AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0094110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094110 MtrunA17_Chr2g0330821 92.330 352 25 1 1 352 1 350 0.0 665
Msa0094110 MtrunA17_Chr8g0378061 66.906 278 72 3 80 340 23 297 2.37e-122 361
Msa0094110 MtrunA17_Chr6g0467041 54.985 331 109 6 60 353 1 328 3.76e-112 330
Msa0094110 MtrunA17_Chr2g0330841 67.511 237 57 3 123 341 24 258 4.63e-97 294
Msa0094110 MtrunA17_Chr5g0410881 48.990 198 90 1 67 253 20 217 2.35e-57 194
Msa0094110 MtrunA17_Chr8g0379701 47.716 197 91 2 60 252 1 189 3.38e-51 175
Msa0094110 MtrunA17_Chr4g0039891 45.946 185 90 1 79 253 12 196 1.99e-47 167
Msa0094110 MtrunA17_Chr1g0204741 43.684 190 98 2 73 256 34 220 4.53e-47 162
Msa0094110 MtrunA17_Chr1g0185131 41.799 189 103 1 65 253 18 199 4.21e-44 155
Msa0094110 MtrunA17_Chr4g0071051 42.632 190 104 3 73 261 95 280 3.08e-43 155
Msa0094110 MtrunA17_Chr3g0135831 40.625 192 110 1 74 261 41 232 1.42e-42 152
Msa0094110 MtrunA17_Chr7g0260331 42.408 191 103 1 73 256 43 233 6.47e-42 150
Msa0094110 MtrunA17_Chr8g0392001 45.455 187 91 4 78 253 21 207 6.62e-39 142
Msa0094110 MtrunA17_Chr6g0485571 38.191 199 95 2 78 262 10 194 3.57e-36 134
Msa0094110 MtrunA17_Chr2g0284481 37.143 210 111 5 60 258 2 201 2.67e-35 132
Msa0094110 MtrunA17_Chr5g0402291 56.731 104 45 0 76 179 6 109 2.19e-34 128
Msa0094110 MtrunA17_Chr5g0397881 54.808 104 47 0 67 170 12 115 3.59e-34 129
Msa0094110 MtrunA17_Chr3g0134031 63.830 94 34 0 77 170 22 115 4.87e-34 129
Msa0094110 MtrunA17_Chr5g0441531 55.882 102 45 0 69 170 15 116 4.94e-32 120
Msa0094110 MtrunA17_Chr1g0203601 54.167 96 44 0 77 172 16 111 1.44e-31 120
Msa0094110 MtrunA17_Chr6g0472421 53.191 94 44 0 77 170 31 124 3.76e-30 118
Msa0094110 MtrunA17_Chr7g0257331 51.064 94 46 0 77 170 20 113 4.22e-29 112
Msa0094110 MtrunA17_Chr8g0375041 52.688 93 44 0 78 170 8 100 1.59e-27 108
Msa0094110 MtrunA17_Chr4g0047421 51.020 98 44 1 77 170 31 128 4.57e-27 106
Msa0094110 MtrunA17_Chr1g0179321 61.667 60 23 0 79 138 49 108 7.15e-22 89.4
Msa0094110 MtrunA17_Chr4g0023771 60.656 61 23 1 79 138 15 75 7.47e-19 81.3
Msa0094110 MtrunA17_Chr2g0330871 84.444 45 7 0 1 45 313 357 1.23e-16 80.9
Msa0094110 MtrunA17_Chr6g0470901 51.648 91 35 3 253 340 38 122 6.61e-16 74.3
Msa0094110 MtrunA17_Chr1g0179311 32.283 127 84 1 140 264 15 141 9.83e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0094110 AT4G13980.1 50.515 291 122 3 80 352 24 310 2.72e-85 266
Msa0094110 AT1G32330.2 49.057 212 89 3 55 253 19 224 7.81e-53 182
Msa0094110 AT1G32330.1 49.057 212 89 3 55 253 19 224 8.12e-53 182
Msa0094110 AT4G17750.1 45.894 207 94 1 65 253 38 244 1.12e-51 179
Msa0094110 AT5G16820.1 47.059 187 90 1 79 256 27 213 2.89e-49 172
Msa0094110 AT5G16820.2 47.059 187 90 1 79 256 27 213 2.89e-49 172
Msa0094110 AT3G02990.1 48.387 186 86 2 79 255 23 207 1.74e-48 170
Msa0094110 AT2G26150.1 41.485 229 122 4 73 290 38 265 3.17e-47 164
Msa0094110 AT2G26150.4 41.485 229 122 4 73 290 38 265 3.17e-47 164
Msa0094110 AT3G22830.1 41.237 194 103 1 74 256 56 249 1.18e-45 161
Msa0094110 AT5G43840.1 43.085 188 96 2 77 263 17 194 5.23e-45 156
Msa0094110 AT5G03720.2 43.316 187 103 2 74 257 49 235 5.79e-44 157
Msa0094110 AT5G03720.1 43.316 187 103 2 74 257 49 235 5.79e-44 157
Msa0094110 AT3G51910.1 41.848 184 96 1 73 256 23 195 1.29e-43 152
Msa0094110 AT4G18880.1 49.721 179 85 1 79 252 15 193 6.70e-42 151
Msa0094110 AT3G63350.1 38.500 200 123 0 57 256 6 205 1.18e-41 147
Msa0094110 AT5G45710.3 43.939 198 100 3 72 258 3 200 2.47e-41 148
Msa0094110 AT5G45710.1 43.939 198 100 3 72 258 3 200 2.47e-41 148
Msa0094110 AT1G67970.1 42.541 181 99 2 78 253 18 198 6.34e-39 142
Msa0094110 AT3G24520.1 42.045 176 83 3 78 253 16 172 2.84e-38 140
Msa0094110 AT1G46264.1 53.782 119 45 1 71 179 26 144 9.51e-35 130
Msa0094110 AT5G54070.1 37.363 182 109 1 75 256 67 243 7.42e-34 128
Msa0094110 AT5G62020.1 49.495 99 50 0 77 175 21 119 3.63e-30 117
Msa0094110 AT4G36990.1 50.943 106 52 0 67 172 2 107 5.74e-30 116
Msa0094110 AT2G41690.1 46.154 117 63 0 77 193 38 154 2.37e-29 114
Msa0094110 AT4G11660.1 51.064 94 46 0 77 170 57 150 1.30e-28 115
Msa0094110 AT4G18870.1 43.434 99 52 2 71 166 2 99 6.66e-18 83.6
Msa0094110 AT4G18870.1 40.909 88 52 0 79 166 146 233 2.96e-17 81.6
Msa0094110 AT1G77570.1 37.000 100 60 2 70 166 17 116 2.59e-15 72.8
Msa0094110 AT2G26150.3 33.333 162 96 5 140 290 50 210 8.86e-14 71.6
Msa0094110 AT2G26150.2 33.333 162 96 5 140 290 50 210 8.86e-14 71.6

Find 138 sgRNAs with CRISPR-Local

Find 831 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCTAAAGCTTCCCTTTC+TGG 0.004045 1_2:+77191862 None:intergenic
TTGACAATCTTTGGTGTTAA+AGG 0.174565 1_2:+77202689 None:intergenic
AAGTTTCAACTGTCATTATT+TGG 0.186856 1_2:+77191340 None:intergenic
ACCTGGTCCTTCAAGGTAAA+AGG 0.202919 1_2:+77194130 None:intergenic
CAAACGTGGTGGAACCGTTT+TGG 0.229702 1_2:-77202657 Msa0094110:five_prime_UTR
TTCCACATGGGCAGAATTAA+TGG 0.250663 1_2:+77202023 None:intergenic
GTTTATATACTTGGAGGATT+TGG 0.261924 1_2:-77202566 Msa0094110:five_prime_UTR
GTTTATTTGCTCAGGAAATT+AGG 0.271110 1_2:-77202278 Msa0094110:intron
GAAATTGTTGTGTTTGAAAT+AGG 0.280393 1_2:+77192990 None:intergenic
TCCTACAGTGTATATTCTTC+AGG 0.294189 1_2:+77191929 None:intergenic
TGAATATCGTTGACAATCTT+TGG 0.313119 1_2:+77202680 None:intergenic
GTTTATTCGAAAATTCTTGA+TGG 0.334012 1_2:+77191557 None:intergenic
CTACTTTACTTGATCATGTT+AGG 0.345999 1_2:-77191666 Msa0094110:CDS
CCAACAACAGCTTTGTGGTT+TGG 0.357531 1_2:-77193047 Msa0094110:CDS
GGAGAACGTAAGCGAATTCC+AGG 0.364208 1_2:+77193019 None:intergenic
TCAGATATGAACTTTGTATC+AGG 0.375340 1_2:-77191508 Msa0094110:CDS
AATAGCTGAAGGTGCAGGTC+AGG 0.377621 1_2:-77194047 Msa0094110:CDS
AGATGATACAGTTGCGCAAC+AGG 0.380696 1_2:-77203242 Msa0094110:intron
ATTTGGATTTGCTTGATAGT+AGG 0.385790 1_2:+77191357 None:intergenic
TCCAGAAAGGGAAGCTTTAG+AGG 0.389076 1_2:-77191863 Msa0094110:CDS
TCGATAGATGTGTCATTAGA+AGG 0.393975 1_2:+77194016 None:intergenic
TGTCTCTTGTCTCTGGTTGT+TGG 0.397183 1_2:+77193210 None:intergenic
AAAGATTGTTGACAGCATTC+AGG 0.398274 1_2:-77202606 Msa0094110:five_prime_UTR
ATTAATCAGGTTTATATACT+TGG 0.406905 1_2:-77202575 Msa0094110:five_prime_UTR
TAGGTTATTGACAAGTCAAT+TGG 0.413245 1_2:-77202078 Msa0094110:five_prime_UTR
CTTCAGACAAATGTTTCTGC+AGG 0.414385 1_2:+77191446 None:intergenic
GTGATAAGAGAATTAGTTTG+TGG 0.425110 1_2:-77202900 Msa0094110:five_prime_UTR
CAATCATTACAATCTCAGTA+TGG 0.432196 1_2:-77191596 Msa0094110:CDS
TCAGGATCGAGGCATTAATC+AGG 0.432382 1_2:-77202588 Msa0094110:five_prime_UTR
ACATGTGGTGGTCTTTGTCC+TGG 0.432818 1_2:-77202933 Msa0094110:five_prime_UTR
CGAAGGCTGTCTCTTGTCTC+TGG 0.436290 1_2:+77193203 None:intergenic
TGAAGGACCAGGTGGGCTAT+TGG 0.436586 1_2:-77194120 Msa0094110:five_prime_UTR
ATTGAGAAAACAAGGACATA+TGG 0.443282 1_2:-77194077 Msa0094110:exon
CTCTACCAACAACAGCTTTG+TGG 0.452629 1_2:-77193052 Msa0094110:CDS
CTCGAGTCCAGGTTATTAAA+CGG 0.459756 1_2:-77191805 Msa0094110:CDS
CGCTGAAAATGAAGGAGGTC+CGG 0.461435 1_2:-77193142 Msa0094110:CDS
TGTGGCTTATACCATATGTA+TGG 0.462630 1_2:-77202882 Msa0094110:five_prime_UTR
AACGACTTGTTTCAAGATGT+TGG 0.464169 1_2:-77193971 Msa0094110:CDS
ATAGCCCACCTGGTCCTTCA+AGG 0.466931 1_2:+77194123 None:intergenic
CCACAGTCATAGTCATCCTC+CGG 0.469987 1_2:-77191899 Msa0094110:CDS
AAGTCGTTCGATGAAGCATC+TGG 0.472231 1_2:+77193986 None:intergenic
TGAATGTAGGGTGGATATAG+AGG 0.472860 1_2:-77202734 Msa0094110:intron
GCGTGCCGGGCCTGCTCAGA+AGG 0.476440 1_2:-77203075 Msa0094110:intron
TCAAGGTAAAAGGGTGACTC+TGG 0.476998 1_2:+77194140 None:intergenic
TATCGGTGTTGTGAAGCTAA+TGG 0.478181 1_2:-77201980 Msa0094110:five_prime_UTR
GGATTATCTTGTAATGGATC+AGG 0.479720 1_2:+77203892 None:intergenic
CAACAATCTTTGAAGTATCA+TGG 0.483388 1_2:+77202618 None:intergenic
CCAAACCACAAAGCTGTTGT+TGG 0.484501 1_2:+77193047 None:intergenic
GAGACAGCCTTCGAGTCAAA+TGG 0.486664 1_2:-77193193 Msa0094110:CDS
TTTGTCAAACTTCTTTGAGA+AGG 0.488131 1_2:-77191701 Msa0094110:CDS
TAAGAAGGATTATCTTGTAA+TGG 0.488187 1_2:+77203886 None:intergenic
CAGCACTCTCTGCTTCCACA+TGG 0.488465 1_2:+77202010 None:intergenic
TGTTTCTGACTTCTTGCTTG+AGG 0.488604 1_2:-77204116 Msa0094110:five_prime_UTR
AATCAGGTTTATATACTTGG+AGG 0.490617 1_2:-77202572 Msa0094110:five_prime_UTR
ATCGGTGTTGTGAAGCTAAT+GGG 0.491067 1_2:-77201979 Msa0094110:five_prime_UTR
TGAATCAACAAAGTTTCAGC+TGG 0.492809 1_2:-77191770 Msa0094110:CDS
TCATACATCTTCTGAACAAA+CGG 0.493257 1_2:+77193117 None:intergenic
AACCGTGCCGTTTAATAACC+TGG 0.495001 1_2:+77191798 None:intergenic
CCTGGTCCTTCAAGGTAAAA+GGG 0.506799 1_2:+77194131 None:intergenic
GTGGTTATCTGAGAAAATTA+AGG 0.508725 1_2:-77193945 Msa0094110:intron
CTAACATGATCAAGTAAAGT+AGG 0.518656 1_2:+77191667 None:intergenic
TGTTGCGCAACTGTATCATC+TGG 0.518786 1_2:+77203244 None:intergenic
CTTATCACTGTATTTAGACC+AGG 0.524761 1_2:+77202915 None:intergenic
ACTACACATACAGGGAGATC+AGG 0.524970 1_2:+77204067 None:intergenic
TTGTTGTGTTTGAAATAGGT+TGG 0.526405 1_2:+77192994 None:intergenic
CGAGCAGCTACTGGATGGCA+TGG 0.526948 1_2:-77191740 Msa0094110:CDS
ATTATATGCCGCCGCATCCA+TGG 0.527906 1_2:+77191630 None:intergenic
GCCAAATTAACCTTCTGAGC+AGG 0.534636 1_2:+77203065 None:intergenic
TCCATATGATGTCCCCAAAA+CGG 0.540143 1_2:+77202643 None:intergenic
ATACATAGGTATCGAGCTGA+TGG 0.540406 1_2:+77192956 None:intergenic
GCTGACAAGAGTTGCATACA+TGG 0.542970 1_2:+77194187 None:intergenic
TACTTAACAACAGAATAAGA+AGG 0.545775 1_2:+77203871 None:intergenic
TCAGCGGCGGTGGATGAGGA+TGG 0.546046 1_2:+77193159 None:intergenic
ATGTGTGTTGGCTTCAACAT+GGG 0.550656 1_2:+77204138 None:intergenic
TCCACCGCCGCTGAAAATGA+AGG 0.550734 1_2:-77193150 Msa0094110:CDS
GCTTGTGTTGTTACATGTGG+TGG 0.550930 1_2:-77202945 Msa0094110:five_prime_UTR
CCGGAGGATGACTATGACTG+TGG 0.551542 1_2:+77191899 None:intergenic
ATCGAGCTGATGGATGAAGC+TGG 0.552111 1_2:+77192966 None:intergenic
GTTGGCTTCAACATGGGAAG+TGG 0.553645 1_2:+77204144 None:intergenic
CAGAAAAGATTGAGAAAACA+AGG 0.554647 1_2:-77194085 Msa0094110:five_prime_UTR
ATTAACCTTCTGAGCAGGCC+CGG 0.555471 1_2:+77203070 None:intergenic
CACAGTCATAGTCATCCTCC+GGG 0.559092 1_2:-77191898 Msa0094110:CDS
TTCTGCTGTAGATCCAGAAA+GGG 0.561267 1_2:-77191875 Msa0094110:CDS
ATGACCACCAATAGCCCACC+TGG 0.568214 1_2:+77194113 None:intergenic
ATCTTCTGAACAAACGGCGC+CGG 0.569912 1_2:+77193123 None:intergenic
ATAGTAATAGCTGAAGGTGC+AGG 0.572259 1_2:-77194052 Msa0094110:CDS
CAATATCGAATCCATGGATG+CGG 0.572324 1_2:-77191641 Msa0094110:CDS
GGCTTGAAAGTTGCAGTGGT+CGG 0.573778 1_2:-77202249 Msa0094110:five_prime_UTR
TACTGGATGGCATGGAGAAG+AGG 0.574862 1_2:-77191732 Msa0094110:CDS
GAAGTCAGAAACATGTGTGT+TGG 0.575059 1_2:+77204126 None:intergenic
TAGGCGCAATATCGAATCCA+TGG 0.575915 1_2:-77191647 Msa0094110:CDS
GTTCTGCTGTAGATCCAGAA+AGG 0.579439 1_2:-77191876 Msa0094110:CDS
CTGCAGAAACATTTGTCTGA+AGG 0.579693 1_2:-77191445 Msa0094110:CDS
AGGACCAGGTGGGCTATTGG+TGG 0.581997 1_2:-77194117 Msa0094110:five_prime_UTR
AACTCTTGTCAGCCGAGATG+TGG 0.587157 1_2:-77194177 Msa0094110:five_prime_UTR
TGTGTTTGAAATAGGTTGGA+AGG 0.588259 1_2:+77192998 None:intergenic
GAGAGTGCTGAGAATGGTAT+CGG 0.590054 1_2:-77201997 Msa0094110:five_prime_UTR
TGTTTCAAGATGTTGGTCTG+TGG 0.592209 1_2:-77193964 Msa0094110:CDS
CGACGGACGATATCGTCTCA+TGG 0.592310 1_2:-77193077 Msa0094110:CDS
GCAGCATCCATTTGACTCGA+AGG 0.595016 1_2:+77193186 None:intergenic
CATGTGTGTTGGCTTCAACA+TGG 0.597004 1_2:+77204137 None:intergenic
GTATATATTCAAGTTTCGAA+AGG 0.598971 1_2:-77191158 Msa0094110:three_prime_UTR
AGCACTCTCTGCTTCCACAT+GGG 0.602058 1_2:+77202011 None:intergenic
ACATGTTTCAAATGAAGATG+AGG 0.605669 1_2:-77191473 Msa0094110:CDS
TCAAACAACAATCCACATCT+CGG 0.609279 1_2:+77194165 None:intergenic
GTCCAGGTTATTAAACGGCA+CGG 0.609349 1_2:-77191800 Msa0094110:CDS
GCTCAGGAAATTAGGAGACG+TGG 0.613375 1_2:-77202270 Msa0094110:intron
TATGCTTGTGTTGTTACATG+TGG 0.614355 1_2:-77202948 Msa0094110:five_prime_UTR
TCTGGATCTACAGCAGAACC+CGG 0.614712 1_2:+77191880 None:intergenic
GGATGACTATGACTGTGGAT+AGG 0.617132 1_2:+77191904 None:intergenic
AGCCATTAATTCTGCCCATG+TGG 0.621441 1_2:-77202025 Msa0094110:five_prime_UTR
TCCTGAAGAATATACACTGT+AGG 0.623219 1_2:-77191930 Msa0094110:CDS
ATGGTTATAGTAATAGCTGA+AGG 0.630661 1_2:-77194058 Msa0094110:CDS
TGTTAACAAGTTGTGTTGCA+AGG 0.631628 1_2:-77191318 Msa0094110:three_prime_UTR
CAGACAAGAACTGAAAGACC+AGG 0.634076 1_2:-77191406 Msa0094110:CDS
TATCGAATCCATGGATGCGG+CGG 0.638808 1_2:-77191638 Msa0094110:CDS
GAGAACGTAAGCGAATTCCA+GGG 0.643353 1_2:+77193020 None:intergenic
AAGTTCATATCTGAGACAGA+TGG 0.645901 1_2:+77191517 None:intergenic
GTTGACAGCATTCAGGATCG+AGG 0.646943 1_2:-77202599 Msa0094110:five_prime_UTR
GAAGCAGAGAGTGCTGAGAA+TGG 0.651200 1_2:-77202003 Msa0094110:five_prime_UTR
ACGTGGCTTGAAAGTTGCAG+TGG 0.653130 1_2:-77202253 Msa0094110:five_prime_UTR
AACGATATTCACAAACGTGG+TGG 0.655193 1_2:-77202668 Msa0094110:five_prime_UTR
AAGCTAATGGGACGTTGCAG+TGG 0.655916 1_2:-77201967 Msa0094110:intron
AGGCTGTTCAGAAAATGAAG+AGG 0.658976 1_2:-77191386 Msa0094110:CDS
TTTACCTTGAAGGACCAGGT+GGG 0.665911 1_2:-77194127 Msa0094110:five_prime_UTR
AGAACGTAAGCGAATTCCAG+GGG 0.674620 1_2:+77193021 None:intergenic
GTCAACGATATTCACAAACG+TGG 0.701280 1_2:-77202671 Msa0094110:five_prime_UTR
GCTGCTGAAACTGAAACCTG+CGG 0.702729 1_2:-77204199 Msa0094110:five_prime_UTR
TCAGAAGATGTATGACATGG+TGG 0.705908 1_2:-77193109 Msa0094110:CDS
CATGGTGGATGATTCCGCGA+CGG 0.706453 1_2:-77193094 Msa0094110:CDS
GGAAGTGGAAGAATCTACCA+TGG 0.708737 1_2:+77204159 None:intergenic
ACCGCCGCTGAAAATGAAGG+AGG 0.719377 1_2:-77193147 Msa0094110:CDS
TAACAAGTTGTGTTGCAAGG+TGG 0.722249 1_2:-77191315 Msa0094110:three_prime_UTR
TGTTCAGAAGATGTATGACA+TGG 0.734293 1_2:-77193112 Msa0094110:CDS
GGATCTACAGCAGAACCCGG+AGG 0.744225 1_2:+77191883 None:intergenic
GGTATGTAATCAGACAAGTG+AGG 0.744667 1_2:+77204088 None:intergenic
TGAGACGATATCGTCCGTCG+CGG 0.744820 1_2:+77193080 None:intergenic
GAACGTAAGCGAATTCCAGG+GGG 0.753677 1_2:+77193022 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATACATAAAAACTA+AGG + chr1_2:77197267-77197286 None:intergenic 10.0%
!!! TTATTTTTATTCATGATTAT+TGG - chr1_2:77198085-77198104 Msa0094110:intron 10.0%
!! TTATTATATTTATGTAGTTA+AGG - chr1_2:77198242-77198261 Msa0094110:intron 10.0%
!! TATTATATTTATGTAGTTAA+GGG - chr1_2:77198243-77198262 Msa0094110:intron 10.0%
!!! ATATTCTTTTAAAGATTTAA+TGG - chr1_2:77198440-77198459 Msa0094110:intron 10.0%
!! AAATGATAAATAATTGTTTA+TGG - chr1_2:77198499-77198518 Msa0094110:intron 10.0%
!! AATGATAAATAATTGTTTAT+GGG - chr1_2:77198500-77198519 Msa0094110:intron 10.0%
!!! TTTTTAAAATCTAAACTAAA+AGG + chr1_2:77200171-77200190 None:intergenic 10.0%
!! AAAACTTATTTATAATTTGA+AGG + chr1_2:77200465-77200484 None:intergenic 10.0%
!!! AAATCTCATTTTATATTTTA+GGG + chr1_2:77200522-77200541 None:intergenic 10.0%
!!! AAAATCTCATTTTATATTTT+AGG + chr1_2:77200523-77200542 None:intergenic 10.0%
!!! AAAATTTTTTGTTTTGTTTT+TGG - chr1_2:77200554-77200573 Msa0094110:intron 10.0%
!!! TGATTTTGATATAAATAATT+GGG + chr1_2:77200848-77200867 None:intergenic 10.0%
!!! AAGTAATTTAATTTAATTAG+TGG - chr1_2:77201459-77201478 Msa0094110:intron 10.0%
!! CAATATGTAAAAAATTTATT+TGG - chr1_2:77201560-77201579 Msa0094110:intron 10.0%
!! TTACAAAAAAGAAAAAATAA+AGG + chr1_2:77201615-77201634 None:intergenic 10.0%
!!! TTATTTTTAATCACAATTAT+TGG - chr1_2:77202507-77202526 Msa0094110:intron 10.0%
!! TTATTATATTTATGTAGTTA+AGG - chr1_2:77198242-77198261 Msa0094110:intron 10.0%
!! TATTATATTTATGTAGTTAA+GGG - chr1_2:77198243-77198262 Msa0094110:intron 10.0%
!! TAAAATAACGTATAGAATAA+GGG - chr1_2:77191936-77191955 Msa0094110:CDS 15.0%
!! AAAGTTACATAAATAAGTAA+AGG + chr1_2:77192516-77192535 None:intergenic 15.0%
!! TATTTAAACATAGTTAATGA+AGG - chr1_2:77193190-77193209 Msa0094110:CDS 15.0%
!!! AATAAATAAGGGTATAATAA+TGG - chr1_2:77195312-77195331 Msa0094110:intron 15.0%
!!! ATAAATAAGGGTATAATAAT+GGG - chr1_2:77195313-77195332 Msa0094110:intron 15.0%
!!! ATTTTAAAATTTGACAGTAT+TGG - chr1_2:77195756-77195775 Msa0094110:intron 15.0%
!! TTAAACAAAATATTTGATAG+AGG + chr1_2:77195784-77195803 None:intergenic 15.0%
!!! ATTTTAAAATTTGACAGTAT+TGG - chr1_2:77195756-77195775 Msa0094110:intron 15.0%
!! TTAAACAAAATATTTGATAG+AGG + chr1_2:77195784-77195803 None:intergenic 15.0%
!! ATGGATAAACATAAAAAATA+CGG - chr1_2:77196236-77196255 Msa0094110:intron 15.0%
!!! ATCAGTAATTATTTTGATTT+AGG + chr1_2:77196738-77196757 None:intergenic 15.0%
!! AACTAAGGATTATTATTATT+TGG + chr1_2:77197685-77197704 None:intergenic 15.0%
!!! ATATATATTCTAGTTTTGAA+TGG - chr1_2:77200061-77200080 Msa0094110:intron 15.0%
!!! TTTTCAAAATCTAATCAAAA+TGG + chr1_2:77200302-77200321 None:intergenic 15.0%
!! TTATAGAAAATAGAGAAAAT+TGG - chr1_2:77200333-77200352 Msa0094110:intron 15.0%
!! ATTATAATATGAACATACAA+AGG - chr1_2:77200622-77200641 Msa0094110:intron 15.0%
!!! ACATTATTTTAAACACAAAT+TGG - chr1_2:77200706-77200725 Msa0094110:intron 15.0%
!!! AAAAAAATTTGTTTTGTCTT+TGG + chr1_2:77200742-77200761 None:intergenic 15.0%
!!! GTGATTTTGATATAAATAAT+TGG + chr1_2:77200849-77200868 None:intergenic 15.0%
!!! TAAATTCGAATGTAATTTTT+TGG - chr1_2:77201784-77201803 Msa0094110:intron 15.0%
!!! AAGTTCTTTTAAAGATTAAA+TGG - chr1_2:77203172-77203191 Msa0094110:intron 15.0%
!! ATTAAAACAACACTAAACTA+TGG + chr1_2:77191329-77191348 None:intergenic 20.0%
!!! ATTTGCAAGTATATTTTATG+TGG - chr1_2:77191483-77191502 Msa0094110:CDS 20.0%
!! AACATTTGTATCAATATTTG+AGG - chr1_2:77191508-77191527 Msa0094110:CDS 20.0%
!! ACATTTGTATCAATATTTGA+GGG - chr1_2:77191509-77191528 Msa0094110:CDS 20.0%
!! TAAGTGTTTCTTTCTAAATT+AGG + chr1_2:77191910-77191929 None:intergenic 20.0%
!! CTAAAATAACGTATAGAATA+AGG - chr1_2:77191935-77191954 Msa0094110:CDS 20.0%
!! TCACTGAATAAAAATTGTTA+TGG + chr1_2:77192000-77192019 None:intergenic 20.0%
!!! TTTTTATTCAGTGATTAAGT+TGG - chr1_2:77192006-77192025 Msa0094110:intron 20.0%
!!! AATAAGTAAAGGTGTTTAAT+TGG + chr1_2:77192505-77192524 None:intergenic 20.0%
!! ATTAATCAGGTTTATATACT+TGG - chr1_2:77192733-77192752 Msa0094110:intron 20.0%
!! GATTCAAATGATAGTAAAAT+TGG - chr1_2:77192852-77192871 Msa0094110:intron 20.0%
!!! ATATCATTATCGATTGTTTT+TGG + chr1_2:77193089-77193108 None:intergenic 20.0%
!!! TTTTTCATTTTTCAGTTGAA+TGG + chr1_2:77193163-77193182 None:intergenic 20.0%
!! ATTCAACTGAAAAATGAAAA+AGG - chr1_2:77193162-77193181 Msa0094110:CDS 20.0%
!!! TAGTATTGAAATTTATGTGT+AGG - chr1_2:77193418-77193437 Msa0094110:intron 20.0%
!!! TAAATGTTTGTTTCTATTGT+AGG - chr1_2:77194024-77194043 Msa0094110:CDS 20.0%
!!! ATTATAAATCTGAAGTACAT+TGG - chr1_2:77194070-77194089 Msa0094110:exon 20.0%
!!! TATAATAATGCCTTTAAAAC+TGG - chr1_2:77194908-77194927 Msa0094110:intron 20.0%
!! CTCTAAATTATAATCGTTTA+AGG - chr1_2:77195169-77195188 Msa0094110:intron 20.0%
!!! ATTAATTGTGTTGATTTCAA+TGG - chr1_2:77195217-77195236 Msa0094110:intron 20.0%
!! TGGATGAAATTCAATAAATA+AGG - chr1_2:77195300-77195319 Msa0094110:intron 20.0%
!! GGATGAAATTCAATAAATAA+GGG - chr1_2:77195301-77195320 Msa0094110:intron 20.0%
!!! AAAACTTTTACAATTTGCTT+CGG - chr1_2:77195459-77195478 Msa0094110:intron 20.0%
!! TAAACAAAAATTTGGTCTAA+TGG + chr1_2:77195577-77195596 None:intergenic 20.0%
!! AGGTGAAATTATTGTAATTT+AGG - chr1_2:77195678-77195697 Msa0094110:intron 20.0%
!!! AAATTTTAAAATAAGAGGAC+TGG + chr1_2:77195748-77195767 None:intergenic 20.0%
!!! CTGTCAAATTTTAAAATAAG+AGG + chr1_2:77195753-77195772 None:intergenic 20.0%
!! AGGTGAAATTATTGTAATTT+AGG - chr1_2:77195678-77195697 Msa0094110:intron 20.0%
!!! CTGTCAAATTTTAAAATAAG+AGG + chr1_2:77195753-77195772 None:intergenic 20.0%
!! ATATTACATATTATATGCAG+GGG + chr1_2:77196046-77196065 None:intergenic 20.0%
!! GATATTACATATTATATGCA+GGG + chr1_2:77196047-77196066 None:intergenic 20.0%
!!! AGTTTGTTTTGGTAAAAAAT+TGG + chr1_2:77196179-77196198 None:intergenic 20.0%
!!! GATATAAGTTAAGTTTGTTT+TGG + chr1_2:77196190-77196209 None:intergenic 20.0%
!!! AGTTTAAAATTCGACAATTT+TGG + chr1_2:77196483-77196502 None:intergenic 20.0%
!!! AAATTGTCGAATTTTAAACT+AGG - chr1_2:77196483-77196502 Msa0094110:intron 20.0%
!!! ATTTCTAATCATTTGAGTTT+TGG - chr1_2:77196711-77196730 Msa0094110:intron 20.0%
!! AATCAAAATAATTACTGATG+TGG - chr1_2:77196739-77196758 Msa0094110:intron 20.0%
!! CTAAACAACAAAATAGAATA+AGG + chr1_2:77197074-77197093 None:intergenic 20.0%
!!! CTTATTCTATTTTGTTGTTT+AGG - chr1_2:77197072-77197091 Msa0094110:intron 20.0%
!! TTATTCATGATTATTGGATA+TGG - chr1_2:77198091-77198110 Msa0094110:intron 20.0%
!! ATGAATCAAATGAATTAAGA+AGG - chr1_2:77198138-77198157 Msa0094110:intron 20.0%
!!! TTGATATCTAAGTTTTAGAT+AGG - chr1_2:77198322-77198341 Msa0094110:intron 20.0%
!!! TGATATCTAAGTTTTAGATA+GGG - chr1_2:77198323-77198342 Msa0094110:intron 20.0%
!! AATGGTAAATCATTATAAGA+AGG - chr1_2:77198458-77198477 Msa0094110:intron 20.0%
!!! GTTTTAATGTTTTACATGTT+TGG - chr1_2:77200196-77200215 Msa0094110:intron 20.0%
!! ATAGAGAAAATTGGAATTTA+TGG - chr1_2:77200342-77200361 Msa0094110:intron 20.0%
!!! TCAAAATTTGCTGTATTATT+GGG + chr1_2:77200492-77200511 None:intergenic 20.0%
!!! ATCAAAATTTGCTGTATTAT+TGG + chr1_2:77200493-77200512 None:intergenic 20.0%
!!! ACAAAACAAAAAATTTTGTG+AGG + chr1_2:77200551-77200570 None:intergenic 20.0%
!! AGTCAAAATTATATCCATTA+AGG + chr1_2:77200581-77200600 None:intergenic 20.0%
!!! ACAAAACAAATTTTTTTGTG+AGG - chr1_2:77200745-77200764 Msa0094110:intron 20.0%
!!! ACATTCTGTTTTATATTTGA+TGG - chr1_2:77200774-77200793 Msa0094110:intron 20.0%
!! TCAAAATTCACTATATTTGT+AGG - chr1_2:77200804-77200823 Msa0094110:intron 20.0%
!! CAAAATTCACTATATTTGTA+GGG - chr1_2:77200805-77200824 Msa0094110:intron 20.0%
!!! TTAATCTATAACAAGAGTAT+TGG - chr1_2:77200876-77200895 Msa0094110:intron 20.0%
!!! AATCAACTAAGGATTATTTT+AGG + chr1_2:77202045-77202064 None:intergenic 20.0%
!! TTAATCACAATTATTGGATA+TGG - chr1_2:77202513-77202532 Msa0094110:intron 20.0%
!!! TAATCAATCTCTAAAGTATA+TGG + chr1_2:77202983-77203002 None:intergenic 20.0%
!!! TTAGAGACTAAATTTTAGAT+AGG - chr1_2:77203049-77203068 Msa0094110:intron 20.0%
!!! TAGAGACTAAATTTTAGATA+GGG - chr1_2:77203050-77203069 Msa0094110:intron 20.0%
!! AAATAGAAATCATGTACTTA+TGG - chr1_2:77203087-77203106 Msa0094110:five_prime_UTR 20.0%
!! TTAAATGGTAAATCATTCAA+AGG - chr1_2:77203187-77203206 Msa0094110:intron 20.0%
!! GGAATTTAGAAAAATTGATT+CGG - chr1_2:77203307-77203326 Msa0094110:intron 20.0%
!! AATAAAAACTACATAGTCAA+AGG + chr1_2:77204204-77204223 None:intergenic 20.0%
! AAAAAGCAAAAAACAAACCA+TGG - chr1_2:77191132-77191151 Msa0094110:three_prime_UTR 25.0%
! AAAAAGTTACTACACATACA+GGG + chr1_2:77191252-77191271 None:intergenic 25.0%
! TAAGAAGGATTATCTTGTAA+TGG + chr1_2:77191425-77191444 None:intergenic 25.0%
! TACTTAACAACAGAATAAGA+AGG + chr1_2:77191440-77191459 None:intergenic 25.0%
!! CAATATTTGAGGGATAATTT+TGG - chr1_2:77191519-77191538 Msa0094110:CDS 25.0%
! TTTACAGATTATAGCATAAG+CGG - chr1_2:77191565-77191584 Msa0094110:CDS 25.0%
! CATGCAAAATAAGCTAAAAT+TGG - chr1_2:77191708-77191727 Msa0094110:CDS 25.0%
! TGCATAAAAATAGTTCAAGA+GGG - chr1_2:77192199-77192218 Msa0094110:intron 25.0%
! AAATATGATCTAGATTCTAG+TGG - chr1_2:77192545-77192564 Msa0094110:intron 25.0%
! CAAATGATAGTAAAATTGGT+TGG - chr1_2:77192856-77192875 Msa0094110:intron 25.0%
!! AATCTCTGACTAAAACATTT+TGG - chr1_2:77192935-77192954 Msa0094110:intron 25.0%
! AATACTATGTCTATACCATT+AGG + chr1_2:77193405-77193424 None:intergenic 25.0%
! TATTGAAATTTATGTGTAGG+TGG - chr1_2:77193421-77193440 Msa0094110:intron 25.0%
! GTGGTTATCTCATAAAATTA+AGG - chr1_2:77193936-77193955 Msa0094110:intron 25.0%
!! CACATTGACTATAATAGTAA+GGG + chr1_2:77193981-77194000 None:intergenic 25.0%
!! ACACATTGACTATAATAGTA+AGG + chr1_2:77193982-77194001 None:intergenic 25.0%
!! CATGATTTTGTCAAATTTGT+TGG + chr1_2:77194467-77194486 None:intergenic 25.0%
! CAACAAATTTGACAAAATCA+TGG - chr1_2:77194465-77194484 Msa0094110:intron 25.0%
!! GTATTTGAGATATCAAATGT+AGG + chr1_2:77194597-77194616 None:intergenic 25.0%
! CTATATTTACAAACTTCTTC+TGG - chr1_2:77195013-77195032 Msa0094110:intron 25.0%
! ATTATAATTTAGAGACGAGT+AGG + chr1_2:77195163-77195182 None:intergenic 25.0%
!! TTTACTATTTTCTAGACCTT+CGG - chr1_2:77195431-77195450 Msa0094110:intron 25.0%
!! AACGCTTTTATGTTAAACAT+AGG - chr1_2:77195658-77195677 Msa0094110:intron 25.0%
!! AACGCTTTTATGTTAAACAT+AGG - chr1_2:77195658-77195677 Msa0094110:intron 25.0%
! GGATATTACATATTATATGC+AGG + chr1_2:77196048-77196067 None:intergenic 25.0%
!!! TTGATATGTTTTAATTGTCG+TGG + chr1_2:77196424-77196443 None:intergenic 25.0%
! TCAACTAAACCATATTTGAA+AGG + chr1_2:77196649-77196668 None:intergenic 25.0%
!!! TTTTGGAAAGATTAGTAAGT+CGG + chr1_2:77196681-77196700 None:intergenic 25.0%
!! TAGAAATTGCAGAGAAATTT+TGG + chr1_2:77196698-77196717 None:intergenic 25.0%
! AAGAACATTAAGGGTAAAAA+TGG + chr1_2:77196849-77196868 None:intergenic 25.0%
! TAATGGTCTAAGAACATTAA+GGG + chr1_2:77196858-77196877 None:intergenic 25.0%
!!! TTTGAATTGATTTGTTGTGT+TGG - chr1_2:77197096-77197115 Msa0094110:intron 25.0%
!!! TTGAATTGATTTGTTGTGTT+GGG - chr1_2:77197097-77197116 Msa0094110:intron 25.0%
! GGTTATAGACAAAAATTACA+AGG + chr1_2:77197339-77197358 None:intergenic 25.0%
!!! AAATGGAATTATTTTGGATC+TGG + chr1_2:77197360-77197379 None:intergenic 25.0%
!! CAGCAAAAATGGAATTATTT+TGG + chr1_2:77197366-77197385 None:intergenic 25.0%
! ATGTAATTAGGACCAAATTT+GGG - chr1_2:77197593-77197612 Msa0094110:intron 25.0%
!! GAAATTGTTGTGTTTGAAAT+AGG + chr1_2:77197959-77197978 None:intergenic 25.0%
! TGAAAATGAGATACATACAT+AGG + chr1_2:77198007-77198026 None:intergenic 25.0%
! GGAGAATAAATGAATTAAGA+AGG + chr1_2:77198038-77198057 None:intergenic 25.0%
! ATTGTGTCTTAATCGAATTT+CGG - chr1_2:77198062-77198081 Msa0094110:intron 25.0%
!! TAACCAATGTCTAAAGTATA+TGG + chr1_2:77198225-77198244 None:intergenic 25.0%
! TAGTTTAGAGACTAAATTGA+TGG - chr1_2:77198287-77198306 Msa0094110:intron 25.0%
! AAATAGAAATCATGCACTTA+TGG - chr1_2:77198351-77198370 Msa0094110:intron 25.0%
! AAATCATTATAAGAAGGTTG+TGG - chr1_2:77198464-77198483 Msa0094110:intron 25.0%
! AAATAATTGTTTATGGGTGT+AGG - chr1_2:77198506-77198525 Msa0094110:intron 25.0%
!! TTTATGTGTGCTTTATTATC+AGG - chr1_2:77198549-77198568 Msa0094110:intron 25.0%
!! TTATGTGTGCTTTATTATCA+GGG - chr1_2:77198550-77198569 Msa0094110:intron 25.0%
!!! ACATTTTTCAAATGAAAACG+AGG - chr1_2:77199143-77199162 Msa0094110:intron 25.0%
! ACAAAGGTTGAACATAATAA+AGG - chr1_2:77200638-77200657 Msa0094110:intron 25.0%
! CAAAGGTTGAACATAATAAA+GGG - chr1_2:77200639-77200658 Msa0094110:intron 25.0%
! AACATAATAAAGGGACATAA+CGG - chr1_2:77200648-77200667 Msa0094110:intron 25.0%
! TTAAACACAAATTGGTCATT+AGG - chr1_2:77200714-77200733 Msa0094110:intron 25.0%
! TAAACACAAATTGGTCATTA+GGG - chr1_2:77200715-77200734 Msa0094110:intron 25.0%
! AATAAAACCAATTGATGAAG+TGG - chr1_2:77200930-77200949 Msa0094110:intron 25.0%
! AAAGCAGTGTTTGAAAAATT+TGG + chr1_2:77200995-77201014 None:intergenic 25.0%
! AAAGTTTATCCTTACCATTA+TGG - chr1_2:77201397-77201416 Msa0094110:intron 25.0%
!! AAACAATGTATTGACCATAA+TGG + chr1_2:77201414-77201433 None:intergenic 25.0%
! TAACGAAGTTGAATGATAAT+CGG + chr1_2:77201678-77201697 None:intergenic 25.0%
! ACGTTTAATGTTGAGTTATT+GGG + chr1_2:77201919-77201938 None:intergenic 25.0%
! CTTTAATGAAAAGAGAGTAA+TGG - chr1_2:77201962-77201981 Msa0094110:intron 25.0%
!! GAAATTGTTGTGTTTGAAAT+AGG + chr1_2:77197959-77197978 None:intergenic 25.0%
! AACTGGAGAATAAATTAACA+AGG + chr1_2:77202390-77202409 None:intergenic 25.0%
!!! AGCTATTTTTATAGCAAATC+CGG - chr1_2:77202776-77202795 Msa0094110:intron 25.0%
! TAGTTCAAATACTAAACTGA+TGG + chr1_2:77202810-77202829 None:intergenic 25.0%
!! TGAAGCATTTCAAATACTTT+AGG + chr1_2:77202884-77202903 None:intergenic 25.0%
! GATAGATTTCATATACTGTA+GGG + chr1_2:77202914-77202933 None:intergenic 25.0%
! TGATAGATTTCATATACTGT+AGG + chr1_2:77202915-77202934 None:intergenic 25.0%
!! TAAATTTTAGATAGGGACAT+AGG - chr1_2:77203057-77203076 Msa0094110:intron 25.0%
!! AAATTTTAGATAGGGACATA+GGG - chr1_2:77203058-77203077 Msa0094110:intron 25.0%
! ATGGCAATGATTGAAAATTA+AGG - chr1_2:77203106-77203125 Msa0094110:five_prime_UTR 25.0%
! ATGGCTTAAATGATTGTTTA+TGG - chr1_2:77203221-77203240 Msa0094110:intron 25.0%
! TGGCTTAAATGATTGTTTAT+GGG - chr1_2:77203222-77203241 Msa0094110:intron 25.0%
! TGTTATGGTAAAATCTGTTA+TGG - chr1_2:77203259-77203278 Msa0094110:five_prime_UTR 25.0%
!! TTTATGTGTGCTTTATTATC+AGG - chr1_2:77198549-77198568 Msa0094110:intron 25.0%
! GTTTATTCGAAAATTCTTGA+TGG + chr1_2:77203754-77203773 None:intergenic 25.0%
!! ATTTTCGAATAAACTTAGAC+TGG - chr1_2:77203760-77203779 Msa0094110:intron 25.0%
! AAGTTTCAACTGTCATTATT+TGG + chr1_2:77203971-77203990 None:intergenic 25.0%
!! GTATATATTCAAGTTTCGAA+AGG - chr1_2:77204150-77204169 Msa0094110:five_prime_UTR 25.0%
GAAAAAGTTACTACACATAC+AGG + chr1_2:77191253-77191272 None:intergenic 30.0%
TTACAGATTATAGCATAAGC+GGG - chr1_2:77191566-77191585 Msa0094110:CDS 30.0%
GTTTCTTTCTAAATTAGGCT+AGG + chr1_2:77191905-77191924 None:intergenic 30.0%
AACTCAAAAACACTGAAGAA+TGG + chr1_2:77192143-77192162 None:intergenic 30.0%
GTGCATAAAAATAGTTCAAG+AGG - chr1_2:77192198-77192217 Msa0094110:intron 30.0%
!!! GTTAATTTGGCTTTTTCTTG+TGG - chr1_2:77192255-77192274 Msa0094110:intron 30.0%
TTCACTTCACATTACATATG+TGG + chr1_2:77192306-77192325 None:intergenic 30.0%
! GTGATAAGAGAATTAGTTTG+TGG - chr1_2:77192408-77192427 Msa0094110:intron 30.0%
! TATGGAGTGCAAAAAGTTTT+GGG - chr1_2:77192444-77192463 Msa0094110:intron 30.0%
!!! TGCAAAAAGTTTTGGGAATA+GGG - chr1_2:77192451-77192470 Msa0094110:intron 30.0%
TAGTGGTTTGATTGAATGTA+GGG - chr1_2:77192562-77192581 Msa0094110:intron 30.0%
!! TTGACAATCTTTGGTGTTAA+AGG + chr1_2:77192622-77192641 None:intergenic 30.0%
TGAATATCGTTGACAATCTT+TGG + chr1_2:77192631-77192650 None:intergenic 30.0%
!! CAACAATCTTTGAAGTATCA+TGG + chr1_2:77192693-77192712 None:intergenic 30.0%
AATCAGGTTTATATACTTGG+AGG - chr1_2:77192736-77192755 Msa0094110:intron 30.0%
GTTTATATACTTGGAGGATT+TGG - chr1_2:77192742-77192761 Msa0094110:intron 30.0%
GTGTTAATGAACTTCAGTTA+TGG - chr1_2:77192885-77192904 Msa0094110:intron 30.0%
GTTTATTTGCTCAGGAAATT+AGG - chr1_2:77193030-77193049 Msa0094110:CDS 30.0%
TCGATAATGATATTCCTGTA+AGG - chr1_2:77193096-77193115 Msa0094110:CDS 30.0%
GGTTGTTATGTATCTGAATT+AGG - chr1_2:77193211-77193230 Msa0094110:CDS 30.0%
TAGGTTATTGACAAGTCAAT+TGG - chr1_2:77193230-77193249 Msa0094110:intron 30.0%
GTAAGCTTCATTCATTCTTA+CGG - chr1_2:77193363-77193382 Msa0094110:intron 30.0%
AATATACAACCTTAGCCTAA+TGG - chr1_2:77193387-77193406 Msa0094110:intron 30.0%
CTCATGAAATCATATTGAAC+TGG + chr1_2:77193493-77193512 None:intergenic 30.0%
! GCACTAATGATTAGTTGTTA+TGG - chr1_2:77193652-77193671 Msa0094110:intron 30.0%
ATGGTTATAGTAATAGCTGA+AGG - chr1_2:77193823-77193842 Msa0094110:intron 30.0%
ACATTATCAGATGCATTACT+TGG + chr1_2:77194205-77194224 None:intergenic 30.0%
TGCAGTTCAATCAAAATGAA+GGG + chr1_2:77194621-77194640 None:intergenic 30.0%
TTGCAGTTCAATCAAAATGA+AGG + chr1_2:77194622-77194641 None:intergenic 30.0%
! CAAAATAACATTTTCGCGTA+AGG + chr1_2:77194698-77194717 None:intergenic 30.0%
CTCTTATGAATTGTAGTTAG+TGG - chr1_2:77195266-77195285 Msa0094110:intron 30.0%
AGTTAGTGGAGTAAATAAGT+TGG - chr1_2:77195280-77195299 Msa0094110:intron 30.0%
AAGAGACAATTATTGTGAGA+CGG - chr1_2:77195400-77195419 Msa0094110:intron 30.0%
!! GTAAAAGTTTTATGAACCGA+AGG + chr1_2:77195450-77195469 None:intergenic 30.0%
! TACACATGTTTTATCAGCTA+CGG - chr1_2:77195485-77195504 Msa0094110:intron 30.0%
! TCCTTTTCTTTTCTTCCATT+TGG - chr1_2:77195524-77195543 Msa0094110:intron 30.0%
! CCTTTTCTTTTCTTCCATTT+GGG - chr1_2:77195525-77195544 Msa0094110:intron 30.0%
TTTAGGCTTAATTGTTGAGT+TGG - chr1_2:77195695-77195714 Msa0094110:intron 30.0%
TTTAGGCTTAATTGTTGAGT+TGG - chr1_2:77195695-77195714 Msa0094110:intron 30.0%
AAACAATGCTCAATACAAGA+TGG - chr1_2:77196217-77196236 Msa0094110:intron 30.0%
!! ACTTTGAGGTGAAGTTTATT+AGG + chr1_2:77196321-77196340 None:intergenic 30.0%
AATAAACTTCACCTCAAAGT+TGG - chr1_2:77196321-77196340 Msa0094110:intron 30.0%
AAGAGATTGAGCAATAATAG+AGG - chr1_2:77196350-77196369 Msa0094110:intron 30.0%
TGTAAAATTCAGATTCTCCA+TGG - chr1_2:77196382-77196401 Msa0094110:intron 30.0%
! TTGTCGAATTTTAAACTAGG+AGG - chr1_2:77196486-77196505 Msa0094110:intron 30.0%
GTCTATAGTCCTTTCAAATA+TGG - chr1_2:77196637-77196656 Msa0094110:intron 30.0%
TTTGGAAAGATTAGTAAGTC+GGG + chr1_2:77196680-77196699 None:intergenic 30.0%
GTAATGGTCTAAGAACATTA+AGG + chr1_2:77196859-77196878 None:intergenic 30.0%
!!! ATGTATTGGTCTTTTCGTAA+TGG + chr1_2:77196875-77196894 None:intergenic 30.0%
!!! TGGTTTTATTACGCGTAAAA+TGG - chr1_2:77197470-77197489 Msa0094110:intron 30.0%
GATGTAATTAGGACCAAATT+TGG - chr1_2:77197592-77197611 Msa0094110:intron 30.0%
! TGTTGTGTTTGAAATAGGTT+GGG + chr1_2:77197954-77197973 None:intergenic 30.0%
! TTGTTGTGTTTGAAATAGGT+TGG + chr1_2:77197955-77197974 None:intergenic 30.0%
TTCGATTAAGACACAATCAA+TGG + chr1_2:77198059-77198078 None:intergenic 30.0%
TTAAGAAGGAAGTGATAATC+CGG - chr1_2:77198152-77198171 Msa0094110:intron 30.0%
TCTCTAACATCTTAATAGCA+GGG - chr1_2:77198183-77198202 Msa0094110:intron 30.0%
ATGCCATATACTTTAGACAT+TGG - chr1_2:77198219-77198238 Msa0094110:intron 30.0%
ATGGCAATGATTGAAAACTA+AGG - chr1_2:77198370-77198389 Msa0094110:intron 30.0%
!! GTGTAGGTTTTAATCTGTTA+TGG - chr1_2:77198522-77198541 Msa0094110:intron 30.0%
GGGATTTCGAAAAAAAGATT+CGG - chr1_2:77198570-77198589 Msa0094110:intron 30.0%
!! TTTTGAAGAATATACACCGT+AGG - chr1_2:77198641-77198660 Msa0094110:intron 30.0%
! CTCGAGAAAATTTTTCTCTT+GGG + chr1_2:77198752-77198771 None:intergenic 30.0%
! ACTCGAGAAAATTTTTCTCT+TGG + chr1_2:77198753-77198772 None:intergenic 30.0%
! TGTGTTAAACTTCTTTGAGA+AGG - chr1_2:77198870-77198889 Msa0094110:intron 30.0%
TTAAGACGATCAACAAAAGT+AGG + chr1_2:77198907-77198926 None:intergenic 30.0%
AATCATAGCAATTTCAGTCT+GGG - chr1_2:77199027-77199046 Msa0094110:intron 30.0%
GTTTATTCGAGAAATCTTGA+TGG + chr1_2:77199068-77199087 None:intergenic 30.0%
ATTCAACAGGAATTCATACT+CGG - chr1_2:77199419-77199438 Msa0094110:intron 30.0%
AATTTCTTGACAGTCTATCT+GGG + chr1_2:77199454-77199473 None:intergenic 30.0%
AATTTCAGATTCTTTACCAC+TGG + chr1_2:77199505-77199524 None:intergenic 30.0%
! AGTGGTAAAGAATCTGAAAT+TGG - chr1_2:77199504-77199523 Msa0094110:intron 30.0%
! AACAAGTCATTCACTCTTTT+TGG + chr1_2:77199621-77199640 None:intergenic 30.0%
!!! AAAGAGTGAATGACTTGTTT+TGG - chr1_2:77199622-77199641 Msa0094110:intron 30.0%
!!! AAGAGTGAATGACTTGTTTT+GGG - chr1_2:77199623-77199642 Msa0094110:intron 30.0%
ATCCAGTAACATCAAGAATA+TGG - chr1_2:77199755-77199774 Msa0094110:intron 30.0%
ATCCATATTCTTGATGTTAC+TGG + chr1_2:77199760-77199779 None:intergenic 30.0%
TAAGAGCTTGAATATCTAGA+AGG + chr1_2:77199979-77199998 None:intergenic 30.0%
!!! TAGTTTTGAATGGTTTTCAC+AGG - chr1_2:77200071-77200090 Msa0094110:intron 30.0%
TCAAATAGCTATACAGTTGT+TGG - chr1_2:77200144-77200163 Msa0094110:intron 30.0%
CAAATAGCTATACAGTTGTT+GGG - chr1_2:77200145-77200164 Msa0094110:intron 30.0%
!! TCATTCAAGTTGAAAAACTG+TGG + chr1_2:77200416-77200435 None:intergenic 30.0%
!!! GTTTTGTTTTTGGTCCTTAA+TGG - chr1_2:77200564-77200583 Msa0094110:intron 30.0%
ACATAATAAAGGGACATAAC+GGG - chr1_2:77200649-77200668 Msa0094110:intron 30.0%
AAATTGACCACTTCATCAAT+TGG + chr1_2:77200940-77200959 None:intergenic 30.0%
CAGAAAAGATTGAGAAAACA+AGG - chr1_2:77201223-77201242 Msa0094110:intron 30.0%
ATTGAGAAAACAAGGACATA+TGG - chr1_2:77201231-77201250 Msa0094110:intron 30.0%
ATGGTTATAGTAATAGCTGA+AGG - chr1_2:77193823-77193842 Msa0094110:intron 30.0%
GTGGTTATCTGAGAAAATTA+AGG - chr1_2:77201363-77201382 Msa0094110:intron 30.0%
! ATGTATTGACCATAATGGTA+AGG + chr1_2:77201409-77201428 None:intergenic 30.0%
! AGAATTCATCGGTGTTTATT+CGG + chr1_2:77201872-77201891 None:intergenic 30.0%
CTCTTCAAACTAGAATTCAT+CGG + chr1_2:77201883-77201902 None:intergenic 30.0%
GACGTTTAATGTTGAGTTAT+TGG + chr1_2:77201920-77201939 None:intergenic 30.0%
!! ATCCTTAGTTGATTTTTGTC+TGG - chr1_2:77202051-77202070 Msa0094110:five_prime_UTR 30.0%
TCATACATCTTCTGAACAAA+CGG + chr1_2:77202194-77202213 None:intergenic 30.0%
! TTGTTGTGTTTGAAATAGGT+TGG + chr1_2:77197955-77197974 None:intergenic 30.0%
! AAGAAGCGTATATGATTAAC+TGG + chr1_2:77202407-77202426 None:intergenic 30.0%
TAGATAGACTCCAAATTTGA+AGG + chr1_2:77202601-77202620 None:intergenic 30.0%
! TTCAAATTTGGAGTCTATCT+AGG - chr1_2:77202600-77202619 Msa0094110:five_prime_UTR 30.0%
! TCAAATTTGGAGTCTATCTA+GGG - chr1_2:77202601-77202620 Msa0094110:five_prime_UTR 30.0%
ATGGAGTGATATGAGATATA+GGG - chr1_2:77202674-77202693 Msa0094110:five_prime_UTR 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr1_2:77202700-77202719 None:intergenic 30.0%
TAAACTGATGGTTTATTCAC+CGG + chr1_2:77202798-77202817 None:intergenic 30.0%
TTGGGACTAAACTAAAGATA+GGG + chr1_2:77202836-77202855 None:intergenic 30.0%
! TTTGGGACTAAACTAAAGAT+AGG + chr1_2:77202837-77202856 None:intergenic 30.0%
TCTCTAACATCTTAATAGCA+GGG - chr1_2:77198183-77198202 Msa0094110:intron 30.0%
ATTACACACATACAAACTTC+AGG + chr1_2:77198415-77198434 None:intergenic 30.0%
AAATGATTGTTTATGGGTGT+AGG - chr1_2:77203228-77203247 Msa0094110:intron 30.0%
!! GTGTAGGTTTTAATCTGTTA+TGG - chr1_2:77198522-77198541 Msa0094110:intron 30.0%
! TTTGTCAAACTTCTTTGAGA+AGG - chr1_2:77203607-77203626 Msa0094110:intron 30.0%
CTAACATGATCAAGTAAAGT+AGG + chr1_2:77203644-77203663 None:intergenic 30.0%
CTACTTTACTTGATCATGTT+AGG - chr1_2:77203642-77203661 Msa0094110:intron 30.0%
CAATCATTACAATCTCAGTA+TGG - chr1_2:77203712-77203731 Msa0094110:intron 30.0%
TCAGATATGAACTTTGTATC+AGG - chr1_2:77203800-77203819 Msa0094110:intron 30.0%
ACATGTTTCAAATGAAGATG+AGG - chr1_2:77203835-77203854 Msa0094110:intron 30.0%
! ATTTGGATTTGCTTGATAGT+AGG + chr1_2:77203954-77203973 None:intergenic 30.0%
!!! TTGTTTTTTGCTTTTTCCGC+AGG + chr1_2:77191128-77191147 None:intergenic 35.0%
!! CACTTAGCTTTGTTCATGTT+TGG - chr1_2:77191295-77191314 Msa0094110:three_prime_UTR 35.0%
!! GGATTATCTTGTAATGGATC+AGG + chr1_2:77191419-77191438 None:intergenic 35.0%
!!! GGGATAATTTTGGCTTTGTT+TGG - chr1_2:77191529-77191548 Msa0094110:CDS 35.0%
! TTGTTTTCATAAGCTAAGCC+CGG - chr1_2:77191679-77191698 Msa0094110:CDS 35.0%
ATGTCACTAGATAAGCTCAA+AGG - chr1_2:77191819-77191838 Msa0094110:CDS 35.0%
! TGCACATGTTTTTCTACTGA+GGG + chr1_2:77191861-77191880 None:intergenic 35.0%
! ATGCACATGTTTTTCTACTG+AGG + chr1_2:77191862-77191881 None:intergenic 35.0%
CAGTAGAAAAACATGTGCAT+AGG - chr1_2:77191862-77191881 Msa0094110:CDS 35.0%
CTTCACATTACATATGTGGA+AGG + chr1_2:77192302-77192321 None:intergenic 35.0%
ATGTGAAGTGAATGTATTGC+AGG - chr1_2:77192314-77192333 Msa0094110:intron 35.0%
!!! GCAGGTATATTTTGATTCAG+AGG - chr1_2:77192332-77192351 Msa0094110:intron 35.0%
! TATGCTTGTGTTGTTACATG+TGG - chr1_2:77192360-77192379 Msa0094110:intron 35.0%
CTTATCACTGTATTTAGACC+AGG + chr1_2:77192396-77192415 None:intergenic 35.0%
TGTGGCTTATACCATATGTA+TGG - chr1_2:77192426-77192445 Msa0094110:intron 35.0%
! CTTTTTGCACTCCATACATA+TGG + chr1_2:77192440-77192459 None:intergenic 35.0%
! GTATGGAGTGCAAAAAGTTT+TGG - chr1_2:77192443-77192462 Msa0094110:intron 35.0%
!!! GTGCAAAAAGTTTTGGGAAT+AGG - chr1_2:77192450-77192469 Msa0094110:intron 35.0%
!!! GCAAAAAGTTTTGGGAATAG+GGG - chr1_2:77192452-77192471 Msa0094110:intron 35.0%
CTAGTGGTTTGATTGAATGT+AGG - chr1_2:77192561-77192580 Msa0094110:intron 35.0%
AAAGATTGTTGACAGCATTC+AGG - chr1_2:77192702-77192721 Msa0094110:intron 35.0%
! TGAAGCAGCTATGATTTTTG+AGG - chr1_2:77192774-77192793 Msa0094110:intron 35.0%
TTTAGTCAGAGATTGAACTC+AGG + chr1_2:77192929-77192948 None:intergenic 35.0%
! TGAGGTTTGTTTATTTGCTC+AGG - chr1_2:77193022-77193041 Msa0094110:CDS 35.0%
! TACAATCAAAGCATCCTTAC+AGG + chr1_2:77193113-77193132 None:intergenic 35.0%
! GAATGGCATGAAAAGCATAT+AGG + chr1_2:77193146-77193165 None:intergenic 35.0%
ATGTCTATACCATTAGGCTA+AGG + chr1_2:77193399-77193418 None:intergenic 35.0%
AATCAAACCAACCAATGAAG+TGG - chr1_2:77193529-77193548 Msa0094110:intron 35.0%
TTTGCAAAATCTGGCTGAAT+GGG + chr1_2:77193584-77193603 None:intergenic 35.0%
! TTATTAGATGTGTCATTGCG+AGG + chr1_2:77193868-77193887 None:intergenic 35.0%
ATGCATTACTTGGAATAGCA+CGG + chr1_2:77194195-77194214 None:intergenic 35.0%
AACAATTTCTGCCGTTAACT+GGG + chr1_2:77194297-77194316 None:intergenic 35.0%
TAACAATTTCTGCCGTTAAC+TGG + chr1_2:77194298-77194317 None:intergenic 35.0%
ACACGGTAACTTACATGAAA+GGG + chr1_2:77194325-77194344 None:intergenic 35.0%
GTAGCTTAAACCTAAACTTG+CGG + chr1_2:77194401-77194420 None:intergenic 35.0%
TCTAAACAGATACAATGTGG+GGG + chr1_2:77194444-77194463 None:intergenic 35.0%
GTCTAAACAGATACAATGTG+GGG + chr1_2:77194445-77194464 None:intergenic 35.0%
GGTCTAAACAGATACAATGT+GGG + chr1_2:77194446-77194465 None:intergenic 35.0%
TGGTCTAAACAGATACAATG+TGG + chr1_2:77194447-77194466 None:intergenic 35.0%
GGTAGACTGTCACAATTATT+TGG + chr1_2:77194527-77194546 None:intergenic 35.0%
TATGTGCAGCTTATAAACGA+GGG - chr1_2:77194718-77194737 Msa0094110:intron 35.0%
! TACTTTTGCTTCTTCTGTGA+TGG + chr1_2:77194827-77194846 None:intergenic 35.0%
!! AAGCAACTCACCAGTTTTAA+AGG + chr1_2:77194921-77194940 None:intergenic 35.0%
AAGAGAGATTTGCACAACAT+TGG - chr1_2:77195064-77195083 Msa0094110:intron 35.0%
AGAGAGATTTGCACAACATT+GGG - chr1_2:77195065-77195084 Msa0094110:intron 35.0%
GAAAAGAAAAGGACGCTAAA+TGG + chr1_2:77195517-77195536 None:intergenic 35.0%
CCCAAATGGAAGAAAAGAAA+AGG + chr1_2:77195528-77195547 None:intergenic 35.0%
GAGCTCACACAATTTAATTG+TGG - chr1_2:77195989-77196008 Msa0094110:intron 35.0%
TACATATTATATGCAGGGGT+CGG + chr1_2:77196042-77196061 None:intergenic 35.0%
AATTGCTCATACACTAGCTA+GGG + chr1_2:77196284-77196303 None:intergenic 35.0%
CTCTTTACATTCCAACTTTG+AGG + chr1_2:77196335-77196354 None:intergenic 35.0%
! TGTGTTATTGTTCTTGACGT+CGG + chr1_2:77197010-77197029 None:intergenic 35.0%
AAGAACAATAACACATCCAC+CGG - chr1_2:77197015-77197034 Msa0094110:intron 35.0%
AATGAAAACAGTCGAAATCC+AGG + chr1_2:77197135-77197154 None:intergenic 35.0%
! ACTGTTTTCATTACAGTAGC+AGG - chr1_2:77197143-77197162 Msa0094110:intron 35.0%
AATACAACACCCAAACATGA+AGG + chr1_2:77197229-77197248 None:intergenic 35.0%
! ATGTTTGGGTGTTGTATTTG+TGG - chr1_2:77197231-77197250 Msa0094110:intron 35.0%
AGCAACTTTAGCAGCAAAAA+TGG + chr1_2:77197377-77197396 None:intergenic 35.0%
!!! GGTAATTTTCAGGGGTATTT+TGG - chr1_2:77197431-77197450 Msa0094110:intron 35.0%
TACGCGTAAAATGGTCATTT+CGG - chr1_2:77197479-77197498 Msa0094110:intron 35.0%
TAAGTAATCACTTGCCACAT+GGG - chr1_2:77197563-77197582 Msa0094110:intron 35.0%
TAATTAGGACCAAATTTGGG+AGG - chr1_2:77197596-77197615 Msa0094110:intron 35.0%
CTTACTAATCCTCCCAAATT+TGG + chr1_2:77197608-77197627 None:intergenic 35.0%
!! ATCCTTAGTTGATTTGTGTC+TGG - chr1_2:77197695-77197714 Msa0094110:intron 35.0%
TACCAGACACAAATCAACTA+AGG + chr1_2:77197700-77197719 None:intergenic 35.0%
TCATACGTCTTCTGAACAAA+CGG + chr1_2:77197832-77197851 None:intergenic 35.0%
TGAACAACAGTTTCATCGTT+TGG - chr1_2:77197899-77197918 Msa0094110:intron 35.0%
GATGTTAGAGACTAAATTGC+CGG + chr1_2:77198174-77198193 None:intergenic 35.0%
GTCTCTAACATCTTAATAGC+AGG - chr1_2:77198182-77198201 Msa0094110:intron 35.0%
AATAGCAGGGACTAAATTGA+CGG - chr1_2:77198196-77198215 Msa0094110:intron 35.0%
TTAAGGGACTGAATTGAAGA+GGG - chr1_2:77198259-77198278 Msa0094110:intron 35.0%
CAAACTTCAAGAAGCAAATC+TGG + chr1_2:77198403-77198422 None:intergenic 35.0%
TAAGAAGGTTGTGGATCTTA+TGG - chr1_2:77198473-77198492 Msa0094110:intron 35.0%
! AAAAAAAGATTCGGAGCGTT+GGG - chr1_2:77198579-77198598 Msa0094110:intron 35.0%
! ATGCTTGTAGTTTAAGACAC+TGG + chr1_2:77198776-77198795 None:intergenic 35.0%
CAATCATAGCAATTTCAGTC+TGG - chr1_2:77199026-77199045 Msa0094110:intron 35.0%
TTTCTCGAATAAACTCAGAC+TGG - chr1_2:77199074-77199093 Msa0094110:intron 35.0%
! AAGTTCATATCTGAGACAGA+TGG + chr1_2:77199108-77199127 None:intergenic 35.0%
ATCTGTCTCAGATATGAACT+TGG - chr1_2:77199107-77199126 Msa0094110:intron 35.0%
TCAGATATGAACTTGGTATC+AGG - chr1_2:77199114-77199133 Msa0094110:intron 35.0%
! CTTCAGACAAATTTTTCTGC+AGG + chr1_2:77199173-77199192 None:intergenic 35.0%
CTGCAGAAAAATTTGTCTGA+AGG - chr1_2:77199171-77199190 Msa0094110:intron 35.0%
!! GGCATCTTTTGCTTTTAACA+TGG - chr1_2:77199266-77199285 Msa0094110:intron 35.0%
!! GCTCTAAAGATTGAAGAGTT+GGG + chr1_2:77199329-77199348 None:intergenic 35.0%
AAGCCAGAGTCAAATTTAGT+TGG + chr1_2:77199386-77199405 None:intergenic 35.0%
ATTTCTTGACAGTCTATCTG+GGG + chr1_2:77199453-77199472 None:intergenic 35.0%
CAATTTCTTGACAGTCTATC+TGG + chr1_2:77199455-77199474 None:intergenic 35.0%
CAGATAGACTGTCAAGAAAT+TGG - chr1_2:77199453-77199472 Msa0094110:intron 35.0%
CTGTCAAGAAATTGGCAATA+TGG - chr1_2:77199461-77199480 Msa0094110:intron 35.0%
AGTTTACTCAAACCGAAATG+TGG - chr1_2:77199527-77199546 Msa0094110:intron 35.0%
! ACATGGATTTGCTTGATAGT+TGG + chr1_2:77199700-77199719 None:intergenic 35.0%
!! TGCAACACTTGTTATACTAC+TGG - chr1_2:77199806-77199825 Msa0094110:intron 35.0%
GTTAACAAGTTGTGTTGCAA+AGG - chr1_2:77199875-77199894 Msa0094110:intron 35.0%
ATGCATGCTTCAGTCTAAAA+AGG + chr1_2:77199935-77199954 None:intergenic 35.0%
! TGACTCGTTCTTGACATTTT+TGG - chr1_2:77200596-77200615 Msa0094110:intron 35.0%
! GACTCGTTCTTGACATTTTT+GGG - chr1_2:77200597-77200616 Msa0094110:intron 35.0%
! TATTGCAGTCTGATTTGAAC+TGG + chr1_2:77200903-77200922 None:intergenic 35.0%
!! TGGTCAATTTCTAGTTCAAC+CGG - chr1_2:77200950-77200969 Msa0094110:intron 35.0%
TTTGAAAAATTTGGCAGGTC+CGG + chr1_2:77200986-77201005 None:intergenic 35.0%
CAGTGTTTGAAAAATTTGGC+AGG + chr1_2:77200991-77201010 None:intergenic 35.0%
TCAAACAACAATCCACATCT+CGG + chr1_2:77201146-77201165 None:intergenic 35.0%
! TCGATAGATGTGTCATTAGA+AGG + chr1_2:77201295-77201314 None:intergenic 35.0%
! AACGACTTGTTTCAAGATGT+TGG - chr1_2:77201337-77201356 Msa0094110:intron 35.0%
AAACACTCTTGGATCTATCA+AGG + chr1_2:77201718-77201737 None:intergenic 35.0%
!! TTTGGTGTCATAAACACTCT+TGG + chr1_2:77201729-77201748 None:intergenic 35.0%
TGTGTGTAAAGAATCGTGTT+TGG + chr1_2:77201747-77201766 None:intergenic 35.0%
!! CGATGAATTCTAGTTTGAAG+AGG - chr1_2:77201881-77201900 Msa0094110:intron 35.0%
TGCCAGACAAAAATCAACTA+AGG + chr1_2:77202056-77202075 None:intergenic 35.0%
TGTTCAGAAGATGTATGACA+TGG - chr1_2:77202196-77202215 Msa0094110:intron 35.0%
! TGTGTTTGAAATAGGTTGGA+AGG + chr1_2:77202313-77202332 None:intergenic 35.0%
GGAAGAGAATTGACATACAT+AGG + chr1_2:77202369-77202388 None:intergenic 35.0%
TGCTTCCTGAGATAAGAATT+AGG - chr1_2:77202571-77202590 Msa0094110:five_prime_UTR 35.0%
TTCCTGAGATAAGAATTAGG+AGG - chr1_2:77202574-77202593 Msa0094110:five_prime_UTR 35.0%
TCCTGAGATAAGAATTAGGA+GGG - chr1_2:77202575-77202594 Msa0094110:five_prime_UTR 35.0%
GACTTGAGAATCTTGAAAGA+TGG - chr1_2:77202655-77202674 Msa0094110:five_prime_UTR 35.0%
GATGGAGTGATATGAGATAT+AGG - chr1_2:77202673-77202692 Msa0094110:five_prime_UTR 35.0%
GTCTCTAACATCTTAATAGC+AGG - chr1_2:77198182-77198201 Msa0094110:intron 35.0%
AATAGCAGGGACTAAATTGA+CGG - chr1_2:77198196-77198215 Msa0094110:intron 35.0%
! TTAAGGGACTAAGTTGAAGA+GGG - chr1_2:77203017-77203036 Msa0094110:intron 35.0%
CAAACTTCAGGAAACAAATC+TGG + chr1_2:77203139-77203158 None:intergenic 35.0%
GGTAAATCATTCAAAGGTTG+TGG - chr1_2:77203193-77203212 Msa0094110:intron 35.0%
TTCAAAGGTTGTGGATCTTA+TGG - chr1_2:77203202-77203221 Msa0094110:intron 35.0%
TCCTGAAGAATATACACTGT+AGG - chr1_2:77203378-77203397 Msa0094110:intron 35.0%
TCCTACAGTGTATATTCTTC+AGG + chr1_2:77203382-77203401 None:intergenic 35.0%
TGAATCAACAAAGTTTCAGC+TGG - chr1_2:77203538-77203557 Msa0094110:intron 35.0%
! AAGTTCATATCTGAGACAGA+TGG + chr1_2:77199108-77199127 None:intergenic 35.0%
TGTTAACAAGTTGTGTTGCA+AGG - chr1_2:77199874-77199893 Msa0094110:intron 35.0%
! AAGTTTCGAAAGGTTTTCAC+AGG - chr1_2:77204160-77204179 Msa0094110:five_prime_UTR 35.0%
!! ATGTGTGTTGGCTTCAACAT+GGG + chr1_2:77191173-77191192 None:intergenic 40.0%
GAAGTCAGAAACATGTGTGT+TGG + chr1_2:77191185-77191204 None:intergenic 40.0%
! TGTTTCTGACTTCTTGCTTG+AGG - chr1_2:77191192-77191211 Msa0094110:three_prime_UTR 40.0%
GGTATGTAATCAGACAAGTG+AGG + chr1_2:77191223-77191242 None:intergenic 40.0%
!! TTATTTTGCATGAGCTCACC+GGG + chr1_2:77191700-77191719 None:intergenic 40.0%
!!! CTTATTTTGCATGAGCTCAC+CGG + chr1_2:77191701-77191720 None:intergenic 40.0%
GTGTCACAAGCGTTTATTGT+TGG - chr1_2:77191775-77191794 Msa0094110:CDS 40.0%
!! TCAAAGGCGTCAATCTAAAC+CGG - chr1_2:77191835-77191854 Msa0094110:CDS 40.0%
GATGCACATAATACTGTCTG+TGG + chr1_2:77192045-77192064 None:intergenic 40.0%
! GTTCAAGAGGGACTCTTTTT+CGG - chr1_2:77192211-77192230 Msa0094110:intron 40.0%
TGGTTTGATTGAATGTAGGG+TGG - chr1_2:77192565-77192584 Msa0094110:intron 40.0%
TGAATGTAGGGTGGATATAG+AGG - chr1_2:77192574-77192593 Msa0094110:intron 40.0%
GTCAACGATATTCACAAACG+TGG - chr1_2:77192637-77192656 Msa0094110:intron 40.0%
AACGATATTCACAAACGTGG+TGG - chr1_2:77192640-77192659 Msa0094110:intron 40.0%
TCCATATGATGTCCCCAAAA+CGG + chr1_2:77192668-77192687 None:intergenic 40.0%
!! AGCAGCTATGATTTTTGAGG+TGG - chr1_2:77192777-77192796 Msa0094110:intron 40.0%
! TCTTTTCCAGTCTTAACCTC+CGG + chr1_2:77192992-77193011 None:intergenic 40.0%
GGAAAAGACTTGTACTCATG+AGG - chr1_2:77193004-77193023 Msa0094110:CDS 40.0%
! TTTTGACACTGCTGTTGAAG+AGG - chr1_2:77193253-77193272 Msa0094110:intron 40.0%
TTCCACATGGGCAGAATTAA+TGG + chr1_2:77193288-77193307 None:intergenic 40.0%
!! TATCGGTGTTGTGAAGCTAA+TGG - chr1_2:77193328-77193347 Msa0094110:intron 40.0%
!! ATCGGTGTTGTGAAGCTAAT+GGG - chr1_2:77193329-77193348 Msa0094110:intron 40.0%
AAATCGACCACTTCATTGGT+TGG + chr1_2:77193539-77193558 None:intergenic 40.0%
CTAGAAATCGACCACTTCAT+TGG + chr1_2:77193543-77193562 None:intergenic 40.0%
GTTTGCAAAATCTGGCTGAA+TGG + chr1_2:77193585-77193604 None:intergenic 40.0%
CAAGCAGTGTTTGCAAAATC+TGG + chr1_2:77193593-77193612 None:intergenic 40.0%
! CAGATTTTGCAAACACTGCT+TGG - chr1_2:77193591-77193610 Msa0094110:intron 40.0%
CACTGAGTGTGTTAAAAACC+TGG + chr1_2:77193632-77193651 None:intergenic 40.0%
! CAGGTTTTTAACACACTCAG+TGG - chr1_2:77193630-77193649 Msa0094110:intron 40.0%
TGTTATGGTGACATTTGTGC+AGG - chr1_2:77193667-77193686 Msa0094110:intron 40.0%
TCAAACAACAGTCCACATCT+CGG + chr1_2:77193723-77193742 None:intergenic 40.0%
GAGAAAAGACTGAGAGAACA+AGG - chr1_2:77193796-77193815 Msa0094110:intron 40.0%
! ATAGTAATAGCTGAAGGTGC+AGG - chr1_2:77193829-77193848 Msa0094110:intron 40.0%
ACATCTTGAACCAAGTCATC+AGG + chr1_2:77193910-77193929 None:intergenic 40.0%
!! GATGACTTGGTTCAAGATGT+CGG - chr1_2:77193910-77193929 Msa0094110:intron 40.0%
ATAGCACGGATCATGTAAGT+AGG + chr1_2:77194181-77194200 None:intergenic 40.0%
GACACGGTAACTTACATGAA+AGG + chr1_2:77194326-77194345 None:intergenic 40.0%
GATGTAATAGCGAAGAGACA+CGG + chr1_2:77194342-77194361 None:intergenic 40.0%
! ACAAAATCATGGTGATAGCG+TGG - chr1_2:77194476-77194495 Msa0094110:intron 40.0%
ATTTGGCTAACGCTACACTT+TGG + chr1_2:77194510-77194529 None:intergenic 40.0%
!! TTCGGTTTGATGGTGAGTTT+AGG + chr1_2:77194548-77194567 None:intergenic 40.0%
GTATGTGCAGCTTATAAACG+AGG - chr1_2:77194717-77194736 Msa0094110:intron 40.0%
TTATAAACGAGGGACAGAAG+AGG - chr1_2:77194728-77194747 Msa0094110:intron 40.0%
TATAAACGAGGGACAGAAGA+GGG - chr1_2:77194729-77194748 Msa0094110:intron 40.0%
GATTGAGGATTCACAAAGCT+GGG + chr1_2:77194805-77194824 None:intergenic 40.0%
GTAGGTTTGCAAGAATCTGA+AGG + chr1_2:77195145-77195164 None:intergenic 40.0%
AGGTTTGTGCACGATTACTA+AGG - chr1_2:77195189-77195208 Msa0094110:intron 40.0%
AGACAATTATTGTGAGACGG+AGG - chr1_2:77195403-77195422 Msa0094110:intron 40.0%
GACAATTATTGTGAGACGGA+GGG - chr1_2:77195404-77195423 Msa0094110:intron 40.0%
! CTTGAAAGAGTACACCCAAA+TGG + chr1_2:77195542-77195561 None:intergenic 40.0%
!! GGTGTACTCTTTCAAGTTCA+AGG - chr1_2:77195546-77195565 Msa0094110:intron 40.0%
ACATATTATATGCAGGGGTC+GGG + chr1_2:77196041-77196060 None:intergenic 40.0%
CAATTGCTCATACACTAGCT+AGG + chr1_2:77196285-77196304 None:intergenic 40.0%
AGCTAGTGTATGAGCAATTG+TGG - chr1_2:77196285-77196304 Msa0094110:intron 40.0%
ATAGAGAGGGTGAAGAAAGA+AGG + chr1_2:77196903-77196922 None:intergenic 40.0%
TTGTGTTGAGCCTTCATGTT+TGG - chr1_2:77197216-77197235 Msa0094110:intron 40.0%
TGTGTTGAGCCTTCATGTTT+GGG - chr1_2:77197217-77197236 Msa0094110:intron 40.0%
CTCTAGCATGTACAATTCAG+TGG + chr1_2:77197310-77197329 None:intergenic 40.0%
! TTGCTGCTAAAGTTGCTGTT+CGG - chr1_2:77197380-77197399 Msa0094110:intron 40.0%
AAAAGGGAAGAAAGAAGCCA+AGG - chr1_2:77197409-77197428 Msa0094110:intron 40.0%
AAAGGGAAGAAAGAAGCCAA+GGG - chr1_2:77197410-77197429 Msa0094110:intron 40.0%
! AGAAGCCAAGGGTAATTTTC+AGG - chr1_2:77197421-77197440 Msa0094110:intron 40.0%
! GAAGCCAAGGGTAATTTTCA+GGG - chr1_2:77197422-77197441 Msa0094110:intron 40.0%
! AAGCCAAGGGTAATTTTCAG+GGG - chr1_2:77197423-77197442 Msa0094110:intron 40.0%
ATACCCCTGAAAATTACCCT+TGG + chr1_2:77197429-77197448 None:intergenic 40.0%
ACGCGTAAAATGGTCATTTC+GGG - chr1_2:77197480-77197499 Msa0094110:intron 40.0%
GTAAGTAATCACTTGCCACA+TGG - chr1_2:77197562-77197581 Msa0094110:intron 40.0%
ATGGGCGTTCAGATGTAATT+AGG - chr1_2:77197581-77197600 Msa0094110:intron 40.0%
! TTGGGAGGATTAGTAAGTAC+AGG - chr1_2:77197611-77197630 Msa0094110:intron 40.0%
! TGGGAGGATTAGTAAGTACA+GGG - chr1_2:77197612-77197631 Msa0094110:intron 40.0%
! TTCAATTGAGCCCATTTTGC+AGG - chr1_2:77197642-77197661 Msa0094110:intron 40.0%
! TCAATTGAGCCCATTTTGCA+GGG - chr1_2:77197643-77197662 Msa0094110:intron 40.0%
ATGTCTAGTCCCTGCAAAAT+GGG + chr1_2:77197655-77197674 None:intergenic 40.0%
TATGTCTAGTCCCTGCAAAA+TGG + chr1_2:77197656-77197675 None:intergenic 40.0%
TGTTCAGAAGACGTATGACA+TGG - chr1_2:77197834-77197853 Msa0094110:intron 40.0%
! TGTGTTTGAAATAGGTTGGG+AGG + chr1_2:77197951-77197970 None:intergenic 40.0%
GTTAAGGGACTGAATTGAAG+AGG - chr1_2:77198258-77198277 Msa0094110:intron 40.0%
CAAGAAGCAAATCTGGCATT+GGG + chr1_2:77198396-77198415 None:intergenic 40.0%
TCAAGAAGCAAATCTGGCAT+TGG + chr1_2:77198397-77198416 None:intergenic 40.0%
GAAAAAAAGATTCGGAGCGT+TGG - chr1_2:77198578-77198597 Msa0094110:intron 40.0%
TTCTGCTGTTGATCCAGAAA+GGG - chr1_2:77198696-77198715 Msa0094110:intron 40.0%
GGATAATTTCCAGCAGCTAT+TGG - chr1_2:77198822-77198841 Msa0094110:intron 40.0%
AATTTCCAGCAGCTATTGGA+TGG - chr1_2:77198826-77198845 Msa0094110:intron 40.0%
TATTGGATGGCATGGAGATT+AGG - chr1_2:77198839-77198858 Msa0094110:intron 40.0%
TAAGCGCAAAATCGAATCCA+TGG - chr1_2:77198924-77198943 Msa0094110:intron 40.0%
CAAAATCGAATCCATGGATG+CGG - chr1_2:77198930-77198949 Msa0094110:intron 40.0%
CGGCATGTAATAAGAAAAGG+CGG - chr1_2:77198953-77198972 Msa0094110:intron 40.0%
! ATGTTTCAGGTGCAAAAGCA+AGG + chr1_2:77199227-77199246 None:intergenic 40.0%
! TCTGCAAGCTCTAATGTTTC+AGG + chr1_2:77199240-77199259 None:intergenic 40.0%
TTAAAAGCAAAAGATGCCCC+AGG + chr1_2:77199264-77199283 None:intergenic 40.0%
!! GGCTCTAAAGATTGAAGAGT+TGG + chr1_2:77199330-77199349 None:intergenic 40.0%
TTAGAGCCAAGTAGTGAAGA+AGG - chr1_2:77199342-77199361 Msa0094110:intron 40.0%
CTATCACCTTCTTCACTACT+TGG + chr1_2:77199351-77199370 None:intergenic 40.0%
CAGAGTCAAATTTAGTTGGC+AGG + chr1_2:77199382-77199401 None:intergenic 40.0%
CTGCCAACTAAATTTGACTC+TGG - chr1_2:77199380-77199399 Msa0094110:intron 40.0%
CCTGTTGAATTCTAATGTGC+AGG + chr1_2:77199409-77199428 None:intergenic 40.0%
CCTGCACATTAGAATTCAAC+AGG - chr1_2:77199406-77199425 Msa0094110:intron 40.0%
TTGGCAATATGGCAGAATCA+AGG - chr1_2:77199472-77199491 Msa0094110:intron 40.0%
TGGCAATATGGCAGAATCAA+GGG - chr1_2:77199473-77199492 Msa0094110:intron 40.0%
AGCAAATCCATGTAATGAGC+AGG - chr1_2:77199707-77199726 Msa0094110:intron 40.0%
CATGTAATGAGCAGGAAGAA+GGG - chr1_2:77199715-77199734 Msa0094110:intron 40.0%
AACAAGTTGTGTTGCAAAGG+AGG - chr1_2:77199878-77199897 Msa0094110:intron 40.0%
!! CAATTTCTAGTTCAACCGGT+TGG - chr1_2:77200954-77200973 Msa0094110:intron 40.0%
GTTTAAAAACCTGGTCGAAC+CGG + chr1_2:77201047-77201066 None:intergenic 40.0%
TGTTTCACTGACATTTGTGC+AGG - chr1_2:77201090-77201109 Msa0094110:intron 40.0%
! ATAGTAATAGCTGAAGGTGC+AGG - chr1_2:77193829-77193848 Msa0094110:intron 40.0%
! TGTTTCAAGATGTTGGTCTG+TGG - chr1_2:77201344-77201363 Msa0094110:intron 40.0%
TCAGAAGATGTATGACATGG+TGG - chr1_2:77202199-77202218 Msa0094110:intron 40.0%
!! ATACATAGGTATCGAGCTGA+TGG + chr1_2:77202355-77202374 None:intergenic 40.0%
TGGATTGCGATAATCGTTAC+TGG - chr1_2:77202533-77202552 Msa0094110:intron 40.0%
CGATAATCGTTACTGGATTG+AGG - chr1_2:77202540-77202559 Msa0094110:five_prime_UTR 40.0%
ATTAGGAGGGCCTTCAAATT+TGG - chr1_2:77202588-77202607 Msa0094110:five_prime_UTR 40.0%
CTAGGGCAAAAACTTAGTTG+CGG - chr1_2:77202618-77202637 Msa0094110:five_prime_UTR 40.0%
TAGGGCAAAAACTTAGTTGC+GGG - chr1_2:77202619-77202638 Msa0094110:five_prime_UTR 40.0%
TATGAGATATAGGGCCTGTT+TGG - chr1_2:77202683-77202702 Msa0094110:five_prime_UTR 40.0%
! GTTAAGGGACTAAGTTGAAG+AGG - chr1_2:77203016-77203035 Msa0094110:intron 40.0%
CAGGAAACAAATCTGGCATT+GGG + chr1_2:77203132-77203151 None:intergenic 40.0%
TCAGGAAACAAATCTGGCAT+TGG + chr1_2:77203133-77203152 None:intergenic 40.0%
TTCTGCTGTAGATCCAGAAA+GGG - chr1_2:77203433-77203452 Msa0094110:intron 40.0%
! CTCGAGCGAATTTTTCTCTT+GGG + chr1_2:77203489-77203508 None:intergenic 40.0%
! ACTCGAGCGAATTTTTCTCT+TGG + chr1_2:77203490-77203509 None:intergenic 40.0%
CTCGAGTCCAGGTTATTAAA+CGG - chr1_2:77203503-77203522 Msa0094110:intron 40.0%
CAATATCGAATCCATGGATG+CGG - chr1_2:77203667-77203686 Msa0094110:intron 40.0%
! CTTCAGACAAATGTTTCTGC+AGG + chr1_2:77203865-77203884 None:intergenic 40.0%
CTGCAGAAACATTTGTCTGA+AGG - chr1_2:77203863-77203882 Msa0094110:intron 40.0%
! TCTTCATTTTCTGAACAGCC+TGG + chr1_2:77203923-77203942 None:intergenic 40.0%
AGGCTGTTCAGAAAATGAAG+AGG - chr1_2:77203922-77203941 Msa0094110:intron 40.0%
TAACAAGTTGTGTTGCAAGG+TGG - chr1_2:77203993-77204012 Msa0094110:intron 40.0%
GGAAGTGGAAGAATCTACCA+TGG + chr1_2:77191152-77191171 None:intergenic 45.0%
!! CATGTGTGTTGGCTTCAACA+TGG + chr1_2:77191174-77191193 None:intergenic 45.0%
ACTACACATACAGGGAGATC+AGG + chr1_2:77191244-77191263 None:intergenic 45.0%
TAGCATAAGCGGGAGCTTAT+AGG - chr1_2:77191576-77191595 Msa0094110:CDS 45.0%
! CATGTTTTTCTACTGAGGGC+CGG + chr1_2:77191857-77191876 None:intergenic 45.0%
TGTTGCGCAACTGTATCATC+TGG + chr1_2:77192067-77192086 None:intergenic 45.0%
AGATGATACAGTTGCGCAAC+AGG - chr1_2:77192066-77192085 Msa0094110:intron 45.0%
GCCTGCTCAGAAGGTTAATT+TGG - chr1_2:77192242-77192261 Msa0094110:intron 45.0%
GCCAAATTAACCTTCTGAGC+AGG + chr1_2:77192246-77192265 None:intergenic 45.0%
! GCTTGTGTTGTTACATGTGG+TGG - chr1_2:77192363-77192382 Msa0094110:intron 45.0%
!! AAACGTGGTGGAACCGTTTT+GGG - chr1_2:77192652-77192671 Msa0094110:intron 45.0%
!!! ACCGTTTTGGGGACATCATA+TGG - chr1_2:77192664-77192683 Msa0094110:intron 45.0%
!!! GTTTTGGGGACATCATATGG+AGG - chr1_2:77192667-77192686 Msa0094110:intron 45.0%
! TCAGGATCGAGGCATTAATC+AGG - chr1_2:77192720-77192739 Msa0094110:intron 45.0%
TGTACTTACCTCGCAAACTC+TGG - chr1_2:77192963-77192982 Msa0094110:CDS 45.0%
AGCCATTAATTCTGCCCATG+TGG - chr1_2:77193283-77193302 Msa0094110:intron 45.0%
!! GAGAGTGCTGAGAATGGTAT+CGG - chr1_2:77193311-77193330 Msa0094110:intron 45.0%
CAAAATCTGGCTGAATGGGT+TGG + chr1_2:77193580-77193599 None:intergenic 45.0%
ACTGAGAGAACAAGGACACA+TGG - chr1_2:77193804-77193823 Msa0094110:intron 45.0%
! CAAGTCATCAGGAGAAGCAT+CGG + chr1_2:77193899-77193918 None:intergenic 45.0%
AACGGCACTTTGAGCAAGTA+GGG + chr1_2:77194236-77194255 None:intergenic 45.0%
TTCACAGTTGGCCCAGTTAA+CGG - chr1_2:77194283-77194302 Msa0094110:intron 45.0%
GCTTAAACCTAAACTTGCGG+TGG + chr1_2:77194398-77194417 None:intergenic 45.0%
! GTTGTGCATGTTCGGTTTGA+TGG + chr1_2:77194558-77194577 None:intergenic 45.0%
ATGTCCACGTTGTGCATGTT+CGG + chr1_2:77194566-77194585 None:intergenic 45.0%
AGAGGGTTGTGATAACAGAC+CGG - chr1_2:77194746-77194765 Msa0094110:intron 45.0%
TTGTGATAACAGACCGGATG+TGG - chr1_2:77194752-77194771 Msa0094110:intron 45.0%
TGTGATAACAGACCGGATGT+GGG - chr1_2:77194753-77194772 Msa0094110:intron 45.0%
ATAGTAACCTTGCCCACATC+CGG + chr1_2:77194768-77194787 None:intergenic 45.0%
ATTCACAAAGCTGGGCTGAT+GGG + chr1_2:77194797-77194816 None:intergenic 45.0%
GGATTGAGGATTCACAAAGC+TGG + chr1_2:77194806-77194825 None:intergenic 45.0%
!! GCTTCTTCTGTGATGGATTG+AGG + chr1_2:77194820-77194839 None:intergenic 45.0%
GAAAAGGACGCTAAATGGAG+AGG + chr1_2:77195512-77195531 None:intergenic 45.0%
TTGTGGAGAAGTGATGTGTC+CGG - chr1_2:77196006-77196025 Msa0094110:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + chr1_2:77196040-77196059 None:intergenic 45.0%
!! ACGGTGACTAGCCTAAAAAC+AGG - chr1_2:77196255-77196274 Msa0094110:intron 45.0%
ATTCAGATTCTCCATGGCGA+TGG - chr1_2:77196388-77196407 Msa0094110:intron 45.0%
TTCAGATTCTCCATGGCGAT+GGG - chr1_2:77196389-77196408 Msa0094110:intron 45.0%
GTGGCACGTAATTAGATGTG+TGG - chr1_2:77196758-77196777 Msa0094110:intron 45.0%
TTAGATGTGTGGCAGTGACA+TGG - chr1_2:77196769-77196788 Msa0094110:intron 45.0%
GAAAGAAGGCAGGGATGTAT+TGG + chr1_2:77196889-77196908 None:intergenic 45.0%
AAGAAGGAGGATGTAATCGG+TGG + chr1_2:77196933-77196952 None:intergenic 45.0%
GGGAAGAAGGAGGATGTAAT+CGG + chr1_2:77196936-77196955 None:intergenic 45.0%
TCTCTGCCTCCAAAAACGAA+AGG - chr1_2:77196979-77196998 Msa0094110:intron 45.0%
!! GAGAAGCCTTTCGTTTTTGG+AGG + chr1_2:77196988-77197007 None:intergenic 45.0%
! TCGGAGAAGCCTTTCGTTTT+TGG + chr1_2:77196991-77197010 None:intergenic 45.0%
GCATGACGCAAAACCTTCTT+TGG - chr1_2:77197039-77197058 Msa0094110:intron 45.0%
GACGCAAAACCTTCTTTGGT+AGG - chr1_2:77197043-77197062 Msa0094110:intron 45.0%
AAGGCACAACCTACCAAAGA+AGG + chr1_2:77197055-77197074 None:intergenic 45.0%
TCGAAATCCAGGATTGCAAC+TGG + chr1_2:77197124-77197143 None:intergenic 45.0%
ATGAAGGCTCAACACAAAGC+AGG + chr1_2:77197213-77197232 None:intergenic 45.0%
! TTGCTGTTCGGACTGAGAAA+AGG - chr1_2:77197392-77197411 Msa0094110:intron 45.0%
TGCTGTTCGGACTGAGAAAA+GGG - chr1_2:77197393-77197412 Msa0094110:intron 45.0%
!! TTGGTCTTTTCTCACGTGTC+TGG - chr1_2:77197450-77197469 Msa0094110:intron 45.0%
CGCGTAAAATGGTCATTTCG+GGG - chr1_2:77197481-77197500 Msa0094110:intron 45.0%
GCGTAAAATGGTCATTTCGG+GGG - chr1_2:77197482-77197501 Msa0094110:intron 45.0%
! GGTAAGGACTTTGATGACTC+AGG + chr1_2:77197514-77197533 None:intergenic 45.0%
TTACTTACGTGGCAATGACG+TGG + chr1_2:77197550-77197569 None:intergenic 45.0%
GTGGCAAGTGATTACTTACG+TGG + chr1_2:77197561-77197580 None:intergenic 45.0%
ATTACATCTGAACGCCCATG+TGG + chr1_2:77197580-77197599 None:intergenic 45.0%
TCAGAAGACGTATGACATGG+TGG - chr1_2:77197837-77197856 Msa0094110:intron 45.0%
CGACAGATGATATCATCTCG+TGG - chr1_2:77197869-77197888 Msa0094110:intron 45.0%
ATTGAGCTGACGAATGAAGC+TGG + chr1_2:77197983-77198002 None:intergenic 45.0%
GACTGTGGATAGGTTTCCTA+CGG + chr1_2:77198660-77198679 None:intergenic 45.0%
GGATGACTATGACTGTGGAT+AGG + chr1_2:77198670-77198689 None:intergenic 45.0%
GTTCTGCTGTTGATCCAGAA+AGG - chr1_2:77198695-77198714 Msa0094110:intron 45.0%
TTCTCAAAAGCTGCCCTTTC+TGG + chr1_2:77198712-77198731 None:intergenic 45.0%
GTCAACAGCAAAGTTTCAGC+TGG - chr1_2:77198801-77198820 Msa0094110:intron 45.0%
CGGCGGCATGTAATAAGAAA+AGG - chr1_2:77198950-77198969 Msa0094110:intron 45.0%
ACATTAGAGCTTGCAGATCC+TGG - chr1_2:77199243-77199262 Msa0094110:intron 45.0%
CATTAGAGCTTGCAGATCCT+GGG - chr1_2:77199244-77199263 Msa0094110:intron 45.0%
ATTAGAGCTTGCAGATCCTG+GGG - chr1_2:77199245-77199264 Msa0094110:intron 45.0%
AAACCGAAATGTGGCTAACG+AGG - chr1_2:77199536-77199555 Msa0094110:intron 45.0%
GAACCTCGTTAGCCACATTT+CGG + chr1_2:77199542-77199561 None:intergenic 45.0%
! TCTCAATTTAGCTTCACCGC+AGG - chr1_2:77199560-77199579 Msa0094110:intron 45.0%
!!! TTCACTCTTTTTGGAGCAGC+TGG + chr1_2:77199612-77199631 None:intergenic 45.0%
! TCTTCATTTTCCGAACAGCC+TGG + chr1_2:77199669-77199688 None:intergenic 45.0%
AGGCTGTTCGGAAAATGAAG+AGG - chr1_2:77199668-77199687 Msa0094110:intron 45.0%
CCTTCTTCCTGCTCATTACA+TGG + chr1_2:77199717-77199736 None:intergenic 45.0%
CCATGTAATGAGCAGGAAGA+AGG - chr1_2:77199714-77199733 Msa0094110:intron 45.0%
GAAGAAGGGCAGTTAGTTCA+TGG - chr1_2:77199729-77199748 Msa0094110:intron 45.0%
TGCAAGACAGCATGCTCAAA+GGG + chr1_2:77199790-77199809 None:intergenic 45.0%
TTGCAAGACAGCATGCTCAA+AGG + chr1_2:77199791-77199810 None:intergenic 45.0%
AAGGCTGTCAAACAGCTAAC+TGG + chr1_2:77199960-77199979 None:intergenic 45.0%
AAAAATTTGGCAGGTCCGGT+TGG + chr1_2:77200982-77201001 None:intergenic 45.0%
GCTGACAAGAGTTGCATACA+TGG + chr1_2:77201124-77201143 None:intergenic 45.0%
TCAAGGTAAAAGGGTGACTC+TGG + chr1_2:77201171-77201190 None:intergenic 45.0%
! GAGTCACCCTTTTACCTTGA+AGG - chr1_2:77201171-77201190 Msa0094110:intron 45.0%
CCTGGTCCTTCAAGGTAAAA+GGG + chr1_2:77201180-77201199 None:intergenic 45.0%
ACCTGGTCCTTCAAGGTAAA+AGG + chr1_2:77201181-77201200 None:intergenic 45.0%
! TTTTACCTTGAAGGACCAGG+TGG - chr1_2:77201180-77201199 Msa0094110:intron 45.0%
TTTACCTTGAAGGACCAGGT+GGG - chr1_2:77201181-77201200 Msa0094110:intron 45.0%
! AAGTCGTTCGATGAAGCATC+TGG + chr1_2:77201325-77201344 None:intergenic 45.0%
! CATCGGTGTTTATTCGGTTC+TGG + chr1_2:77201866-77201885 None:intergenic 45.0%
TGTCTCTTGTCTCTGGTTGT+TGG + chr1_2:77202101-77202120 None:intergenic 45.0%
CTCTACCAACAACAGCTTTG+TGG - chr1_2:77202256-77202275 Msa0094110:five_prime_UTR 45.0%
CCAAACCACAAAGCTGTTGT+TGG + chr1_2:77202264-77202283 None:intergenic 45.0%
! CCAACAACAGCTTTGTGGTT+TGG - chr1_2:77202261-77202280 Msa0094110:five_prime_UTR 45.0%
AGAACGTAAGCGAATTCCAG+GGG + chr1_2:77202290-77202309 None:intergenic 45.0%
GAGAACGTAAGCGAATTCCA+GGG + chr1_2:77202291-77202310 None:intergenic 45.0%
GCCCTCCTAATTCTTATCTC+AGG + chr1_2:77202579-77202598 None:intergenic 45.0%
GGATGACTATGACTGTGGAT+AGG + chr1_2:77198670-77198689 None:intergenic 45.0%
GTTCTGCTGTAGATCCAGAA+AGG - chr1_2:77203432-77203451 Msa0094110:intron 45.0%
! TCCAGAAAGGGAAGCTTTAG+AGG - chr1_2:77203445-77203464 Msa0094110:intron 45.0%
!! TCCTCTAAAGCTTCCCTTTC+TGG + chr1_2:77203449-77203468 None:intergenic 45.0%
AGAAAAATTCGCTCGAGTCC+AGG - chr1_2:77203492-77203511 Msa0094110:intron 45.0%
GTCCAGGTTATTAAACGGCA+CGG - chr1_2:77203508-77203527 Msa0094110:intron 45.0%
!! AACCGTGCCGTTTAATAACC+TGG + chr1_2:77203513-77203532 None:intergenic 45.0%
TAGGCGCAATATCGAATCCA+TGG - chr1_2:77203661-77203680 Msa0094110:intron 45.0%
CAGACAAGAACTGAAAGACC+AGG - chr1_2:77203902-77203921 Msa0094110:intron 45.0%
!! TAATTATATAAACAAAAATT+TGG + chr1_2:77195585-77195604 None:intergenic 5.0%
!!! TGTTATTTTTTTTTTATTTT+TGG + chr1_2:77196582-77196601 None:intergenic 5.0%
!!! AGTTTTTTTTTTTTTTAATA+AGG + chr1_2:77200383-77200402 None:intergenic 5.0%
!!! TATTATATTTATATTGTTTT+GGG + chr1_2:77202854-77202873 None:intergenic 5.0%
!!! TTATTATATTTATATTGTTT+TGG + chr1_2:77202855-77202874 None:intergenic 5.0%
GCTGCTGAAACTGAAACCTG+CGG - chr1_2:77191109-77191128 Msa0094110:three_prime_UTR 50.0%
! GTTGGCTTCAACATGGGAAG+TGG + chr1_2:77191167-77191186 None:intergenic 50.0%
ATTAACCTTCTGAGCAGGCC+CGG + chr1_2:77192241-77192260 None:intergenic 50.0%
ACATGTGGTGGTCTTTGTCC+TGG - chr1_2:77192375-77192394 Msa0094110:intron 50.0%
!! CAAACGTGGTGGAACCGTTT+TGG - chr1_2:77192651-77192670 Msa0094110:intron 50.0%
!! AACGTGGTGGAACCGTTTTG+GGG - chr1_2:77192653-77192672 Msa0094110:intron 50.0%
GTTGACAGCATTCAGGATCG+AGG - chr1_2:77192709-77192728 Msa0094110:intron 50.0%
!! ACCTCGCAAACTCTGGAATC+CGG - chr1_2:77192970-77192989 Msa0094110:CDS 50.0%
TGGAATCCGGAGGTTAAGAC+TGG - chr1_2:77192983-77193002 Msa0094110:CDS 50.0%
GCTCAGGAAATTAGGAGACG+TGG - chr1_2:77193038-77193057 Msa0094110:CDS 50.0%
ACGTGGCTTGAAAGTTGCAG+TGG - chr1_2:77193055-77193074 Msa0094110:CDS 50.0%
GGCTTGAAAGTTGCAGTGGT+CGG - chr1_2:77193059-77193078 Msa0094110:CDS 50.0%
AGCACTCTCTGCTTCCACAT+GGG + chr1_2:77193300-77193319 None:intergenic 50.0%
!! GAAGCAGAGAGTGCTGAGAA+TGG - chr1_2:77193305-77193324 Msa0094110:intron 50.0%
AAGCTAATGGGACGTTGCAG+TGG - chr1_2:77193341-77193360 Msa0094110:intron 50.0%
GCTCGCAAGAGTTGCATACA+TGG + chr1_2:77193701-77193720 None:intergenic 50.0%
TCGAGGTAAAAGGGTGACTC+GGG + chr1_2:77193748-77193767 None:intergenic 50.0%
CTCGAGGTAAAAGGGTGACT+CGG + chr1_2:77193749-77193768 None:intergenic 50.0%
! GAGTCACCCTTTTACCTCGA+GGG - chr1_2:77193748-77193767 Msa0094110:intron 50.0%
! AATAGCTGAAGGTGCAGGTC+AGG - chr1_2:77193834-77193853 Msa0094110:intron 50.0%
CGATGCTTCTCCTGATGACT+TGG - chr1_2:77193897-77193916 Msa0094110:intron 50.0%
TGGTTCAAGATGTCGGTCTG+TGG - chr1_2:77193917-77193936 Msa0094110:intron 50.0%
GAACGGCACTTTGAGCAAGT+AGG + chr1_2:77194237-77194256 None:intergenic 50.0%
!! CTTGCTCAAAGTGCCGTTCA+TGG - chr1_2:77194238-77194257 Msa0094110:intron 50.0%
! AAGTGCCGTTCATGGTGCAA+TGG - chr1_2:77194246-77194265 Msa0094110:intron 50.0%
TCCAGCCATTGCACCATGAA+CGG + chr1_2:77194254-77194273 None:intergenic 50.0%
GGATACACAGGCTTCACAGT+TGG - chr1_2:77194271-77194290 Msa0094110:intron 50.0%
ACACATGCCACCGCAAGTTT+AGG - chr1_2:77194388-77194407 Msa0094110:intron 50.0%
CAAACCGAACATGCACAACG+TGG - chr1_2:77194559-77194578 Msa0094110:intron 50.0%
GATTCACAAAGCTGGGCTGA+TGG + chr1_2:77194798-77194817 None:intergenic 50.0%
TGTGGAGAAGTGATGTGTCC+GGG - chr1_2:77196007-77196026 Msa0094110:intron 50.0%
TGCTCATACACTAGCTAGGG+CGG + chr1_2:77196281-77196300 None:intergenic 50.0%
GTATAATCGTCCCATCGCCA+TGG + chr1_2:77196402-77196421 None:intergenic 50.0%
TGACATGGCAACAGCTGACA+GGG - chr1_2:77196784-77196803 Msa0094110:intron 50.0%
GAGGGTGAAGAAAGAAGGCA+GGG + chr1_2:77196898-77196917 None:intergenic 50.0%
AGAGGGTGAAGAAAGAAGGC+AGG + chr1_2:77196899-77196918 None:intergenic 50.0%
CGGTGGAGGAAAGATAGAGA+GGG + chr1_2:77196916-77196935 None:intergenic 50.0%
TCGGTGGAGGAAAGATAGAG+AGG + chr1_2:77196917-77196936 None:intergenic 50.0%
AAGGAGGATGTAATCGGTGG+AGG + chr1_2:77196930-77196949 None:intergenic 50.0%
!! AGGCAGAGAGCTGTTTTGTG+CGG + chr1_2:77196968-77196987 None:intergenic 50.0%
! GAAGGTTTTGCGTCATGCTC+CGG + chr1_2:77197037-77197056 None:intergenic 50.0%
! TGTGGTAGACTGGTCGTTGT+TGG + chr1_2:77197745-77197764 None:intergenic 50.0%
CATCTTGTCGTGTGGTAGAC+TGG + chr1_2:77197755-77197774 None:intergenic 50.0%
CAGTCTACCACACGACAAGA+TGG - chr1_2:77197753-77197772 Msa0094110:intron 50.0%
CTACCACACGACAAGATGGA+TGG - chr1_2:77197757-77197776 Msa0094110:intron 50.0%
GAACCCTCCTGAATTCGCTA+GGG - chr1_2:77197921-77197940 Msa0094110:intron 50.0%
GAACCCTAGCGAATTCAGGA+GGG + chr1_2:77197927-77197946 None:intergenic 50.0%
AGAACCCTAGCGAATTCAGG+AGG + chr1_2:77197928-77197947 None:intergenic 50.0%
AGGAGAACCCTAGCGAATTC+AGG + chr1_2:77197931-77197950 None:intergenic 50.0%
!! GCGTTGGGAGTTTGCTAATG+AGG - chr1_2:77198594-77198613 Msa0094110:intron 50.0%
CCACAGTCATAGTCATCCTC+CGG - chr1_2:77198672-77198691 Msa0094110:intron 50.0%
CACAGTCATAGTCATCCTCC+GGG - chr1_2:77198673-77198692 Msa0094110:intron 50.0%
TCTGGATCAACAGCAGAACC+CGG + chr1_2:77198694-77198713 None:intergenic 50.0%
AATCGAATCCATGGATGCGG+CGG - chr1_2:77198933-77198952 Msa0094110:intron 50.0%
! ATCAAGTTGCCTGCAGCAAC+AGG + chr1_2:77199003-77199022 None:intergenic 50.0%
ACAGGAATTCATACTCGGCC+AGG - chr1_2:77199424-77199443 Msa0094110:intron 50.0%
GAATCAAGGGTTAACGCCAG+TGG - chr1_2:77199486-77199505 Msa0094110:intron 50.0%
! CAATTTAGCTTCACCGCAGG+AGG - chr1_2:77199563-77199582 Msa0094110:intron 50.0%
ATGCTACCTGAATCCTCCTG+CGG + chr1_2:77199579-77199598 None:intergenic 50.0%
!! TTGGAGCAGCTGGTTTGACT+TGG + chr1_2:77199602-77199621 None:intergenic 50.0%
CAGTTCCTCACTGAAAGACC+AGG - chr1_2:77199648-77199667 Msa0094110:intron 50.0%
! AACAGCCTGGTCTTTCAGTG+AGG + chr1_2:77199656-77199675 None:intergenic 50.0%
CACTGAAAGACCAGGCTGTT+CGG - chr1_2:77199656-77199675 Msa0094110:intron 50.0%
TTCAACCGGTTGGAACCAAC+CGG - chr1_2:77200964-77200983 Msa0094110:intron 50.0%
GTTCAACCGCTTGAACTAGC+CGG - chr1_2:77201025-77201044 Msa0094110:intron 50.0%
AACTCTTGTCAGCCGAGATG+TGG - chr1_2:77201131-77201150 Msa0094110:intron 50.0%
! CCCTTTTACCTTGAAGGACC+AGG - chr1_2:77201177-77201196 Msa0094110:intron 50.0%
! AATAGCTGAAGGTGCAGGTC+AGG - chr1_2:77193834-77193853 Msa0094110:intron 50.0%
GAGACAGCCTTCGAGTCAAA+TGG - chr1_2:77202115-77202134 Msa0094110:intron 50.0%
! GCAGCATCCATTTGACTCGA+AGG + chr1_2:77202125-77202144 None:intergenic 50.0%
! ACCTCCTTCATTTTCAGCGG+CGG + chr1_2:77202165-77202184 None:intergenic 50.0%
! CGGACCTCCTTCATTTTCAG+CGG + chr1_2:77202168-77202187 None:intergenic 50.0%
CGCTGAAAATGAAGGAGGTC+CGG - chr1_2:77202166-77202185 Msa0094110:intron 50.0%
ATCTTCTGAACAAACGGCGC+CGG + chr1_2:77202188-77202207 None:intergenic 50.0%
GAACGTAAGCGAATTCCAGG+GGG + chr1_2:77202289-77202308 None:intergenic 50.0%
GGAGAACGTAAGCGAATTCC+AGG + chr1_2:77202292-77202311 None:intergenic 50.0%
! ATCGAGCTGATGGATGAAGC+TGG + chr1_2:77202345-77202364 None:intergenic 50.0%
CCACAGTCATAGTCATCCTC+CGG - chr1_2:77198672-77198691 Msa0094110:intron 50.0%
CACAGTCATAGTCATCCTCC+GGG - chr1_2:77198673-77198692 Msa0094110:intron 50.0%
TCTGGATCTACAGCAGAACC+CGG + chr1_2:77203431-77203450 None:intergenic 50.0%
!! GGATGTTTTCGAGCAGCTAC+TGG - chr1_2:77203559-77203578 Msa0094110:intron 50.0%
!! GTTTTCGAGCAGCTACTGGA+TGG - chr1_2:77203563-77203582 Msa0094110:intron 50.0%
TACTGGATGGCATGGAGAAG+AGG - chr1_2:77203576-77203595 Msa0094110:intron 50.0%
TATCGAATCCATGGATGCGG+CGG - chr1_2:77203670-77203689 Msa0094110:intron 50.0%
ATTATATGCCGCCGCATCCA+TGG + chr1_2:77203681-77203700 None:intergenic 50.0%
TCCGGATTCCAGAGTTTGCG+AGG + chr1_2:77192974-77192993 None:intergenic 55.0%
!! TCGCAAACTCTGGAATCCGG+AGG - chr1_2:77192973-77192992 Msa0094110:CDS 55.0%
CAGCACTCTCTGCTTCCACA+TGG + chr1_2:77193301-77193320 None:intergenic 55.0%
TGGCAGTTGCTAGTTCGACC+AGG - chr1_2:77193611-77193630 Msa0094110:intron 55.0%
AACTCTTGCGAGCCGAGATG+TGG - chr1_2:77193708-77193727 Msa0094110:intron 55.0%
! CGAGTCACCCTTTTACCTCG+AGG - chr1_2:77193747-77193766 Msa0094110:intron 55.0%
CCAGGTCCCTCGAGGTAAAA+GGG + chr1_2:77193757-77193776 None:intergenic 55.0%
ACCAGGTCCCTCGAGGTAAA+AGG + chr1_2:77193758-77193777 None:intergenic 55.0%
! TTTTACCTCGAGGGACCTGG+TGG - chr1_2:77193757-77193776 Msa0094110:intron 55.0%
TTTACCTCGAGGGACCTGGT+GGG - chr1_2:77193758-77193777 Msa0094110:intron 55.0%
ATGAACTCCAGAAGCCCACC+AGG + chr1_2:77193775-77193794 None:intergenic 55.0%
GGTGCAATGGCTGGATACAC+AGG - chr1_2:77194259-77194278 Msa0094110:intron 55.0%
TAACAGACCGGATGTGGGCA+AGG - chr1_2:77194758-77194777 Msa0094110:intron 55.0%
!! AAAGCTGGGCTGATGGGTTG+AGG + chr1_2:77194791-77194810 None:intergenic 55.0%
GTGGAGAAGTGATGTGTCCG+GGG - chr1_2:77196008-77196027 Msa0094110:intron 55.0%
!! AGCTAGGGCGGCCTGTTTTT+AGG + chr1_2:77196269-77196288 None:intergenic 55.0%
GTGACATGGCAACAGCTGAC+AGG - chr1_2:77196783-77196802 Msa0094110:intron 55.0%
AACAGCTGACAGGGCTAGGA+TGG - chr1_2:77196793-77196812 Msa0094110:intron 55.0%
! GTTTTGTGCGGCGGAGTTCA+GGG + chr1_2:77196956-77196975 None:intergenic 55.0%
! TGTTTTGTGCGGCGGAGTTC+AGG + chr1_2:77196957-77196976 None:intergenic 55.0%
!! CAGAGAGCTGTTTTGTGCGG+CGG + chr1_2:77196965-77196984 None:intergenic 55.0%
GTTGGGTCCAGTTGCAATCC+TGG - chr1_2:77197114-77197133 Msa0094110:intron 55.0%
TGGCACTAGCTGACTGGGTA+AGG + chr1_2:77197530-77197549 None:intergenic 55.0%
TGACGTGGCACTAGCTGACT+GGG + chr1_2:77197535-77197554 None:intergenic 55.0%
ATGACGTGGCACTAGCTGAC+TGG + chr1_2:77197536-77197555 None:intergenic 55.0%
GCACCATCCATCTTGTCGTG+TGG + chr1_2:77197763-77197782 None:intergenic 55.0%
GTCTTCTGAACAAACGGCGC+CGG + chr1_2:77197826-77197845 None:intergenic 55.0%
GGAACCCTCCTGAATTCGCT+AGG - chr1_2:77197920-77197939 Msa0094110:intron 55.0%
CCGGAGGATGACTATGACTG+TGG + chr1_2:77198675-77198694 None:intergenic 55.0%
CCATGCCATCCAATAGCTGC+TGG + chr1_2:77198834-77198853 None:intergenic 55.0%
CCAGCAGCTATTGGATGGCA+TGG - chr1_2:77198831-77198850 Msa0094110:intron 55.0%
ATTACATGCCGCCGCATCCA+TGG + chr1_2:77198944-77198963 None:intergenic 55.0%
! ACAGTCTATCTGGGGTGACC+TGG + chr1_2:77199445-77199464 None:intergenic 55.0%
! GTCGAACCGGCTAGTTCAAG+CGG + chr1_2:77201034-77201053 None:intergenic 55.0%
!! TTGAACTAGCCGGTTCGACC+AGG - chr1_2:77201035-77201054 Msa0094110:intron 55.0%
ATAGCCCACCTGGTCCTTCA+AGG + chr1_2:77201188-77201207 None:intergenic 55.0%
!! TGAAGGACCAGGTGGGCTAT+TGG - chr1_2:77201188-77201207 Msa0094110:intron 55.0%
ATGACCACCAATAGCCCACC+TGG + chr1_2:77201198-77201217 None:intergenic 55.0%
CGAAGGCTGTCTCTTGTCTC+TGG + chr1_2:77202108-77202127 None:intergenic 55.0%
! ATTTTCAGCGGCGGTGGATG+AGG + chr1_2:77202156-77202175 None:intergenic 55.0%
TCCACCGCCGCTGAAAATGA+AGG - chr1_2:77202158-77202177 Msa0094110:intron 55.0%
! TCCTTCATTTTCAGCGGCGG+TGG + chr1_2:77202162-77202181 None:intergenic 55.0%
ACCGCCGCTGAAAATGAAGG+AGG - chr1_2:77202161-77202180 Msa0094110:intron 55.0%
!! CATGGTGGATGATTCCGCGA+CGG - chr1_2:77202214-77202233 Msa0094110:intron 55.0%
TGAGACGATATCGTCCGTCG+CGG + chr1_2:77202231-77202250 None:intergenic 55.0%
CGACGGACGATATCGTCTCA+TGG - chr1_2:77202231-77202250 Msa0094110:five_prime_UTR 55.0%
! CTTTGTGGTTTGGAACCCCC+TGG - chr1_2:77202271-77202290 Msa0094110:intron 55.0%
CCGGAGGATGACTATGACTG+TGG + chr1_2:77198675-77198694 None:intergenic 55.0%
!!! GGGACTCTTTTTCGGCGTGC+CGG - chr1_2:77192219-77192238 Msa0094110:intron 60.0%
!!! GGACTCTTTTTCGGCGTGCC+GGG - chr1_2:77192220-77192239 Msa0094110:intron 60.0%
! CCCTTTTACCTCGAGGGACC+TGG - chr1_2:77193754-77193773 Msa0094110:intron 60.0%
GCCGTTCATGGTGCAATGGC+TGG - chr1_2:77194250-77194269 Msa0094110:intron 60.0%
TGGCAACAGCTGACAGGGCT+AGG - chr1_2:77196789-77196808 Msa0094110:intron 60.0%
GCGGAGTTCAGGGAAGAAGG+AGG + chr1_2:77196946-77196965 None:intergenic 60.0%
! GGTTTTGCGTCATGCTCCGG+TGG + chr1_2:77197034-77197053 None:intergenic 60.0%
CGCCGGAAACGGAGGAAATC+CGG - chr1_2:77197804-77197823 Msa0094110:intron 60.0%
CGCCGGATTTCCTCCGTTTC+CGG + chr1_2:77197809-77197828 None:intergenic 60.0%
GGATCAACAGCAGAACCCGG+AGG + chr1_2:77198691-77198710 None:intergenic 60.0%
GCTTCACCGCAGGAGGATTC+AGG - chr1_2:77199570-77199589 Msa0094110:intron 60.0%
! CAGGTCCGGTTGGTTCCAAC+CGG + chr1_2:77200972-77200991 None:intergenic 60.0%
!! AGGACCAGGTGGGCTATTGG+TGG - chr1_2:77201191-77201210 Msa0094110:intron 60.0%
GGATCTACAGCAGAACCCGG+AGG + chr1_2:77203428-77203447 None:intergenic 60.0%
CGAGCAGCTACTGGATGGCA+TGG - chr1_2:77203568-77203587 Msa0094110:intron 60.0%
GCGGCGGAGTTCAGGGAAGA+AGG + chr1_2:77196949-77196968 None:intergenic 65.0%
GGTGCGCCGCTATCCTCATC+TGG - chr1_2:77197778-77197797 Msa0094110:intron 65.0%
GCGCCGCTATCCTCATCTGG+CGG - chr1_2:77197781-77197800 Msa0094110:intron 65.0%
GCGCCGCCAGATGAGGATAG+CGG + chr1_2:77197787-77197806 None:intergenic 65.0%
CTATCCTCATCTGGCGGCGC+CGG - chr1_2:77197787-77197806 Msa0094110:intron 65.0%
! TCATCTGGCGGCGCCGGAAA+CGG - chr1_2:77197793-77197812 Msa0094110:intron 65.0%
TCAGCGGCGGTGGATGAGGA+TGG + chr1_2:77202152-77202171 None:intergenic 65.0%
GAAGCCCACCAGGTCCCTCG+AGG + chr1_2:77193765-77193784 None:intergenic 70.0%
!! CGAGGGACCTGGTGGGCTTC+TGG - chr1_2:77193765-77193784 Msa0094110:intron 70.0%
AGGGGTCGGGGTTCGAACCC+CGG + chr1_2:77196028-77196047 None:intergenic 70.0%
GTTTCCGGCGCCGCCAGATG+AGG + chr1_2:77197794-77197813 None:intergenic 70.0%
GCGTGCCGGGCCTGCTCAGA+AGG - chr1_2:77192233-77192252 Msa0094110:intron 75.0%
! TCTGGCGGCGCCGGAAACGG+AGG - chr1_2:77197796-77197815 Msa0094110:intron 75.0%
CGCGCGCAGCCTGTTGCTGC+AGG - chr1_2:77198991-77199010 Msa0094110:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 77191074 77204256 77191074 ID=Msa0094110;Name=Msa0094110
chr1_2 mRNA 77191074 77204256 77191074 ID=Msa0094110-mRNA-1;Parent=Msa0094110;Name=Msa0094110-mRNA-1;_AED=0.33;_eAED=0.33;_QI=1017|1|1|1|0.9|0.90|11|271|363
chr1_2 exon 77191074 77192022 77191074 ID=Msa0094110-mRNA-1:exon:27385;Parent=Msa0094110-mRNA-1
chr1_2 exon 77192960 77193238 77192960 ID=Msa0094110-mRNA-1:exon:27384;Parent=Msa0094110-mRNA-1
chr1_2 exon 77193946 77194218 77193946 ID=Msa0094110-mRNA-1:exon:27383;Parent=Msa0094110-mRNA-1
chr1_2 exon 77201968 77202097 77201968 ID=Msa0094110-mRNA-1:exon:27382;Parent=Msa0094110-mRNA-1
chr1_2 exon 77202218 77202286 77202218 ID=Msa0094110-mRNA-1:exon:27381;Parent=Msa0094110-mRNA-1
chr1_2 exon 77202535 77202747 77202535 ID=Msa0094110-mRNA-1:exon:27380;Parent=Msa0094110-mRNA-1
chr1_2 exon 77202857 77202994 77202857 ID=Msa0094110-mRNA-1:exon:27379;Parent=Msa0094110-mRNA-1
chr1_2 exon 77203076 77203138 77203076 ID=Msa0094110-mRNA-1:exon:27378;Parent=Msa0094110-mRNA-1
chr1_2 exon 77203243 77203282 77203243 ID=Msa0094110-mRNA-1:exon:27377;Parent=Msa0094110-mRNA-1
chr1_2 exon 77203874 77203920 77203874 ID=Msa0094110-mRNA-1:exon:27376;Parent=Msa0094110-mRNA-1
chr1_2 exon 77204078 77204256 77204078 ID=Msa0094110-mRNA-1:exon:27375;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77204078 77204256 77204078 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77203874 77203920 77203874 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77203243 77203282 77203243 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77203076 77203138 77203076 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77202857 77202994 77202857 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77202535 77202747 77202535 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77202218 77202286 77202218 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77201968 77202097 77201968 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 five_prime_UTR 77194081 77194218 77194081 ID=Msa0094110-mRNA-1:five_prime_utr;Parent=Msa0094110-mRNA-1
chr1_2 CDS 77193946 77194080 77193946 ID=Msa0094110-mRNA-1:cds;Parent=Msa0094110-mRNA-1
chr1_2 CDS 77192960 77193238 77192960 ID=Msa0094110-mRNA-1:cds;Parent=Msa0094110-mRNA-1
chr1_2 CDS 77191345 77192022 77191345 ID=Msa0094110-mRNA-1:cds;Parent=Msa0094110-mRNA-1
chr1_2 three_prime_UTR 77191074 77191344 77191074 ID=Msa0094110-mRNA-1:three_prime_utr;Parent=Msa0094110-mRNA-1
Gene Sequence

>Msa0094110

ATGGTTATAGTAATAGCTGAAGGTGCAGGTCAGGAGCTAATTCCTTCTAATGACACATCTATCGAGAATAAGCCAGATGCTTCATCGAACGACTTGTTTCAAGATGTTGGTCTGTGGTTATCTGAGAAAATTAAGCAAATGCCAACAACCAGAGACAAGAGACAGCCTTCGAGTCAAATGGATGCTGCACAGCCATCCTCATCCACCGCCGCTGAAAATGAAGGAGGTCCGGCGCCGTTTGTTCAGAAGATGTATGACATGGTGGATGATTCCGCGACGGACGATATCGTCTCATGGAGCTCTACCAACAACAGCTTTGTGGTTTGGAACCCCCTGGAATTCGCTTACGTTCTCCTTCCAACCTATTTCAAACACAACAATTTCTCCAGCTTCATCCATCAGCTCGATACCTATGAATTTAGAAAAATTGATTCGGAGCGTTGCGAGTTTGCTAATGAAGAATTTATAGAAGATCAAAAACATCTCCTGAAGAATATACACTGTAGGAAACCTATCCACAGTCATAGTCATCCTCCGGGTTCTGCTGTAGATCCAGAAAGGGAAGCTTTAGAGGAAGAAATAGAGAAGCTTTCCCAAGAGAAAAATTCGCTCGAGTCCAGGTTATTAAACGGCACGGTTGATGTTGAATCAACAAAGTTTCAGCTGGATGTTTTCGAGCAGCTACTGGATGGCATGGAGAAGAGGCAGACAAGTTTGTCAAACTTCTTTGAGAAGGCTCTTCAGAATCCTACTTTACTTGATCATGTTAGGCGCAATATCGAATCCATGGATGCGGCGGCATATAATAGCTTGATTGTCAATCATTACAATCTCAGTATGGAATTTGAAAATGCTTTCCATCAAGAATTTTCGAATAAACTTAGACTGGAATTGTCACCATCTGTCTCAGATATGAACTTTGTATCAGGTAGCAGTAGCACACATGTTTCAAATGAAGATGAGGAAAGCCTGCAGAAACATTTGTCTGAAGGAGAACTGACAGAAATGCAGACAAGAACTGAAAGACCAGGCTGTTCAGAAAATGAAGAGGCAATATCCTACTATCAAGCAAATCCAAATAATGACAGTTGA
Protein sequence

>Msa0094110

MVIVIAEGAGQELIPSNDTSIENKPDASSNDLFQDVGLWLSEKIKQMPTTRDKRQPSSQMDAAQPSSSTAAENEGGPAPFVQKMYDMVDDSATDDIVSWSSTNNSFVVWNPLEFAYVLLPTYFKHNNFSSFIHQLDTYEFRKIDSERCEFANEEFIEDQKHLLKNIHCRKPIHSHSHPPGSAVDPEREALEEEIEKLSQEKNSLESRLLNGTVDVESTKFQLDVFEQLLDGMEKRQTSLSNFFEKALQNPTLLDHVRRNIESMDAAAYNSLIVNHYNLSMEFENAFHQEFSNKLRLELSPSVSDMNFVSGSSSTHVSNEDEESLQKHLSEGELTEMQTRTERPGCSENEEAISYYQANPNNDS*