65131390 Msa0085170:intron 20.0%
!! GTTAGAAATAGGAATTAATT+GGG + chr1_2:65131922-65131941 Msa0085170:intron 20.0%
!! TATTGAATTCATGATTGTTT+AGG - chr1_2:65131984-65132003 None:intergenic 20.0%
!! TCATCTTCTTAAAATAAACA+AGG + chr1_2:65132017-65132036 Msa0085170:intron 20.0%
!! CATCTTCTTAAAATAAACAA+GGG + chr1_2:65132018-65132037 Msa0085170:intron 20.0%
!! ATCTTCTTAAAATAAACAAG+GGG + chr1_2:65132019-65132038 Msa0085170:intron 20.0%
!!! CTCATGTATATTTTATTTTG+TGG - chr1_2:65132208-65132227 None:intergenic 20.0%
!! AATCATAGGTTAAATGAATA+TGG - chr1_2:65132257-65132276 None:intergenic 20.0%
!! ATTATTTATGCACCAATAAA+AGG - chr1_2:65132308-65132327 None:intergenic 20.0%
!! TTACTAAATGATGAATCATT+TGG - chr1_2:65132878-65132897 None:intergenic 20.0%
!! TATTAACCATTTCAATTGTT+TGG + chr1_2:65132902-65132921 Msa0085170:intron 20.0%
!!! TTGATTGTTTTATTATAGTG+GGG - chr1_2:65133033-65133052 None:intergenic 20.0%
!! GTAAATGTAATATATATGTG+AGG - chr1_2:65133369-65133388 None:intergenic 20.0%
!! TTATAAAACTAACTTAGTAC+TGG - chr1_2:65133843-65133862 None:intergenic 20.0%
!!! TATATTGGTTTAAGTGAAAT+CGG + chr1_2:65133910-65133929 Msa0085170:intron 20.0%
!!! TTTCTTTTTCTTGTAAAGTA+AGG + chr1_2:65134411-65134430 Msa0085170:intron 20.0%
!!! TTCTTTTTCTTGTAAAGTAA+GGG + chr1_2:65134412-65134431 Msa0085170:intron 20.0%
!! TAATCTAACATATCTAATCT+AGG + chr1_2:65134698-65134717 Msa0085170:intron 20.0%
!! ATATTATACTTGGATCAAAA+AGG - chr1_2:65134840-65134859 None:intergenic 20.0%
!!! TGTTAAACTTTTCTGAAAAT+TGG + chr1_2:65135325-65135344 Msa0085170:intron 20.0%
!!! TTCTGAAAATTGGTTTTATT+AGG + chr1_2:65135335-65135354 Msa0085170:intron 20.0%
!! TTAATGTAATGTCGTAATTA+AGG - chr1_2:65135405-65135424 None:intergenic 20.0%
!! TACGACATTACATTAATATA+TGG + chr1_2:65135409-65135428 Msa0085170:intron 20.0%
!! AAACAGGATAAATTTAACTA+AGG + chr1_2:65135552-65135571 Msa0085170:intron 20.0%
!!! TGTTTAATTTGTAGTTTGTT+TGG - chr1_2:65136026-65136045 None:intergenic 20.0%
!! AATTAAACAACTTCAATATC+GGG + chr1_2:65136037-65136056 Msa0085170:intron 20.0%
!!! CTTTTAATGTGTTAATAAGT+GGG - chr1_2:65136108-65136127 None:intergenic 20.0%
!!! TCTTTTAATGTGTTAATAAG+TGG - chr1_2:65136109-65136128 None:intergenic 20.0%
!!! TTTGTTAAAGAGTTCTATTT+TGG - chr1_2:65136143-65136162 None:intergenic 20.0%
!! CAAGATAATAATTAATTGAG+TGG + chr1_2:65136196-65136215 Msa0085170:intron 20.0%
!!! GATAAATAAATCATTTTGGT+TGG + chr1_2:65137115-65137134 Msa0085170:intron 20.0%
!!! ATGTTTTGGTTTTTATCATT+TGG + chr1_2:65137286-65137305 Msa0085170:intron 20.0%
!! AAAATCTTCAATCAGTATTA+TGG + chr1_2:65137387-65137406 Msa0085170:intron 20.0%
!!! AAGAAAAGTTGTGTTTTTAT+GGG - chr1_2:65137731-65137750 None:intergenic 20.0%
!!! TAAGAAAAGTTGTGTTTTTA+TGG - chr1_2:65137732-65137751 None:intergenic 20.0%
!!! ATAAAAACACAACTTTTCTT+AGG + chr1_2:65137731-65137750 Msa0085170:intron 20.0%
!!! TAAAAACACAACTTTTCTTA+GGG + chr1_2:65137732-65137751 Msa0085170:intron 20.0%
!! AACTAACAAACAAGATATAT+AGG - chr1_2:65137777-65137796 None:intergenic 20.0%
!! CTTGTTCTATATATTACTAA+TGG + chr1_2:65137802-65137821 Msa0085170:intron 20.0%
!! TTCTATATATTACTAATGGT+GGG + chr1_2:65137806-65137825 Msa0085170:intron 20.0%
!!! TTTTTTAGAGAGAAATTCTT+AGG + chr1_2:65137953-65137972 Msa0085170:intron 20.0%
!! AAATGATTCATTATTTATGC+AGG - chr1_2:65138299-65138318 None:intergenic 20.0%
!!! CATTTTGTTTTGTTTTTTTC+AGG + chr1_2:65138314-65138333 Msa0085170:intron 20.0%
!!! TCATAATCAAAATTTGACTT+TGG + chr1_2:65138552-65138571 Msa0085170:intron 20.0%
!! TTATATCCTTATCAACATTA+TGG + chr1_2:65138580-65138599 Msa0085170:intron 20.0%
!!! TAATATAATTGAGGTTTGTT+TGG - chr1_2:65139408-65139427 None:intergenic 20.0%
!! TTGAGATGATAATATAATTG+AGG - chr1_2:65139417-65139436 None:intergenic 20.0%
!! TATTTACTATTTACAGTCAA+AGG - chr1_2:65139456-65139475 None:intergenic 20.0%
!! TTGAAATTATTAATTACTGC+AGG + chr1_2:65139478-65139497 Msa0085170:intron 20.0%
! TCATCAAATTGTCATTATCA+TGG - chr1_2:65128543-65128562 None:intergenic 25.0%
!! TTGAGACATCATCAAATTTT+TGG - chr1_2:65128708-65128727 None:intergenic 25.0%
! ATGTCTCAACTACTTTAATT+TGG + chr1_2:65128719-65128738 Msa0085170:intron 25.0%
!!! TACTTTAATTTGGTACTACA+AGG + chr1_2:65128729-65128748 Msa0085170:intron 25.0%
! TTACTTCAAAATAGTGTGAA+TGG + chr1_2:65128760-65128779 Msa0085170:intron 25.0%
! AAAGGAACAGGTTATATATA+TGG + chr1_2:65128923-65128942 Msa0085170:intron 25.0%
! GAACAAGATACATAATTCAT+TGG - chr1_2:65129012-65129031 None:intergenic 25.0%
! TCATTAAACGAAATATCTAG+TGG + chr1_2:65129102-65129121 Msa0085170:intron 25.0%
!!! GGACCATTTTTTGTAATTTT+GGG - chr1_2:65129236-65129255 None:intergenic 25.0%
!!! AGGACCATTTTTTGTAATTT+TGG - chr1_2:65129237-65129256 None:intergenic 25.0%
!!! TATTTTGGAGATCAAAGTTT+TGG - chr1_2:65129287-65129306 None:intergenic 25.0%
!! TTTTGTGCATTGTCATATTT+TGG - chr1_2:65129302-65129321 None:intergenic 25.0%
! GCAAAGATTGATTAAATTTG+TGG - chr1_2:65129375-65129394 None:intergenic 25.0%
! TGGATTAAGAAATGCTAAAT+TGG - chr1_2:65129814-65129833 None:intergenic 25.0%
! TAGCATTTCTTAATCCAATT+TGG + chr1_2:65129817-65129836 Msa0085170:intron 25.0%
! TGGTAAGATTGAATTAACTA+AGG + chr1_2:65130065-65130084 Msa0085170:intron 25.0%
! AAAGTAGTAAAAGGTTGTTA+AGG + chr1_2:65130136-65130155 Msa0085170:intron 25.0%
!!! AGATACTGATTTGACAATTA+TGG + chr1_2:65130306-65130325 Msa0085170:intron 25.0%
! AAAGTTACTTCAAAAGATGA+AGG - chr1_2:65130768-65130787 None:intergenic 25.0%
! ATAGTTGATCTTAATCATGA+TGG + chr1_2:65130932-65130951 Msa0085170:intron 25.0%
! CTATTAAGGTTATCTTATGA+AGG + chr1_2:65131465-65131484 Msa0085170:intron 25.0%
! AAAACAAAAGACAATCAAGA+GGG - chr1_2:65131547-65131566 None:intergenic 25.0%
! TAAAACAAAAGACAATCAAG+AGG - chr1_2:65131548-65131567 None:intergenic 25.0%
! TGTTTATCATTGTAGTTTGA+TGG + chr1_2:65131570-65131589 Msa0085170:intron 25.0%
! AAATAGTTCAAACTGTTCAT+CGG - chr1_2:65131619-65131638 None:intergenic 25.0%
! GAACAAAGATGAAATAGTTA+GGG - chr1_2:65131855-65131874 None:intergenic 25.0%
! GGTTAGAAATAGGAATTAAT+TGG + chr1_2:65131921-65131940 Msa0085170:intron 25.0%
! TCTTCTTAAAATAAACAAGG+GGG + chr1_2:65132020-65132039 Msa0085170:intron 25.0%
!!! TAAATTAAAGCTTTAAAGCC+TGG - chr1_2:65132108-65132127 None:intergenic 25.0%
! AAACCAATTCACAAAATTTC+AGG + chr1_2:65132155-65132174 Msa0085170:intron 25.0%
! AACCAATTCACAAAATTTCA+GGG + chr1_2:65132156-65132175 Msa0085170:intron 25.0%
!!! TTTATTTTGTGGTGTTGAAT+AGG - chr1_2:65132197-65132216 None:intergenic 25.0%
!! AAATTTCCTTTTCCTCAAAT+GGG + chr1_2:65132372-65132391 Msa0085170:intron 25.0%
!! TTGCATCAATGTTTTCTATT+AGG - chr1_2:65132457-65132476 None:intergenic 25.0%
! AGAGTTTAGACACAATAATT+TGG + chr1_2:65132490-65132509 Msa0085170:intron 25.0%
!! AACATTATTTTCCTAAGACT+AGG + chr1_2:65132524-65132543 Msa0085170:intron 25.0%
! CGATAAACACACTTATATTT+CGG + chr1_2:65132613-65132632 Msa0085170:intron 25.0%
! AGGTTCATTCTAATAAGAAT+AGG - chr1_2:65132659-65132678 None:intergenic 25.0%
!!! ATAAACATTTTTTGGCTGTT+GGG - chr1_2:65132692-65132711 None:intergenic 25.0%
!!! AATAAACATTTTTTGGCTGT+TGG - chr1_2:65132693-65132712 None:intergenic 25.0%
!!! CATTTTTAGTCATCAACAAA+AGG - chr1_2:65133088-65133107 None:intergenic 25.0%
!!! TGATTGCTATTTCATTATTG+TGG + chr1_2:65133106-65133125 Msa0085170:intron 25.0%
!! AATTTTCTTTAGTAGTAGAG+TGG + chr1_2:65133185-65133204 Msa0085170:intron 25.0%
!!! AGAGTGGTTTTTTTTTTTCA+CGG + chr1_2:65133201-65133220 Msa0085170:intron 25.0%
! AATTAATACTTCCAAAACCT+TGG + chr1_2:65133446-65133465 Msa0085170:intron 25.0%
!!! TTAGTTTTTTGAATAGGACA+AGG + chr1_2:65133496-65133515 Msa0085170:intron 25.0%
! ACGTTGTGTATAAAGAAAAA+TGG + chr1_2:65133973-65133992 Msa0085170:intron 25.0%
!! ATAAAGAAAAATGGTGTTGA+TGG + chr1_2:65133982-65134001 Msa0085170:intron 25.0%
!!! TAAAGAAAAATGGTGTTGAT+GGG + chr1_2:65133983-65134002 Msa0085170:intron 25.0%
!!! ATTCAGTTAATCACTTTTAG+TGG - chr1_2:65134009-65134028 None:intergenic 25.0%
! GAAAAAGAGTCTTTATTAGA+AGG + chr1_2:65134097-65134116 Msa0085170:intron 25.0%
! TTGTATTCAGTTGTTGTAAA+AGG + chr1_2:65134120-65134139 Msa0085170:intron 25.0%
!!! AAGCGACACTTATTTTAAAA+CGG - chr1_2:65134269-65134288 None:intergenic 25.0%
!! TTTGTTGTCTTATTCAGATT+GGG - chr1_2:65134653-65134672 None:intergenic 25.0%
!! AACTATGTTGTACTTTTCAA+TGG - chr1_2:65134676-65134695 None:intergenic 25.0%
!! ATTGAAAAGTACAACATAGT+TGG + chr1_2:65134675-65134694 Msa0085170:intron 25.0%
! TACTACTATTACTTTAGCAA+AGG + chr1_2:65134955-65134974 Msa0085170:intron 25.0%
! TATGAAACAAATTAGACAGT+TGG - chr1_2:65135069-65135088 None:intergenic 25.0%
!!! TCTGAATTTTAGCCAAATTA+AGG + chr1_2:65135106-65135125 Msa0085170:intron 25.0%
!!! CTGAATTTTAGCCAAATTAA+GGG + chr1_2:65135107-65135126 Msa0085170:intron 25.0%
! AAGTTTCTTATAACACAACA+AGG + chr1_2:65135136-65135155 Msa0085170:intron 25.0%
! AATTAGAAGATGAACTATAG+TGG + chr1_2:65135481-65135500 Msa0085170:intron 25.0%
! TCACTATATAATTGTCTGTT+TGG - chr1_2:65135697-65135716 None:intergenic 25.0%
! TTAATGGCAAATGTGTTAAA+TGG + chr1_2:65135763-65135782 Msa0085170:intron 25.0%
!!! CTTGCTGTTGAATATAAAAT+TGG - chr1_2:65135832-65135851 None:intergenic 25.0%
!! CAATTTTATATTCAACAGCA+AGG + chr1_2:65135830-65135849 Msa0085170:intron 25.0%
! ACATCCAAAAGTTATATCAA+AGG + chr1_2:65135939-65135958 Msa0085170:intron 25.0%
!! TCATCCTTTGATATAACTTT+TGG - chr1_2:65135946-65135965 None:intergenic 25.0%
! AAAAGTTATATCAAAGGATG+AGG + chr1_2:65135945-65135964 Msa0085170:intron 25.0%
! AAAGTTATATCAAAGGATGA+GGG + chr1_2:65135946-65135965 Msa0085170:intron 25.0%
! ATTAAACAACTTCAATATCG+GGG + chr1_2:65136038-65136057 Msa0085170:intron 25.0%
!!! TTTTTTACTTGTGTGTAGTT+AGG + chr1_2:65136273-65136292 Msa0085170:intron 25.0%
!!! CATTATGTCACATTTTGTTT+GGG - chr1_2:65136394-65136413 None:intergenic 25.0%
! TTACTTGCATTACATTCTAT+AGG - chr1_2:65136449-65136468 None:intergenic 25.0%
! ATGCATATTAGTAGTTAAGT+TGG + chr1_2:65136486-65136505 Msa0085170:intron 25.0%
!!! AAAGGTGTTTGTATTTTGTT+TGG - chr1_2:65136632-65136651 None:intergenic 25.0%
! ATAATAGTTACACAACACTA+AGG - chr1_2:65137008-65137027 None:intergenic 25.0%
!!! ATCCATGTCTATTAGTTTTT+TGG + chr1_2:65137180-65137199 Msa0085170:intron 25.0%
! AACCAAAAAACTAATAGACA+TGG - chr1_2:65137185-65137204 None:intergenic 25.0%
! TAAATAAAAATGGAGTCTGA+TGG + chr1_2:65137261-65137280 Msa0085170:intron 25.0%
!!! CTGTATTTTTTTTACTGTTG+AGG - chr1_2:65137325-65137344 None:intergenic 25.0%
!! GTTTTCACACTAATTTTCAA+AGG - chr1_2:65137469-65137488 None:intergenic 25.0%
! AGTAAATTGAACAGAAAAGT+TGG - chr1_2:65137677-65137696 None:intergenic 25.0%
! GTTCTATATATTACTAATGG+TGG + chr1_2:65137805-65137824 Msa0085170:intron 25.0%
!!! TGATGATGCAACTTTAATTT+TGG - chr1_2:65137886-65137905 None:intergenic 25.0%
! CATCATCATCATCATTATTA+TGG + chr1_2:65137898-65137917 Msa0085170:intron 25.0%
!!! TTCTCTTTTTTAGAACTATG+AGG + chr1_2:65138137-65138156 Msa0085170:intron 25.0%
! TAGGATATTTCTTATCTTTG+TGG - chr1_2:65138726-65138745 None:intergenic 25.0%
! AAAGATAAGAAATATCCTAC+AGG + chr1_2:65138727-65138746 Msa0085170:CDS 25.0%
! ACTTCCAAAAACAGAATAAT+AGG + chr1_2:65138814-65138833 Msa0085170:CDS 25.0%
!! CATTCCTATTATTCTGTTTT+TGG - chr1_2:65138821-65138840 None:intergenic 25.0%
! AAAACAGAATAATAGGAATG+AGG + chr1_2:65138821-65138840 Msa0085170:CDS 25.0%
! AAACCAAAATACTCTTGTTA+TGG + chr1_2:65139745-65139764 Msa0085170:CDS 25.0%
! AATCAAGCTAATCATATCTT+AGG + chr1_2:65140043-65140062 Msa0085170:CDS 25.0%
AATTGTTCCACCTATTTGAA+TGG + chr1_2:65128649-65128668 Msa0085170:intron 30.0%
ATAACTTCCATTCAAATAGG+TGG - chr1_2:65128659-65128678 None:intergenic 30.0%
CTGAATAAAAACAAAGGAAC+AGG + chr1_2:65128911-65128930 Msa0085170:intron 30.0%
! TCATTGGCTGAAAGAAAAAA+GGG - chr1_2:65128996-65129015 None:intergenic 30.0%
! TTCATTGGCTGAAAGAAAAA+AGG - chr1_2:65128997-65129016 None:intergenic 30.0%
AGCATTATGGTATTTGAGAA+AGG + chr1_2:65129455-65129474 Msa0085170:intron 30.0%
TCTAATTGAAGCAATTGGTA+TGG + chr1_2:65129540-65129559 Msa0085170:intron 30.0%
! ATAGATTTTCCACTTCTGAT+TGG - chr1_2:65129869-65129888 None:intergenic 30.0%
!! ACCTATGAGAAATTTTGACA+TGG + chr1_2:65129993-65130012 Msa0085170:intron 30.0%
!! CCTATGAGAAATTTTGACAT+GGG + chr1_2:65129994-65130013 Msa0085170:intron 30.0%
CAAAAACTAGCTCAAATGAT+AGG - chr1_2:65130576-65130595 None:intergenic 30.0%
ATTTAACAAGAAATCAGAGC+TGG + chr1_2:65130619-65130638 Msa0085170:intron 30.0%
ATTAAAAATATAGGAGGGCT+AGG + chr1_2:65131157-65131176 Msa0085170:intron 30.0%
TGACAAGTACAAAACAAGTA+GGG - chr1_2:65131218-65131237 None:intergenic 30.0%
TTGACAAGTACAAAACAAGT+AGG - chr1_2:65131219-65131238 None:intergenic 30.0%
!!! TTGGTACCAAGTTTTTTAAG+TGG + chr1_2:65131253-65131272 Msa0085170:intron 30.0%
!!! TGGTACCAAGTTTTTTAAGT+GGG + chr1_2:65131254-65131273 Msa0085170:intron 30.0%
! TTTTCTCCGAAAATAATCCA+AGG + chr1_2:65131423-65131442 Msa0085170:intron 30.0%
! CTCTATCCTTGGATTATTTT+CGG - chr1_2:65131432-65131451 None:intergenic 30.0%
! GGAATTAGTTGTTGCTATTA+AGG + chr1_2:65131451-65131470 Msa0085170:intron 30.0%
ACCACTCTTAATACAAACAA+GGG - chr1_2:65131517-65131536 None:intergenic 30.0%
AACCACTCTTAATACAAACA+AGG - chr1_2:65131518-65131537 None:intergenic 30.0%
AATAGTTCAAACTGTTCATC+GGG - chr1_2:65131618-65131637 None:intergenic 30.0%
GGAACAAAGATGAAATAGTT+AGG - chr1_2:65131856-65131875 None:intergenic 30.0%
AATTTGATGAAGACGAAAGA+AGG - chr1_2:65131882-65131901 None:intergenic 30.0%
GTCTTCATCAAATTGATCAT+TGG + chr1_2:65131888-65131907 Msa0085170:intron 30.0%
AATAAACAAGGGGGATATAA+TGG + chr1_2:65132029-65132048 Msa0085170:intron 30.0%
CTCTATCAAGAATGAATCAT+AGG - chr1_2:65132271-65132290 None:intergenic 30.0%
CTATGATTCATTCTTGATAG+AGG + chr1_2:65132269-65132288 Msa0085170:intron 30.0%
! CAAATTTCCTTTTCCTCAAA+TGG + chr1_2:65132371-65132390 Msa0085170:intron 30.0%
!! TTTTACTTTGACCTAGTCTT+AGG - chr1_2:65132538-65132557 None:intergenic 30.0%
TAAACACACTTATATTTCGG+TGG + chr1_2:65132616-65132635 Msa0085170:intron 30.0%
GTGAAACCAAACAATTGAAA+TGG - chr1_2:65132911-65132930 None:intergenic 30.0%
ATTTACTGGTATACATCAGT+AGG - chr1_2:65133003-65133022 None:intergenic 30.0%
CAAAACATGCTAAATCGATT+TGG + chr1_2:65133548-65133567 Msa0085170:intron 30.0%
!! TTTTTATTTGCAGTGGTGTT+TGG - chr1_2:65133629-65133648 None:intergenic 30.0%
!!! CTTGTCTTTTTTATTTGCAG+TGG - chr1_2:65133636-65133655 None:intergenic 30.0%
!! CTAATTTTAATATACGCCCT+AGG + chr1_2:65133690-65133709 Msa0085170:intron 30.0%
!!! TATCCGTTTTTAAGTTAGCT+TGG - chr1_2:65133717-65133736 None:intergenic 30.0%
!!! TGTACTACTTTGTTTTGTTG+TGG - chr1_2:65133766-65133785 None:intergenic 30.0%
TAGTACATATAAGCAAGTCT+TGG + chr1_2:65133779-65133798 Msa0085170:intron 30.0%
AGTACATATAAGCAAGTCTT+GGG + chr1_2:65133780-65133799 Msa0085170:intron 30.0%
GCATAGTGATGACATTATAT+TGG + chr1_2:65133895-65133914 Msa0085170:intron 30.0%
!! TTGTTGTAAAAGGTACTTTC+AGG + chr1_2:65134130-65134149 Msa0085170:intron 30.0%
!! TGTTGTAAAAGGTACTTTCA+GGG + chr1_2:65134131-65134150 Msa0085170:intron 30.0%
CTTTCAGGGTGTATATAATA+TGG + chr1_2:65134145-65134164 Msa0085170:intron 30.0%
!!! GACACTTATTTTAAAACGGA+GGG - chr1_2:65134265-65134284 None:intergenic 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - chr1_2:65134375-65134394 None:intergenic 30.0%
!! GTTTGTTGTCTTATTCAGAT+TGG - chr1_2:65134654-65134673 None:intergenic 30.0%
! CAGGAGAAGTATATTATACT+TGG - chr1_2:65134850-65134869 None:intergenic 30.0%
! TTTTAGCCAAATTAAGGGTA+AGG + chr1_2:65135112-65135131 Msa0085170:intron 30.0%
AACTTACCTTACCCTTAATT+TGG - chr1_2:65135121-65135140 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr1_2:65135267-65135286 Msa0085170:intron 30.0%
CATAATATATGCAAGGTCTA+GGG + chr1_2:65135274-65135293 Msa0085170:intron 30.0%
AACCACATAAACAAACAAAC+AGG + chr1_2:65135536-65135555 Msa0085170:intron 30.0%
ATCCTGTTTGTTTGTTTATG+TGG - chr1_2:65135541-65135560 None:intergenic 30.0%
CAGGATAAATTTAACTAAGG+TGG + chr1_2:65135555-65135574 Msa0085170:intron 30.0%
TGATCATAAACAGTTTGATG+TGG + chr1_2:65135613-65135632 Msa0085170:intron 30.0%
TTCTTTAGCTAATTCCTCAA+TGG - chr1_2:65135729-65135748 None:intergenic 30.0%
TTAATGTGTTAATAAGTGGG+AGG - chr1_2:65136105-65136124 None:intergenic 30.0%
!! GTTCTATTTTGGATGAGATA+TGG - chr1_2:65136132-65136151 None:intergenic 30.0%
!! ATCTTGTGTTTGGTTTCTTT+TGG - chr1_2:65136182-65136201 None:intergenic 30.0%
GTTCAATCTGTTTGTGTTAA+CGG + chr1_2:65136302-65136321 Msa0085170:intron 30.0%
! GCATTATGTCACATTTTGTT+TGG - chr1_2:65136395-65136414 None:intergenic 30.0%
AAACTTAGGGTAGAATATAG+AGG + chr1_2:65136561-65136580 Msa0085170:intron 30.0%
! AATATAGAGGTGTAACTAAG+AGG + chr1_2:65136574-65136593 Msa0085170:intron 30.0%
! ATATAGAGGTGTAACTAAGA+GGG + chr1_2:65136575-65136594 Msa0085170:intron 30.0%
!! GTGTTTGTATTTTGTTTGGA+CGG - chr1_2:65136628-65136647 None:intergenic 30.0%
GTGAATGTTTGTTTAAAGAG+AGG - chr1_2:65136800-65136819 None:intergenic 30.0%
GATGTGTTAAGAGAGTAATA+AGG - chr1_2:65136825-65136844 None:intergenic 30.0%
TCTTCAATCAGTATTATGGA+TGG + chr1_2:65137391-65137410 Msa0085170:intron 30.0%
TGTGACCAAAGAAAATTTCT+TGG - chr1_2:65137986-65138005 None:intergenic 30.0%
TTTATTTGTGTAGAGAGAGA+AGG + chr1_2:65138059-65138078 Msa0085170:intron 30.0%
TAAACCAGAACCAAGAAATT+TGG - chr1_2:65138108-65138127 None:intergenic 30.0%
!!! ACATATTTCTTTTTTGGCCA+AGG - chr1_2:65138240-65138259 None:intergenic 30.0%
TGATCTAGATGTTATTGTTG+AGG + chr1_2:65138452-65138471 Msa0085170:CDS 30.0%
ATCTCTACAAAATTGAACCA+TGG + chr1_2:65138478-65138497 Msa0085170:CDS 30.0%
TCTCTACAAAATTGAACCAT+GGG + chr1_2:65138479-65138498 Msa0085170:CDS 30.0%
! AAGACACTTGTCTTTTACAA+GGG + chr1_2:65138844-65138863 Msa0085170:CDS 30.0%
! AATCAGTTTTCCTTCCATTT+GGG - chr1_2:65138876-65138895 None:intergenic 30.0%
TACTTGTGCATGTTTGAAAA+TGG - chr1_2:65139203-65139222 None:intergenic 30.0%
TATTAATTACTGCAGGAAGA+AGG + chr1_2:65139485-65139504 Msa0085170:intron 30.0%
! TGTTGTTGATTACTATACCA+TGG - chr1_2:65139569-65139588 None:intergenic 30.0%
!!! TGTCCATAACAAGAGTATTT+TGG - chr1_2:65139751-65139770 None:intergenic 30.0%
!! TTCATTGCAAAACTTGTTGT+TGG - chr1_2:65139809-65139828 None:intergenic 30.0%
!! AAAGAAAGTACTCATCACAA+TGG + chr1_2:65139827-65139846 Msa0085170:CDS 30.0%
AAGAATATTGCAGTGAAGAA+AGG + chr1_2:65139861-65139880 Msa0085170:CDS 30.0%
ACAATGGACAAGTAATTGAT+TGG + chr1_2:65139900-65139919 Msa0085170:CDS 30.0%
AGTAATTGATTGGAAAAGCT+TGG + chr1_2:65139910-65139929 Msa0085170:CDS 30.0%
CAAATTGTCATTATCATGGC+CGG - chr1_2:65128539-65128558 None:intergenic 35.0%
! CTTGTCTTTCTTCAGCTTTT+GGG - chr1_2:65128833-65128852 None:intergenic 35.0%
! TCTTGTCTTTCTTCAGCTTT+TGG - chr1_2:65128834-65128853 None:intergenic 35.0%
GCATGCAATATAAGGAACAA+AGG - chr1_2:65128959-65128978 None:intergenic 35.0%
AAACGAAATATCTAGTGGTG+TGG + chr1_2:65129107-65129126 Msa0085170:intron 35.0%
!! GTAGGGCATTTTCCTAATAA+TGG + chr1_2:65129151-65129170 Msa0085170:intron 35.0%
CACTCTCTAATTGAAGCAAT+TGG + chr1_2:65129535-65129554 Msa0085170:intron 35.0%
ATCATTTGCGTCTACCAAAT+TGG - chr1_2:65129834-65129853 None:intergenic 35.0%
GAACTATAACCAATCAGAAG+TGG + chr1_2:65129857-65129876 Msa0085170:intron 35.0%
CCCATGTCAAAATTTCTCAT+AGG - chr1_2:65129997-65130016 None:intergenic 35.0%
ACTCCTTCTTATGTACTAGT+CGG - chr1_2:65130241-65130260 None:intergenic 35.0%
TTTGTACTTGTCAATTCGCT+TGG + chr1_2:65131225-65131244 Msa0085170:intron 35.0%
!!! ACCAAGTTTTTTAAGTGGGT+TGG + chr1_2:65131258-65131277 Msa0085170:intron 35.0%
TCCAACCCACTTAAAAAACT+TGG - chr1_2:65131262-65131281 None:intergenic 35.0%
TACTATATGGAAGACTTGTG+AGG + chr1_2:65131384-65131403 Msa0085170:intron 35.0%
CGAAAATAATCCAAGGATAG+AGG + chr1_2:65131430-65131449 Msa0085170:intron 35.0%
ACAACTAATTCCTCTATCCT+TGG - chr1_2:65131443-65131462 None:intergenic 35.0%
! TGACTTCTAGCTAAGAAGAA+AGG + chr1_2:65131488-65131507 Msa0085170:intron 35.0%
! GACTTCTAGCTAAGAAGAAA+GGG + chr1_2:65131489-65131508 Msa0085170:intron 35.0%
! ACTTCTAGCTAAGAAGAAAG+GGG + chr1_2:65131490-65131509 Msa0085170:intron 35.0%
! ACCCTTGTTTGTATTAAGAG+TGG + chr1_2:65131513-65131532 Msa0085170:intron 35.0%
! AGTTTTCCAATGTAGTACCA+TGG - chr1_2:65131826-65131845 None:intergenic 35.0%
AAAGATGAAATAGTTAGGGC+TGG - chr1_2:65131851-65131870 None:intergenic 35.0%
! TCAAATTGATCATTGGTTGC+AGG + chr1_2:65131895-65131914 Msa0085170:intron 35.0%
!! CTTTAAAGCCTGGAATCAAA+GGG - chr1_2:65132098-65132117 None:intergenic 35.0%
! AGCCCTGAAATTTTGTGAAT+TGG - chr1_2:65132161-65132180 None:intergenic 35.0%
ATTAGCACTGCAATAGACTT+TGG - chr1_2:65132426-65132445 None:intergenic 35.0%
TTCAGTTCCTACGTAAAGAA+GGG + chr1_2:65132771-65132790 Msa0085170:intron 35.0%
ACTAAAACCCTTCTTTACGT+AGG - chr1_2:65132781-65132800 None:intergenic 35.0%
! ACTAGACTTTGTTTACCTCT+CGG - chr1_2:65132818-65132837 None:intergenic 35.0%
!! TTCACTTAAGTCGTTTTGAC+TGG + chr1_2:65132926-65132945 Msa0085170:intron 35.0%
! TTTAAGTTAGCTTGGTCCTA+GGG - chr1_2:65133709-65133728 None:intergenic 35.0%
!!! TTTTAAGTTAGCTTGGTCCT+AGG - chr1_2:65133710-65133729 None:intergenic 35.0%
GGACCAAGCTAACTTAAAAA+CGG + chr1_2:65133711-65133730 Msa0085170:intron 35.0%
!!! CGACACTTATTTTAAAACGG+AGG - chr1_2:65134266-65134285 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG - chr1_2:65134306-65134325 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_2:65134503-65134522 Msa0085170:intron 35.0%
!! TGGATCAAAAAGGCCATTTT+GGG - chr1_2:65134830-65134849 None:intergenic 35.0%
! TTGGATCAAAAAGGCCATTT+TGG - chr1_2:65134831-65134850 None:intergenic 35.0%
TAGTAGTATATCTCTGATGC+AGG - chr1_2:65134943-65134962 None:intergenic 35.0%
CAATAATCAAGTCATGTAGC+TGG + chr1_2:65135006-65135025 Msa0085170:intron 35.0%
GCATAATATATGCAAGGTCT+AGG + chr1_2:65135273-65135292 Msa0085170:intron 35.0%
ATAAACAGTTTGATGTGGAC+AGG + chr1_2:65135618-65135637 Msa0085170:intron 35.0%
! ACAAATGCAATGGTGCTAAA+TGG + chr1_2:65135662-65135681 Msa0085170:intron 35.0%
! CAAATGCAATGGTGCTAAAT+GGG + chr1_2:65135663-65135682 Msa0085170:intron 35.0%
AGTGAAATTAACCTCCATTG+AGG + chr1_2:65135712-65135731 Msa0085170:intron 35.0%
TTTAGCTAATTCCTCAATGG+AGG - chr1_2:65135726-65135745 None:intergenic 35.0%
CTCTAATGTGAGATTGAACA+CGG - chr1_2:65135897-65135916 None:intergenic 35.0%
CATTTATACATCCAACAACC+TGG + chr1_2:65135979-65135998 Msa0085170:intron 35.0%
TTTACTTGTGTGTAGTTAGG+AGG + chr1_2:65136276-65136295 Msa0085170:intron 35.0%
!! TCACATTTTGTTTGGGAAGT+CGG - chr1_2:65136387-65136406 None:intergenic 35.0%
! TATAGAGGTGTAACTAAGAG+GGG + chr1_2:65136576-65136595 Msa0085170:intron 35.0%
ATGTTGTACAGAAAAGAAGC+AGG - chr1_2:65136735-65136754 None:intergenic 35.0%
GTGTTAAGAGAGTAATAAGG+TGG - chr1_2:65136822-65136841 None:intergenic 35.0%
TGTCATATTCTTCTTGATCG+AGG - chr1_2:65136916-65136935 None:intergenic 35.0%
TTCTCAGATGAGTCTGTTAA+AGG + chr1_2:65137053-65137072 Msa0085170:intron 35.0%
! GACAGCAAAGTCAATCTTTT+CGG + chr1_2:65137651-65137670 Msa0085170:intron 35.0%
AGCATGTGCAATTCCAAAAT+TGG - chr1_2:65137848-65137867 None:intergenic 35.0%
AAAATTGCACTAGCTAGCTA+GGG - chr1_2:65137937-65137956 None:intergenic 35.0%
AAAAATTGCACTAGCTAGCT+AGG - chr1_2:65137938-65137957 None:intergenic 35.0%
! CAGGACCAAGAAATTTTCTT+TGG + chr1_2:65137978-65137997 Msa0085170:intron 35.0%
TCTTCTCTCTCTTCTTTCTT+TGG - chr1_2:65138010-65138029 None:intergenic 35.0%
TGTGACCAAACCAAATTTCT+TGG + chr1_2:65138095-65138114 Msa0085170:intron 35.0%
CAGAACCAAGAAATTTGGTT+TGG - chr1_2:65138103-65138122 None:intergenic 35.0%
CAAACCAAATTTCTTGGTTC+TGG + chr1_2:65138101-65138120 Msa0085170:intron 35.0%
ATGCTGCCTTAATTACCATT+AGG + chr1_2:65138214-65138233 Msa0085170:intron 35.0%
GAGATCATCATCAATGGATA+TGG + chr1_2:65138338-65138357 Msa0085170:CDS 35.0%
CAACAGAAGAAGAACTTGTA+GGG + chr1_2:65138394-65138413 Msa0085170:CDS 35.0%
CATGCTCCATAATGTTGATA+AGG - chr1_2:65138589-65138608 None:intergenic 35.0%
! CTATTAGTTCTTGTTCCTGT+AGG - chr1_2:65138745-65138764 None:intergenic 35.0%
!! ATTTTGGAAAGCTACTGGAA+GGG + chr1_2:65138780-65138799 Msa0085170:CDS 35.0%
! GAAGACACTTGTCTTTTACA+AGG + chr1_2:65138843-65138862 Msa0085170:CDS 35.0%
! ATCAGTTTTCCTTCCATTTG+GGG - chr1_2:65138875-65138894 None:intergenic 35.0%
! CAATCAGTTTTCCTTCCATT+TGG - chr1_2:65138877-65138896 None:intergenic 35.0%
CAAATGGAAGGAAAACTGAT+TGG + chr1_2:65138875-65138894 Msa0085170:CDS 35.0%
AGACATCAAACTTCTGAACA+TGG + chr1_2:65138913-65138932 Msa0085170:CDS 35.0%
! ATGCTAAAATAACTTGCCTG+TGG - chr1_2:65138943-65138962 None:intergenic 35.0%
TTGTGCATGTTTGAAAATGG+AGG - chr1_2:65139200-65139219 None:intergenic 35.0%
! TCATCTGATCTGAAATACTG+TGG - chr1_2:65139593-65139612 None:intergenic 35.0%
AACTGTTGATCGTTGCTAAA+GGG - chr1_2:65139719-65139738 None:intergenic 35.0%
AAACTGTTGATCGTTGCTAA+AGG - chr1_2:65139720-65139739 None:intergenic 35.0%
! TGACTATGAGGTATCATCAA+TGG - chr1_2:65140001-65140020 None:intergenic 35.0%
AGTTCCTATTAAGACCACTC+TGG + chr1_2:65128459-65128478 Msa0085170:CDS 40.0%
!! CATTGACACAAGTTGGTTAC+CGG + chr1_2:65128517-65128536 Msa0085170:intron 40.0%
TTAGGAAAATGCCCTACCTA+AGG - chr1_2:65129148-65129167 None:intergenic 40.0%
GTATGGTGTGATCAATGTGA+AGG + chr1_2:65129557-65129576 Msa0085170:intron 40.0%
CTAAGGAAATACTACGTGCT+AGG + chr1_2:65130082-65130101 Msa0085170:intron 40.0%
GACTAGTACATAAGAAGGAG+TGG + chr1_2:65130240-65130259 Msa0085170:intron 40.0%
GTACATAAGAAGGAGTGGAT+AGG + chr1_2:65130245-65130264 Msa0085170:intron 40.0%
TGGACAGTTGAATGTACATG+TGG + chr1_2:65130735-65130754 Msa0085170:intron 40.0%
TACTTGTCAATTCGCTTGGT+TGG + chr1_2:65131229-65131248 Msa0085170:intron 40.0%
TTGGAACGAAGTGATCATGT+GGG + chr1_2:65131277-65131296 Msa0085170:intron 40.0%
CTGATGCTTAACATTCGATG+AGG - chr1_2:65131338-65131357 None:intergenic 40.0%
!! AAACCTTAAGAAGCACTCCA+TGG + chr1_2:65131806-65131825 Msa0085170:intron 40.0%
GATGAAGACGAAAGAAGGTA+TGG - chr1_2:65131877-65131896 None:intergenic 40.0%
! AATTGATCATTGGTTGCAGG+TGG + chr1_2:65131898-65131917 Msa0085170:intron 40.0%
! ATTGATCATTGGTTGCAGGT+GGG + chr1_2:65131899-65131918 Msa0085170:intron 40.0%
! CCTACTTGTGAACTTTTGGA+GGG - chr1_2:65131960-65131979 None:intergenic 40.0%
! TCCTACTTGTGAACTTTTGG+AGG - chr1_2:65131961-65131980 None:intergenic 40.0%
! AGGTCCTACTTGTGAACTTT+TGG - chr1_2:65131964-65131983 None:intergenic 40.0%
!! GCTTTAAAGCCTGGAATCAA+AGG - chr1_2:65132099-65132118 None:intergenic 40.0%
ATGTATAGGTCTCCCATTTG+AGG - chr1_2:65132387-65132406 None:intergenic 40.0%
CTTCAGTTCCTACGTAAAGA+AGG + chr1_2:65132770-65132789 Msa0085170:intron 40.0%
AGTGGGGAGACAAAATTTAC+TGG - chr1_2:65133017-65133036 None:intergenic 40.0%
! AAGTGTTCAAGCCAAGGTTT+TGG - chr1_2:65133460-65133479 None:intergenic 40.0%
TGTTGTAAGTGTTCAAGCCA+AGG - chr1_2:65133466-65133485 None:intergenic 40.0%
TGGCTTGAACACTTACAACA+AGG + chr1_2:65133466-65133485 Msa0085170:intron 40.0%
AAGCTTTCTACACAAGCTTC+CGG + chr1_2:65134206-65134225 Msa0085170:intron 40.0%
AAAGTTGGAGAGGGTAAAGT+TGG - chr1_2:65134360-65134379 None:intergenic 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG - chr1_2:65134369-65134388 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_2:65134507-65134526 Msa0085170:intron 40.0%
TCACCACACAAATCCCAAAA+TGG + chr1_2:65134814-65134833 Msa0085170:intron 40.0%
AAGACTACTCAAGAGTAGAC+AGG - chr1_2:65134869-65134888 None:intergenic 40.0%
GGAACTTTGTTAACAGAAGC+AGG + chr1_2:65135027-65135046 Msa0085170:intron 40.0%
ACTTTGTTAACAGAAGCAGG+TGG + chr1_2:65135030-65135049 Msa0085170:intron 40.0%
TACCAACTGAGTTAAGCTCA+CGG - chr1_2:65135245-65135264 None:intergenic 40.0%
! TGAGCTTAACTCAGTTGGTA+AGG + chr1_2:65135245-65135264 Msa0085170:intron 40.0%
!!! ATTTTTTTTGGTCGTGCCCA+AGG - chr1_2:65135306-65135325 None:intergenic 40.0%
ATTAGGCCTCACTTACTCTT+AGG + chr1_2:65135352-65135371 Msa0085170:intron 40.0%
CCATTGCATTTGTTTACACC+TGG - chr1_2:65135655-65135674 None:intergenic 40.0%
CCAGGTGTAAACAAATGCAA+TGG + chr1_2:65135652-65135671 Msa0085170:intron 40.0%
CAATCTGTTTGTGTTAACGG+CGG + chr1_2:65136305-65136324 Msa0085170:intron 40.0%
!! ACATTTTGTTTGGGAAGTCG+GGG - chr1_2:65136385-65136404 None:intergenic 40.0%
!! CACATTTTGTTTGGGAAGTC+GGG - chr1_2:65136386-65136405 None:intergenic 40.0%
! ATAGAGGTGTAACTAAGAGG+GGG + chr1_2:65136577-65136596 Msa0085170:intron 40.0%
TGGCAGATAGATAGATGGAA+AGG - chr1_2:65136650-65136669 None:intergenic 40.0%
ACAGACTCATCTGAGAAGAA+GGG - chr1_2:65137050-65137069 None:intergenic 40.0%
AACAGACTCATCTGAGAAGA+AGG - chr1_2:65137051-65137070 None:intergenic 40.0%
! GGAGTCTGATGGAAATGTTT+TGG + chr1_2:65137272-65137291 Msa0085170:intron 40.0%
ACCTTATGCTTATGAGTGAG+TGG + chr1_2:65137490-65137509 Msa0085170:intron 40.0%
TCCACTCACTCATAAGCATA+AGG - chr1_2:65137494-65137513 None:intergenic 40.0%
ACACATAGCATAGCATAGCA+TGG - chr1_2:65137532-65137551 None:intergenic 40.0%
! GATCAACGATTGTTTTCCAC+AGG + chr1_2:65137557-65137576 Msa0085170:intron 40.0%
! AACGATTGTTTTCCACAGGA+AGG + chr1_2:65137561-65137580 Msa0085170:intron 40.0%
!! TCTCTCAACACTTAAGTTGG+TGG - chr1_2:65137597-65137616 None:intergenic 40.0%
CACTCTCTCAACACTTAAGT+TGG - chr1_2:65137600-65137619 None:intergenic 40.0%
AGAGAGAAATTCTTAGGTGC+AGG + chr1_2:65137959-65137978 Msa0085170:intron 40.0%
CCAAGGCCTAATGGTAATTA+AGG - chr1_2:65138223-65138242 None:intergenic 40.0%
CCTTAATTACCATTAGGCCT+TGG + chr1_2:65138220-65138239 Msa0085170:intron 40.0%
TCAGGAGAGATCATCATCAA+TGG + chr1_2:65138332-65138351 Msa0085170:intron 40.0%
GTTGGATGAAATCTAAACCC+TGG - chr1_2:65138378-65138397 None:intergenic 40.0%
CCTACAAGTTCTTCTTCTGT+TGG - chr1_2:65138396-65138415 None:intergenic 40.0%
CCAACAGAAGAAGAACTTGT+AGG + chr1_2:65138393-65138412 Msa0085170:CDS 40.0%
ATTGAACCATGGGACATTCA+AGG + chr1_2:65138489-65138508 Msa0085170:CDS 40.0%
AATGTACCTTGAATGTCCCA+TGG - chr1_2:65138498-65138517 None:intergenic 40.0%
AATGCAGATAGATGCAAGCT+AGG + chr1_2:65138667-65138686 Msa0085170:intron 40.0%
GATATGAGCAACAGAATGAG+TGG + chr1_2:65138689-65138708 Msa0085170:CDS 40.0%
!! GATTTTGGAAAGCTACTGGA+AGG + chr1_2:65138779-65138798 Msa0085170:CDS 40.0%
! CTAAAATAACTTGCCTGTGG+AGG - chr1_2:65138940-65138959 None:intergenic 40.0%
AATTACTGCAGGAAGAAGGA+TGG + chr1_2:65139489-65139508 Msa0085170:intron 40.0%
ATTACTGCAGGAAGAAGGAT+GGG + chr1_2:65139490-65139509 Msa0085170:intron 40.0%
AAAAGCCAAGTCCAAGTCAT+AGG + chr1_2:65139531-65139550 Msa0085170:CDS 40.0%
CTATACCATGGTTCATAACC+TGG - chr1_2:65139557-65139576 None:intergenic 40.0%
ACTGTTGATCGTTGCTAAAG+GGG - chr1_2:65139718-65139737 None:intergenic 40.0%
GTTGTTGGACTATCTAACTG+TGG - chr1_2:65139794-65139813 None:intergenic 40.0%
! TGTAGCTCATGTTGACTATG+AGG - chr1_2:65140013-65140032 None:intergenic 40.0%
TCCTATTAAGACCACTCTGG+TGG + chr1_2:65128462-65128481 Msa0085170:CDS 45.0%
! TCCACCAGAGTGGTCTTAAT+AGG - chr1_2:65128466-65128485 None:intergenic 45.0%
TTGTGTCAATGGTGACCTGA+CGG - chr1_2:65128508-65128527 None:intergenic 45.0%
AGGTCACCATTGACACAAGT+TGG + chr1_2:65128510-65128529 Msa0085170:intron 45.0%
CGGTAACCAACTTGTGTCAA+TGG - chr1_2:65128519-65128538 None:intergenic 45.0%
CACATGCAGTGTCAGCATTA+TGG + chr1_2:65129442-65129461 Msa0085170:intron 45.0%
!! GCACCGACTAGTACATAAGA+AGG + chr1_2:65130235-65130254 Msa0085170:intron 45.0%
ACCCACATTAGACGTGATGA+TGG + chr1_2:65130672-65130691 Msa0085170:intron 45.0%
CCCATCATCACGTCTAATGT+GGG - chr1_2:65130676-65130695 None:intergenic 45.0%
CCCACATTAGACGTGATGAT+GGG + chr1_2:65130673-65130692 Msa0085170:intron 45.0%
ACCCATCATCACGTCTAATG+TGG - chr1_2:65130677-65130696 None:intergenic 45.0%
AGGAGGGCTAGGATTGAATA+AGG + chr1_2:65131168-65131187 Msa0085170:intron 45.0%
! GTCAATTCGCTTGGTTGGTT+TGG + chr1_2:65131234-65131253 Msa0085170:intron 45.0%
GTTGGAACGAAGTGATCATG+TGG + chr1_2:65131276-65131295 Msa0085170:intron 45.0%
! GTTCATCGGGAGAAGTACAA+AGG - chr1_2:65131605-65131624 None:intergenic 45.0%
! GTACCATGGAGTGCTTCTTA+AGG - chr1_2:65131812-65131831 None:intergenic 45.0%
AGCACTCCATGGTACTACAT+TGG + chr1_2:65131817-65131836 Msa0085170:intron 45.0%
! TTGATCATTGGTTGCAGGTG+GGG + chr1_2:65131900-65131919 Msa0085170:intron 45.0%
TTGCAGGTGGGGTTAGAAAT+AGG + chr1_2:65131911-65131930 Msa0085170:intron 45.0%
AATTAATTGGGCCCCACAGT+AGG + chr1_2:65131934-65131953 Msa0085170:intron 45.0%
CCCTCCAAAAGTTCACAAGT+AGG + chr1_2:65131957-65131976 Msa0085170:intron 45.0%
TATCCGTACCCTTTGATTCC+AGG + chr1_2:65132087-65132106 Msa0085170:intron 45.0%
AAGCCTGGAATCAAAGGGTA+CGG - chr1_2:65132093-65132112 None:intergenic 45.0%
! CTGCCTCGAATGCCTTTTAT+TGG + chr1_2:65132293-65132312 Msa0085170:intron 45.0%
!! GCACCAATAAAAGGCATTCG+AGG - chr1_2:65132299-65132318 None:intergenic 45.0%
AGGTCTCCCATTTGAGGAAA+AGG - chr1_2:65132381-65132400 None:intergenic 45.0%
TAAACTGAAGTTCGACCGAG+AGG + chr1_2:65132800-65132819 Msa0085170:intron 45.0%
!! TTGCAGTGGTGTTTGGTGTT+TGG - chr1_2:65133622-65133641 None:intergenic 45.0%
GTGTGAGAGAAAAGTTGGAG+AGG - chr1_2:65134370-65134389 None:intergenic 45.0%
!! ATGAGTGTCGCTTTAGGCTT+TGG - chr1_2:65134496-65134515 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_2:65134506-65134525 Msa0085170:intron 45.0%
TGGGATTTGTGTGGTGAAGT+GGG - chr1_2:65134811-65134830 None:intergenic 45.0%
TTGGGATTTGTGTGGTGAAG+TGG - chr1_2:65134812-65134831 None:intergenic 45.0%
!!! AGGCCATTTTGGGATTTGTG+TGG - chr1_2:65134820-65134839 None:intergenic 45.0%
AACACAACAAGGCTTACACG+AGG + chr1_2:65135147-65135166 Msa0085170:intron 45.0%
ACCAACTGAGTTAAGCTCAC+GGG - chr1_2:65135244-65135263 None:intergenic 45.0%
TGTCAGCCTAAGAGTAAGTG+AGG - chr1_2:65135361-65135380 None:intergenic 45.0%
TTGATGTGGACAGGTTGCAT+AGG + chr1_2:65135627-65135646 Msa0085170:intron 45.0%
GCAAGGAAATCTGAGCAATG+TGG + chr1_2:65135847-65135866 Msa0085170:intron 45.0%
CATCCAACAACCTGGTAATC+TGG + chr1_2:65135987-65136006 Msa0085170:intron 45.0%
TGTCCAGATTACCAGGTTGT+TGG - chr1_2:65135993-65136012 None:intergenic 45.0%
ACCTGGTAATCTGGACAATG+TGG + chr1_2:65135996-65136015 Msa0085170:intron 45.0%
TCCACATTGTCCAGATTACC+AGG - chr1_2:65136000-65136019 None:intergenic 45.0%
TCCTCCATCTAGCTGAATCA+CGG - chr1_2:65136230-65136249 None:intergenic 45.0%
GTTAACGGCGGTGCAAATAT+AGG + chr1_2:65136317-65136336 Msa0085170:intron 45.0%
!! CATTTTGTTTGGGAAGTCGG+GGG - chr1_2:65136384-65136403 None:intergenic 45.0%
! TAGAGGTGTAACTAAGAGGG+GGG + chr1_2:65136578-65136597 Msa0085170:intron 45.0%
! TTGATGGATGATTGCGCATG+GGG - chr1_2:65136673-65136692 None:intergenic 45.0%
! GTTGATGGATGATTGCGCAT+GGG - chr1_2:65136674-65136693 None:intergenic 45.0%
! TGTTGATGGATGATTGCGCA+TGG - chr1_2:65136675-65136694 None:intergenic 45.0%
!! GATGCTACAAGTACTGGAAG+AGG - chr1_2:65136894-65136913 None:intergenic 45.0%
ATCGAGGATGCTACAAGTAC+TGG - chr1_2:65136900-65136919 None:intergenic 45.0%
!! CTCAACACTTAAGTTGGTGG+TGG - chr1_2:65137594-65137613 None:intergenic 45.0%
CAAAATTGGCAGACCATGTG+TGG - chr1_2:65137834-65137853 None:intergenic 45.0%
! CACACATGGTCTGCCAATTT+TGG + chr1_2:65137832-65137851 Msa0085170:intron 45.0%
TGCACATGCTGCACAATTGT+TGG + chr1_2:65137858-65137877 Msa0085170:intron 45.0%
GCACATGCTGCACAATTGTT+GGG + chr1_2:65137859-65137878 Msa0085170:intron 45.0%
!!! CTTTTTTGGCCAAGGCCTAA+TGG - chr1_2:65138232-65138251 None:intergenic 45.0%
GGATGAAATCTAAACCCTGG+AGG - chr1_2:65138375-65138394 None:intergenic 45.0%
TTTCCAAAATCCAGCAGCAG+TGG - chr1_2:65138770-65138789 None:intergenic 45.0%
!! GCTGGATTTTGGAAAGCTAC+TGG + chr1_2:65138775-65138794 Msa0085170:CDS 45.0%
TCATAACCTGGCCTATGACT+TGG - chr1_2:65139545-65139564 None:intergenic 45.0%
ATAGGCCAGGTTATGAACCA+TGG + chr1_2:65139549-65139568 Msa0085170:CDS 45.0%
! CTTCAGCTGCAGGATTTTGA+AGG - chr1_2:65139679-65139698 None:intergenic 45.0%
CTTCAAAATCCTGCAGCTGA+AGG + chr1_2:65139677-65139696 Msa0085170:CDS 45.0%
AAACTTGTACCTTCAGCTGC+AGG - chr1_2:65139689-65139708 None:intergenic 45.0%
!!! TATTTTTTAAAAAATCTTAT+TGG + chr1_2:65130808-65130827 Msa0085170:intron 5.0%
!!! ATTTTTATTTATTTTTTGAA+AGG + chr1_2:65133873-65133892 Msa0085170:intron 5.0%
CCAGTGATATTCCACCAGAG+TGG - chr1_2:65128476-65128495 None:intergenic 50.0%
CCACTCTGGTGGAATATCAC+TGG + chr1_2:65128473-65128492 Msa0085170:CDS 50.0%
GGTGGAATATCACTGGATCC+TGG + chr1_2:65128480-65128499 Msa0085170:CDS 50.0%
ATCTAGTGGTGTGGTCCAAG+TGG + chr1_2:65129116-65129135 Msa0085170:intron 50.0%
! TACCTAAGGTGTCCACCACT+TGG - chr1_2:65129134-65129153 None:intergenic 50.0%
!! AAGTGGTGGACACCTTAGGT+AGG + chr1_2:65129133-65129152 Msa0085170:intron 50.0%
!! AGTGGTGGACACCTTAGGTA+GGG + chr1_2:65129134-65129153 Msa0085170:intron 50.0%
!! ACTTTTGGAGGGCCTACTGT+GGG - chr1_2:65131949-65131968 None:intergenic 50.0%
!! AACTTTTGGAGGGCCTACTG+TGG - chr1_2:65131950-65131969 None:intergenic 50.0%
GGCTGTTGGGTGAATTGTGA+AGG - chr1_2:65132679-65132698 None:intergenic 50.0%
GAAGAGTAGTGATCGCAAGC+CGG - chr1_2:65134228-65134247 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+GGG - chr1_2:65135243-65135262 None:intergenic 50.0%
! AAGGTCTAGGGTTCGAACCT+TGG + chr1_2:65135286-65135305 Msa0085170:intron 50.0%
! AGGTCTAGGGTTCGAACCTT+GGG + chr1_2:65135287-65135306 Msa0085170:intron 50.0%
AGAGCCGTGATTCAGCTAGA+TGG + chr1_2:65136223-65136242 Msa0085170:intron 50.0%
GGGAGCAACTAGAGGTTAGT+GGG - chr1_2:65136355-65136374 None:intergenic 50.0%
CACTAACCTCTAGTTGCTCC+CGG + chr1_2:65136354-65136373 Msa0085170:intron 50.0%
! AGAGGTGTAACTAAGAGGGG+GGG + chr1_2:65136579-65136598 Msa0085170:intron 50.0%
TGGGGTGGCAGATAGATAGA+TGG - chr1_2:65136655-65136674 None:intergenic 50.0%
TGTGTGTGAGAGAGAGAGAG+GGG - chr1_2:65136854-65136873 None:intergenic 50.0%
GTGTGTGTGAGAGAGAGAGA+GGG - chr1_2:65136855-65136874 None:intergenic 50.0%
TGTGTGTGTGAGAGAGAGAG+AGG - chr1_2:65136856-65136875 None:intergenic 50.0%
! CTAATGGTGGGATCCACACA+TGG + chr1_2:65137818-65137837 Msa0085170:intron 50.0%
ATGGAATCATGTGTGCCTCC+AGG + chr1_2:65138357-65138376 Msa0085170:CDS 50.0%
TGGAATCATGTGTGCCTCCA+GGG + chr1_2:65138358-65138377 Msa0085170:CDS 50.0%
ACTAATAGAGCCACTGCTGC+TGG + chr1_2:65138757-65138776 Msa0085170:CDS 50.0%
TTCTGAACATGGTCCTCCAC+AGG + chr1_2:65138924-65138943 Msa0085170:CDS 50.0%
!! AAGAAGGATGGGTTGTGTGC+AGG + chr1_2:65139501-65139520 Msa0085170:CDS 50.0%
!! AGAAGGATGGGTTGTGTGCA+GGG + chr1_2:65139502-65139521 Msa0085170:CDS 50.0%
TAGTGGTGTGGTCCAAGTGG+TGG + chr1_2:65129119-65129138 Msa0085170:intron 55.0%
!! GTCCAAGTGGTGGACACCTT+AGG + chr1_2:65129129-65129148 Msa0085170:intron 55.0%
!! CTTTTGGAGGGCCTACTGTG+GGG - chr1_2:65131948-65131967 None:intergenic 55.0%
CCCCGTGAGCTTAACTCAGT+TGG + chr1_2:65135240-65135259 Msa0085170:intron 55.0%
GGACAGGTTGCATAGGTTCC+AGG + chr1_2:65135634-65135653 Msa0085170:intron 55.0%
CACCCACTTCACGCTGATGT+GGG + chr1_2:65135870-65135889 Msa0085170:intron 55.0%
GACCCACATCAGCGTGAAGT+GGG - chr1_2:65135875-65135894 None:intergenic 55.0%
GCCGTGATTCAGCTAGATGG+AGG + chr1_2:65136226-65136245 Msa0085170:intron 55.0%
GCTAGATGGAGGAGAGCTAG+TGG + chr1_2:65136237-65136256 Msa0085170:intron 55.0%
CGGGAGCAACTAGAGGTTAG+TGG - chr1_2:65136356-65136375 None:intergenic 55.0%
ATGGATGATTGCGCATGGGG+TGG - chr1_2:65136670-65136689 None:intergenic 55.0%
GGTGGAGAAAGACCTTCCTG+TGG - chr1_2:65137576-65137595 None:intergenic 55.0%
! GAGCCACTGCTGCTGGATTT+TGG + chr1_2:65138764-65138783 Msa0085170:CDS 55.0%
TACAAGGGACGTGCCCCAAA+TGG + chr1_2:65138859-65138878 Msa0085170:CDS 55.0%
! CCTGGCCTATGACTTGGACT+TGG - chr1_2:65139539-65139558 None:intergenic 55.0%
CCAAGTCCAAGTCATAGGCC+AGG + chr1_2:65139536-65139555 Msa0085170:CDS 55.0%
AATGGTGACCTGACGGCACC+AGG - chr1_2:65128501-65128520 None:intergenic 60.0%
GCACCCACTTCACGCTGATG+TGG + chr1_2:65135869-65135888 Msa0085170:intron 60.0%
GGACCCACATCAGCGTGAAG+TGG - chr1_2:65135876-65135895 None:intergenic 60.0%
GGTGTAACTAAGAGGGGGGG+TGG + chr1_2:65136582-65136601 Msa0085170:intron 60.0%
AGGGACGTGCCCCAAATGGA+AGG + chr1_2:65138863-65138882 Msa0085170:CDS 60.0%
!! CACTGGATCCTGGTGCCGTC+AGG + chr1_2:65128490-65128509 Msa0085170:CDS 65.0%
!! GGAGCGCCGGGAGCAACTAG+AGG - chr1_2:65136363-65136382 None:intergenic 70.0%
! TTGGGAAGTCGGGGGAGCGC+CGG - chr1_2:65136376-65136395 None:intergenic 70.0%
GGGGGGGTGGCGTGAAAGCT+CGG + chr1_2:65136595-65136614 Msa0085170:intron 70.0%
!! TGGGAAGTCGGGGGAGCGCC+GGG - chr1_2:65136375-65136394 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 65128431 65140084 65128431 ID=Msa0085170;Name=Msa0085170
chr1_2 mRNA 65128431 65140084 65128431 ID=Msa0085170-mRNA-1;Parent=Msa0085170;Name=Msa0085170-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.75|1|1|4|0|370
chr1_2 exon 65128431 65128511 65128431 ID=Msa0085170-mRNA-1:exon:21968;Parent=Msa0085170-mRNA-1
chr1_2 exon 65138336 65138510 65138336 ID=Msa0085170-mRNA-1:exon:21969;Parent=Msa0085170-mRNA-1
chr1_2 exon 65138674 65138945 65138674 ID=Msa0085170-mRNA-1:exon:21970;Parent=Msa0085170-mRNA-1
chr1_2 exon 65139500 65140084 65139500 ID=Msa0085170-mRNA-1:exon:21971;Parent=Msa0085170-mRNA-1
chr1_2 CDS 65128431 65128511 65128431 ID=Msa0085170-mRNA-1:cds;Parent=Msa0085170-mRNA-1
chr1_2 CDS 65138336 65138510 65138336 ID=Msa0085170-mRNA-1:cds;Parent=Msa0085170-mRNA-1
chr1_2 CDS 65138674 65138945 65138674 ID=Msa0085170-mRNA-1:cds;Parent=Msa0085170-mRNA-1
chr1_2 CDS 65139500 65140084 65139500 ID=Msa0085170-mRNA-1:cds;Parent=Msa0085170-mRNA-1
Gene Sequence

>Msa0085170

ATGGAGTTGAAGGCAGGATTATATTGCAAGTTCCTATTAAGACCACTCTGGTGGAATATCACTGGATCCTGGTGCCGTCAGGAGAGATCATCATCAATGGATATGGAATCATGTGTGCCTCCAGGGTTTAGATTTCATCCAACAGAAGAAGAACTTGTAGGGTATTACCTCAACAGGAAGATTAACTCACTCAAAATTGATCTAGATGTTATTGTTGAGGTTGATCTCTACAAAATTGAACCATGGGACATTCAAGATAGATGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGCCACAAAGATAAGAAATATCCTACAGGAACAAGAACTAATAGAGCCACTGCTGCTGGATTTTGGAAAGCTACTGGAAGGGATAAAGCTGTGACTTCCAAAAACAGAATAATAGGAATGAGGAAGACACTTGTCTTTTACAAGGGACGTGCCCCAAATGGAAGGAAAACTGATTGGATCATGCATGAATATAGACATCAAACTTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCAGGGCATTTAAAAAGCCAAGTCCAAGTCATAGGCCAGGTTATGAACCATGGTATAGTAATCAACAACAACCACAGTATTTCAGATCAGATGATCAAAGCTATGCAACTACAAGACCTTTATCAATTACAGATATTTTGCATGAAAATCGTTTACTCCTTCAAAATCCTGCAGCTGAAGGTACAAGTTTTAGTAACCCCTTTAGCAACGATCAACAGTTTCTATCAAACCAAAATACTCTTGTTATGGACAACAAACAACTCATTGAACTTCCACAGTTAGATAGTCCAACAACAAGTTTTGCAATGAAAGAAAGTACTCATCACAATGGACTCACAATTGAAGAATATTGCAGTGAAGAAAGGAGCATTAATAATAATAACAATGGACAAGTAATTGATTGGAAAAGCTTGGACAATTTGTTCAGTTCAAATCAATTTACAGATACAGCTAATTACTTTTCAAATCAAAATAGCATGCCATTGATGATACCTCATAGTCAACATGAGCTACAATCTCATCAAAATCAAGCTAATCATATCTTAGGATGCTTTCCTGATTCATAA
Protein sequence

>Msa0085170

MELKAGLYCKFLLRPLWWNITGSWCRQERSSSMDMESCVPPGFRFHPTEEELVGYYLNRKINSLKIDLDVIVEVDLYKIEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVTSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFKKPSPSHRPGYEPWYSNQQQPQYFRSDDQSYATTRPLSITDILHENRLLLQNPAAEGTSFSNPFSNDQQFLSNQNTLVMDNKQLIELPQLDSPTTSFAMKESTHHNGLTIEEYCSEERSINNNNNGQVIDWKSLDNLFSSNQFTDTANYFSNQNSMPLMIPHSQHELQSHQNQANHILGCFPDS*