AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0087700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087700 MtrunA17_Chr1g0204621 94.431 1652 35 3 1 1610 1 1637 0.0 3132
Msa0087700 MtrunA17_Chr3g0132771 32.517 286 143 14 329 566 2600 2883 2.95e-25 115
Msa0087700 MtrunA17_Chr7g0246241 32.812 256 144 10 306 534 2193 2447 1.84e-24 112
Msa0087700 MtrunA17_Chr1g0185101 33.473 239 121 10 328 533 2996 3229 2.09e-22 105
Msa0087700 MtrunA17_Chr8g0351371 43.678 87 39 2 458 534 71 157 3.36e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087700 AT5G18525.1 55.123 1669 646 23 7 1610 9 1639 0.0 1778
Msa0087700 AT2G45540.1 34.363 259 136 10 306 534 2211 2465 1.07e-25 117
Msa0087700 AT2G45540.3 34.363 259 136 10 306 534 2211 2465 1.07e-25 117
Msa0087700 AT2G45540.6 34.363 259 136 10 306 534 2211 2465 1.07e-25 117
Msa0087700 AT2G45540.5 34.363 259 136 10 306 534 2211 2465 1.07e-25 117
Msa0087700 AT2G45540.4 34.363 259 136 10 306 534 2211 2465 1.07e-25 117
Msa0087700 AT2G45540.2 34.363 259 136 10 306 534 2266 2520 1.09e-25 117
Msa0087700 AT1G58230.3 35.470 234 121 10 328 533 1744 1975 1.55e-23 109
Msa0087700 AT1G58230.2 35.470 234 121 10 328 533 1950 2181 1.76e-23 109
Msa0087700 AT1G58230.1 35.470 234 121 10 328 533 1950 2181 1.82e-23 109
Msa0087700 AT4G02660.3 30.132 302 147 13 328 567 2910 3209 2.20e-22 106
Msa0087700 AT4G02660.1 30.132 302 147 13 328 567 2910 3209 2.20e-22 106
Msa0087700 AT4G02660.2 30.132 302 147 13 328 567 2959 3258 2.24e-22 106
Msa0087700 AT1G03060.4 33.891 239 120 10 328 533 2937 3170 4.58e-22 105
Msa0087700 AT1G03060.3 33.891 239 120 10 328 533 2936 3169 4.66e-22 105
Msa0087700 AT1G03060.2 33.891 239 120 10 328 533 2965 3198 4.99e-22 105
Msa0087700 AT1G03060.1 33.891 239 120 10 328 533 2966 3199 5.12e-22 105

Find 386 sgRNAs with CRISPR-Local

Find 645 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGAATTTCCTTAGTTTAAT+TGG 0.088788 1_2:+68642189 Msa0087700:CDS
AACTAAAATTACCTGATTTA+TGG 0.109916 1_2:-68644740 None:intergenic
TTCTCTCGATTGTTTCTTAT+TGG 0.112270 1_2:+68649607 Msa0087700:CDS
GTGACGGAACAATTCATATT+TGG 0.120579 1_2:+68647675 Msa0087700:CDS
CAGAAGAAACATAGAGTTTC+TGG 0.146902 1_2:-68649534 None:intergenic
CTCGCTGCATTTCATTTGTT+TGG 0.150240 1_2:-68643424 None:intergenic
TTACAGAAATGAATATATTT+TGG 0.176964 1_2:+68641867 Msa0087700:intron
ATTACCTGATTTATGGTAAT+TGG 0.181224 1_2:-68644733 None:intergenic
TGGGATGGGCCTGCATTTCT+TGG 0.203494 1_2:+68646835 Msa0087700:CDS
ACCTTGTTTGCATCTCTTCT+TGG 0.209573 1_2:+68646322 Msa0087700:CDS
GTACAAATGAATCTTGTAAA+AGG 0.211141 1_2:-68644564 None:intergenic
CCAGCAAAGTTGTTGCTTAA+TGG 0.216421 1_2:+68646649 Msa0087700:CDS
TGCCCCTTGTTCACTGCTTT+GGG 0.216873 1_2:+68644872 Msa0087700:CDS
CTCTATGTTTCTTCTGATAA+TGG 0.221236 1_2:+68649541 Msa0087700:CDS
TTATTGTACTTGCATGGTTT+AGG 0.223490 1_2:+68642420 Msa0087700:CDS
CTGATTTGGCTATACCTTCT+TGG 0.224939 1_2:+68643126 Msa0087700:CDS
TTGACAGAGTATTTAAATTA+AGG 0.232036 1_2:-68647811 None:intergenic
ATTCATTTGTACGCGAAATA+TGG 0.233144 1_2:+68644575 Msa0087700:CDS
TTGCCCCTTGTTCACTGCTT+TGG 0.235135 1_2:+68644871 Msa0087700:CDS
TATTGTACTTGCATGGTTTA+GGG 0.235204 1_2:+68642421 Msa0087700:CDS
AACTGTCTGTCCGGCTATTA+TGG 0.238330 1_2:+68647042 Msa0087700:CDS
TATGGTCATGGATTAGATTA+TGG 0.250576 1_2:+68642493 Msa0087700:CDS
TCAAACAGTTCTTTAAGTTT+TGG 0.260886 1_2:-68645928 None:intergenic
GTGATGCATTGGAAAGTAAT+AGG 0.263069 1_2:+68643183 Msa0087700:CDS
CAGCAAAGTTGTTGCTTAAT+GGG 0.264127 1_2:+68646650 Msa0087700:CDS
TCCCTAGTCCAGCCACCATC+TGG 0.268119 1_2:+68646815 Msa0087700:CDS
CTAGAATGCCAATCAATTAA+TGG 0.270988 1_2:-68642645 None:intergenic
TCTGCTTCGGTGCTACTAAT+TGG 0.273916 1_2:+68644688 Msa0087700:CDS
AATATCCAGTTTCTCCATTT+GGG 0.274767 1_2:+68648837 Msa0087700:CDS
AGGTGAATCCAGAAGAATTT+TGG 0.277617 1_2:-68644100 None:intergenic
ATGCTCTGTTGTTCTCCTTT+TGG 0.282438 1_2:+68649666 Msa0087700:three_prime_UTR
CTGGCAGTGGCGTGGCGAAT+AGG 0.287893 1_2:-68643359 None:intergenic
TGAATGACCTCTGAAAATAA+TGG 0.296594 1_2:-68648809 None:intergenic
GATCCATGCGACTCTCAATT+TGG 0.297384 1_2:-68646041 None:intergenic
TAGCATCTGTTTAACAATAA+AGG 0.302902 1_2:-68645055 None:intergenic
AACTTCTACGCCGTCATAAC+TGG 0.310104 1_2:+68646395 Msa0087700:CDS
TCAACAACCCAAGGCATTAC+TGG 0.310646 1_2:-68642765 None:intergenic
GATACCTCATCCAATCCTTT+TGG 0.310938 1_2:-68643946 None:intergenic
GTTGCTGCTAATACTCTCTT+TGG 0.315527 1_2:+68645859 Msa0087700:CDS
CCATTAAGCAACAACTTTGC+TGG 0.319943 1_2:-68646649 None:intergenic
TCGCTGCATTTCATTTGTTT+GGG 0.321401 1_2:-68643423 None:intergenic
TGACCCATTACGTGTTATTC+TGG 0.327158 1_2:-68643378 None:intergenic
ATTGCAACTGCACAAAGTTC+TGG 0.329370 1_2:+68648181 Msa0087700:CDS
AATACAACTTGTAATCATTC+TGG 0.330306 1_2:+68641991 Msa0087700:CDS
TATGGAAATTACTGTGCTTC+AGG 0.331727 1_2:+68645378 Msa0087700:CDS
CATATTTGGGATAGTCAAAC+AGG 0.332877 1_2:+68647689 Msa0087700:CDS
GTGGAAATGTCGTTGCTTCT+TGG 0.334153 1_2:+68648230 Msa0087700:CDS
GATTGTATGATGACTTTAGA+TGG 0.336441 1_2:+68645171 Msa0087700:CDS
GGGCTTTGGTGAGCTTTAAA+TGG 0.338255 1_2:-68646736 None:intergenic
TGACGGAACAATTCATATTT+GGG 0.338642 1_2:+68647676 Msa0087700:CDS
ATTCCTTCTTGCATTACTAC+TGG 0.339420 1_2:-68646757 None:intergenic
CTTGTAGTTGGCACTGGAAA+TGG 0.341118 1_2:+68647905 Msa0087700:CDS
CAATCAGACTTTAATGCGTT+GGG 0.341660 1_2:-68642360 None:intergenic
AGCTTTCTCCATTAATTGAT+TGG 0.341906 1_2:+68642637 Msa0087700:CDS
AAACTGGAAAACCTTTGTTT+AGG 0.343747 1_2:+68641968 Msa0087700:CDS
AAAGAAGCCCAATCCTATTC+CGG 0.344168 1_2:-68648882 None:intergenic
CCTTGTTTGCATCTCTTCTT+GGG 0.344823 1_2:+68646323 Msa0087700:CDS
TGAACCATGAACCATGGTTT+TGG 0.344846 1_2:+68646791 Msa0087700:CDS
GCCATCGGCCAAAATTCTTC+TGG 0.345535 1_2:+68644092 Msa0087700:CDS
ATGGGCCTGCATTTCTTGGC+CGG 0.346611 1_2:+68646839 Msa0087700:CDS
ACCGTTTATACTGCGGGAAT+TGG 0.346940 1_2:+68646973 Msa0087700:CDS
TTGGCCCCAAATGGAGAAAC+TGG 0.347247 1_2:-68648842 None:intergenic
GAATATCCAGTTTCTCCATT+TGG 0.347841 1_2:+68648836 Msa0087700:CDS
TTATTTCAATTTCCCGGAAT+AGG 0.349725 1_2:+68648869 Msa0087700:CDS
ATTTCTGCTGTATGTTCCTC+TGG 0.351729 1_2:+68648112 Msa0087700:CDS
GAGGTCTCTGGCTGTTCATC+AGG 0.353053 1_2:+68646942 Msa0087700:CDS
TGATTTGGCTATACCTTCTT+GGG 0.355588 1_2:+68643127 Msa0087700:CDS
TCGAACCTTTAGAAATTTCC+TGG 0.356044 1_2:-68645966 None:intergenic
GTTGCTAATGATTTCCTGTT+CGG 0.359120 1_2:+68642096 Msa0087700:CDS
AAGGAAGAACATCTCATCTC+TGG 0.359645 1_2:+68643562 Msa0087700:CDS
GCTATTTGATTCAATCTCAT+TGG 0.359700 1_2:+68643841 Msa0087700:CDS
TTCATATTCTATACTTCAAC+AGG 0.361028 1_2:+68642074 Msa0087700:CDS
CGAATTTCCTTAGTTTAATT+GGG 0.363067 1_2:+68642190 Msa0087700:CDS
GATATCCAGACTTGCTTCTC+TGG 0.363689 1_2:+68643720 Msa0087700:CDS
TAACAGTTCCTTTATATCCT+TGG 0.367371 1_2:-68646996 None:intergenic
CACTGGATAGATATAATCTT+TGG 0.369654 1_2:+68643224 Msa0087700:CDS
TTATCTGATGAGTCTGAAAC+TGG 0.371740 1_2:+68641952 Msa0087700:CDS
ATTGAGGAAGGATATTCATT+AGG 0.372237 1_2:-68643014 None:intergenic
TGGCAGTGGCGTGGCGAATA+GGG 0.375349 1_2:-68643358 None:intergenic
CCAATGGGTGAATAGTTTCC+AGG 0.380731 1_2:-68644621 None:intergenic
CTTGCATTACTACTGGGCTT+TGG 0.382921 1_2:-68646750 None:intergenic
GGCCCATCCCAGATGGTGGC+TGG 0.384708 1_2:-68646823 None:intergenic
ACAGATGCATACAAGTATAA+AGG 0.385887 1_2:-68647865 None:intergenic
TGGACAGAACTTTACGAGTC+TGG 0.386329 1_2:+68648400 Msa0087700:CDS
AATTTAAATACTCTGTCAAA+TGG 0.386746 1_2:+68647815 Msa0087700:CDS
TAAACCATGCAAGTACAATA+AGG 0.387084 1_2:-68642418 None:intergenic
AAGATGTTATTTCAATTTCC+CGG 0.389458 1_2:+68648863 Msa0087700:CDS
GTGAATCCCTGGGCAATTGC+AGG 0.394046 1_2:-68646613 None:intergenic
TTGCTAATGATTTCCTGTTC+GGG 0.394942 1_2:+68642097 Msa0087700:CDS
ATCAAACTTGTATATTTCTC+CGG 0.395281 1_2:+68644648 Msa0087700:CDS
CTTGTTCACTGCTTTGGGAA+AGG 0.395416 1_2:+68644877 Msa0087700:CDS
CGAGTCAGTCAACATGATAT+TGG 0.395785 1_2:-68642469 None:intergenic
TCATTTGACTTAATGGGTAA+TGG 0.400990 1_2:-68643538 None:intergenic
AGGGATTTCAGACGTTGAAT+AGG 0.400999 1_2:-68642886 None:intergenic
AATTGCGTATCTACAAGAAT+TGG 0.401634 1_2:+68643466 Msa0087700:CDS
TATGTTGAAGAAAAGATATA+TGG 0.403090 1_2:-68643670 None:intergenic
CACAGGTTATTTACATTTGA+AGG 0.403308 1_2:+68644537 Msa0087700:CDS
TGCTGCAAATCTTGCAAAGC+AGG 0.404201 1_2:+68644206 Msa0087700:CDS
ACATAAGTTGCATACACGTT+GGG 0.405606 1_2:+68645338 Msa0087700:CDS
GGTTCTTATGCAGAAACATA+TGG 0.406085 1_2:+68645360 Msa0087700:CDS
TCTGCTTATTTCCAGCTCTC+TGG 0.406195 1_2:+68648380 Msa0087700:CDS
TCCCAGATGGTGGCTGGACT+AGG 0.406304 1_2:-68646817 None:intergenic
TGCCTCCAGAGAAGCAAGTC+TGG 0.407092 1_2:-68643725 None:intergenic
ATTTGTTTGGGTCAAAACTT+TGG 0.409733 1_2:-68643411 None:intergenic
TTCGTTGAAGGGAAAGCATC+TGG 0.410645 1_2:+68642156 Msa0087700:CDS
TTTCTTATTGGAACAGAAGA+TGG 0.412926 1_2:+68649619 Msa0087700:CDS
CAATTTCCCGGAATAGGATT+GGG 0.413685 1_2:+68648875 Msa0087700:CDS
GCAAGTACAGGAGCTATGTT+TGG 0.414434 1_2:-68642258 None:intergenic
TCACTTGATCTCTTCGTTGA+AGG 0.415634 1_2:+68642144 Msa0087700:CDS
GCAGGGAGCTCTCAGGCAAA+TGG 0.416099 1_2:+68644224 Msa0087700:CDS
GAATGACCTCTGAAAATAAT+GGG 0.416618 1_2:-68648808 None:intergenic
CTCCAACTCTGGACAGGATC+AGG 0.417573 1_2:-68645132 None:intergenic
ACATGATGGTATGGCTGATT+TGG 0.420155 1_2:+68643112 Msa0087700:CDS
GGAATTGGCCAAGGATATAA+AGG 0.420460 1_2:+68646988 Msa0087700:CDS
CCTCTACTTCCCTGGGATTG+TGG 0.420691 1_2:-68646688 None:intergenic
TCTAAGTTGTATTGAGTCTT+CGG 0.421276 1_2:-68642318 None:intergenic
TCCGAAAGGAAAAGGAGAAT+TGG 0.421509 1_2:-68641387 None:intergenic
TGCAATTTAATGAAATCCTC+AGG 0.422535 1_2:-68643158 None:intergenic
CATTTCATCCAGTAATGCCT+TGG 0.425675 1_2:+68642757 Msa0087700:CDS
TCCACAATGCCAAGATCAAC+AGG 0.426123 1_2:+68643308 Msa0087700:CDS
TCAATTTCCCGGAATAGGAT+TGG 0.426272 1_2:+68648874 Msa0087700:CDS
GATCTTCAGTTAACCCGAAC+AGG 0.431915 1_2:-68642110 None:intergenic
AAGAAGCCCAATCCTATTCC+GGG 0.432466 1_2:-68648881 None:intergenic
ATGGAACCGAGTTGGTAAAC+AGG 0.433069 1_2:+68644594 Msa0087700:CDS
TCATGTTGACTGACTCGTTA+TGG 0.435544 1_2:+68642475 Msa0087700:CDS
TTAAAACTTTAGCTATTGCT+AGG 0.436246 1_2:-68649886 None:intergenic
GCCAATTCCCGCAGTATAAA+CGG 0.439195 1_2:-68646974 None:intergenic
AGATGAATGTCTGTCTGAAT+TGG 0.441189 1_2:+68642920 Msa0087700:CDS
CTCATCTTAAACAGATTAGC+AGG 0.441360 1_2:+68642714 Msa0087700:CDS
GCTGAGTCAGAAACGGAATC+TGG 0.442326 1_2:+68647731 Msa0087700:CDS
AATCTCATTGGAAATATACT+TGG 0.443666 1_2:+68643853 Msa0087700:CDS
TTCTCCCAGGAAATTTCTAA+AGG 0.444280 1_2:+68645961 Msa0087700:CDS
GGGAAAGGACTATGTGTAGA+TGG 0.445946 1_2:+68644892 Msa0087700:CDS
GGAACCAAAACCATGGTTCA+TGG 0.449680 1_2:-68646795 None:intergenic
TGTACCAATTACCATAAATC+AGG 0.449684 1_2:+68644729 Msa0087700:CDS
TGGGCCTGCATTTCTTGGCC+GGG 0.451407 1_2:+68646840 Msa0087700:CDS
CCAACGCATTAAAGTCTGAT+TGG 0.451413 1_2:+68642361 Msa0087700:CDS
ATCTTTGGCTACAAAATGTC+TGG 0.453989 1_2:+68643239 Msa0087700:CDS
AACTCTGGAATGCATTCATC+AGG 0.456200 1_2:-68643059 None:intergenic
GATGTCAGTGATGGTGGAAA+TGG 0.456665 1_2:+68641922 Msa0087700:CDS
ATTTCATCCAGTAATGCCTT+GGG 0.457041 1_2:+68642758 Msa0087700:CDS
GCTAAATTAGATTCCAGTAC+AGG 0.459326 1_2:-68642522 None:intergenic
TGACGACGTCCTGTTGATCT+TGG 0.459901 1_2:-68643317 None:intergenic
AGTCCAGCCACCATCTGGGA+TGG 0.460110 1_2:+68646820 Msa0087700:CDS
ACCCATTAAGTCAAATGAAA+AGG 0.462974 1_2:+68643543 Msa0087700:CDS
GAACGTTATGCTTACTCAAT+CGG 0.463348 1_2:+68643283 Msa0087700:CDS
ATTTAAATACTCTGTCAAAT+GGG 0.463732 1_2:+68647816 Msa0087700:CDS
GGGAAATTGAAATAACATCT+TGG 0.464235 1_2:-68648861 None:intergenic
TTTGGAATTTGTCAGCGGAT+TGG 0.464950 1_2:+68645877 Msa0087700:CDS
GACTTTCCGACGCAAGCAAT+CGG 0.465248 1_2:-68642051 None:intergenic
AGCAAATGGCGCTTGGCAAA+AGG 0.468397 1_2:+68642843 Msa0087700:CDS
CCTGCATTTCTTGGCCGGGT+GGG 0.468647 1_2:+68646844 Msa0087700:CDS
TTTGGCACCTCTACTTCCCT+GGG 0.469185 1_2:-68646695 None:intergenic
ATAAGAAACAATCGAGAGAA+AGG 0.469705 1_2:-68649604 None:intergenic
CTCGCAACATTCACTATAAG+TGG 0.470617 1_2:-68644285 None:intergenic
CCAGATGATAATTGTGATGT+AGG 0.470654 1_2:+68642801 Msa0087700:CDS
ATTATGGAATGAACCTGTAC+TGG 0.470689 1_2:+68642509 Msa0087700:CDS
GGAAATAAGCAGATGTTCCT+CGG 0.470759 1_2:-68648370 None:intergenic
AATAACATCTTGGCCCCAAA+TGG 0.471290 1_2:-68648851 None:intergenic
CCTACATCACAATTATCATC+TGG 0.471330 1_2:-68642801 None:intergenic
GCAGAGGATCCGAAAGGAAA+AGG 0.473155 1_2:-68641395 None:intergenic
TCATGGAGCAGTGAGGTCTC+TGG 0.473226 1_2:+68646930 Msa0087700:CDS
CCAATCAGACTTTAATGCGT+TGG 0.473878 1_2:-68642361 None:intergenic
CTGCCAGAATAACACGTAAT+GGG 0.474049 1_2:+68643375 Msa0087700:CDS
TTAAATTAAGGACATTTGCC+TGG 0.474885 1_2:-68647799 None:intergenic
TACAAATGAATCTTGTAAAA+GGG 0.474924 1_2:-68644563 None:intergenic
TGATGCATTGGAAAGTAATA+GGG 0.476289 1_2:+68643184 Msa0087700:CDS
GGTAGTTCCTGCAGAAATCC+TGG 0.477274 1_2:-68643890 None:intergenic
TAAATTGCATCGTGATGCAT+TGG 0.477850 1_2:+68643172 Msa0087700:CDS
TAAAGTTCTGTCCAGAGAGC+TGG 0.478965 1_2:-68648391 None:intergenic
CACTTGATCTCTTCGTTGAA+GGG 0.479810 1_2:+68642145 Msa0087700:CDS
GAGACTTAAGCAAGAGCAAA+TGG 0.480077 1_2:+68642829 Msa0087700:CDS
GTCCAGCCACCATCTGGGAT+GGG 0.480291 1_2:+68646821 Msa0087700:CDS
AAATTCAGCTGCATCTGCTT+CGG 0.481864 1_2:+68644675 Msa0087700:CDS
ATAAAGGAACTGTTATGAAG+TGG 0.482962 1_2:+68647004 Msa0087700:CDS
CCCTAGTCCAGCCACCATCT+GGG 0.483111 1_2:+68646816 Msa0087700:CDS
ATGAATTACCATCTTCCAAA+AGG 0.484499 1_2:-68649681 None:intergenic
CCCACCCGGCCAAGAAATGC+AGG 0.485323 1_2:-68646844 None:intergenic
CTCATTGGAAATATACTTGG+AGG 0.485424 1_2:+68643856 Msa0087700:CDS
TAGGTCCGTACATGATGGTA+TGG 0.486037 1_2:+68643103 Msa0087700:CDS
GTGCTAAAGAACTCCAACTC+TGG 0.486676 1_2:-68645143 None:intergenic
GAGGTCAAAAGCTTCATATC+TGG 0.486738 1_2:+68648053 Msa0087700:CDS
CAATGCAGAGGCTCTATCAA+TGG 0.486759 1_2:+68643033 Msa0087700:CDS
AGCCGAACTAACTGTCTGTC+CGG 0.486871 1_2:+68647033 Msa0087700:CDS
CAGGGAGCTCTCAGGCAAAT+GGG 0.486881 1_2:+68644225 Msa0087700:CDS
CACAGATGCTGAATGGTTTG+TGG 0.488649 1_2:-68647759 None:intergenic
ATTGGTTCCAGTGAGGAGAT+TGG 0.489050 1_2:+68644706 Msa0087700:CDS
TGCTCCATGATGTGCGCGTA+TGG 0.489121 1_2:-68646917 None:intergenic
AGCCGGACAGACAGTTAGTT+CGG 0.489357 1_2:-68647035 None:intergenic
ATTGATGTGCTGGTCAGAAT+TGG 0.490419 1_2:+68644916 Msa0087700:CDS
TTCCTTCTTGCATTACTACT+GGG 0.490826 1_2:-68646756 None:intergenic
CTCCTCATGGCCATAATAGC+CGG 0.491742 1_2:-68647052 None:intergenic
AGTTGGTAAACAGGCATACC+TGG 0.493074 1_2:+68644603 Msa0087700:CDS
GTTTGGATGCCTCAAAGAGC+CGG 0.493426 1_2:-68642241 None:intergenic
TTAGTGAATGTCCCTGCGGT+TGG 0.494040 1_2:-68643590 None:intergenic
AGAAGAAACATAGAGTTTCT+GGG 0.494412 1_2:-68649533 None:intergenic
ACTGCCAGAATAACACGTAA+TGG 0.494873 1_2:+68643374 Msa0087700:CDS
GTCTAAATCTGCCATTGAAA+CGG 0.495872 1_2:+68648909 Msa0087700:CDS
GCCTCTTAGTGTTCTTCGAA+TGG 0.497207 1_2:+68642971 Msa0087700:CDS
AGTTTCAGACTCATCAGATA+AGG 0.498867 1_2:-68641950 None:intergenic
GCCATTCGAAGAACACTAAG+AGG 0.499591 1_2:-68642972 None:intergenic
AAGGACATTTGCCTGGTCAC+TGG 0.501293 1_2:-68647792 None:intergenic
GGCATTCTAGCTTTCATCAG+TGG 0.501714 1_2:+68642658 Msa0087700:CDS
CTTTCCCAAAGCAGTGAACA+AGG 0.504692 1_2:-68644876 None:intergenic
TTGCAAAGCAGGGAGCTCTC+AGG 0.504910 1_2:+68644217 Msa0087700:CDS
GAAACTCTTGTAGTTGGCAC+TGG 0.505468 1_2:+68647899 Msa0087700:CDS
AAGCATGCATCCAAAAGGAT+TGG 0.507335 1_2:+68643936 Msa0087700:CDS
ATGGTCAATTCCACAATCCC+AGG 0.509781 1_2:+68646678 Msa0087700:CDS
ACCATGGTTCATGGTTCACT+TGG 0.510637 1_2:-68646786 None:intergenic
GCCTGCATTTCTTGGCCGGG+TGG 0.511013 1_2:+68646843 Msa0087700:CDS
TGGCTACAAAATGTCTGGCC+AGG 0.513800 1_2:+68643244 Msa0087700:CDS
TCTTTAGCAACAAGCTGAAG+TGG 0.515434 1_2:-68644165 None:intergenic
CGAGTGATACTGAAGCTGAA+TGG 0.515855 1_2:+68644304 Msa0087700:CDS
AAGCAAGAGCAAATGGCGCT+TGG 0.516338 1_2:+68642836 Msa0087700:CDS
GCACTGGAAATGGTTCTCTC+AGG 0.516506 1_2:+68647915 Msa0087700:CDS
TTCGTCAATGTTGTGCTACA+TGG 0.517465 1_2:+68646356 Msa0087700:CDS
GACATCAAGATCATCACTCT+TGG 0.518513 1_2:-68641905 None:intergenic
TGTATTCAGATGTGAATCCC+TGG 0.519878 1_2:-68646624 None:intergenic
CCCAGATGGTGGCTGGACTA+GGG 0.520579 1_2:-68646816 None:intergenic
ACGGAAACCCAATTAAACTA+AGG 0.520654 1_2:-68642197 None:intergenic
AGATTACTAGTTCAGCAGAT+GGG 0.521262 1_2:+68641530 Msa0087700:intron
GCATTACTGGATGAAATGTA+TGG 0.521652 1_2:-68642752 None:intergenic
TACTCCATACGCGCACATCA+TGG 0.524252 1_2:+68646913 Msa0087700:CDS
CTCTGGTTCTAGCAAGGCGC+AGG 0.524791 1_2:+68648129 Msa0087700:CDS
CAAAAGCTTCATATCTGGAG+GGG 0.526049 1_2:+68648058 Msa0087700:CDS
TGAGAAGCATACCGTTTCAA+TGG 0.528104 1_2:-68648920 None:intergenic
GCTTCTTGGCGTGCTCATGA+TGG 0.528187 1_2:+68648244 Msa0087700:CDS
TAAAGGAACTGTTATGAAGT+GGG 0.528692 1_2:+68647005 Msa0087700:CDS
GGCAAAAGGTGATGAACAGT+TGG 0.529530 1_2:+68642857 Msa0087700:CDS
TACAAGTTTGATAAGACCAA+TGG 0.530373 1_2:-68644637 None:intergenic
AGCTTTCATCAGTGGTGGAA+AGG 0.530410 1_2:+68642666 Msa0087700:CDS
TGATGAGCTTGCTTTCTCCC+AGG 0.530569 1_2:+68645948 Msa0087700:CDS
GGTTCTAGCAAGGCGCAGGC+AGG 0.531561 1_2:+68648133 Msa0087700:CDS
ACAGATGCTGAATGGTTTGT+GGG 0.531946 1_2:-68647758 None:intergenic
ATTACGTGTTATTCTGGCAG+TGG 0.531949 1_2:-68643372 None:intergenic
TGTCATTTCAACTACATCAC+TGG 0.532522 1_2:+68643207 Msa0087700:CDS
AGGAAGAACATCTCATCTCT+GGG 0.532598 1_2:+68643563 Msa0087700:CDS
TCTGCCTTATTGTACTTGCA+TGG 0.532933 1_2:+68642414 Msa0087700:CDS
AAGTTGTTGCTTAATGGGGT+TGG 0.533169 1_2:+68646655 Msa0087700:CDS
TCTGCTGAAACTCTTGTAGT+TGG 0.534649 1_2:+68647893 Msa0087700:CDS
TGTGCAGTTGCAATTAAAGA+TGG 0.535167 1_2:-68648172 None:intergenic
TTGGAGGATGGAACATTACC+AGG 0.535227 1_2:+68643872 Msa0087700:CDS
ATTGTACTTGCATGGTTTAG+GGG 0.535919 1_2:+68642422 Msa0087700:CDS
CCCAAGAAGAGATGCAAACA+AGG 0.536000 1_2:-68646323 None:intergenic
TGTAGATGGCATTGATGTGC+TGG 0.539854 1_2:+68644906 Msa0087700:CDS
TAGAAGACCTGCAATTGCCC+AGG 0.540149 1_2:+68646606 Msa0087700:CDS
GTGGCGTGGCGAATAGGGTG+TGG 0.542984 1_2:-68643353 None:intergenic
CTGAAAATAATGGGCTGTGA+TGG 0.543699 1_2:-68648799 None:intergenic
AAAATAGGTTGTAGTAATGA+TGG 0.544130 1_2:+68642582 Msa0087700:CDS
GAGTGATACTGAAGCTGAAT+GGG 0.544198 1_2:+68644305 Msa0087700:CDS
TAAAACTTTAGCTATTGCTA+GGG 0.544802 1_2:-68649885 None:intergenic
TCTAAAGGTTCGACTGCTGT+CGG 0.545203 1_2:+68645976 Msa0087700:CDS
ACAAGTTTGATAAGACCAAT+GGG 0.545333 1_2:-68644636 None:intergenic
CGAACCTTTAGAAATTTCCT+GGG 0.546014 1_2:-68645965 None:intergenic
GCTGCAAATCTTGCAAAGCA+GGG 0.546324 1_2:+68644207 Msa0087700:CDS
TCCTGTTGATCTTGGCATTG+TGG 0.547976 1_2:-68643309 None:intergenic
CCTGGAAACTATTCACCCAT+TGG 0.548492 1_2:+68644621 Msa0087700:CDS
TGTCGAAGCATGCATCCAAA+AGG 0.549111 1_2:+68643931 Msa0087700:CDS
GGACAGAACTTTACGAGTCT+GGG 0.549138 1_2:+68648401 Msa0087700:CDS
GACAGAAGAAGTCATTGTAA+AGG 0.549270 1_2:+68645209 Msa0087700:CDS
AATTTAGCTTTGCAAGAGAG+TGG 0.549287 1_2:+68642537 Msa0087700:CDS
AGCCTGATCCTGTCCAGAGT+TGG 0.549589 1_2:+68645130 Msa0087700:CDS
GTGATTCAGTGGGAATATGC+AGG 0.549614 1_2:+68646547 Msa0087700:intron
AACATTACCAGGATTTCTGC+AGG 0.549934 1_2:+68643883 Msa0087700:CDS
GAAATAAGCAGATGTTCCTC+GGG 0.550542 1_2:-68648369 None:intergenic
AAAGAACTCCAACTCTGGAC+AGG 0.551010 1_2:-68645138 None:intergenic
CATGGTTTAGGGGTTTCCCA+TGG 0.551177 1_2:+68642432 Msa0087700:CDS
GAATCTACCGTTTATACTGC+GGG 0.551687 1_2:+68646967 Msa0087700:CDS
GCAGATGGGGAAGCTTCAAA+TGG 0.551950 1_2:+68641544 Msa0087700:CDS
CAGATTAGCAGGAAGAAGGT+GGG 0.552014 1_2:+68642725 Msa0087700:CDS
CAACTTGTAATCATTCTGGA+AGG 0.555122 1_2:+68641995 Msa0087700:CDS
CAAGTTGTATTCCTAAACAA+AGG 0.555731 1_2:-68641979 None:intergenic
CTCTCTTTGGAATTTGTCAG+CGG 0.556420 1_2:+68645872 Msa0087700:CDS
TGGTACACCAATCTCCTCAC+TGG 0.556845 1_2:-68644713 None:intergenic
TCTTAGCAACAATTGCGGCC+TGG 0.557464 1_2:-68643262 None:intergenic
TAGATTACTAGTTCAGCAGA+TGG 0.557490 1_2:+68641529 Msa0087700:intron
TCTAGCAAGGCGCAGGCAGG+TGG 0.558943 1_2:+68648136 Msa0087700:CDS
TAAACAGATTAGCAGGAAGA+AGG 0.559223 1_2:+68642721 Msa0087700:CDS
GACATAAGTTGCATACACGT+TGG 0.561418 1_2:+68645337 Msa0087700:CDS
ATTGAGTCTTCGGAAGCACC+AGG 0.561926 1_2:-68642308 None:intergenic
TTTGGATGCCTCAAAGAGCC+GGG 0.562611 1_2:-68642240 None:intergenic
AACATCTGATTACACTAACC+TGG 0.563002 1_2:+68642290 Msa0087700:CDS
AGTATTTGCTGAGTCAGAAA+CGG 0.563846 1_2:+68647724 Msa0087700:CDS
GATTAGCAGGAAGAAGGTGG+GGG 0.563910 1_2:+68642727 Msa0087700:CDS
AGCAAAGTTGTTGCTTAATG+GGG 0.564351 1_2:+68646651 Msa0087700:CDS
GGTATGCCTGTTTACCAACT+CGG 0.570110 1_2:-68644600 None:intergenic
TGCAATTAAAGATGGTGAGG+TGG 0.572550 1_2:-68648164 None:intergenic
AGATTAGCAGGAAGAAGGTG+GGG 0.572744 1_2:+68642726 Msa0087700:CDS
TCAGGGCTCTCTGCCCAAGA+AGG 0.574360 1_2:-68643140 None:intergenic
GAGCTAAAATCAACAACCCA+AGG 0.575046 1_2:-68642774 None:intergenic
TTGAGATTAACACACGGAGT+GGG 0.576834 1_2:-68649745 None:intergenic
CCACAATCCCAGGGAAGTAG+AGG 0.577363 1_2:+68646688 Msa0087700:CDS
TGACTGACTCGTTATGGTCA+TGG 0.578705 1_2:+68642481 Msa0087700:CDS
GAGATTAACACACGGAGTGG+GGG 0.579244 1_2:-68649743 None:intergenic
ATCAGCCATACCATCATGTA+CGG 0.579669 1_2:-68643108 None:intergenic
GTCAAAAGCTTCATATCTGG+AGG 0.580184 1_2:+68648056 Msa0087700:CDS
GATCTTGATGTCAGTGATGG+TGG 0.580417 1_2:+68641916 Msa0087700:CDS
TGTTGCTTAATGGGGTTGGA+TGG 0.580653 1_2:+68646659 Msa0087700:CDS
TTTATCATCTAGTGGAAGAG+TGG 0.581003 1_2:+68647646 Msa0087700:CDS
TTGATAGAGCCTCTGCATTG+AGG 0.583870 1_2:-68643030 None:intergenic
ATGACACATCAATGAATGAT+CGG 0.584318 1_2:-68645098 None:intergenic
TTGGAAATATACTTGGAGGA+TGG 0.586202 1_2:+68643860 Msa0087700:CDS
TATACTGCGGGAATTGGCCA+AGG 0.586424 1_2:+68646979 Msa0087700:CDS
GTGTTATTCTGGCAGTGGCG+TGG 0.586643 1_2:-68643367 None:intergenic
ATAATTGAAGACGAGTTGAT+CGG 0.586839 1_2:-68641357 None:intergenic
TGCTGTCGGCAGAAACTCGA+AGG 0.587841 1_2:+68645990 Msa0087700:CDS
ATGATACCTTCCAGTTATGA+CGG 0.588435 1_2:-68646405 None:intergenic
TTCCCAAAGCAGTGAACAAG+GGG 0.588580 1_2:-68644874 None:intergenic
TCTCTGGGAGATCCAACCGC+AGG 0.588646 1_2:+68643578 Msa0087700:CDS
ATATCCAGTTTCTCCATTTG+GGG 0.589233 1_2:+68648838 Msa0087700:CDS
ACAGATTAGCAGGAAGAAGG+TGG 0.590370 1_2:+68642724 Msa0087700:CDS
AAATGCAGGCCCATCCCAGA+TGG 0.592310 1_2:-68646830 None:intergenic
AAAAGCTTCATATCTGGAGG+GGG 0.594468 1_2:+68648059 Msa0087700:CDS
CATTCATCTGATACATGATG+AGG 0.596133 1_2:-68642906 None:intergenic
TGGACGGACATATATTACCA+TGG 0.597540 1_2:-68642449 None:intergenic
AAGTGGAGCAAGAAACAAGT+AGG 0.597875 1_2:-68644148 None:intergenic
TCAGTAAAGTGATTCCATGA+AGG 0.599704 1_2:+68641283 Msa0087700:exon
TAGAGCCTCTGCATTGAGGA+AGG 0.602901 1_2:-68643026 None:intergenic
TGAGATTAACACACGGAGTG+GGG 0.603867 1_2:-68649744 None:intergenic
GTATTCAGATGTGAATCCCT+GGG 0.604728 1_2:-68646623 None:intergenic
ATGTTCCTCTGGTTCTAGCA+AGG 0.604833 1_2:+68648123 Msa0087700:CDS
GAAGAAACATAGAGTTTCTG+GGG 0.604881 1_2:-68649532 None:intergenic
GATTACTAGTTCAGCAGATG+GGG 0.605426 1_2:+68641531 Msa0087700:intron
TTGCCTCTGAAGATATTGCA+AGG 0.605556 1_2:+68643768 Msa0087700:CDS
TGAAGAAACTAACCTCCTCA+TGG 0.605744 1_2:-68647065 None:intergenic
GTCCCTTGCAATATCTTCAG+AGG 0.606438 1_2:-68643771 None:intergenic
CATAAGTTGCATACACGTTG+GGG 0.609049 1_2:+68645339 Msa0087700:CDS
GGACGGACATATATTACCAT+GGG 0.609304 1_2:-68642448 None:intergenic
CAGATGATAATTGTGATGTA+GGG 0.610503 1_2:+68642802 Msa0087700:CDS
TGCAGGCCCATCCCAGATGG+TGG 0.611271 1_2:-68646827 None:intergenic
CGCGAAATATGGAACCGAGT+TGG 0.611423 1_2:+68644586 Msa0087700:CDS
ATTCTAGCTTTCATCAGTGG+TGG 0.612673 1_2:+68642661 Msa0087700:CDS
GCATCCAAAAGGATTGGATG+AGG 0.614446 1_2:+68643942 Msa0087700:CDS
TTTACAGTTGGCATCACCCG+AGG 0.614534 1_2:+68648353 Msa0087700:intron
CTTCCAAATTGAGAGTCGCA+TGG 0.614661 1_2:+68646038 Msa0087700:CDS
CATATGAAAGAGGAAGATGA+AGG 0.615957 1_2:+68643689 Msa0087700:CDS
AATCAGACTTTAATGCGTTG+GGG 0.617715 1_2:-68642359 None:intergenic
TCAGTCAACATGATATTGGA+CGG 0.619115 1_2:-68642465 None:intergenic
AGAAGACCTGCAATTGCCCA+GGG 0.619966 1_2:+68646607 Msa0087700:CDS
TTCAATGGCAGATTTAGACA+AGG 0.622410 1_2:-68648905 None:intergenic
CTTCTGTCAAGAAAGCTACA+AGG 0.624064 1_2:-68645194 None:intergenic
CTGCGCCTTGCTAGAACCAG+AGG 0.625270 1_2:-68648128 None:intergenic
CTCTGGGAGATCCAACCGCA+GGG 0.627286 1_2:+68643579 Msa0087700:CDS
AGCCCAGTAGTAATGCAAGA+AGG 0.627415 1_2:+68646754 Msa0087700:CDS
ATGCTGAATGGTTTGTGGGA+TGG 0.627790 1_2:-68647754 None:intergenic
ATCCAGACTTGCTTCTCTGG+AGG 0.629702 1_2:+68643723 Msa0087700:CDS
GGAAGAGTGGCATCTTGTGA+CGG 0.632199 1_2:+68647659 Msa0087700:CDS
TGCCTCTGAAGATATTGCAA+GGG 0.635052 1_2:+68643769 Msa0087700:CDS
ATTCATCTGATACATGATGA+GGG 0.637705 1_2:-68642905 None:intergenic
AGGTTCATTGATGTTGCTCG+AGG 0.638433 1_2:+68648034 Msa0087700:intron
ACAAGTATTCTAACATGAGG+AGG 0.638461 1_2:-68643911 None:intergenic
TGGAGCAAGAAACAAGTAGG+AGG 0.638616 1_2:-68644145 None:intergenic
ATTGCACCGATTGCTTGCGT+CGG 0.641706 1_2:+68642045 Msa0087700:CDS
GCAATTTAATGAAATCCTCA+GGG 0.647213 1_2:-68643157 None:intergenic
TCAAAAGCTTCATATCTGGA+GGG 0.650188 1_2:+68648057 Msa0087700:CDS
AGATTAACACACGGAGTGGG+GGG 0.653913 1_2:-68649742 None:intergenic
TTTCCCAAAGCAGTGAACAA+GGG 0.654528 1_2:-68644875 None:intergenic
AATATCCTTCCTCAATGCAG+AGG 0.656083 1_2:+68643021 Msa0087700:CDS
CGGCTATTATGGCCATGAGG+AGG 0.656404 1_2:+68647053 Msa0087700:CDS
GATGATCTTGATGTCAGTGA+TGG 0.656693 1_2:+68641913 Msa0087700:CDS
TCATGATGGATATGTAACAA+AGG 0.657689 1_2:+68648258 Msa0087700:CDS
TGGTCAATTCCACAATCCCA+GGG 0.657919 1_2:+68646679 Msa0087700:CDS
TCTGCAGCTATAAAGCAAGA+AGG 0.658173 1_2:+68642946 Msa0087700:CDS
AGAGACATGGAGAATAGCAG+AGG 0.658726 1_2:-68641411 None:intergenic
AAATTGTTTGATGCAAAGAG+TGG 0.661071 1_2:+68648211 Msa0087700:CDS
TCGACAAGTATTCTAACATG+AGG 0.662646 1_2:-68643914 None:intergenic
AATGAGATTGAATCAAATAG+CGG 0.663763 1_2:-68643839 None:intergenic
TCTACGCCGTCATAACTGGA+AGG 0.664785 1_2:+68646399 Msa0087700:CDS
TGAATCTACCGTTTATACTG+CGG 0.665142 1_2:+68646966 Msa0087700:CDS
ACCAAGTGAACCATGAACCA+TGG 0.670447 1_2:+68646785 Msa0087700:CDS
ATTAGCAGGAAGAAGGTGGG+GGG 0.680097 1_2:+68642728 Msa0087700:CDS
CTTGAGATTAACACACGGAG+TGG 0.682257 1_2:-68649746 None:intergenic
AACGTTCTTAGCAACAATTG+CGG 0.682814 1_2:-68643267 None:intergenic
AAAGCTTCATATCTGGAGGG+GGG 0.688280 1_2:+68648060 Msa0087700:CDS
GACGTCGTCAGCTCTTTATG+CGG 0.688695 1_2:+68643330 Msa0087700:CDS
AGAATAGCAGAGGATCCGAA+AGG 0.690662 1_2:-68641401 None:intergenic
ATATTTGGGATAGTCAAACA+GGG 0.697742 1_2:+68647690 Msa0087700:CDS
ATGATAATTGTGATGTAGGG+TGG 0.702931 1_2:+68642805 Msa0087700:CDS
AGTTGCAATTAAAGATGGTG+AGG 0.705431 1_2:-68648167 None:intergenic
GCTACTAATTGGTTCCAGTG+AGG 0.709343 1_2:+68644699 Msa0087700:CDS
GTCCGGCTATTATGGCCATG+AGG 0.711734 1_2:+68647050 Msa0087700:CDS
AAGAAACATAGAGTTTCTGG+GGG 0.714573 1_2:-68649531 None:intergenic
GGACTAGGGAACCAAAACCA+TGG 0.722956 1_2:-68646802 None:intergenic
TTCTTGGGCAGAGAGCCCTG+AGG 0.744339 1_2:+68643142 Msa0087700:CDS
GAAGACTTGAGATTAACACA+CGG 0.745525 1_2:-68649751 None:intergenic
GCGCACATCATGGAGCAGTG+AGG 0.759244 1_2:+68646923 Msa0087700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGTTTTTTTATTCTTTTT+TGG + chr1_2:68645244-68645263 Msa0087700:intron 10.0%
!! AATTAATATACAATATTTAC+TGG - chr1_2:68645289-68645308 None:intergenic 10.0%
!! AAACTAATAAAATCTTATAT+GGG - chr1_2:68646459-68646478 None:intergenic 10.0%
!! AAAACTAATAAAATCTTATA+TGG - chr1_2:68646460-68646479 None:intergenic 10.0%
!!! AAACAAGTTTTTTTTTTTTT+TGG - chr1_2:68648595-68648614 None:intergenic 10.0%
!!! TATCTCAAAATTTTAAAATA+AGG - chr1_2:68649276-68649295 None:intergenic 10.0%
!!! TTTGTTAAATTTTGGTTTTT+TGG + chr1_2:68641502-68641521 Msa0087700:intron 15.0%
!! TTTCTATAGAAAAAAAAATG+AGG - chr1_2:68641646-68641665 None:intergenic 15.0%
!!! TTACAGAAATGAATATATTT+TGG + chr1_2:68641867-68641886 Msa0087700:intron 15.0%
!!! AAATTATTTTCTTCAAATGA+CGG - chr1_2:68642219-68642238 None:intergenic 15.0%
!!! TAATTTTTTTTCTATATAGG+AGG + chr1_2:68644070-68644089 Msa0087700:intron 15.0%
!! ATCAAAATTAAGACTTATTT+GGG + chr1_2:68645576-68645595 Msa0087700:intron 15.0%
!!! AATGAAGATTTTAAACAAAA+GGG + chr1_2:68647406-68647425 Msa0087700:intron 15.0%
!!! TTTCAATTTGTATTTTTCTA+CGG + chr1_2:68647556-68647575 Msa0087700:intron 15.0%
!!! TATTATTCATCTCAAATTTT+AGG + chr1_2:68647604-68647623 Msa0087700:intron 15.0%
!! GTTCAAATTTCAAAATATTA+GGG + chr1_2:68648287-68648306 Msa0087700:intron 15.0%
!!! TTTATTTTTTTACTGTTGTA+TGG + chr1_2:68649798-68649817 Msa0087700:three_prime_UTR 15.0%
!!! TTATTTTTTTACTGTTGTAT+GGG + chr1_2:68649799-68649818 Msa0087700:three_prime_UTR 15.0%
!! AAACTTAACTTACACATAAT+TGG - chr1_2:68641617-68641636 None:intergenic 20.0%
!! AATTAATTAAACCCAAACAT+TGG - chr1_2:68641802-68641821 None:intergenic 20.0%
!!! TTTGAAGAAAATAATTTTCC+CGG + chr1_2:68642222-68642241 Msa0087700:CDS 20.0%
!! CTTTCATTGACAAAAATTAT+CGG + chr1_2:68643630-68643649 Msa0087700:CDS 20.0%
!!! GATATATGGTTCATTTTATT+TGG - chr1_2:68643659-68643678 None:intergenic 20.0%
!! TATGTTGAAGAAAAGATATA+TGG - chr1_2:68643673-68643692 None:intergenic 20.0%
!!! TGTAAAATTTTTTGTATGGT+TGG - chr1_2:68644396-68644415 None:intergenic 20.0%
!!! AACCATACAAAAAATTTTAC+AGG + chr1_2:68644395-68644414 Msa0087700:intron 20.0%
!! TACAAATGAATCTTGTAAAA+GGG - chr1_2:68644566-68644585 None:intergenic 20.0%
!! AACTAAAATTACCTGATTTA+TGG - chr1_2:68644743-68644762 None:intergenic 20.0%
!! TAAGGTTAATAAAACACTAA+TGG - chr1_2:68644830-68644849 None:intergenic 20.0%
!! AGTCTGATTCAATAATTATA+AGG - chr1_2:68644848-68644867 None:intergenic 20.0%
!! TGATCATTCTAATTAAAACA+AGG - chr1_2:68645560-68645579 None:intergenic 20.0%
!! GATCAAAATTAAGACTTATT+TGG + chr1_2:68645575-68645594 Msa0087700:intron 20.0%
!! CTTATTGAAAATAAATGGTT+CGG - chr1_2:68645775-68645794 None:intergenic 20.0%
!! AAGGTTACCAAATTAAAAAT+TGG + chr1_2:68646009-68646028 Msa0087700:CDS 20.0%
!! TTACCAAATTAAAAATTGGA+GGG + chr1_2:68646013-68646032 Msa0087700:CDS 20.0%
!! AAAAAGAAAAGATGTAAATG+AGG - chr1_2:68646509-68646528 None:intergenic 20.0%
!!! GAATGAAGATTTTAAACAAA+AGG + chr1_2:68647405-68647424 Msa0087700:intron 20.0%
!!! ATTTGTATTTTATCATCTAG+TGG + chr1_2:68647638-68647657 Msa0087700:CDS 20.0%
!!! TTGACAGAGTATTTAAATTA+AGG - chr1_2:68647814-68647833 None:intergenic 20.0%
!! AATTTAAATACTCTGTCAAA+TGG + chr1_2:68647815-68647834 Msa0087700:CDS 20.0%
!! ATTTAAATACTCTGTCAAAT+GGG + chr1_2:68647816-68647835 Msa0087700:CDS 20.0%
!! GGTTCAAATTTCAAAATATT+AGG + chr1_2:68648286-68648305 Msa0087700:intron 20.0%
!! ATCATCTCTTAATAGATTTA+AGG + chr1_2:68649155-68649174 Msa0087700:intron 20.0%
!! TCATCTCTTAATAGATTTAA+GGG + chr1_2:68649156-68649175 Msa0087700:intron 20.0%
!!! TGGAATTAATCAAATTTTTG+TGG + chr1_2:68649300-68649319 Msa0087700:intron 20.0%
!!! AAATTTTGGTCATGATTATA+TGG + chr1_2:68649475-68649494 Msa0087700:intron 20.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr1_2:68641775-68641794 Msa0087700:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG + chr1_2:68641776-68641795 Msa0087700:intron 25.0%
! GGGTTTAATTAATTGATTGT+TGG + chr1_2:68641808-68641827 Msa0087700:intron 25.0%
! AATACAACTTGTAATCATTC+TGG + chr1_2:68641991-68642010 Msa0087700:CDS 25.0%
! TTCATATTCTATACTTCAAC+AGG + chr1_2:68642074-68642093 Msa0087700:CDS 25.0%
! ACGAATTTCCTTAGTTTAAT+TGG + chr1_2:68642189-68642208 Msa0087700:CDS 25.0%
! CGAATTTCCTTAGTTTAATT+GGG + chr1_2:68642190-68642209 Msa0087700:CDS 25.0%
! AAATCAAAACCTGCAAAAAT+AGG + chr1_2:68642567-68642586 Msa0087700:CDS 25.0%
! AAAATAGGTTGTAGTAATGA+TGG + chr1_2:68642582-68642601 Msa0087700:CDS 25.0%
!!! TCCTTTTCATTTGACTTAAT+GGG - chr1_2:68643547-68643566 None:intergenic 25.0%
!!! TTCCTTTTCATTTGACTTAA+TGG - chr1_2:68643548-68643567 None:intergenic 25.0%
!! TTTTCTTCAACATATGAAAG+AGG + chr1_2:68643679-68643698 Msa0087700:CDS 25.0%
! AATGAGATTGAATCAAATAG+CGG - chr1_2:68643842-68643861 None:intergenic 25.0%
! AATCTCATTGGAAATATACT+TGG + chr1_2:68643853-68643872 Msa0087700:CDS 25.0%
!! TTGATTGTTTTCGGAAAATA+AGG - chr1_2:68644123-68644142 None:intergenic 25.0%
!!! AGCCTGTAAAATTTTTTGTA+TGG - chr1_2:68644400-68644419 None:intergenic 25.0%
! GTACAAATGAATCTTGTAAA+AGG - chr1_2:68644567-68644586 None:intergenic 25.0%
! ATCAAACTTGTATATTTCTC+CGG + chr1_2:68644648-68644667 Msa0087700:CDS 25.0%
! ATTACCTGATTTATGGTAAT+TGG - chr1_2:68644736-68644755 None:intergenic 25.0%
! TAGCATCTGTTTAACAATAA+AGG - chr1_2:68645058-68645077 None:intergenic 25.0%
!!! AATTCTTCATTGGTTTGTTT+TGG + chr1_2:68645408-68645427 Msa0087700:intron 25.0%
! TACATTTCAATCAGTATACT+TGG + chr1_2:68645723-68645742 Msa0087700:intron 25.0%
! GATGGCTTATTGAAAATAAA+TGG - chr1_2:68645780-68645799 None:intergenic 25.0%
!!! TCAAACAGTTCTTTAAGTTT+TGG - chr1_2:68645931-68645950 None:intergenic 25.0%
! GTTACCAAATTAAAAATTGG+AGG + chr1_2:68646012-68646031 Msa0087700:CDS 25.0%
! TACCAAATTAAAAATTGGAG+GGG + chr1_2:68646014-68646033 Msa0087700:CDS 25.0%
! TGCAAAAGTAAAATAACTCT+AGG + chr1_2:68646136-68646155 Msa0087700:intron 25.0%
! AGTAAAATAACTCTAGGTAA+AGG + chr1_2:68646142-68646161 Msa0087700:intron 25.0%
!!! TAAATGAGATTTTTTTCGTG+AGG + chr1_2:68646224-68646243 Msa0087700:intron 25.0%
!! TCTTCTCTGAATCAAATTTT+TGG - chr1_2:68646716-68646735 None:intergenic 25.0%
! GGAAATATGTAAATACTACA+GGG - chr1_2:68647145-68647164 None:intergenic 25.0%
! TAGTATTTACATATTTCCCA+TGG + chr1_2:68647147-68647166 Msa0087700:intron 25.0%
!! GATGGTGATTTTAAACATAA+GGG + chr1_2:68647226-68647245 Msa0087700:intron 25.0%
!! ATGGTGATTTTAAACATAAG+GGG + chr1_2:68647227-68647246 Msa0087700:intron 25.0%
!! GTTTAAAATCTTCATTCATC+AGG - chr1_2:68647402-68647421 None:intergenic 25.0%
!! ATTTTAAACAAAAGGGATTG+TGG + chr1_2:68647413-68647432 Msa0087700:intron 25.0%
! ATAATAAGTGTTACATTCCA+AGG - chr1_2:68647590-68647609 None:intergenic 25.0%
! TTGTAAAAACATTCTTACTG+TGG - chr1_2:68648513-68648532 None:intergenic 25.0%
!!! TTGGTATCATTTTGATTACT+AGG - chr1_2:68648576-68648595 None:intergenic 25.0%
!!! AAGATGTTATTTCAATTTCC+CGG + chr1_2:68648863-68648882 Msa0087700:CDS 25.0%
!!! TGTGAATTTCTTTTTTCCTT+TGG + chr1_2:68648969-68648988 Msa0087700:intron 25.0%
! GTATATCCATCATTTATTAC+TGG - chr1_2:68649017-68649036 None:intergenic 25.0%
! ATATACCCATCATTTATTAC+TGG - chr1_2:68649100-68649119 None:intergenic 25.0%
!!! TTAAAATTTTGAGATAGCAG+TGG + chr1_2:68649280-68649299 Msa0087700:intron 25.0%
!!! TAAATTTTTCAGTATTCCCT+TGG - chr1_2:68649337-68649356 None:intergenic 25.0%
!! ATAATTGAAGACGAGTTGAT+CGG - chr1_2:68641360-68641379 None:intergenic 30.0%
TGGTAAAACAATTGTTGTGA+TGG - chr1_2:68641597-68641616 None:intergenic 30.0%
! AAACTGGAAAACCTTTGTTT+AGG + chr1_2:68641968-68641987 Msa0087700:CDS 30.0%
CAAGTTGTATTCCTAAACAA+AGG - chr1_2:68641982-68642001 None:intergenic 30.0%
! GTTTTCAAAATTGCAAGTAC+AGG - chr1_2:68642273-68642292 None:intergenic 30.0%
TCTAAGTTGTATTGAGTCTT+CGG - chr1_2:68642321-68642340 None:intergenic 30.0%
TAAACCATGCAAGTACAATA+AGG - chr1_2:68642421-68642440 None:intergenic 30.0%
TTATTGTACTTGCATGGTTT+AGG + chr1_2:68642420-68642439 Msa0087700:CDS 30.0%
TATTGTACTTGCATGGTTTA+GGG + chr1_2:68642421-68642440 Msa0087700:CDS 30.0%
!! TATGGTCATGGATTAGATTA+TGG + chr1_2:68642493-68642512 Msa0087700:CDS 30.0%
!!! TTACTACAACCTATTTTTGC+AGG - chr1_2:68642579-68642598 None:intergenic 30.0%
AGCTTTCTCCATTAATTGAT+TGG + chr1_2:68642637-68642656 Msa0087700:CDS 30.0%
CTAGAATGCCAATCAATTAA+TGG - chr1_2:68642648-68642667 None:intergenic 30.0%
CAGATGATAATTGTGATGTA+GGG + chr1_2:68642802-68642821 Msa0087700:CDS 30.0%
ATTCATCTGATACATGATGA+GGG - chr1_2:68642908-68642927 None:intergenic 30.0%
ATTGAGGAAGGATATTCATT+AGG - chr1_2:68643017-68643036 None:intergenic 30.0%
ATGTACGGACCTAAAAATTT+GGG - chr1_2:68643096-68643115 None:intergenic 30.0%
GCAATTTAATGAAATCCTCA+GGG - chr1_2:68643160-68643179 None:intergenic 30.0%
TGCAATTTAATGAAATCCTC+AGG - chr1_2:68643161-68643180 None:intergenic 30.0%
TGATGCATTGGAAAGTAATA+GGG + chr1_2:68643184-68643203 Msa0087700:CDS 30.0%
CACTGGATAGATATAATCTT+TGG + chr1_2:68643224-68643243 Msa0087700:CDS 30.0%
ATTTGTTTGGGTCAAAACTT+TGG - chr1_2:68643414-68643433 None:intergenic 30.0%
AATTGCGTATCTACAAGAAT+TGG + chr1_2:68643466-68643485 Msa0087700:CDS 30.0%
! TCATTTGACTTAATGGGTAA+TGG - chr1_2:68643541-68643560 None:intergenic 30.0%
ACCCATTAAGTCAAATGAAA+AGG + chr1_2:68643543-68643562 Msa0087700:CDS 30.0%
GCTATTTGATTCAATCTCAT+TGG + chr1_2:68643841-68643860 Msa0087700:CDS 30.0%
! TCACAAAAAGCATACCTAAT+AGG - chr1_2:68644020-68644039 None:intergenic 30.0%
CACAGGTTATTTACATTTGA+AGG + chr1_2:68644537-68644556 Msa0087700:CDS 30.0%
ATTCATTTGTACGCGAAATA+TGG + chr1_2:68644575-68644594 Msa0087700:CDS 30.0%
ACAAGTTTGATAAGACCAAT+GGG - chr1_2:68644639-68644658 None:intergenic 30.0%
TACAAGTTTGATAAGACCAA+TGG - chr1_2:68644640-68644659 None:intergenic 30.0%
TGTACCAATTACCATAAATC+AGG + chr1_2:68644729-68644748 Msa0087700:CDS 30.0%
ATGACACATCAATGAATGAT+CGG - chr1_2:68645101-68645120 None:intergenic 30.0%
GATTGTATGATGACTTTAGA+TGG + chr1_2:68645171-68645190 Msa0087700:CDS 30.0%
!!! TATTCTTTTTTGGCCACAAA+AGG + chr1_2:68645254-68645273 Msa0087700:intron 30.0%
AGGTTCTTCAAATTCTTCAT+TGG + chr1_2:68645398-68645417 Msa0087700:intron 30.0%
!!! TTTTAGAGCAATTGAATCCA+AGG - chr1_2:68645449-68645468 None:intergenic 30.0%
! TTGGATTCAATTGCTCTAAA+AGG + chr1_2:68645448-68645467 Msa0087700:intron 30.0%
! TTTTCAATCACAAGTCACTA+AGG + chr1_2:68645506-68645525 Msa0087700:intron 30.0%
! GTACTGTGCTAATTTGTATT+AGG - chr1_2:68645657-68645676 None:intergenic 30.0%
! ACTTTTGCATTAAATAGCCA+AGG - chr1_2:68646125-68646144 None:intergenic 30.0%
TGTAATGAAAGTAGATGAGA+AGG + chr1_2:68646181-68646200 Msa0087700:intron 30.0%
AAGCAACCTGCATATAAAAA+GGG - chr1_2:68646296-68646315 None:intergenic 30.0%
TAAACCTATTGTGATTCAGT+GGG + chr1_2:68646537-68646556 Msa0087700:intron 30.0%
TAACAGTTCCTTTATATCCT+TGG - chr1_2:68646999-68647018 None:intergenic 30.0%
ATAAAGGAACTGTTATGAAG+TGG + chr1_2:68647004-68647023 Msa0087700:CDS 30.0%
TAAAGGAACTGTTATGAAGT+GGG + chr1_2:68647005-68647024 Msa0087700:CDS 30.0%
AACCATACGAAACTATTGTT+TGG + chr1_2:68647112-68647131 Msa0087700:intron 30.0%
GGGAAATATGTAAATACTAC+AGG - chr1_2:68647146-68647165 None:intergenic 30.0%
TTGAAACTTAACAGTACCAT+GGG - chr1_2:68647166-68647185 None:intergenic 30.0%
! GGATGGTGATTTTAAACATA+AGG + chr1_2:68647225-68647244 Msa0087700:intron 30.0%
!!! CTTATAGGTTTTTTCAGCTA+CGG + chr1_2:68647348-68647367 Msa0087700:intron 30.0%
TGACGGAACAATTCATATTT+GGG + chr1_2:68647676-68647695 Msa0087700:CDS 30.0%
! ATATTTGGGATAGTCAAACA+GGG + chr1_2:68647690-68647709 Msa0087700:CDS 30.0%
TTAAATTAAGGACATTTGCC+TGG - chr1_2:68647802-68647821 None:intergenic 30.0%
ACAGATGCATACAAGTATAA+AGG - chr1_2:68647868-68647887 None:intergenic 30.0%
! GTTGATGCTTTTCAACTTAA+TGG + chr1_2:68647995-68648014 Msa0087700:intron 30.0%
ATGGTTTATTTGTATTGCAC+AGG + chr1_2:68648014-68648033 Msa0087700:intron 30.0%
AAATTGTTTGATGCAAAGAG+TGG + chr1_2:68648211-68648230 Msa0087700:CDS 30.0%
!! TCATGATGGATATGTAACAA+AGG + chr1_2:68648258-68648277 Msa0087700:CDS 30.0%
! TCAATGTCTTTGTTTACAGT+TGG + chr1_2:68648341-68648360 Msa0087700:intron 30.0%
GTAGGTTTCTATGACATAAA+GGG - chr1_2:68648476-68648495 None:intergenic 30.0%
ATGCATATAATTGCACTCTA+GGG + chr1_2:68648540-68648559 Msa0087700:intron 30.0%
! ATGATAACATACAAGAGTGT+AGG - chr1_2:68648620-68648639 None:intergenic 30.0%
! AGTCAATTAGTTTCTTCTGT+AGG - chr1_2:68648704-68648723 None:intergenic 30.0%
! GACTATGACAAGTTTTCTTT+CGG + chr1_2:68648720-68648739 Msa0087700:intron 30.0%
! AAGTTTTCTTTCGGATTTCT+GGG + chr1_2:68648729-68648748 Msa0087700:intron 30.0%
! GAATGACCTCTGAAAATAAT+GGG - chr1_2:68648811-68648830 None:intergenic 30.0%
! TGAATGACCTCTGAAAATAA+TGG - chr1_2:68648812-68648831 None:intergenic 30.0%
AATATCCAGTTTCTCCATTT+GGG + chr1_2:68648837-68648856 Msa0087700:CDS 30.0%
GGGAAATTGAAATAACATCT+TGG - chr1_2:68648864-68648883 None:intergenic 30.0%
TTATTTCAATTTCCCGGAAT+AGG + chr1_2:68648869-68648888 Msa0087700:CDS 30.0%
AAGAAATTCACATTCTACGT+GGG - chr1_2:68648961-68648980 None:intergenic 30.0%
AAAGAAATTCACATTCTACG+TGG - chr1_2:68648962-68648981 None:intergenic 30.0%
GAATCTATTTGAACAACCAA+AGG - chr1_2:68648988-68649007 None:intergenic 30.0%
ACTCTCCAGTAATAAATGAT+GGG + chr1_2:68649092-68649111 Msa0087700:intron 30.0%
TCTATTAAGAGATGATTGAC+AGG - chr1_2:68649151-68649170 None:intergenic 30.0%
! TGGAAACTGAAAGCTTTTTA+CGG - chr1_2:68649374-68649393 None:intergenic 30.0%
ATTATATGGTTTCATGACAC+AGG + chr1_2:68649489-68649508 Msa0087700:intron 30.0%
AGAAGAAACATAGAGTTTCT+GGG - chr1_2:68649536-68649555 None:intergenic 30.0%
CTCTATGTTTCTTCTGATAA+TGG + chr1_2:68649541-68649560 Msa0087700:CDS 30.0%
ATAAGAAACAATCGAGAGAA+AGG - chr1_2:68649607-68649626 None:intergenic 30.0%
! TTCTCTCGATTGTTTCTTAT+TGG + chr1_2:68649607-68649626 Msa0087700:CDS 30.0%
TTTCTTATTGGAACAGAAGA+TGG + chr1_2:68649619-68649638 Msa0087700:CDS 30.0%
ATGAATTACCATCTTCCAAA+AGG - chr1_2:68649684-68649703 None:intergenic 30.0%
TCAGTAAAGTGATTCCATGA+AGG + chr1_2:68641283-68641302 Msa0087700:exon 35.0%
! TCCAATTCTCCTTTTCCTTT+CGG + chr1_2:68641386-68641405 Msa0087700:CDS 35.0%
AAAAGAGTAAGAGAGAGACA+TGG - chr1_2:68641427-68641446 None:intergenic 35.0%
TAGATTACTAGTTCAGCAGA+TGG + chr1_2:68641529-68641548 Msa0087700:intron 35.0%
AGATTACTAGTTCAGCAGAT+GGG + chr1_2:68641530-68641549 Msa0087700:intron 35.0%
AGTTTCAGACTCATCAGATA+AGG - chr1_2:68641953-68641972 None:intergenic 35.0%
! TTATCTGATGAGTCTGAAAC+TGG + chr1_2:68641952-68641971 Msa0087700:CDS 35.0%
CAACTTGTAATCATTCTGGA+AGG + chr1_2:68641995-68642014 Msa0087700:CDS 35.0%
GTTGCTAATGATTTCCTGTT+CGG + chr1_2:68642096-68642115 Msa0087700:CDS 35.0%
TTGCTAATGATTTCCTGTTC+GGG + chr1_2:68642097-68642116 Msa0087700:CDS 35.0%
ACGGAAACCCAATTAAACTA+AGG - chr1_2:68642200-68642219 None:intergenic 35.0%
AACATCTGATTACACTAACC+TGG + chr1_2:68642290-68642309 Msa0087700:CDS 35.0%
AATCAGACTTTAATGCGTTG+GGG - chr1_2:68642362-68642381 None:intergenic 35.0%
CAATCAGACTTTAATGCGTT+GGG - chr1_2:68642363-68642382 None:intergenic 35.0%
ATTGTACTTGCATGGTTTAG+GGG + chr1_2:68642422-68642441 Msa0087700:CDS 35.0%
TCAGTCAACATGATATTGGA+CGG - chr1_2:68642468-68642487 None:intergenic 35.0%
ATTATGGAATGAACCTGTAC+TGG + chr1_2:68642509-68642528 Msa0087700:CDS 35.0%
GCTAAATTAGATTCCAGTAC+AGG - chr1_2:68642525-68642544 None:intergenic 35.0%
!! AATTTAGCTTTGCAAGAGAG+TGG + chr1_2:68642537-68642556 Msa0087700:CDS 35.0%
CTCATCTTAAACAGATTAGC+AGG + chr1_2:68642714-68642733 Msa0087700:CDS 35.0%
TAAACAGATTAGCAGGAAGA+AGG + chr1_2:68642721-68642740 Msa0087700:CDS 35.0%
GCATTACTGGATGAAATGTA+TGG - chr1_2:68642755-68642774 None:intergenic 35.0%
ATTTCATCCAGTAATGCCTT+GGG + chr1_2:68642758-68642777 Msa0087700:CDS 35.0%
CCTACATCACAATTATCATC+TGG - chr1_2:68642804-68642823 None:intergenic 35.0%
CCAGATGATAATTGTGATGT+AGG + chr1_2:68642801-68642820 Msa0087700:CDS 35.0%
ATGATAATTGTGATGTAGGG+TGG + chr1_2:68642805-68642824 Msa0087700:CDS 35.0%
CATTCATCTGATACATGATG+AGG - chr1_2:68642909-68642928 None:intergenic 35.0%
AGATGAATGTCTGTCTGAAT+TGG + chr1_2:68642920-68642939 Msa0087700:CDS 35.0%
! ATTGTGACCCCCAAATTTTT+AGG + chr1_2:68643084-68643103 Msa0087700:CDS 35.0%
TGTACGGACCTAAAAATTTG+GGG - chr1_2:68643095-68643114 None:intergenic 35.0%
CATGTACGGACCTAAAAATT+TGG - chr1_2:68643097-68643116 None:intergenic 35.0%
!!! ATTTTTAGGTCCGTACATGA+TGG + chr1_2:68643098-68643117 Msa0087700:CDS 35.0%
! TGATTTGGCTATACCTTCTT+GGG + chr1_2:68643127-68643146 Msa0087700:CDS 35.0%
TAAATTGCATCGTGATGCAT+TGG + chr1_2:68643172-68643191 Msa0087700:CDS 35.0%
GTGATGCATTGGAAAGTAAT+AGG + chr1_2:68643183-68643202 Msa0087700:CDS 35.0%
! TGTCATTTCAACTACATCAC+TGG + chr1_2:68643207-68643226 Msa0087700:CDS 35.0%
ATCTTTGGCTACAAAATGTC+TGG + chr1_2:68643239-68643258 Msa0087700:CDS 35.0%
AACGTTCTTAGCAACAATTG+CGG - chr1_2:68643270-68643289 None:intergenic 35.0%
GAACGTTATGCTTACTCAAT+CGG + chr1_2:68643283-68643302 Msa0087700:CDS 35.0%
TCGCTGCATTTCATTTGTTT+GGG - chr1_2:68643426-68643445 None:intergenic 35.0%
!!! ATTTTTAGTGAATGTCCCTG+CGG - chr1_2:68643597-68643616 None:intergenic 35.0%
CATATGAAAGAGGAAGATGA+AGG + chr1_2:68643689-68643708 Msa0087700:CDS 35.0%
CTCATTGGAAATATACTTGG+AGG + chr1_2:68643856-68643875 Msa0087700:CDS 35.0%
TTGGAAATATACTTGGAGGA+TGG + chr1_2:68643860-68643879 Msa0087700:CDS 35.0%
ACAAGTATTCTAACATGAGG+AGG - chr1_2:68643914-68643933 None:intergenic 35.0%
TCGACAAGTATTCTAACATG+AGG - chr1_2:68643917-68643936 None:intergenic 35.0%
ATGCATGTGTTTGACCTATT+AGG + chr1_2:68644003-68644022 Msa0087700:intron 35.0%
! TTTTCTATATAGGAGGCCAT+CGG + chr1_2:68644077-68644096 Msa0087700:intron 35.0%
! AGGTGAATCCAGAAGAATTT+TGG - chr1_2:68644103-68644122 None:intergenic 35.0%
! TAGGAGGACTTGATTGTTTT+CGG - chr1_2:68644132-68644151 None:intergenic 35.0%
! AACATCTTTTTGCAGAACAC+AGG + chr1_2:68644520-68644539 Msa0087700:intron 35.0%
! GATGCAGCTGAATTTTTATC+CGG - chr1_2:68644670-68644689 None:intergenic 35.0%
AAAGCAAAACACATCACTGA+AGG - chr1_2:68644775-68644794 None:intergenic 35.0%
! TAAGTGGGAGTACATTCATT+TGG - chr1_2:68644800-68644819 None:intergenic 35.0%
AAATGAATGTACTCCCACTT+AGG + chr1_2:68644799-68644818 Msa0087700:intron 35.0%
ACTAATGGTATCACCTAAGT+GGG - chr1_2:68644815-68644834 None:intergenic 35.0%
TCAGCTCAGTAACGAAAATA+TGG - chr1_2:68644972-68644991 None:intergenic 35.0%
TGGTAAGTCAAAAAAAAGGG+GGG - chr1_2:68645016-68645035 None:intergenic 35.0%
CTGGTAAGTCAAAAAAAAGG+GGG - chr1_2:68645017-68645036 None:intergenic 35.0%
CCTGGTAAGTCAAAAAAAAG+GGG - chr1_2:68645018-68645037 None:intergenic 35.0%
CCCTGGTAAGTCAAAAAAAA+GGG - chr1_2:68645019-68645038 None:intergenic 35.0%
!!! CCCTTTTTTTTGACTTACCA+GGG + chr1_2:68645016-68645035 Msa0087700:intron 35.0%
!!! CCTTTTTTTTGACTTACCAG+GGG + chr1_2:68645017-68645036 Msa0087700:intron 35.0%
!!! CTTTTTTTTGACTTACCAGG+GGG + chr1_2:68645018-68645037 Msa0087700:intron 35.0%
!! CGGACAACATTTTTCAGTAA+TGG - chr1_2:68645081-68645100 None:intergenic 35.0%
GACAGAAGAAGTCATTGTAA+AGG + chr1_2:68645209-68645228 Msa0087700:CDS 35.0%
!! CTGGTATTTAAAGCCTTTTG+TGG - chr1_2:68645270-68645289 None:intergenic 35.0%
TGAATGCTTTGTGAATACAC+AGG + chr1_2:68645315-68645334 Msa0087700:intron 35.0%
ACATAAGTTGCATACACGTT+GGG + chr1_2:68645338-68645357 Msa0087700:CDS 35.0%
GGTTCTTATGCAGAAACATA+TGG + chr1_2:68645360-68645379 Msa0087700:CDS 35.0%
TATGGAAATTACTGTGCTTC+AGG + chr1_2:68645378-68645397 Msa0087700:CDS 35.0%
AGCAATTGAATCCAAGGAAA+GGG - chr1_2:68645443-68645462 None:intergenic 35.0%
CTTAGATTTACCCTTTACGA+AGG + chr1_2:68645474-68645493 Msa0087700:intron 35.0%
AGCAAAATGTCCTTCGTAAA+GGG - chr1_2:68645487-68645506 None:intergenic 35.0%
AAGCAAAATGTCCTTCGTAA+AGG - chr1_2:68645488-68645507 None:intergenic 35.0%
AATGATTGAGATATGTGCCT+TGG + chr1_2:68645603-68645622 Msa0087700:intron 35.0%
GCACAGCGCTAAAAAAAAAT+TGG - chr1_2:68645690-68645709 None:intergenic 35.0%
CAATTTAAGCAACTAGTCAG+TGG - chr1_2:68645807-68645826 None:intergenic 35.0%
TTCTCCCAGGAAATTTCTAA+AGG + chr1_2:68645961-68645980 Msa0087700:CDS 35.0%
! CGAACCTTTAGAAATTTCCT+GGG - chr1_2:68645968-68645987 None:intergenic 35.0%
! TCGAACCTTTAGAAATTTCC+TGG - chr1_2:68645969-68645988 None:intergenic 35.0%
!! GTCCCCTCCAATTTTTAATT+TGG - chr1_2:68646019-68646038 None:intergenic 35.0%
AATAACTCTAGGTAAAGGAG+AGG + chr1_2:68646147-68646166 Msa0087700:intron 35.0%
! TTTTTCGTGAGGCATATTAG+TGG + chr1_2:68646235-68646254 Msa0087700:intron 35.0%
AGCAACCTGCATATAAAAAG+GGG - chr1_2:68646295-68646314 None:intergenic 35.0%
GAAGCAACCTGCATATAAAA+AGG - chr1_2:68646297-68646316 None:intergenic 35.0%
ATGATACCTTCCAGTTATGA+CGG - chr1_2:68646408-68646427 None:intergenic 35.0%
CTAAACCTATTGTGATTCAG+TGG + chr1_2:68646536-68646555 Msa0087700:intron 35.0%
TATTCCCACTGAATCACAAT+AGG - chr1_2:68646544-68646563 None:intergenic 35.0%
! CAGCAAAGTTGTTGCTTAAT+GGG + chr1_2:68646650-68646669 Msa0087700:CDS 35.0%
! AGCAAAGTTGTTGCTTAATG+GGG + chr1_2:68646651-68646670 Msa0087700:CDS 35.0%
TTCCTTCTTGCATTACTACT+GGG - chr1_2:68646759-68646778 None:intergenic 35.0%
ATTCCTTCTTGCATTACTAC+TGG - chr1_2:68646760-68646779 None:intergenic 35.0%
TCCAAAAAGATGATCTTCCA+TGG + chr1_2:68646869-68646888 Msa0087700:CDS 35.0%
! TCCATGGAAGATCATCTTTT+TGG - chr1_2:68646873-68646892 None:intergenic 35.0%
TGAATCTACCGTTTATACTG+CGG + chr1_2:68646966-68646985 Msa0087700:CDS 35.0%
CACCAAACAATAGTTTCGTA+TGG - chr1_2:68647117-68647136 None:intergenic 35.0%
GTTGAAACTTAACAGTACCA+TGG - chr1_2:68647167-68647186 None:intergenic 35.0%
AACTACAAAGTGAAGTGTGA+TGG + chr1_2:68647204-68647223 Msa0087700:intron 35.0%
! ATTTTAAACATAAGGGGCAG+TGG + chr1_2:68647233-68647252 Msa0087700:intron 35.0%
CAAGGAGTAATTGTTATGAC+TGG - chr1_2:68647491-68647510 None:intergenic 35.0%
!!! TATAGTTTTTTCCGCTCAAG+TGG + chr1_2:68647531-68647550 Msa0087700:intron 35.0%
AAATTGAAAAGCCACTTGAG+CGG - chr1_2:68647545-68647564 None:intergenic 35.0%
TTTCTACGGTAACTTATCCT+TGG + chr1_2:68647570-68647589 Msa0087700:intron 35.0%
TTTATCATCTAGTGGAAGAG+TGG + chr1_2:68647646-68647665 Msa0087700:CDS 35.0%
! GTGACGGAACAATTCATATT+TGG + chr1_2:68647675-68647694 Msa0087700:CDS 35.0%
! CATATTTGGGATAGTCAAAC+AGG + chr1_2:68647689-68647708 Msa0087700:CDS 35.0%
! AGTATTTGCTGAGTCAGAAA+CGG + chr1_2:68647724-68647743 Msa0087700:CDS 35.0%
TCAAAAGCTTCATATCTGGA+GGG + chr1_2:68648057-68648076 Msa0087700:CDS 35.0%
AGTTGCAATTAAAGATGGTG+AGG - chr1_2:68648170-68648189 None:intergenic 35.0%
TGTGCAGTTGCAATTAAAGA+TGG - chr1_2:68648175-68648194 None:intergenic 35.0%
! GGATATGTAACAAAGGTATG+TGG + chr1_2:68648265-68648284 Msa0087700:intron 35.0%
GACATAAAGGGAGATAAGAT+AGG - chr1_2:68648464-68648483 None:intergenic 35.0%
CGTAGGTTTCTATGACATAA+AGG - chr1_2:68648477-68648496 None:intergenic 35.0%
TTATGTCATAGAAACCTACG+TGG + chr1_2:68648477-68648496 Msa0087700:intron 35.0%
GATGCATATAATTGCACTCT+AGG + chr1_2:68648539-68648558 Msa0087700:intron 35.0%
! CAAGTTTTCTTTCGGATTTC+TGG + chr1_2:68648728-68648747 Msa0087700:intron 35.0%
GTAATAAAGAGATGAGCTAC+AGG - chr1_2:68648764-68648783 None:intergenic 35.0%
CATCTCTTTATTACTCATGC+AGG + chr1_2:68648770-68648789 Msa0087700:intron 35.0%
! ATTTTCAGAGGTCATTCAGA+TGG + chr1_2:68648814-68648833 Msa0087700:CDS 35.0%
GAATATCCAGTTTCTCCATT+TGG + chr1_2:68648836-68648855 Msa0087700:CDS 35.0%
ATATCCAGTTTCTCCATTTG+GGG + chr1_2:68648838-68648857 Msa0087700:CDS 35.0%
TTCAATGGCAGATTTAGACA+AGG - chr1_2:68648908-68648927 None:intergenic 35.0%
GTCTAAATCTGCCATTGAAA+CGG + chr1_2:68648909-68648928 Msa0087700:CDS 35.0%
CATCATTTATTACTGGACAG+TGG - chr1_2:68649010-68649029 None:intergenic 35.0%
CACTGTCCAGTAATAAATGA+TGG + chr1_2:68649008-68649027 Msa0087700:intron 35.0%
GGAATCTATTTGAACAGCAT+TGG - chr1_2:68649072-68649091 None:intergenic 35.0%
CATCATTTATTACTGGAGAG+TGG - chr1_2:68649093-68649112 None:intergenic 35.0%
CACTCTCCAGTAATAAATGA+TGG + chr1_2:68649091-68649110 Msa0087700:intron 35.0%
TAAGAGATGATTGACAGGAA+GGG - chr1_2:68649146-68649165 None:intergenic 35.0%
TTAAGAGATGATTGACAGGA+AGG - chr1_2:68649147-68649166 None:intergenic 35.0%
GATATGTGTCATGATTTCAG+CGG - chr1_2:68649243-68649262 None:intergenic 35.0%
AGTTTCCATATTCAGTTGCA+TGG + chr1_2:68649386-68649405 Msa0087700:intron 35.0%
GTTTCCATATTCAGTTGCAT+GGG + chr1_2:68649387-68649406 Msa0087700:intron 35.0%
! AAGAAACATAGAGTTTCTGG+GGG - chr1_2:68649534-68649553 None:intergenic 35.0%
GAAGAAACATAGAGTTTCTG+GGG - chr1_2:68649535-68649554 None:intergenic 35.0%
CAGAAGAAACATAGAGTTTC+TGG - chr1_2:68649537-68649556 None:intergenic 35.0%
GAAGACTTGAGATTAACACA+CGG - chr1_2:68649754-68649773 None:intergenic 35.0%
TCCGAAAGGAAAAGGAGAAT+TGG - chr1_2:68641390-68641409 None:intergenic 40.0%
GATTACTAGTTCAGCAGATG+GGG + chr1_2:68641531-68641550 Msa0087700:intron 40.0%
GACATCAAGATCATCACTCT+TGG - chr1_2:68641908-68641927 None:intergenic 40.0%
GATGATCTTGATGTCAGTGA+TGG + chr1_2:68641913-68641932 Msa0087700:CDS 40.0%
TCACTTGATCTCTTCGTTGA+AGG + chr1_2:68642144-68642163 Msa0087700:CDS 40.0%
CACTTGATCTCTTCGTTGAA+GGG + chr1_2:68642145-68642164 Msa0087700:CDS 40.0%
! ATAATTTTCCCGGCTCTTTG+AGG + chr1_2:68642232-68642251 Msa0087700:CDS 40.0%
CCAATCAGACTTTAATGCGT+TGG - chr1_2:68642364-68642383 None:intergenic 40.0%
CCAACGCATTAAAGTCTGAT+TGG + chr1_2:68642361-68642380 Msa0087700:CDS 40.0%
! TCTGCCTTATTGTACTTGCA+TGG + chr1_2:68642414-68642433 Msa0087700:CDS 40.0%
GGACGGACATATATTACCAT+GGG - chr1_2:68642451-68642470 None:intergenic 40.0%
TGGACGGACATATATTACCA+TGG - chr1_2:68642452-68642471 None:intergenic 40.0%
CGAGTCAGTCAACATGATAT+TGG - chr1_2:68642472-68642491 None:intergenic 40.0%
!! TCATGTTGACTGACTCGTTA+TGG + chr1_2:68642475-68642494 Msa0087700:CDS 40.0%
!! ATTCTAGCTTTCATCAGTGG+TGG + chr1_2:68642661-68642680 Msa0087700:CDS 40.0%
CATTTCATCCAGTAATGCCT+TGG + chr1_2:68642757-68642776 Msa0087700:CDS 40.0%
GAGCTAAAATCAACAACCCA+AGG - chr1_2:68642777-68642796 None:intergenic 40.0%
GAGACTTAAGCAAGAGCAAA+TGG + chr1_2:68642829-68642848 Msa0087700:CDS 40.0%
AGGGATTTCAGACGTTGAAT+AGG - chr1_2:68642889-68642908 None:intergenic 40.0%
TCTGCAGCTATAAAGCAAGA+AGG + chr1_2:68642946-68642965 Msa0087700:CDS 40.0%
AATATCCTTCCTCAATGCAG+AGG + chr1_2:68643021-68643040 Msa0087700:CDS 40.0%
!! AACTCTGGAATGCATTCATC+AGG - chr1_2:68643062-68643081 None:intergenic 40.0%
GTACGGACCTAAAAATTTGG+GGG - chr1_2:68643094-68643113 None:intergenic 40.0%
ATCAGCCATACCATCATGTA+CGG - chr1_2:68643111-68643130 None:intergenic 40.0%
ACATGATGGTATGGCTGATT+TGG + chr1_2:68643112-68643131 Msa0087700:CDS 40.0%
!! CTGATTTGGCTATACCTTCT+TGG + chr1_2:68643126-68643145 Msa0087700:CDS 40.0%
! ATTACGTGTTATTCTGGCAG+TGG - chr1_2:68643375-68643394 None:intergenic 40.0%
ACTGCCAGAATAACACGTAA+TGG + chr1_2:68643374-68643393 Msa0087700:CDS 40.0%
CTGCCAGAATAACACGTAAT+GGG + chr1_2:68643375-68643394 Msa0087700:CDS 40.0%
! TGACCCATTACGTGTTATTC+TGG - chr1_2:68643381-68643400 None:intergenic 40.0%
CTCGCTGCATTTCATTTGTT+TGG - chr1_2:68643427-68643446 None:intergenic 40.0%
! GGAACAAGCATCTGCATTTT+CGG + chr1_2:68643487-68643506 Msa0087700:CDS 40.0%
AAGGAAGAACATCTCATCTC+TGG + chr1_2:68643562-68643581 Msa0087700:CDS 40.0%
AGGAAGAACATCTCATCTCT+GGG + chr1_2:68643563-68643582 Msa0087700:CDS 40.0%
! TTGCCTCTGAAGATATTGCA+AGG + chr1_2:68643768-68643787 Msa0087700:CDS 40.0%
! TGCCTCTGAAGATATTGCAA+GGG + chr1_2:68643769-68643788 Msa0087700:CDS 40.0%
! GCAAGGGACATATTTTCTGT+CGG + chr1_2:68643785-68643804 Msa0087700:CDS 40.0%
!! ATTTTCTGTCGGTTGTCTCT+TGG + chr1_2:68643796-68643815 Msa0087700:CDS 40.0%
AACATTACCAGGATTTCTGC+AGG + chr1_2:68643883-68643902 Msa0087700:CDS 40.0%
AAGCATGCATCCAAAAGGAT+TGG + chr1_2:68643936-68643955 Msa0087700:CDS 40.0%
! GATACCTCATCCAATCCTTT+TGG - chr1_2:68643949-68643968 None:intergenic 40.0%
AAGTGGAGCAAGAAACAAGT+AGG - chr1_2:68644151-68644170 None:intergenic 40.0%
TCTTTAGCAACAAGCTGAAG+TGG - chr1_2:68644168-68644187 None:intergenic 40.0%
CTCGCAACATTCACTATAAG+TGG - chr1_2:68644288-68644307 None:intergenic 40.0%
GAGTGATACTGAAGCTGAAT+GGG + chr1_2:68644305-68644324 Msa0087700:CDS 40.0%
ATGGGCATACGTACTACTAA+AGG + chr1_2:68644323-68644342 Msa0087700:intron 40.0%
AAATTCAGCTGCATCTGCTT+CGG + chr1_2:68644675-68644694 Msa0087700:CDS 40.0%
CACTAATGGTATCACCTAAG+TGG - chr1_2:68644816-68644835 None:intergenic 40.0%
TTTCCCAAAGCAGTGAACAA+GGG - chr1_2:68644878-68644897 None:intergenic 40.0%
! ATTGATGTGCTGGTCAGAAT+TGG + chr1_2:68644916-68644935 Msa0087700:CDS 40.0%
TAAGTCAAAAAAAAGGGGGG+GGG - chr1_2:68645013-68645032 None:intergenic 40.0%
GTAAGTCAAAAAAAAGGGGG+GGG - chr1_2:68645014-68645033 None:intergenic 40.0%
GGTAAGTCAAAAAAAAGGGG+GGG - chr1_2:68645015-68645034 None:intergenic 40.0%
!!! CCCCTTTTTTTTGACTTACC+AGG + chr1_2:68645015-68645034 Msa0087700:intron 40.0%
CCCCTGGTAAGTCAAAAAAA+AGG - chr1_2:68645020-68645039 None:intergenic 40.0%
!!! ACTTACCAGGGGGTATTTTT+GGG + chr1_2:68645028-68645047 Msa0087700:intron 40.0%
CTTCTGTCAAGAAAGCTACA+AGG - chr1_2:68645197-68645216 None:intergenic 40.0%
GACATAAGTTGCATACACGT+TGG + chr1_2:68645337-68645356 Msa0087700:CDS 40.0%
CATAAGTTGCATACACGTTG+GGG + chr1_2:68645339-68645358 Msa0087700:CDS 40.0%
GCAATTGAATCCAAGGAAAG+GGG - chr1_2:68645442-68645461 None:intergenic 40.0%
GAGCAATTGAATCCAAGGAA+AGG - chr1_2:68645444-68645463 None:intergenic 40.0%
! CTTAGTTGCCTTCTGTTTTC+AGG + chr1_2:68645837-68645856 Msa0087700:intron 40.0%
GTTGCTGCTAATACTCTCTT+TGG + chr1_2:68645859-68645878 Msa0087700:CDS 40.0%
!! CTCTCTTTGGAATTTGTCAG+CGG + chr1_2:68645872-68645891 Msa0087700:CDS 40.0%
! TTTGGAATTTGTCAGCGGAT+TGG + chr1_2:68645877-68645896 Msa0087700:CDS 40.0%
TCCAAACTGAATTCCAGAGT+AGG + chr1_2:68646075-68646094 Msa0087700:intron 40.0%
!! ACCTACTCTGGAATTCAGTT+TGG - chr1_2:68646079-68646098 None:intergenic 40.0%
!! TTCCAGAGTAGGTTTTATGC+TGG + chr1_2:68646086-68646105 Msa0087700:intron 40.0%
!! TCCAGAGTAGGTTTTATGCT+GGG + chr1_2:68646087-68646106 Msa0087700:intron 40.0%
CATTAAATAGCCAAGGAGAG+CGG - chr1_2:68646118-68646137 None:intergenic 40.0%
! CTGAACCCCTTTTTATATGC+AGG + chr1_2:68646287-68646306 Msa0087700:intron 40.0%
! ACCTTGTTTGCATCTCTTCT+TGG + chr1_2:68646322-68646341 Msa0087700:CDS 40.0%
! CCTTGTTTGCATCTCTTCTT+GGG + chr1_2:68646323-68646342 Msa0087700:CDS 40.0%
TTCGTCAATGTTGTGCTACA+TGG + chr1_2:68646356-68646375 Msa0087700:CDS 40.0%
GTATTCAGATGTGAATCCCT+GGG - chr1_2:68646626-68646645 None:intergenic 40.0%
TGTATTCAGATGTGAATCCC+TGG - chr1_2:68646627-68646646 None:intergenic 40.0%
CCATTAAGCAACAACTTTGC+TGG - chr1_2:68646652-68646671 None:intergenic 40.0%
! CCAGCAAAGTTGTTGCTTAA+TGG + chr1_2:68646649-68646668 Msa0087700:CDS 40.0%
! AAGTTGTTGCTTAATGGGGT+TGG + chr1_2:68646655-68646674 Msa0087700:CDS 40.0%
! TGAACCATGAACCATGGTTT+TGG + chr1_2:68646791-68646810 Msa0087700:CDS 40.0%
! ACAGATGCTCTGATTTTCCA+TGG - chr1_2:68646889-68646908 None:intergenic 40.0%
GAATCTACCGTTTATACTGC+GGG + chr1_2:68646967-68646986 Msa0087700:CDS 40.0%
GGAATTGGCCAAGGATATAA+AGG + chr1_2:68646988-68647007 Msa0087700:CDS 40.0%
TGAAGAAACTAACCTCCTCA+TGG - chr1_2:68647068-68647087 None:intergenic 40.0%
! ACAAAGTGAAGTGTGATGGA+TGG + chr1_2:68647208-68647227 Msa0087700:intron 40.0%
ACAAGGGTAACTGTCATGAT+TGG - chr1_2:68647311-68647330 None:intergenic 40.0%
TATAAGCACAGCTCAACTCA+AGG - chr1_2:68647334-68647353 None:intergenic 40.0%
!! TTGAGTTGAGCTGTGCTTAT+AGG + chr1_2:68647333-68647352 Msa0087700:intron 40.0%
TATAAGCATAGCTCAGCTCA+AGG - chr1_2:68647515-68647534 None:intergenic 40.0%
! ACAGATGCTGAATGGTTTGT+GGG - chr1_2:68647761-68647780 None:intergenic 40.0%
!! TTTTTGGCACAGATGCTGAA+TGG - chr1_2:68647769-68647788 None:intergenic 40.0%
TCTGCTGAAACTCTTGTAGT+TGG + chr1_2:68647893-68647912 Msa0087700:CDS 40.0%
GAGGTCAAAAGCTTCATATC+TGG + chr1_2:68648053-68648072 Msa0087700:CDS 40.0%
GTCAAAAGCTTCATATCTGG+AGG + chr1_2:68648056-68648075 Msa0087700:CDS 40.0%
CAAAAGCTTCATATCTGGAG+GGG + chr1_2:68648058-68648077 Msa0087700:CDS 40.0%
AAAAGCTTCATATCTGGAGG+GGG + chr1_2:68648059-68648078 Msa0087700:CDS 40.0%
ATTTCTGCTGTATGTTCCTC+TGG + chr1_2:68648112-68648131 Msa0087700:CDS 40.0%
TGCAATTAAAGATGGTGAGG+TGG - chr1_2:68648167-68648186 None:intergenic 40.0%
ATTGCAACTGCACAAAGTTC+TGG + chr1_2:68648181-68648200 Msa0087700:CDS 40.0%
GAAATAAGCAGATGTTCCTC+GGG - chr1_2:68648372-68648391 None:intergenic 40.0%
GGAAATAAGCAGATGTTCCT+CGG - chr1_2:68648373-68648392 None:intergenic 40.0%
GTGGAGTTTATAAACCACGT+AGG - chr1_2:68648494-68648513 None:intergenic 40.0%
!! CTGAAAATAATGGGCTGTGA+TGG - chr1_2:68648802-68648821 None:intergenic 40.0%
! TCACAGCCCATTATTTTCAG+AGG + chr1_2:68648802-68648821 Msa0087700:CDS 40.0%
AATAACATCTTGGCCCCAAA+TGG - chr1_2:68648854-68648873 None:intergenic 40.0%
TCAATTTCCCGGAATAGGAT+TGG + chr1_2:68648874-68648893 Msa0087700:CDS 40.0%
CAATTTCCCGGAATAGGATT+GGG + chr1_2:68648875-68648894 Msa0087700:CDS 40.0%
AAAGAAGCCCAATCCTATTC+CGG - chr1_2:68648885-68648904 None:intergenic 40.0%
! TGAGAAGCATACCGTTTCAA+TGG - chr1_2:68648923-68648942 None:intergenic 40.0%
!! TCTATTTGAACAGCATTGGC+AGG - chr1_2:68649068-68649087 None:intergenic 40.0%
TTGTGGAAGATTATGCACCA+AGG + chr1_2:68649317-68649336 Msa0087700:intron 40.0%
TGTGGAAGATTATGCACCAA+GGG + chr1_2:68649318-68649337 Msa0087700:intron 40.0%
CATCAAGCACAAAGGAATTC+AGG - chr1_2:68649424-68649443 None:intergenic 40.0%
ACAACTGACATCAAGCACAA+AGG - chr1_2:68649432-68649451 None:intergenic 40.0%
TATGGTTTCATGACACAGGA+TGG + chr1_2:68649493-68649512 Msa0087700:intron 40.0%
ATGGTTTCATGACACAGGAT+GGG + chr1_2:68649494-68649513 Msa0087700:intron 40.0%
! ATGCTCTGTTGTTCTCCTTT+TGG + chr1_2:68649666-68649685 Msa0087700:three_prime_UTR 40.0%
!! GTTGTTCTCCTTTTGGAAGA+TGG + chr1_2:68649673-68649692 Msa0087700:three_prime_UTR 40.0%
TTGAGATTAACACACGGAGT+GGG - chr1_2:68649748-68649767 None:intergenic 40.0%
! GCATTCGCTCTTTTCCTTCA+TGG - chr1_2:68641300-68641319 None:intergenic 45.0%
AGAATAGCAGAGGATCCGAA+AGG - chr1_2:68641404-68641423 None:intergenic 45.0%
AGAGACATGGAGAATAGCAG+AGG - chr1_2:68641414-68641433 None:intergenic 45.0%
ATCCAAACAGGGCCAATGTT+TGG + chr1_2:68641787-68641806 Msa0087700:intron 45.0%
TCCAAACAGGGCCAATGTTT+GGG + chr1_2:68641788-68641807 Msa0087700:intron 45.0%
GATCTTGATGTCAGTGATGG+TGG + chr1_2:68641916-68641935 Msa0087700:CDS 45.0%
!! GATGTCAGTGATGGTGGAAA+TGG + chr1_2:68641922-68641941 Msa0087700:CDS 45.0%
GATCTTCAGTTAACCCGAAC+AGG - chr1_2:68642113-68642132 None:intergenic 45.0%
!! TTCGTTGAAGGGAAAGCATC+TGG + chr1_2:68642156-68642175 Msa0087700:CDS 45.0%
GCAAGTACAGGAGCTATGTT+TGG - chr1_2:68642261-68642280 None:intergenic 45.0%
!! TGACTGACTCGTTATGGTCA+TGG + chr1_2:68642481-68642500 Msa0087700:CDS 45.0%
!! GGCATTCTAGCTTTCATCAG+TGG + chr1_2:68642658-68642677 Msa0087700:CDS 45.0%
! AGCTTTCATCAGTGGTGGAA+AGG + chr1_2:68642666-68642685 Msa0087700:CDS 45.0%
ACAGATTAGCAGGAAGAAGG+TGG + chr1_2:68642724-68642743 Msa0087700:CDS 45.0%
CAGATTAGCAGGAAGAAGGT+GGG + chr1_2:68642725-68642744 Msa0087700:CDS 45.0%
AGATTAGCAGGAAGAAGGTG+GGG + chr1_2:68642726-68642745 Msa0087700:CDS 45.0%
! TCAACAACCCAAGGCATTAC+TGG - chr1_2:68642768-68642787 None:intergenic 45.0%
GGCAAAAGGTGATGAACAGT+TGG + chr1_2:68642857-68642876 Msa0087700:CDS 45.0%
GCCTCTTAGTGTTCTTCGAA+TGG + chr1_2:68642971-68642990 Msa0087700:CDS 45.0%
GCCATTCGAAGAACACTAAG+AGG - chr1_2:68642975-68642994 None:intergenic 45.0%
TTGATAGAGCCTCTGCATTG+AGG - chr1_2:68643033-68643052 None:intergenic 45.0%
CAATGCAGAGGCTCTATCAA+TGG + chr1_2:68643033-68643052 Msa0087700:CDS 45.0%
TGGGGGTCACAATAAAACTC+TGG - chr1_2:68643077-68643096 None:intergenic 45.0%
TAGGTCCGTACATGATGGTA+TGG + chr1_2:68643103-68643122 Msa0087700:CDS 45.0%
TCCACAATGCCAAGATCAAC+AGG + chr1_2:68643308-68643327 Msa0087700:CDS 45.0%
TCCTGTTGATCTTGGCATTG+TGG - chr1_2:68643312-68643331 None:intergenic 45.0%
! CTGCATTTTCGGAACATGCT+AGG + chr1_2:68643498-68643517 Msa0087700:CDS 45.0%
! GAGGAAGATGAAGGCTTTTC+AGG + chr1_2:68643698-68643717 Msa0087700:CDS 45.0%
! GATATCCAGACTTGCTTCTC+TGG + chr1_2:68643720-68643739 Msa0087700:CDS 45.0%
GTCCCTTGCAATATCTTCAG+AGG - chr1_2:68643774-68643793 None:intergenic 45.0%
TTGGAGGATGGAACATTACC+AGG + chr1_2:68643872-68643891 Msa0087700:CDS 45.0%
TGTCGAAGCATGCATCCAAA+AGG + chr1_2:68643931-68643950 Msa0087700:CDS 45.0%
GCATCCAAAAGGATTGGATG+AGG + chr1_2:68643942-68643961 Msa0087700:CDS 45.0%
!! TCCAGAAGAATTTTGGCCGA+TGG - chr1_2:68644096-68644115 None:intergenic 45.0%
TGGAGCAAGAAACAAGTAGG+AGG - chr1_2:68644148-68644167 None:intergenic 45.0%
TGCTGCAAATCTTGCAAAGC+AGG + chr1_2:68644206-68644225 Msa0087700:CDS 45.0%
GCTGCAAATCTTGCAAAGCA+GGG + chr1_2:68644207-68644226 Msa0087700:CDS 45.0%
CGAGTGATACTGAAGCTGAA+TGG + chr1_2:68644304-68644323 Msa0087700:CDS 45.0%
!! ATGGAACCGAGTTGGTAAAC+AGG + chr1_2:68644594-68644613 Msa0087700:CDS 45.0%
GGTATGCCTGTTTACCAACT+CGG - chr1_2:68644603-68644622 None:intergenic 45.0%
!! AGTTGGTAAACAGGCATACC+TGG + chr1_2:68644603-68644622 Msa0087700:CDS 45.0%
CCAATGGGTGAATAGTTTCC+AGG - chr1_2:68644624-68644643 None:intergenic 45.0%
CCTGGAAACTATTCACCCAT+TGG + chr1_2:68644621-68644640 Msa0087700:CDS 45.0%
!! TCTGCTTCGGTGCTACTAAT+TGG + chr1_2:68644688-68644707 Msa0087700:CDS 45.0%
! GCTACTAATTGGTTCCAGTG+AGG + chr1_2:68644699-68644718 Msa0087700:CDS 45.0%
! ATTGGTTCCAGTGAGGAGAT+TGG + chr1_2:68644706-68644725 Msa0087700:CDS 45.0%
TTCCCAAAGCAGTGAACAAG+GGG - chr1_2:68644877-68644896 None:intergenic 45.0%
CTTTCCCAAAGCAGTGAACA+AGG - chr1_2:68644879-68644898 None:intergenic 45.0%
!! CTTGTTCACTGCTTTGGGAA+AGG + chr1_2:68644877-68644896 Msa0087700:CDS 45.0%
GGGAAAGGACTATGTGTAGA+TGG + chr1_2:68644892-68644911 Msa0087700:CDS 45.0%
!! TGTAGATGGCATTGATGTGC+TGG + chr1_2:68644906-68644925 Msa0087700:CDS 45.0%
AAGTCAAAAAAAAGGGGGGG+GGG - chr1_2:68645012-68645031 None:intergenic 45.0%
!!! GACTTACCAGGGGGTATTTT+TGG + chr1_2:68645027-68645046 Msa0087700:intron 45.0%
!!! CTTACCAGGGGGTATTTTTG+GGG + chr1_2:68645029-68645048 Msa0087700:intron 45.0%
AAAGAACTCCAACTCTGGAC+AGG - chr1_2:68645141-68645160 None:intergenic 45.0%
GTGCTAAAGAACTCCAACTC+TGG - chr1_2:68645146-68645165 None:intergenic 45.0%
GTGCGATGCTTAGTTTCGAA+AGG - chr1_2:68645635-68645654 None:intergenic 45.0%
! TGGCTTGTATCTTCGTACTG+TGG + chr1_2:68645743-68645762 Msa0087700:intron 45.0%
CAACTAGTCAGTGGACAAGA+TGG - chr1_2:68645798-68645817 None:intergenic 45.0%
AGCAGCAACCTGAAAACAGA+AGG - chr1_2:68645848-68645867 None:intergenic 45.0%
TCTAAAGGTTCGACTGCTGT+CGG + chr1_2:68645976-68645995 Msa0087700:CDS 45.0%
CTTCCAAATTGAGAGTCGCA+TGG + chr1_2:68646038-68646057 Msa0087700:CDS 45.0%
GATCCATGCGACTCTCAATT+TGG - chr1_2:68646044-68646063 None:intergenic 45.0%
TCCCAGCATAAAACCTACTC+TGG - chr1_2:68646091-68646110 None:intergenic 45.0%
CCCAAGAAGAGATGCAAACA+AGG - chr1_2:68646326-68646345 None:intergenic 45.0%
AACTTCTACGCCGTCATAAC+TGG + chr1_2:68646395-68646414 Msa0087700:CDS 45.0%
GTGATTCAGTGGGAATATGC+AGG + chr1_2:68646547-68646566 Msa0087700:intron 45.0%
! TGTTGCTTAATGGGGTTGGA+TGG + chr1_2:68646659-68646678 Msa0087700:CDS 45.0%
ATGGTCAATTCCACAATCCC+AGG + chr1_2:68646678-68646697 Msa0087700:CDS 45.0%
TGGTCAATTCCACAATCCCA+GGG + chr1_2:68646679-68646698 Msa0087700:CDS 45.0%
CTTGCATTACTACTGGGCTT+TGG - chr1_2:68646753-68646772 None:intergenic 45.0%
AGCCCAGTAGTAATGCAAGA+AGG + chr1_2:68646754-68646773 Msa0087700:CDS 45.0%
ACCAAGTGAACCATGAACCA+TGG + chr1_2:68646785-68646804 Msa0087700:CDS 45.0%
ACCATGGTTCATGGTTCACT+TGG - chr1_2:68646789-68646808 None:intergenic 45.0%
GGAACCAAAACCATGGTTCA+TGG - chr1_2:68646798-68646817 None:intergenic 45.0%
! CATCTTTTTGGATTCCCACC+CGG - chr1_2:68646861-68646880 None:intergenic 45.0%
ACCGTTTATACTGCGGGAAT+TGG + chr1_2:68646973-68646992 Msa0087700:CDS 45.0%
GCCAATTCCCGCAGTATAAA+CGG - chr1_2:68646977-68646996 None:intergenic 45.0%
AACTGTCTGTCCGGCTATTA+TGG + chr1_2:68647042-68647061 Msa0087700:CDS 45.0%
ACAGCTCAACTCAAGGACAA+GGG - chr1_2:68647327-68647346 None:intergenic 45.0%
! ATGCTGAATGGTTTGTGGGA+TGG - chr1_2:68647757-68647776 None:intergenic 45.0%
CACAGATGCTGAATGGTTTG+TGG - chr1_2:68647762-68647781 None:intergenic 45.0%
GCCAAAAATTACCAGTGACC+AGG + chr1_2:68647781-68647800 Msa0087700:CDS 45.0%
! GCCTGGTCACTGGTAATTTT+TGG - chr1_2:68647785-68647804 None:intergenic 45.0%
GAAACTCTTGTAGTTGGCAC+TGG + chr1_2:68647899-68647918 Msa0087700:CDS 45.0%
! CTTGTAGTTGGCACTGGAAA+TGG + chr1_2:68647905-68647924 Msa0087700:CDS 45.0%
AGGTTCATTGATGTTGCTCG+AGG + chr1_2:68648034-68648053 Msa0087700:intron 45.0%
AAAGCTTCATATCTGGAGGG+GGG + chr1_2:68648060-68648079 Msa0087700:CDS 45.0%
!! ATGTTCCTCTGGTTCTAGCA+AGG + chr1_2:68648123-68648142 Msa0087700:CDS 45.0%
GTGGAAATGTCGTTGCTTCT+TGG + chr1_2:68648230-68648249 Msa0087700:CDS 45.0%
TCTGCTTATTTCCAGCTCTC+TGG + chr1_2:68648380-68648399 Msa0087700:CDS 45.0%
TAAAGTTCTGTCCAGAGAGC+TGG - chr1_2:68648394-68648413 None:intergenic 45.0%
TGGACAGAACTTTACGAGTC+TGG + chr1_2:68648400-68648419 Msa0087700:CDS 45.0%
GGACAGAACTTTACGAGTCT+GGG + chr1_2:68648401-68648420 Msa0087700:CDS 45.0%
AAGAAGCCCAATCCTATTCC+GGG - chr1_2:68648884-68648903 None:intergenic 45.0%
CGGTATGCTTCTCATGTGTT+AGG + chr1_2:68648929-68648948 Msa0087700:intron 45.0%
!! TTGAACAGCATTGGCAGGAA+GGG - chr1_2:68649063-68649082 None:intergenic 45.0%
!! TTTGAACAGCATTGGCAGGA+AGG - chr1_2:68649064-68649083 None:intergenic 45.0%
! CAGCGGAGAGAGTATATCAA+GGG - chr1_2:68649226-68649245 None:intergenic 45.0%
! TCAGCGGAGAGAGTATATCA+AGG - chr1_2:68649227-68649246 None:intergenic 45.0%
GGTACCCATGCAACTGAATA+TGG - chr1_2:68649394-68649413 None:intergenic 45.0%
TGAGATTAACACACGGAGTG+GGG - chr1_2:68649747-68649766 None:intergenic 45.0%
CTTGAGATTAACACACGGAG+TGG - chr1_2:68649749-68649768 None:intergenic 45.0%
!!! TTTTAAATTTTGTTAAATTT+TGG + chr1_2:68641494-68641513 Msa0087700:intron 5.0%
!!! ATATAATTTTTTTTCTATAT+AGG + chr1_2:68644067-68644086 Msa0087700:intron 5.0%
!!! ATATTTATTTTTCAAAATTT+TGG + chr1_2:68649461-68649480 Msa0087700:intron 5.0%
GCAGAGGATCCGAAAGGAAA+AGG - chr1_2:68641398-68641417 None:intergenic 50.0%
GCAGATGGGGAAGCTTCAAA+TGG + chr1_2:68641544-68641563 Msa0087700:CDS 50.0%
ACCCAAACATTGGCCCTGTT+TGG - chr1_2:68641792-68641811 None:intergenic 50.0%
! CTGGAAGGTTTTCTTGCTCG+AGG + chr1_2:68642010-68642029 Msa0087700:CDS 50.0%
!! ATTGCACCGATTGCTTGCGT+CGG + chr1_2:68642045-68642064 Msa0087700:CDS 50.0%
GACTTTCCGACGCAAGCAAT+CGG - chr1_2:68642054-68642073 None:intergenic 50.0%
TTTGGATGCCTCAAAGAGCC+GGG - chr1_2:68642243-68642262 None:intergenic 50.0%
GTTTGGATGCCTCAAAGAGC+CGG - chr1_2:68642244-68642263 None:intergenic 50.0%
!! ATTGAGTCTTCGGAAGCACC+AGG - chr1_2:68642311-68642330 None:intergenic 50.0%
CATGGTTTAGGGGTTTCCCA+TGG + chr1_2:68642432-68642451 Msa0087700:CDS 50.0%
GATTAGCAGGAAGAAGGTGG+GGG + chr1_2:68642727-68642746 Msa0087700:CDS 50.0%
ATTAGCAGGAAGAAGGTGGG+GGG + chr1_2:68642728-68642747 Msa0087700:CDS 50.0%
AAGCAAGAGCAAATGGCGCT+TGG + chr1_2:68642836-68642855 Msa0087700:CDS 50.0%
AGCAAATGGCGCTTGGCAAA+AGG + chr1_2:68642843-68642862 Msa0087700:CDS 50.0%
TAGAGCCTCTGCATTGAGGA+AGG - chr1_2:68643029-68643048 None:intergenic 50.0%
TGGCTACAAAATGTCTGGCC+AGG + chr1_2:68643244-68643263 Msa0087700:CDS 50.0%
TCTTAGCAACAATTGCGGCC+TGG - chr1_2:68643265-68643284 None:intergenic 50.0%
TGACGACGTCCTGTTGATCT+TGG - chr1_2:68643320-68643339 None:intergenic 50.0%
GACGTCGTCAGCTCTTTATG+CGG + chr1_2:68643330-68643349 Msa0087700:CDS 50.0%
TTAGTGAATGTCCCTGCGGT+TGG - chr1_2:68643593-68643612 None:intergenic 50.0%
! ATCCAGACTTGCTTCTCTGG+AGG + chr1_2:68643723-68643742 Msa0087700:CDS 50.0%
GGTAGTTCCTGCAGAAATCC+TGG - chr1_2:68643893-68643912 None:intergenic 50.0%
GCCATCGGCCAAAATTCTTC+TGG + chr1_2:68644092-68644111 Msa0087700:CDS 50.0%
CGCGAAATATGGAACCGAGT+TGG + chr1_2:68644586-68644605 Msa0087700:CDS 50.0%
TGGTACACCAATCTCCTCAC+TGG - chr1_2:68644716-68644735 None:intergenic 50.0%
TTGCCCCTTGTTCACTGCTT+TGG + chr1_2:68644871-68644890 Msa0087700:CDS 50.0%
TGCCCCTTGTTCACTGCTTT+GGG + chr1_2:68644872-68644891 Msa0087700:CDS 50.0%
AGTCAAAAAAAAGGGGGGGG+GGG - chr1_2:68645011-68645030 None:intergenic 50.0%
GATTCCCCAAAAATACCCCC+TGG - chr1_2:68645036-68645055 None:intergenic 50.0%
! GTTTCGAAAGGCATGAGCCA+AGG - chr1_2:68645623-68645642 None:intergenic 50.0%
! TGATGAGCTTGCTTTCTCCC+AGG + chr1_2:68645948-68645967 Msa0087700:CDS 50.0%
TCTACGCCGTCATAACTGGA+AGG + chr1_2:68646399-68646418 Msa0087700:CDS 50.0%
TAGAAGACCTGCAATTGCCC+AGG + chr1_2:68646606-68646625 Msa0087700:CDS 50.0%
AGAAGACCTGCAATTGCCCA+GGG + chr1_2:68646607-68646626 Msa0087700:CDS 50.0%
TTTGGCACCTCTACTTCCCT+GGG - chr1_2:68646698-68646717 None:intergenic 50.0%
! TTTTGGCACCTCTACTTCCC+TGG - chr1_2:68646699-68646718 None:intergenic 50.0%
GGACTAGGGAACCAAAACCA+TGG - chr1_2:68646805-68646824 None:intergenic 50.0%
TACTCCATACGCGCACATCA+TGG + chr1_2:68646913-68646932 Msa0087700:CDS 50.0%
TATACTGCGGGAATTGGCCA+AGG + chr1_2:68646979-68646998 Msa0087700:CDS 50.0%
AGCCGAACTAACTGTCTGTC+CGG + chr1_2:68647033-68647052 Msa0087700:CDS 50.0%
AGCCGGACAGACAGTTAGTT+CGG - chr1_2:68647038-68647057 None:intergenic 50.0%
CTCCTCATGGCCATAATAGC+CGG - chr1_2:68647055-68647074 None:intergenic 50.0%
CACAGCTCAACTCAAGGACA+AGG - chr1_2:68647328-68647347 None:intergenic 50.0%
CATAGCTCAGCTCAAGGTCA+AGG - chr1_2:68647509-68647528 None:intergenic 50.0%
GGAAGAGTGGCATCTTGTGA+CGG + chr1_2:68647659-68647678 Msa0087700:CDS 50.0%
GCTGAGTCAGAAACGGAATC+TGG + chr1_2:68647731-68647750 Msa0087700:CDS 50.0%
AAGGACATTTGCCTGGTCAC+TGG - chr1_2:68647795-68647814 None:intergenic 50.0%
GCACTGGAAATGGTTCTCTC+AGG + chr1_2:68647915-68647934 Msa0087700:CDS 50.0%
TTTACAGTTGGCATCACCCG+AGG + chr1_2:68648353-68648372 Msa0087700:intron 50.0%
TTGGCCCCAAATGGAGAAAC+TGG - chr1_2:68648845-68648864 None:intergenic 50.0%
! TGCAGTGCATGTGCTTGCTA+AGG + chr1_2:68649181-68649200 Msa0087700:intron 50.0%
! CGGAGAGAGTATATCAAGGG+AGG - chr1_2:68649223-68649242 None:intergenic 50.0%
TCAGTTGCATGGGTACCTTG+TGG + chr1_2:68649397-68649416 Msa0087700:intron 50.0%
CAGTTGCATGGGTACCTTGT+GGG + chr1_2:68649398-68649417 Msa0087700:intron 50.0%
CAAAGGAATTCAGGCCCACA+AGG - chr1_2:68649415-68649434 None:intergenic 50.0%
AGATTAACACACGGAGTGGG+GGG - chr1_2:68649745-68649764 None:intergenic 50.0%
GAGATTAACACACGGAGTGG+GGG - chr1_2:68649746-68649765 None:intergenic 50.0%
! GTGTTATTCTGGCAGTGGCG+TGG - chr1_2:68643370-68643389 None:intergenic 55.0%
TGCCTCCAGAGAAGCAAGTC+TGG - chr1_2:68643728-68643747 None:intergenic 55.0%
TTGCAAAGCAGGGAGCTCTC+AGG + chr1_2:68644217-68644236 Msa0087700:CDS 55.0%
CAGGGAGCTCTCAGGCAAAT+GGG + chr1_2:68644225-68644244 Msa0087700:CDS 55.0%
GTCAAAAAAAAGGGGGGGGG+GGG - chr1_2:68645010-68645029 None:intergenic 55.0%
AGCCTGATCCTGTCCAGAGT+TGG + chr1_2:68645130-68645149 Msa0087700:CDS 55.0%
CTCCAACTCTGGACAGGATC+AGG - chr1_2:68645135-68645154 None:intergenic 55.0%
GGATCTGTCACCCCTTTCCT+TGG + chr1_2:68645429-68645448 Msa0087700:intron 55.0%
TGCTGTCGGCAGAAACTCGA+AGG + chr1_2:68645990-68646009 Msa0087700:CDS 55.0%
GTGAATCCCTGGGCAATTGC+AGG - chr1_2:68646616-68646635 None:intergenic 55.0%
CCTCTACTTCCCTGGGATTG+TGG - chr1_2:68646691-68646710 None:intergenic 55.0%
CCACAATCCCAGGGAAGTAG+AGG + chr1_2:68646688-68646707 Msa0087700:CDS 55.0%
AAATGCAGGCCCATCCCAGA+TGG - chr1_2:68646833-68646852 None:intergenic 55.0%
TGGGATGGGCCTGCATTTCT+TGG + chr1_2:68646835-68646854 Msa0087700:CDS 55.0%
ATGGGCCTGCATTTCTTGGC+CGG + chr1_2:68646839-68646858 Msa0087700:CDS 55.0%
TGCTCCATGATGTGCGCGTA+TGG - chr1_2:68646920-68646939 None:intergenic 55.0%
TCATGGAGCAGTGAGGTCTC+TGG + chr1_2:68646930-68646949 Msa0087700:CDS 55.0%
GAGGTCTCTGGCTGTTCATC+AGG + chr1_2:68646942-68646961 Msa0087700:CDS 55.0%
GTCCGGCTATTATGGCCATG+AGG + chr1_2:68647050-68647069 Msa0087700:CDS 55.0%
CGGCTATTATGGCCATGAGG+AGG + chr1_2:68647053-68647072 Msa0087700:CDS 55.0%
GCTTCTTGGCGTGCTCATGA+TGG + chr1_2:68648244-68648263 Msa0087700:CDS 55.0%
GTGCATCAAGCAGACTGCAG+AGG - chr1_2:68648653-68648672 None:intergenic 55.0%
TCAGGGCTCTCTGCCCAAGA+AGG - chr1_2:68643143-68643162 None:intergenic 60.0%
TTCTTGGGCAGAGAGCCCTG+AGG + chr1_2:68643142-68643161 Msa0087700:CDS 60.0%
TGGCAGTGGCGTGGCGAATA+GGG - chr1_2:68643361-68643380 None:intergenic 60.0%
! TCTCTGGGAGATCCAACCGC+AGG + chr1_2:68643578-68643597 Msa0087700:CDS 60.0%
! CTCTGGGAGATCCAACCGCA+GGG + chr1_2:68643579-68643598 Msa0087700:CDS 60.0%
GCAGGGAGCTCTCAGGCAAA+TGG + chr1_2:68644224-68644243 Msa0087700:CDS 60.0%
CTGGGAGAAACCGCTCTCCT+TGG + chr1_2:68646105-68646124 Msa0087700:intron 60.0%
TCCCTAGTCCAGCCACCATC+TGG + chr1_2:68646815-68646834 Msa0087700:CDS 60.0%
! CCCAGATGGTGGCTGGACTA+GGG - chr1_2:68646819-68646838 None:intergenic 60.0%
CCCTAGTCCAGCCACCATCT+GGG + chr1_2:68646816-68646835 Msa0087700:CDS 60.0%
! TCCCAGATGGTGGCTGGACT+AGG - chr1_2:68646820-68646839 None:intergenic 60.0%
AGTCCAGCCACCATCTGGGA+TGG + chr1_2:68646820-68646839 Msa0087700:CDS 60.0%
! GTCCAGCCACCATCTGGGAT+GGG + chr1_2:68646821-68646840 Msa0087700:CDS 60.0%
TGGGCCTGCATTTCTTGGCC+GGG + chr1_2:68646840-68646859 Msa0087700:CDS 60.0%
CCTGCATTTCTTGGCCGGGT+GGG + chr1_2:68646844-68646863 Msa0087700:CDS 60.0%
GCGCACATCATGGAGCAGTG+AGG + chr1_2:68646923-68646942 Msa0087700:CDS 60.0%
CTGCGCCTTGCTAGAACCAG+AGG - chr1_2:68648131-68648150 None:intergenic 60.0%
!! CTCTGGTTCTAGCAAGGCGC+AGG + chr1_2:68648129-68648148 Msa0087700:CDS 60.0%
ACACACGGAGTGGGGGGATA+CGG - chr1_2:68649739-68649758 None:intergenic 60.0%
GTGGCGTGGCGAATAGGGTG+TGG - chr1_2:68643356-68643375 None:intergenic 65.0%
CTGGCAGTGGCGTGGCGAAT+AGG - chr1_2:68643362-68643381 None:intergenic 65.0%
TGCAGGCCCATCCCAGATGG+TGG - chr1_2:68646830-68646849 None:intergenic 65.0%
GCCTGCATTTCTTGGCCGGG+TGG + chr1_2:68646843-68646862 Msa0087700:CDS 65.0%
CCCACCCGGCCAAGAAATGC+AGG - chr1_2:68646847-68646866 None:intergenic 65.0%
! GGTTCTAGCAAGGCGCAGGC+AGG + chr1_2:68648133-68648152 Msa0087700:CDS 65.0%
TCTAGCAAGGCGCAGGCAGG+TGG + chr1_2:68648136-68648155 Msa0087700:CDS 65.0%
! GGCCCATCCCAGATGGTGGC+TGG - chr1_2:68646826-68646845 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 68641237 68649901 68641237 ID=Msa0087700;Name=Msa0087700
chr1_2 mRNA 68641237 68649901 68641237 ID=Msa0087700-mRNA-1;Parent=Msa0087700;Name=Msa0087700-mRNA-1;_AED=0.08;_eAED=0.08;_QI=62|0.86|0.87|1|1|1|16|238|1610
chr1_2 exon 68641237 68641427 68641237 ID=Msa0087700-mRNA-1:exon:23434;Parent=Msa0087700-mRNA-1
chr1_2 exon 68641532 68641581 68641532 ID=Msa0087700-mRNA-1:exon:23435;Parent=Msa0087700-mRNA-1
chr1_2 exon 68641873 68643963 68641873 ID=Msa0087700-mRNA-1:exon:23436;Parent=Msa0087700-mRNA-1
chr1_2 exon 68644089 68644332 68644089 ID=Msa0087700-mRNA-1:exon:23437;Parent=Msa0087700-mRNA-1
chr1_2 exon 68644535 68644750 68644535 ID=Msa0087700-mRNA-1:exon:23438;Parent=Msa0087700-mRNA-1
chr1_2 exon 68644865 68644937 68644865 ID=Msa0087700-mRNA-1:exon:23439;Parent=Msa0087700-mRNA-1
chr1_2 exon 68645037 68645242 68645037 ID=Msa0087700-mRNA-1:exon:23440;Parent=Msa0087700-mRNA-1
chr1_2 exon 68645337 68645399 68645337 ID=Msa0087700-mRNA-1:exon:23441;Parent=Msa0087700-mRNA-1
chr1_2 exon 68645859 68646067 68645859 ID=Msa0087700-mRNA-1:exon:23442;Parent=Msa0087700-mRNA-1
chr1_2 exon 68646309 68646420 68646309 ID=Msa0087700-mRNA-1:exon:23443;Parent=Msa0087700-mRNA-1
chr1_2 exon 68646556 68647074 68646556 ID=Msa0087700-mRNA-1:exon:23444;Parent=Msa0087700-mRNA-1
chr1_2 exon 68647626 68647936 68647626 ID=Msa0087700-mRNA-1:exon:23445;Parent=Msa0087700-mRNA-1
chr1_2 exon 68648036 68648279 68648036 ID=Msa0087700-mRNA-1:exon:23446;Parent=Msa0087700-mRNA-1
chr1_2 exon 68648360 68648433 68648360 ID=Msa0087700-mRNA-1:exon:23447;Parent=Msa0087700-mRNA-1
chr1_2 exon 68648792 68648930 68648792 ID=Msa0087700-mRNA-1:exon:23448;Parent=Msa0087700-mRNA-1
chr1_2 exon 68649511 68649901 68649511 ID=Msa0087700-mRNA-1:exon:23449;Parent=Msa0087700-mRNA-1
chr1_2 five_prime_UTR 68641237 68641298 68641237 ID=Msa0087700-mRNA-1:five_prime_utr;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68641299 68641427 68641299 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68641532 68641581 68641532 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68641873 68643963 68641873 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68644089 68644332 68644089 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68644535 68644750 68644535 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68644865 68644937 68644865 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68645037 68645242 68645037 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68645337 68645399 68645337 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68645859 68646067 68645859 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68646309 68646420 68646309 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68646556 68647074 68646556 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68647626 68647936 68647626 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68648036 68648279 68648036 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68648360 68648433 68648360 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68648792 68648930 68648792 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 CDS 68649511 68649663 68649511 ID=Msa0087700-mRNA-1:cds;Parent=Msa0087700-mRNA-1
chr1_2 three_prime_UTR 68649664 68649901 68649664 ID=Msa0087700-mRNA-1:three_prime_utr;Parent=Msa0087700-mRNA-1
Gene Sequence

>Msa0087700

ATGAAGGAAAAGAGCGAATGCTTCGAGTGTCTTCAACTCAGAATCAACTCAGATTTCTCCGATCAACTCGTCTTCAATTATGCAATCTCCAATTCTCCTTTTCCTTTCGGATCCTCTGCTATTCTCCATATTACTAGTTCAGCAGATGGGGAAGCTTCAAATGGTCAATTCATATTGCAAAATGAATATATTTTGGATAGTAATGAAAACACCAAGAGTGATGATCTTGATGTCAGTGATGGTGGAAATGGATTTACCTTATCTGATGAGTCTGAAACTGGAAAACCTTTGTTTAGGAATACAACTTGTAATCATTCTGGAAGGTTTTCTTGCTCGAGGACAATTTCTGCAATTGCACCGATTGCTTGCGTCGGAAAGTCTTCATATTCTATACTTCAACAGGTTGCTAATGATTTCCTGTTCGGGTTAACTGAAGATCATGTGTTAAAATCACTTGATCTCTTCGTTGAAGGGAAAGCATCTGGACGAGACAGTACGAATTTCCTTAGTTTAATTGGGTTTCCGTCATTTGAAGAAAATAATTTTCCCGGCTCTTTGAGGCATCCAAACATAGCTCCTGTACTTGCAATTTTGAAAACATCTGATTACACTAACCTGGTGCTTCCGAAGACTCAATACAACTTAGAAAGCATTCTTCATTTTAACCCCAACGCATTAAAGTCTGATTGGAATAGAAGATTTCTTATATATCAGCTACTGTCTGCCTTATTGTACTTGCATGGTTTAGGGGTTTCCCATGGTAATATATGTCCGTCCAATATCATGTTGACTGACTCGTTATGGTCATGGATTAGATTATGGAATGAACCTGTACTGGAATCTAATTTAGCTTTGCAAGAGAGTGGAAGTGTAAAATCAAAACCTGCAAAAATAGGTTGTAGTAATGATGGTTGTCATTCGAATGATCTTTATGCTGATCTAAAGCTTTCTCCATTAATTGATTGGCATTCTAGCTTTCATCAGTGGTGGAAAGGAGAACTAAGTAATTTTGAGTATTTGCTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTTGTTGATTTTAGCTCAAAACCAGATGATAATTGTGATGTAGGGTGGCGAGACTTAAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTGGATTTCACCTATTCAACGTCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGCTATAAAGCAAGAAGGTTGCCTCTTAGTGTTCTTCGAATGGCAGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCTCAATGCAGAGGCTCTATCAATGGACGCCTGATGAATGCATTCCAGAGTTTTATTGTGACCCCCAAATTTTTAGGTCCGTACATGATGGTATGGCTGATTTGGCTATACCTTCTTGGGCAGAGAGCCCTGAGGATTTCATTAAATTGCATCGTGATGCATTGGAAAGTAATAGGGTGTCATTTCAACTACATCACTGGATAGATATAATCTTTGGCTACAAAATGTCTGGCCAGGCCGCAATTGTTGCTAAGAACGTTATGCTTACTCAATCGGAATCCACAATGCCAAGATCAACAGGACGTCGTCAGCTCTTTATGCGGCCACACCCTATTCGCCACGCCACTGCCAGAATAACACGTAATGGGTCAAACAAATATGCCAAAGTTTTGACCCAAACAAATGAAATGCAGCGAGAGACATCTCTTCTATCTGAAATTGCGTATCTACAAGAATTGGAACAAGCATCTGCATTTTCGGAACATGCTAGGCATTTGAATGCTTGTTACCATTACCCATTAAGTCAAATGAAAAGGAAGAACATCTCATCTCTGGGAGATCCAACCGCAGGGACATTCACTAAAAATATAAGTGATGTATCTTTCATTGACAAAAATTATCGGTTGCCAAATAAAATGAACCATATATCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTTTTCAGGATATCCAGACTTGCTTCTCTGGAGGCAGAAATTGTGTTCTTCAAGACTTGCCTCTGAAGATATTGCAAGGGACATATTTTCTGTCGGTTGTCTCTTGGCAGAACTTCATCTTTGCAGACCGCTATTTGATTCAATCTCATTGGAAATATACTTGGAGGATGGAACATTACCAGGATTTCTGCAGGAACTACCTCCTCATGTTAGAATACTTGTCGAAGCATGCATCCAAAAGGATTGGATGAGGAGGCCATCGGCCAAAATTCTTCTGGATTCACCTTATTTTCCGAAAACAATCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTTGCTAAAGATGAATCTCGTCTTCATTTTGCTGCAAATCTTGCAAAGCAGGGAGCTCTCAGGCAAATGGGTACATTTGCAACTGAAATGTGTGCTGCTTACTGCTTACCACTTATAGTGAATGTTGCGAGTGATACTGAAGCTGAATGGGCATACAACACAGGTTATTTACATTTGAAGGTTTCCCTTTTACAAGATTCATTTGTACGCGAAATATGGAACCGAGTTGGTAAACAGGCATACCTGGAAACTATTCACCCATTGGTCTTATCAAACTTGTATATTTCTCCGGATAAAAATTCAGCTGCATCTGCTTCGGTGCTACTAATTGGTTCCAGTGAGGAGATTGGTGTACCAATTACCATAAATCAGACTATTTTGCCCCTTGTTCACTGCTTTGGGAAAGGACTATGTGTAGATGGCATTGATGTGCTGGTCAGAATTGGGGGTATTTTTGGGGAATCCTTTATTGTTAAACAGATGCTACCATTACTGAAAAATGTTGTCCGATCATTCATTGATGTGTCATTCGTGAATAAGCCTGATCCTGTCCAGAGTTGGAGTTCTTTAGCACTTATTGATTGTATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAAGTCATTGTAAAGGAGCTGCTTGAAGACATAAGTTGCATACACGTTGGGGTTCTTATGCAGAAACATATGGAAATTACTGTGCTTCAGGTTGCTGCTAATACTCTCTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACTGCATTGCATATTCTTCCAAAACTTAAAGAACTGTTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCGACTGCTGTCGGCAGAAACTCGAAGGTTACCAAATTAAAAATTGGAGGGGACTTCCAAATTGAGAGTCGCATGGATCTAGTGTTGCTTCTCTATACCTTGTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGCTTCTTGAACAACAACTTCTACGCCGTCATAACTGGAAGTGGGAATATGCAGGAGAATCATCAAGAAATAGCTCAGAAAGTAACATTGCTAGAAGACCTGCAATTGCCCAGGGATTCACATCTGAATACAATCCAGCAAAGTTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAGGGAAGTAGAGGTGCCAAAAATTTGATTCAGAGAAGACCATTTAAAGCTCACCAAAGCCCAGTAGTAATGCAAGAAGGAATGTCAAACCAAGTGAACCATGAACCATGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGCATTTCTTGGCCGGGTGGGAATCCAAAAAGATGATCTTCCATGGAAAATCAGAGCATCTGTAATCTACTCCATACGCGCACATCATGGAGCAGTGAGGTCTCTGGCTGTTCATCAGGATGAATCTACCGTTTATACTGCGGGAATTGGCCAAGGATATAAAGGAACTGTTATGAAGTGGGAATTGAGCCGAACTAACTGTCTGTCCGGCTATTATGGCCATGAGGAGGTTGTAAACGATATTTGTATTTTATCATCTAGTGGAAGAGTGGCATCTTGTGACGGAACAATTCATATTTGGGATAGTCAAACAGGGAAGCAAATATCAGTATTTGCTGAGTCAGAAACGGAATCTGGCCATCCCACAAACCATTCAGCATCTGTGCCAAAAATTACCAGTGACCAGGCAAATGTCCTTAATTTAAATACTCTGTCAAATGGGATGCTGTCTAGTGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTGTTAGACTCTGCTGAAACTCTTGTAGTTGGCACTGGAAATGGTTCTCTCAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGGGGGGAATCTAATGAATCTAGTTTTCATTCACTTATTTCTGCTGTATGTTCCTCTGGTTCTAGCAAGGCGCAGGCAGGTGGAATTTCCACCTCACCATCTTTAATTGCAACTGCACAAAGTTCTGGTCACTGTAAATTGTTTGATGCAAAGAGTGGAAATGTCGTTGCTTCTTGGCGTGCTCATGATGGATATGTAACAAAGTTGGCATCACCCGAGGAACATCTGCTTATTTCCAGCTCTCTGGACAGAACTTTACGAGTCTGGGACTTGAGAATGAATTCACCATCACAGCCCATTATTTTCAGAGGTCATTCAGATGGAATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTTCTTTCCTTGTCTAAATCTGCCATTGAAACGGATGGGCAGCATCACATTATCCCCCAGAAACTCTATGTTTCTTCTGATAATGGAATGAGAAGCTTGTCAGCATTATCAAGTATCAGTATACTTCCTTTCTCTCGATTGTTTCTTATTGGAACAGAAGATGGTTATTTGAGAATTTGTTGTTAA
Protein sequence

>Msa0087700

MKEKSECFECLQLRINSDFSDQLVFNYAISNSPFPFGSSAILHITSSADGEASNGQFILQNEYILDSNENTKSDDLDVSDGGNGFTLSDESETGKPLFRNTTCNHSGRFSCSRTISAIAPIACVGKSSYSILQQVANDFLFGLTEDHVLKSLDLFVEGKASGRDSTNFLSLIGFPSFEENNFPGSLRHPNIAPVLAILKTSDYTNLVLPKTQYNLESILHFNPNALKSDWNRRFLIYQLLSALLYLHGLGVSHGNICPSNIMLTDSLWSWIRLWNEPVLESNLALQESGSVKSKPAKIGCSNDGCHSNDLYADLKLSPLIDWHSSFHQWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVVDFSSKPDDNCDVGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSSMQRLYQWTPDECIPEFYCDPQIFRSVHDGMADLAIPSWAESPEDFIKLHRDALESNRVSFQLHHWIDIIFGYKMSGQAAIVAKNVMLTQSESTMPRSTGRRQLFMRPHPIRHATARITRNGSNKYAKVLTQTNEMQRETSLLSEIAYLQELEQASAFSEHARHLNACYHYPLSQMKRKNISSLGDPTAGTFTKNISDVSFIDKNYRLPNKMNHISFLQHMKEEDEGFSGYPDLLLWRQKLCSSRLASEDIARDIFSVGCLLAELHLCRPLFDSISLEIYLEDGTLPGFLQELPPHVRILVEACIQKDWMRRPSAKILLDSPYFPKTIKSSYLFLAPLQLVAKDESRLHFAANLAKQGALRQMGTFATEMCAAYCLPLIVNVASDTEAEWAYNTGYLHLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKNSAASASVLLIGSSEEIGVPITINQTILPLVHCFGKGLCVDGIDVLVRIGGIFGESFIVKQMLPLLKNVVRSFIDVSFVNKPDPVQSWSSLALIDCMMTLDGLVAFLTEEVIVKELLEDISCIHVGVLMQKHMEITVLQVAANTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTAVGRNSKVTKLKIGGDFQIESRMDLVLLLYTLFASLLGIEKLRQCCATWLLLEQQLLRRHNWKWEYAGESSRNSSESNIARRPAIAQGFTSEYNPAKLLLNGVGWSIPQSQGSRGAKNLIQRRPFKAHQSPVVMQEGMSNQVNHEPWFWFPSPATIWDGPAFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVHQDESTVYTAGIGQGYKGTVMKWELSRTNCLSGYYGHEEVVNDICILSSSGRVASCDGTIHIWDSQTGKQISVFAESETESGHPTNHSASVPKITSDQANVLNLNTLSNGMLSSAFDSSLYTCMHLLDSAETLVVGTGNGSLRFIDVARGQKLHIWRGESNESSFHSLISAVCSSGSSKAQAGGISTSPSLIATAQSSGHCKLFDAKSGNVVASWRAHDGYVTKLASPEEHLLISSSLDRTLRVWDLRMNSPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSAIETDGQHHIIPQKLYVSSDNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC*