AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0095680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095680 MtrunA17_Chr3g0095031 98.746 558 7 0 1 558 1 558 0.0 1117
Msa0095680 MtrunA17_Chr5g0442191 73.504 468 115 2 1 468 1 459 0.0 694
Msa0095680 MtrunA17_Chr7g0271121 64.946 368 127 1 100 465 116 483 6.42e-165 487
Msa0095680 MtrunA17_Chr1g0193491 55.607 428 173 5 72 488 98 519 4.26e-160 471
Msa0095680 MtrunA17_Chr1g0204391 43.147 394 195 7 91 459 45 434 1.65e-94 300
Msa0095680 MtrunA17_Chr6g0475251 41.842 380 208 6 86 456 99 474 7.59e-88 285
Msa0095680 MtrunA17_Chr4g0076491 40.506 395 199 9 96 468 293 673 2.18e-74 250
Msa0095680 MtrunA17_Chr3g0107851 40.214 373 197 7 115 474 142 501 6.87e-74 245
Msa0095680 MtrunA17_Chr6g0449741 40.355 394 199 9 96 468 255 633 6.87e-74 248
Msa0095680 MtrunA17_Chr5g0409981 41.617 334 188 5 107 433 119 452 7.72e-74 244
Msa0095680 MtrunA17_Chr1g0176041 37.406 401 232 8 111 493 175 574 6.71e-72 241
Msa0095680 MtrunA17_Chr2g0330401 35.961 406 238 7 100 498 106 496 8.53e-71 235
Msa0095680 MtrunA17_Chr4g0063551 35.797 433 246 8 91 495 141 569 1.56e-70 239
Msa0095680 MtrunA17_Chr3g0121351 36.318 402 234 10 91 473 146 544 2.14e-69 234
Msa0095680 MtrunA17_Chr2g0293631 39.429 350 202 6 95 439 501 845 5.83e-69 241
Msa0095680 MtrunA17_Chr6g0449911 37.176 347 210 5 91 433 166 508 1.57e-68 234
Msa0095680 MtrunA17_Chr2g0277821 38.997 359 206 6 93 443 507 860 2.52e-68 239
Msa0095680 MtrunA17_Chr6g0483491 36.029 408 238 9 94 489 14 410 4.17e-67 224
Msa0095680 MtrunA17_Chr7g0236841 34.703 438 259 10 94 519 14 436 5.66e-67 223
Msa0095680 MtrunA17_Chr7g0270131 36.512 367 220 6 88 443 223 587 3.37e-65 226
Msa0095680 MtrunA17_Chr7g0247181 34.383 381 237 5 83 460 133 503 5.61e-65 220
Msa0095680 MtrunA17_Chr7g0247221 34.383 381 237 5 83 460 136 506 6.94e-65 220
Msa0095680 MtrunA17_Chr7g0247191 34.383 381 237 6 83 460 143 513 1.06e-64 220
Msa0095680 MtrunA17_Chr2g0299681 36.170 376 227 7 94 465 45 411 7.13e-64 214
Msa0095680 MtrunA17_Chr2g0297261 33.602 372 234 6 93 460 37 399 1.58e-63 213
Msa0095680 MtrunA17_Chr1g0200181 37.989 358 199 9 100 442 155 504 1.50e-62 216
Msa0095680 MtrunA17_Chr2g0300291 37.209 387 224 9 79 456 133 509 1.53e-62 219
Msa0095680 MtrunA17_Chr3g0098121 37.097 372 219 8 93 456 155 519 5.77e-62 217
Msa0095680 MtrunA17_Chr1g0157691 37.151 358 202 9 100 442 157 506 1.23e-61 213
Msa0095680 MtrunA17_Chr4g0070981 35.106 376 231 7 94 465 45 411 2.37e-61 208
Msa0095680 MtrunA17_Chr8g0342861 34.946 372 227 7 94 460 45 406 1.14e-60 206
Msa0095680 MtrunA17_Chr2g0329931 35.849 371 225 7 94 460 45 406 1.34e-60 206
Msa0095680 MtrunA17_Chr4g0040761 34.493 345 215 6 94 433 23 361 1.71e-55 200
Msa0095680 MtrunA17_Chr3g0114081 31.967 366 224 7 93 435 19 382 4.97e-53 190
Msa0095680 MtrunA17_Chr7g0236831 32.494 437 220 11 70 434 143 576 1.22e-50 186
Msa0095680 MtrunA17_Chr2g0310581 35.068 365 219 7 94 449 57 412 1.80e-50 181
Msa0095680 MtrunA17_Chr4g0058591 35.430 302 186 5 101 397 213 510 3.55e-50 181
Msa0095680 MtrunA17_Chr8g0347161 33.043 345 213 9 108 436 120 462 6.44e-48 175
Msa0095680 MtrunA17_Chr4g0062301 33.144 353 209 12 97 435 108 447 2.05e-47 174
Msa0095680 MtrunA17_Chr2g0307471 31.356 354 223 9 94 435 95 440 5.61e-47 172
Msa0095680 MtrunA17_Chr4g0003441 29.921 381 236 10 96 461 114 478 1.41e-45 167
Msa0095680 MtrunA17_Chr6g0461751 29.808 416 264 10 82 486 132 530 1.83e-45 168
Msa0095680 MtrunA17_Chr8g0386451 30.952 378 246 9 74 436 271 648 3.07e-45 170
Msa0095680 MtrunA17_Chr8g0347151 30.986 355 226 8 101 436 207 561 7.73e-45 168
Msa0095680 MtrunA17_Chr8g0347171 32.174 345 216 9 108 436 178 520 9.51e-45 167
Msa0095680 MtrunA17_Chr1g0149251 31.464 321 190 9 128 434 2 306 1.31e-43 158
Msa0095680 MtrunA17_Chr6g0466611 32.000 375 227 9 76 431 133 498 4.31e-43 164
Msa0095680 MtrunA17_Chr2g0309551 26.789 545 291 15 11 458 3 536 2.36e-42 159
Msa0095680 MtrunA17_Chr1g0192021 28.440 436 256 8 86 466 22 456 5.10e-42 159
Msa0095680 MtrunA17_Chr7g0263771 31.452 372 230 13 104 465 147 503 6.00e-42 159
Msa0095680 MtrunA17_Chr4g0029191 26.115 471 260 13 77 464 26 491 1.33e-37 147
Msa0095680 MtrunA17_Chr5g0443991 31.624 351 221 10 96 435 83 425 2.18e-37 147
Msa0095680 MtrunA17_Chr4g0034411 30.623 369 238 10 91 449 78 438 6.19e-36 143
Msa0095680 MtrunA17_Chr2g0301281 26.292 445 253 12 94 464 45 488 8.57e-36 141
Msa0095680 MtrunA17_Chr1g0169331 29.534 386 222 13 115 460 16 391 2.48e-35 137
Msa0095680 MtrunA17_Chr4g0004301 27.739 429 222 13 96 448 35 451 1.06e-34 137
Msa0095680 MtrunA17_Chr5g0434301 27.972 429 221 14 96 448 35 451 5.08e-34 135
Msa0095680 MtrunA17_Chr5g0429221 29.255 376 245 10 94 460 7 370 1.73e-33 132
Msa0095680 MtrunA17_Chr1g0179761 27.041 392 229 13 110 465 108 478 5.65e-32 129
Msa0095680 MtrunA17_Chr4g0039471 36.190 210 119 4 85 287 218 419 1.13e-29 121
Msa0095680 MtrunA17_Chr8g0342851 29.446 343 209 8 119 460 2 312 1.32e-29 119
Msa0095680 MtrunA17_Chr3g0145781 26.750 400 238 14 94 451 136 522 2.05e-27 116
Msa0095680 MtrunA17_Chr4g0062321 30.252 238 151 8 172 402 4 233 7.10e-25 103
Msa0095680 MtrunA17_Chr3g0137891 35.465 172 90 5 128 289 2 162 1.64e-22 96.7
Msa0095680 MtrunA17_Chr8g0354761 24.642 349 227 10 115 443 33 365 6.52e-22 99.0
Msa0095680 MtrunA17_Chr8g0349951 38.000 150 85 3 94 240 14 158 1.96e-20 88.6
Msa0095680 MtrunA17_Chr4g0074521 27.467 375 219 15 90 426 82 441 2.59e-17 84.7
Msa0095680 MtrunA17_Chr4g0025141 26.066 211 142 5 268 464 15 225 1.94e-16 79.0
Msa0095680 MtrunA17_Chr3g0137901 34.615 104 61 2 335 434 42 142 1.80e-15 74.7
Msa0095680 MtrunA17_Chr3g0108851 25.215 349 218 13 108 438 13 336 4.45e-13 72.4
Msa0095680 MtrunA17_Chr2g0300871 23.670 376 211 12 115 453 46 382 2.25e-12 70.1
Msa0095680 MtrunA17_Chr8g0364251 33.621 116 75 2 336 450 437 551 1.96e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0095680 AT3G22330.1 65.235 489 151 4 1 472 1 487 0.0 645
Msa0095680 AT3G22310.1 63.928 499 153 3 1 472 1 499 0.0 630
Msa0095680 AT3G22310.2 63.928 499 153 3 1 472 1 499 0.0 630
Msa0095680 AT5G26742.1 63.104 393 136 3 73 456 81 473 1.82e-169 499
Msa0095680 AT5G26742.2 63.104 393 136 3 73 456 81 473 1.87e-169 499
Msa0095680 AT5G26742.3 65.988 344 113 1 117 456 37 380 4.21e-157 464
Msa0095680 AT5G62190.1 44.560 386 201 6 83 459 90 471 8.26e-93 298
Msa0095680 AT1G20920.2 40.056 357 205 6 93 443 195 548 5.22e-73 249
Msa0095680 AT3G01540.4 37.960 353 211 5 95 443 164 512 1.89e-72 243
Msa0095680 AT3G01540.2 37.960 353 211 5 95 443 164 512 1.89e-72 243
Msa0095680 AT3G01540.3 37.960 353 211 5 95 443 164 512 1.89e-72 243
Msa0095680 AT1G31970.1 42.604 338 180 8 107 433 132 466 1.93e-72 241
Msa0095680 AT3G01540.1 37.960 353 211 5 95 443 164 512 2.45e-72 243
Msa0095680 AT5G14610.2 39.067 343 201 5 95 433 167 505 3.46e-72 243
Msa0095680 AT5G14610.6 39.067 343 201 5 95 433 167 505 4.09e-72 243
Msa0095680 AT5G14610.5 39.067 343 201 5 95 433 175 513 4.51e-72 243
Msa0095680 AT1G20920.4 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT1G20920.6 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT1G20920.3 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT1G20920.7 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT1G20920.5 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT1G20920.1 40.000 360 201 7 93 443 533 886 8.35e-72 249
Msa0095680 AT2G33730.1 40.833 360 188 7 96 433 320 676 1.74e-71 243
Msa0095680 AT5G14610.7 40.432 324 185 5 114 433 55 374 3.22e-71 237
Msa0095680 AT5G14610.3 40.432 324 185 5 114 433 55 374 3.22e-71 237
Msa0095680 AT1G55150.1 35.714 420 237 8 87 488 90 494 2.71e-70 234
Msa0095680 AT5G63120.2 37.752 347 211 4 100 443 176 520 2.73e-70 237
Msa0095680 AT5G14610.1 40.000 330 190 5 108 433 248 573 6.83e-70 238
Msa0095680 AT1G55150.2 35.782 422 238 8 87 490 115 521 9.33e-70 234
Msa0095680 AT5G60990.1 35.681 426 249 12 91 498 11 429 4.34e-68 227
Msa0095680 AT3G06480.1 38.109 349 208 5 95 439 441 785 1.11e-67 237
Msa0095680 AT3G58510.1 35.733 389 237 7 114 489 176 564 3.55e-67 229
Msa0095680 AT3G58510.3 35.733 389 237 7 114 489 176 564 3.55e-67 229
Msa0095680 AT3G58510.2 35.733 389 237 7 114 489 176 564 3.55e-67 229
Msa0095680 AT3G58570.1 37.731 379 219 8 111 473 168 545 9.31e-67 229
Msa0095680 AT2G42520.2 36.939 379 222 9 111 473 181 558 5.79e-66 226
Msa0095680 AT2G42520.1 36.939 379 222 9 111 473 181 558 5.79e-66 226
Msa0095680 AT2G42520.3 36.939 379 222 9 111 473 181 558 5.79e-66 226
Msa0095680 AT2G47330.1 38.611 360 201 9 95 443 234 584 1.35e-65 228
Msa0095680 AT3G19760.1 32.995 394 247 7 75 460 17 401 1.76e-65 219
Msa0095680 AT1G51380.1 35.310 371 227 6 94 460 27 388 1.62e-64 216
Msa0095680 AT4G00660.1 33.858 381 239 5 83 460 125 495 3.21e-64 218
Msa0095680 AT4G00660.2 33.858 381 239 5 83 460 125 495 3.21e-64 218
Msa0095680 AT2G45810.1 35.156 384 234 8 83 462 148 520 3.33e-64 219
Msa0095680 AT3G61240.2 34.555 382 235 8 83 460 118 488 1.57e-63 216
Msa0095680 AT3G61240.1 34.555 382 235 8 83 460 118 488 1.57e-63 216
Msa0095680 AT4G16630.1 36.951 387 224 10 79 456 160 535 2.54e-63 222
Msa0095680 AT1G16280.1 37.467 379 205 9 94 456 63 425 8.43e-63 214
Msa0095680 AT5G51280.1 36.220 381 212 9 83 442 136 506 2.19e-62 216
Msa0095680 AT3G13920.1 35.215 372 226 7 94 460 44 405 1.84e-61 208
Msa0095680 AT3G13920.3 35.215 372 226 7 94 460 34 395 2.18e-61 208
Msa0095680 AT3G09620.2 37.396 361 180 8 93 443 401 725 4.77e-61 218
Msa0095680 AT3G09620.1 37.396 361 180 8 93 443 400 724 4.79e-61 218
Msa0095680 AT1G72730.1 35.753 372 224 6 94 460 46 407 4.89e-61 207
Msa0095680 AT1G28180.1 37.975 316 185 6 124 433 8 318 9.89e-61 205
Msa0095680 AT3G13920.4 36.212 359 214 7 107 460 52 400 2.07e-60 206
Msa0095680 AT5G14610.4 37.126 334 197 7 95 424 175 499 3.34e-60 207
Msa0095680 AT3G13920.5 35.775 355 213 7 94 443 48 392 4.97e-60 205
Msa0095680 AT3G13920.2 35.775 355 213 7 94 443 44 388 7.19e-60 204
Msa0095680 AT4G33370.1 36.565 361 202 8 100 443 108 458 1.46e-59 207
Msa0095680 AT1G77030.1 35.652 345 211 6 94 433 33 371 4.08e-59 211
Msa0095680 AT1G54270.1 34.409 372 229 6 94 460 44 405 1.46e-58 201
Msa0095680 AT1G54270.2 35.376 359 217 6 107 460 52 400 1.55e-57 198
Msa0095680 AT3G06480.2 36.392 316 193 5 95 406 441 752 1.29e-56 203
Msa0095680 AT1G71370.1 32.861 353 226 5 93 435 20 371 1.39e-56 199
Msa0095680 AT5G63120.3 37.134 307 188 4 100 403 176 480 9.69e-55 192
Msa0095680 AT5G63120.4 37.134 307 188 4 100 403 176 480 9.69e-55 192
Msa0095680 AT5G63120.5 37.134 307 188 4 100 403 176 480 9.69e-55 192
Msa0095680 AT5G63120.1 37.209 301 184 4 100 397 176 474 1.35e-54 192
Msa0095680 AT5G05450.1 32.591 359 222 8 96 435 23 380 3.53e-52 188
Msa0095680 AT3G18600.1 33.994 353 215 10 94 436 94 438 1.73e-51 186
Msa0095680 AT5G65900.1 33.333 366 225 9 94 448 159 516 3.17e-51 186
Msa0095680 AT5G08610.1 32.732 388 230 13 101 466 394 772 3.42e-49 183
Msa0095680 AT5G08620.1 31.818 374 238 9 108 466 99 470 5.95e-48 176
Msa0095680 AT3G02065.3 31.476 359 236 7 89 440 110 465 2.02e-47 173
Msa0095680 AT3G02065.2 31.476 359 236 7 89 440 110 465 2.02e-47 173
Msa0095680 AT5G63630.2 30.263 380 250 8 101 466 260 638 4.40e-47 176
Msa0095680 AT5G63630.1 30.263 380 250 8 101 466 66 444 8.79e-47 172
Msa0095680 AT3G02065.1 32.615 325 209 7 123 440 7 328 1.90e-46 167
Msa0095680 AT1G63250.1 32.778 360 219 10 96 436 335 690 8.46e-46 172
Msa0095680 AT5G11170.1 30.053 376 242 10 96 461 53 417 1.07e-45 166
Msa0095680 AT5G11200.1 30.053 376 242 10 96 461 53 417 1.07e-45 166
Msa0095680 AT1G12770.2 28.640 419 242 9 93 456 114 530 3.51e-45 168
Msa0095680 AT1G12770.1 28.640 419 242 9 93 456 114 530 3.51e-45 168
Msa0095680 AT2G07750.1 32.493 357 224 10 96 436 382 737 6.71e-45 170
Msa0095680 AT3G16840.2 31.605 405 203 11 115 448 217 618 1.16e-44 169
Msa0095680 AT3G16840.1 31.605 405 203 11 115 448 216 617 1.20e-44 169
Msa0095680 AT5G11170.2 31.105 344 216 10 128 461 2 334 4.41e-43 157
Msa0095680 AT4G09730.1 32.123 358 220 9 93 431 116 469 6.53e-41 157
Msa0095680 AT5G11200.3 28.125 416 239 12 96 461 53 458 7.60e-40 151
Msa0095680 AT3G09720.2 29.521 376 246 10 92 460 144 507 1.46e-39 152
Msa0095680 AT3G09720.1 29.521 376 246 10 92 460 144 507 1.46e-39 152
Msa0095680 AT4G15850.1 26.680 491 273 13 96 513 38 514 2.23e-39 151
Msa0095680 AT4G34910.1 28.346 381 227 5 93 427 50 430 8.42e-39 150
Msa0095680 AT5G11200.2 27.021 433 240 14 96 461 53 476 1.19e-38 148
Msa0095680 AT2G40700.1 27.103 428 230 10 115 464 57 480 1.55e-37 147
Msa0095680 AT1G71280.2 30.380 316 187 7 93 401 21 310 1.51e-36 139
Msa0095680 AT1G71280.1 30.284 317 188 7 93 402 21 311 2.52e-35 138
Msa0095680 AT5G54910.1 29.067 375 239 11 90 449 72 434 8.18e-35 140
Msa0095680 AT1G51380.2 35.586 222 133 3 94 313 27 240 4.86e-34 130
Msa0095680 AT1G51380.4 36.946 203 120 2 94 294 27 223 3.22e-33 129
Msa0095680 AT1G51380.3 36.946 203 120 2 94 294 27 223 6.18e-33 128
Msa0095680 AT3G53110.1 29.012 324 201 11 127 431 132 445 9.36e-31 125
Msa0095680 AT3G06980.1 25.995 377 242 10 91 435 376 747 1.16e-29 124
Msa0095680 AT5G19210.2 25.946 370 229 12 90 426 77 434 6.20e-21 96.3
Msa0095680 AT1G28180.2 39.496 119 68 2 118 232 2 120 5.55e-18 80.5
Msa0095680 AT1G59990.1 35.593 118 74 2 336 452 426 542 1.25e-12 70.9
Msa0095680 AT1G59990.2 35.593 118 74 2 336 452 426 542 1.39e-12 70.9
Msa0095680 AT1G10930.1 23.944 355 206 13 114 437 456 777 2.82e-11 67.0

Find 180 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGAAATAATTAGTCTTTA+TGG 0.084893 1_3:-1011989 Msa0095680:CDS
ACAAATATCTCTGAATTATT+TGG 0.134715 1_3:+1009237 None:intergenic
TTCACTTGATGGTTTAATTT+TGG 0.159454 1_3:-1007351 Msa0095680:three_prime_UTR
GGCTGTGACTTTGCTGCCTT+TGG 0.189682 1_3:-1007442 Msa0095680:three_prime_UTR
CTTTCCTGTGGATGGAATTC+AGG 0.221146 1_3:+1007175 None:intergenic
CGCAAAGCTATTTCCCATTC+AGG 0.241770 1_3:-1013619 Msa0095680:intron
GCACTTTCCAGGAGTTAAAA+TGG 0.244337 1_3:+1007382 None:intergenic
AAACAGCTATTTCAATGTTT+TGG 0.259542 1_3:-1010367 Msa0095680:CDS
GAAGAAACGCCGTGAGAATA+TGG 0.267167 1_3:+1013914 None:intergenic
TTGCTAATTTGTTGCTGAAT+AGG 0.267190 1_3:+1011959 None:intergenic
ATATCCCTCCCTTGCATTGC+AGG 0.268425 1_3:+1012313 None:intergenic
AGACTAATTATTTCCAAGTT+AGG 0.275152 1_3:+1011995 None:intergenic
TGGAAATAATTAGTCTTTAT+GGG 0.279985 1_3:-1011988 Msa0095680:CDS
TATGGGAAATCCAGTGGTTT+TGG 0.292126 1_3:-1007641 Msa0095680:CDS
ACTGGGAAAACTCTTGCTTT+TGG 0.296075 1_3:-1012268 Msa0095680:CDS
TCTCGGCAACAATGCCTTCT+TGG 0.303539 1_3:-1011742 Msa0095680:CDS
TGGATTTCCCATAGCCATTT+CGG 0.310094 1_3:+1007651 None:intergenic
TGCACGCCATCTTCACTTGA+TGG 0.310578 1_3:-1007362 Msa0095680:three_prime_UTR
TCTGGTAAAACGGATAAATA+TGG 0.312815 1_3:-1007575 Msa0095680:CDS
CCACTTTCAACAGCAATCTT+TGG 0.314583 1_3:+1007764 None:intergenic
GAGATATTTGTTCATCGATC+TGG 0.318649 1_3:-1009225 Msa0095680:CDS
GAAGATGGCGTGCACTTTCC+AGG 0.321221 1_3:+1007371 None:intergenic
AGGCTGTTTCACGCGAAATC+TGG 0.345032 1_3:-1013810 Msa0095680:CDS
CTCAATTGTCTTTACATCCC+TGG 0.345874 1_3:+1009143 None:intergenic
AAGTTTAGCTCAGGTAAATC+TGG 0.349135 1_3:-1007509 Msa0095680:CDS
AATCCCCTTATCACTTGATA+TGG 0.353686 1_3:-1007271 Msa0095680:three_prime_UTR
AATAGCAGTTCCTTTCTTAC+CGG 0.354230 1_3:+1009188 None:intergenic
CAGAGAGAAAGAACTCTTAC+TGG 0.358585 1_3:-1010396 Msa0095680:CDS
TAGTGGTCGATACGGCTCTT+CGG 0.359807 1_3:-1007714 Msa0095680:CDS
GCTGTGACTTTGCTGCCTTT+GGG 0.360636 1_3:-1007441 Msa0095680:three_prime_UTR
CGTCGATCAAGTAGTAGTTC+TGG 0.364601 1_3:-1007680 Msa0095680:CDS
TGATCGTCTATCACATATAA+TGG 0.364977 1_3:-1010466 Msa0095680:CDS
TCAAGTCGTTCCAGTGGCTT+TGG 0.365127 1_3:-1007533 Msa0095680:CDS
GCCTTGAATCTCCTAGGTTC+TGG 0.369811 1_3:+1007462 None:intergenic
AGTGGTCGATACGGCTCTTC+GGG 0.382018 1_3:-1007713 Msa0095680:CDS
CAAGGATGCTGCACCTAACT+TGG 0.388097 1_3:-1012008 Msa0095680:CDS
AAAGAGATCGTGAATGCGTT+GGG 0.389527 1_3:-1013654 Msa0095680:CDS
ATAAGAGTTTGACGCTTAGA+AGG 0.390311 1_3:+1011767 None:intergenic
CTGAGAATCGTGCTTGTCAT+TGG 0.390811 1_3:+1013948 None:intergenic
CTCTCCTACTTTGCCGTTGA+CGG 0.391260 1_3:+1013833 None:intergenic
GCGTCAAACTCTTATGTTCT+CGG 0.392179 1_3:-1011759 Msa0095680:CDS
CAGCAACAAATTAGCAAACT+TGG 0.398443 1_3:-1011953 Msa0095680:CDS
CTTAATAATCTTATCCAAGA+TGG 0.402999 1_3:+1012240 None:intergenic
ACTTACAAGATCAATTGTTA+AGG 0.411746 1_3:+1011685 None:intergenic
GGCTTTGGAAAGTTTAGCTC+AGG 0.415998 1_3:-1007518 Msa0095680:CDS
TTTCTCCATATCAAGTGATA+AGG 0.416224 1_3:+1007266 None:intergenic
CTTACAAGATCAATTGTTAA+GGG 0.417520 1_3:+1011686 None:intergenic
CACTTTCCAGGAGTTAAAAT+GGG 0.417863 1_3:+1007383 None:intergenic
AAGAATTCCTGCTTTAGAAT+AGG 0.421490 1_3:+1010826 None:intergenic
TTCTCCATATCAAGTGATAA+GGG 0.422298 1_3:+1007267 None:intergenic
GGTCGAGCCAGAACAGGAAC+TGG 0.422643 1_3:-1012286 Msa0095680:CDS
TATCAAGTGATAAGGGGATT+AGG 0.423206 1_3:+1007274 None:intergenic
AAGAAGGGATCCTCTGGCTT+TGG 0.431776 1_3:-1012077 Msa0095680:CDS
CCAAAGATTGCTGTTGAAAG+TGG 0.438332 1_3:-1007764 Msa0095680:CDS
GGATCTGGCCGAAATGGCTA+TGG 0.441031 1_3:-1007659 Msa0095680:CDS
TCAGGTAAATCTGGGAGATA+TGG 0.441756 1_3:-1007500 Msa0095680:CDS
CAATTGTTAAGGGTTTGTTT+AGG 0.442345 1_3:+1011696 None:intergenic
GTGTTATTGATCTTCTCAAA+AGG 0.443558 1_3:-1011895 Msa0095680:CDS
GAATGATACATTCTGCTTTG+AGG 0.448716 1_3:-1007231 Msa0095680:three_prime_UTR
AGTGGATCAGCAGACATGTT+TGG 0.451065 1_3:-1007746 Msa0095680:CDS
AAATTAAACCATACCTGAAT+GGG 0.452116 1_3:+1013606 None:intergenic
GATTGGAGATCGCGAAGCTT+GGG 0.452320 1_3:-1013683 Msa0095680:CDS
GCTTGTCATTGGAAGAGAAA+TGG 0.454590 1_3:+1013959 None:intergenic
AGTTCTGGATCTGGCCGAAA+TGG 0.458244 1_3:-1007665 Msa0095680:CDS
GGCTCTAGTTCAAGGAAGTC+AGG 0.459719 1_3:-1007617 Msa0095680:CDS
ATGATTGGTCGAGCCAGAAC+AGG 0.460079 1_3:-1012292 Msa0095680:CDS
GTTCATCGATCTGGACGAAC+AGG 0.460090 1_3:-1009216 Msa0095680:CDS
GCAACTGATGTTGCTTCCCG+TGG 0.460098 1_3:-1010342 Msa0095680:CDS
GAACTTACAAGATCAACATT+TGG 0.460659 1_3:+1010309 None:intergenic
AATAATAACAGTTAAAATAG+AGG 0.463106 1_3:-1007409 Msa0095680:three_prime_UTR
TGTTATTGATCTTCTCAAAA+GGG 0.463599 1_3:-1011894 Msa0095680:CDS
ACAGGACGTGCCGGTAAGAA+AGG 0.464924 1_3:-1009198 Msa0095680:CDS
TTTATTGTAGAGAGCTGTGC+TGG 0.465875 1_3:-1012338 Msa0095680:intron
GGATTGGAGATCGCGAAGCT+TGG 0.466735 1_3:-1013684 Msa0095680:CDS
GTGAATGCGTTGGGGAAGAA+AGG 0.468918 1_3:-1013645 Msa0095680:CDS
TTGATTATGGCAGCAAAAGA+AGG 0.470838 1_3:-1012093 Msa0095680:intron
GAAATTAAACCATACCTGAA+TGG 0.471139 1_3:+1013605 None:intergenic
ACAAGTTGAAAAGGAATTCA+AGG 0.474968 1_3:-1012026 Msa0095680:CDS
GATATTGTAGTCGGCACACC+TGG 0.475092 1_3:-1011920 Msa0095680:CDS
TAGACGATCAGCATCACGTT+TGG 0.475355 1_3:+1010479 None:intergenic
TACTTTGCCGTTGACGGCGG+AGG 0.479815 1_3:+1013839 None:intergenic
CTGTGACTTTGCTGCCTTTG+GGG 0.488448 1_3:-1007440 Msa0095680:three_prime_UTR
TTGTTGTCCTCCGCCGTCAA+CGG 0.493780 1_3:-1013846 Msa0095680:CDS
GGAAATAATTAGTCTTTATG+GGG 0.493886 1_3:-1011987 Msa0095680:CDS
TCAAGTAGTAGTTCTGGATC+TGG 0.495071 1_3:-1007674 Msa0095680:CDS
ATTAAACCATCAAGTGAAGA+TGG 0.495150 1_3:+1007356 None:intergenic
CAGCAAAAGAAGGGATCCTC+TGG 0.505808 1_3:-1012083 Msa0095680:CDS
TGGAGATTCTGATCAGAAGT+TGG 0.507254 1_3:-1010885 Msa0095680:CDS
TGGAGTCTTACTGTTATAAG+AGG 0.508290 1_3:+1010800 None:intergenic
TAAAGAGATCGTGAATGCGT+TGG 0.509365 1_3:-1013655 Msa0095680:CDS
GATACGGCTCTTCGGGAGGT+AGG 0.511083 1_3:-1007706 Msa0095680:CDS
TCTAATGCCTATTCTAAAGC+AGG 0.512824 1_3:-1010833 Msa0095680:CDS
ACGGATAAATATGGTGGTGG+AGG 0.516033 1_3:-1007566 Msa0095680:CDS
TCCACACAGAAAATCAATCC+AGG 0.519284 1_3:-1009161 Msa0095680:CDS
GATCACGCGGAACACGATGA+TGG 0.522588 1_3:-1013729 Msa0095680:CDS
TTAATAATCTTATCCAAGAT+GGG 0.524926 1_3:+1012241 None:intergenic
CCTACTCACTTTCCTGTGGA+TGG 0.525418 1_3:+1007167 None:intergenic
GTAAGATTCTTTATCCAAGA+AGG 0.527112 1_3:+1011728 None:intergenic
GCCAGAACCTAGGAGATTCA+AGG 0.528840 1_3:-1007463 Msa0095680:three_prime_UTR
TGTCGTGCAAGTTCTCTAGT+TGG 0.530655 1_3:+1012046 None:intergenic
ACTTGCACGACAAGTTGAAA+AGG 0.531541 1_3:-1012035 Msa0095680:CDS
ACTTGATATGGAGAAAGTTA+CGG 0.536080 1_3:-1007259 Msa0095680:three_prime_UTR
GTTGAACTTCCACTCGTCGC+TGG 0.537760 1_3:-1013784 Msa0095680:CDS
CTCTGATAGGAACATGCTAA+AGG 0.538109 1_3:-1010528 Msa0095680:intron
GATGATGGTTGCGGTGTCAA+TGG 0.539119 1_3:-1013714 Msa0095680:CDS
TGCGGTGTCAATGGTGATGA+AGG 0.545595 1_3:-1013705 Msa0095680:CDS
ATACGGCTCTTCGGGAGGTA+GGG 0.545873 1_3:-1007705 Msa0095680:CDS
AGAATAGGCATTAGATGCAA+TGG 0.546629 1_3:+1010841 None:intergenic
TGAATGCGTTGGGGAAGAAA+GGG 0.551406 1_3:-1013644 Msa0095680:CDS
AGAAGATCAATAACACGTCC+AGG 0.554477 1_3:+1011902 None:intergenic
TCGTGGTGCGCAGCTTGCTG+TGG 0.555938 1_3:-1013757 Msa0095680:CDS
CAAATTAGCAAACTTGGTAG+TGG 0.556602 1_3:-1011947 Msa0095680:CDS
TCCGCCGTCAACGGCAAAGT+AGG 0.558807 1_3:-1013837 Msa0095680:CDS
GTTATTGATCTTCTCAAAAG+GGG 0.561000 1_3:-1011893 Msa0095680:CDS
TGTCAATGGTGATGAAGGAT+TGG 0.562221 1_3:-1013700 Msa0095680:CDS
CAACTGATGTTGCTTCCCGT+GGG 0.563184 1_3:-1010341 Msa0095680:CDS
AGTTTAGCTCAGGTAAATCT+GGG 0.566547 1_3:-1007508 Msa0095680:CDS
GTGCTGGAACCTGCAATGCA+AGG 0.568416 1_3:-1012322 Msa0095680:CDS
AGAAATTGAAGCCAGAACCT+AGG 0.568815 1_3:-1007473 Msa0095680:exon
GATCTGGCCGAAATGGCTAT+GGG 0.570071 1_3:-1007658 Msa0095680:CDS
AGCATGAGTAGTGGTCGATA+CGG 0.571117 1_3:-1007722 Msa0095680:CDS
GCGGAACACGATGATGGTTG+CGG 0.571554 1_3:-1013723 Msa0095680:CDS
ACGCCGTGAGAATATGGAAG+AGG 0.573074 1_3:+1013920 None:intergenic
TCTGATCAGAAGTTGGCAGA+TGG 0.573716 1_3:-1010878 Msa0095680:CDS
ATGCAAGGGAGGGATATGAT+TGG 0.576052 1_3:-1012307 Msa0095680:CDS
TGCTGGAACCTGCAATGCAA+GGG 0.576182 1_3:-1012321 Msa0095680:CDS
TCATCCTGAATTCCATCCAC+AGG 0.577060 1_3:-1007179 Msa0095680:three_prime_UTR
AAGACAATTGAGAGAGACGT+TGG 0.577942 1_3:-1009132 Msa0095680:CDS
AAAACGGATAAATATGGTGG+TGG 0.578308 1_3:-1007569 Msa0095680:CDS
CACTCCTACTCACTTTCCTG+TGG 0.578835 1_3:+1007163 None:intergenic
GCTAAACTTTCCAAAGCCAC+TGG 0.588118 1_3:+1007523 None:intergenic
AGGAAGGTGAATGAAAATGA+AGG 0.590188 1_3:+1014001 None:intergenic
TGGAACCTGCAATGCAAGGG+AGG 0.593155 1_3:-1012318 Msa0095680:CDS
TGATTATGGCAGCAAAAGAA+GGG 0.594812 1_3:-1012092 Msa0095680:intron
CTAGTTCAAGGAAGTCAGGA+GGG 0.596259 1_3:-1007613 Msa0095680:CDS
GGAACCTGCAATGCAAGGGA+GGG 0.598313 1_3:-1012317 Msa0095680:CDS
TCCTACTTTGCCGTTGACGG+CGG 0.599155 1_3:+1013836 None:intergenic
AGCAGTTCAAGTCGTTCCAG+TGG 0.601225 1_3:-1007539 Msa0095680:CDS
ATTAAATGTGAGGCCTTGCA+TGG 0.602175 1_3:-1010435 Msa0095680:CDS
ACTAGAGCCACCAAAACCAC+TGG 0.602513 1_3:+1007631 None:intergenic
TGATAGGAACATGCTAAAGG+AGG 0.604402 1_3:-1010525 Msa0095680:intron
GCGAGGCTACTGTGACGGAT+CGG 0.606765 1_3:+1013870 None:intergenic
GTCGAGCCAGAACAGGAACT+GGG 0.607112 1_3:-1012285 Msa0095680:CDS
TCTGGACGAACAGGACGTGC+CGG 0.607192 1_3:-1009207 Msa0095680:CDS
TCTCCATATCAAGTGATAAG+GGG 0.607836 1_3:+1007268 None:intergenic
GATCCTCTTCCATATTCTCA+CGG 0.609174 1_3:-1013923 Msa0095680:CDS
ATTATTTGGCTTATCCCCAA+AGG 0.610196 1_3:+1007426 None:intergenic
GTCACAGCCTTGAATCTCCT+AGG 0.613042 1_3:+1007456 None:intergenic
AGTAGGATTTCAAGAAGCGG+TGG 0.614756 1_3:-1011810 Msa0095680:CDS
CACTCGTCGCTGGTATCTCG+TGG 0.615470 1_3:-1013774 Msa0095680:CDS
CACGAGATACCAGCGACGAG+TGG 0.616193 1_3:+1013775 None:intergenic
AAGGGGTTCACTGAAACTGA+AGG 0.617851 1_3:-1011876 Msa0095680:CDS
CCATCCACAGGAAAGTGAGT+AGG 0.617972 1_3:-1007167 Msa0095680:three_prime_UTR
TTGTGAAATATCTCCATGCA+AGG 0.620343 1_3:+1010422 None:intergenic
GCTGATCAGATGCTTCAAGT+AGG 0.623573 1_3:-1011827 Msa0095680:CDS
ACAAGGCGAGGCTACTGTGA+CGG 0.623835 1_3:+1013865 None:intergenic
GAAATAATTAGTCTTTATGG+GGG 0.625340 1_3:-1011986 Msa0095680:CDS
GGTAAAACGGATAAATATGG+TGG 0.629054 1_3:-1007572 Msa0095680:CDS
CATTTGGTATATCAAGCCCA+CGG 0.630606 1_3:+1010325 None:intergenic
GGTCGATACGGCTCTTCGGG+AGG 0.630819 1_3:-1007710 Msa0095680:CDS
GCTTGAAGTTATACTAGATG+AGG 0.633346 1_3:+1007303 None:intergenic
AGCGACGAGTGGAAGTTCAA+CGG 0.634902 1_3:+1013786 None:intergenic
AGTTCAAGGAAGTCAGGAGG+GGG 0.635455 1_3:-1007611 Msa0095680:CDS
GTTGACGGCGGAGGACAACA+AGG 0.641610 1_3:+1013848 None:intergenic
ATGTTTGGCAGCATGAGTAG+TGG 0.644388 1_3:-1007731 Msa0095680:CDS
ATTTGGTATATCAAGCCCAC+GGG 0.644960 1_3:+1010326 None:intergenic
CGGCGGAGGACAACAAGGCG+AGG 0.646634 1_3:+1013853 None:intergenic
CCACACAGAAAATCAATCCA+GGG 0.652678 1_3:-1009160 Msa0095680:CDS
TCAACGGCAAAGTAGGAGAG+AGG 0.655288 1_3:-1013830 Msa0095680:CDS
TCTAGTTCAAGGAAGTCAGG+AGG 0.658828 1_3:-1007614 Msa0095680:CDS
AATGGCTATGGGAAATCCAG+TGG 0.659955 1_3:-1007647 Msa0095680:CDS
ACGGATCGGAAGTTGTTCAA+CGG 0.660554 1_3:+1013884 None:intergenic
AGTGGCGTAGATATTGTAGT+CGG 0.661840 1_3:-1011929 Msa0095680:CDS
AAGAGATCGTGAATGCGTTG+GGG 0.664904 1_3:-1013653 Msa0095680:CDS
TCAAGTAGGATTTCAAGAAG+CGG 0.666197 1_3:-1011813 Msa0095680:CDS
GGTGCTAACACCAAAGCCAG+AGG 0.679712 1_3:+1012067 None:intergenic
TAGTTCAAGGAAGTCAGGAG+GGG 0.687822 1_3:-1007612 Msa0095680:CDS
TGCTGTGGATTACGATCACG+CGG 0.719875 1_3:-1013742 Msa0095680:CDS
GATCGGAAGTTGTTCAACGG+CGG 0.720840 1_3:+1013887 None:intergenic
CGTTGGATGTAAATTCACAG+AGG 0.770685 1_3:-1009115 Msa0095680:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTATTATTATTATTT+TGG - chr1_3:1007545-1007564 Msa0095680:CDS 0.0%
!!! TTGTTGTTTTTTTTTTTTTT+TGG - chr1_3:1007573-1007592 Msa0095680:CDS 10.0%
!!! TGTTGTTTTTTTTTTTTTTT+GGG - chr1_3:1007574-1007593 Msa0095680:CDS 10.0%
!!! TTTTTATAATTTCAAAAGTT+TGG - chr1_3:1008387-1008406 Msa0095680:intron 10.0%
!! TCTAAATAAAAAATATCATT+TGG + chr1_3:1009498-1009517 None:intergenic 10.0%
!!! ACCATTTTTTTTTTAATTAA+AGG - chr1_3:1009643-1009662 Msa0095680:intron 10.0%
!! ACCTTTAATTAAAAAAAAAA+TGG + chr1_3:1009647-1009666 None:intergenic 10.0%
!! TAAGTATGTTAAAAAAATAT+AGG - chr1_3:1009841-1009860 Msa0095680:intron 10.0%
!!! TATATTTTGATTATATTTGT+GGG - chr1_3:1009929-1009948 Msa0095680:intron 10.0%
!!! AAACTAAAATTTCTTTTTAA+GGG + chr1_3:1009975-1009994 None:intergenic 10.0%
!!! AAAACTAAAATTTCTTTTTA+AGG + chr1_3:1009976-1009995 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGTTAGGA+AGG + chr1_3:1007129-1007148 None:intergenic 15.0%
!!! GAGTTTTTTTTTTTTTTGTT+AGG + chr1_3:1007133-1007152 None:intergenic 15.0%
!! GTTCAAAATAATAACAAAAT+CGG + chr1_3:1007601-1007620 None:intergenic 15.0%
!!! TATTTTGAACTTTTTTTAAC+AGG - chr1_3:1007611-1007630 Msa0095680:CDS 15.0%
!!! AAAATTTTGTAACATCTATT+AGG + chr1_3:1007678-1007697 None:intergenic 15.0%
!! ATTGAGTAAATAAAGATAAA+GGG - chr1_3:1007727-1007746 Msa0095680:CDS 15.0%
!! ACAAAAATAACAAAATTGTT+AGG - chr1_3:1008120-1008139 Msa0095680:intron 15.0%
!! ATTAAGTTTAATGCTAAAAA+TGG - chr1_3:1008888-1008907 Msa0095680:intron 15.0%
!! TTAAGTTTAATGCTAAAAAT+GGG - chr1_3:1008889-1008908 Msa0095680:intron 15.0%
!! ATTAAAAAAAAAATGGTGTA+GGG + chr1_3:1009640-1009659 None:intergenic 15.0%
!! AATTAAAAAAAAAATGGTGT+AGG + chr1_3:1009641-1009660 None:intergenic 15.0%
!!! GTATATTTTGATTATATTTG+TGG - chr1_3:1009928-1009947 Msa0095680:intron 15.0%
!!! TGATTCGATAAATATTTTTA+TGG - chr1_3:1010003-1010022 Msa0095680:intron 15.0%
!!! CTATTAAATAATTTCTTTTG+AGG + chr1_3:1011358-1011377 None:intergenic 15.0%
!! CTCAAAAGAAATTATTTAAT+AGG - chr1_3:1011356-1011375 Msa0095680:intron 15.0%
!! AATGATATAGAATTATTTGT+GGG + chr1_3:1011383-1011402 None:intergenic 15.0%
!! TAATGATATAGAATTATTTG+TGG + chr1_3:1011384-1011403 None:intergenic 15.0%
!! ATTTATATTATGAAAGCTAA+AGG + chr1_3:1012484-1012503 None:intergenic 15.0%
!!! TTTAGCTTTCATAATATAAA+TGG - chr1_3:1012483-1012502 Msa0095680:intron 15.0%
!! TACTATTACGAAAATAAAAT+TGG + chr1_3:1012617-1012636 None:intergenic 15.0%
!!! CTATTTTAACTGTTATTATT+TGG + chr1_3:1013702-1013721 None:intergenic 15.0%
!! AATAATAACAGTTAAAATAG+AGG - chr1_3:1013702-1013721 Msa0095680:CDS 15.0%
!!! TTTTAACAGGTTATTAGTTA+TGG - chr1_3:1007624-1007643 Msa0095680:CDS 20.0%
!! GATTGAGTAAATAAAGATAA+AGG - chr1_3:1007726-1007745 Msa0095680:CDS 20.0%
!!! TGTTTTTTCATAAACTACAT+TGG + chr1_3:1007820-1007839 None:intergenic 20.0%
!!! CAATTTGTATTTTCATTAGT+TGG - chr1_3:1007853-1007872 Msa0095680:intron 20.0%
!! AAATATATATGCAAGAGTAA+GGG + chr1_3:1008312-1008331 None:intergenic 20.0%
!! AAAATATATATGCAAGAGTA+AGG + chr1_3:1008313-1008332 None:intergenic 20.0%
!!! TTACTCTTGCATATATATTT+TGG - chr1_3:1008312-1008331 Msa0095680:intron 20.0%
!! TTTATAAATAATTCACGAAC+AGG - chr1_3:1008433-1008452 Msa0095680:intron 20.0%
!! TTAATAATCTTATCCAAGAT+GGG + chr1_3:1008873-1008892 None:intergenic 20.0%
!!! CTAACTATTCAATTTTTTTG+TGG - chr1_3:1008995-1009014 Msa0095680:intron 20.0%
!!! AATTTTTTTGTGGTTGATTA+TGG - chr1_3:1009005-1009024 Msa0095680:intron 20.0%
!!! TTGGAAATAATTAGTCTTTA+TGG - chr1_3:1009122-1009141 Msa0095680:CDS 20.0%
!!! TGGAAATAATTAGTCTTTAT+GGG - chr1_3:1009123-1009142 Msa0095680:CDS 20.0%
!!! AAAAAGATTTTGTTTCTTGA+TGG + chr1_3:1009606-1009625 None:intergenic 20.0%
!! ATTGAAAATTAATCTGTTTG+AGG - chr1_3:1010186-1010205 Msa0095680:intron 20.0%
!! TCGTGAGAAAATATATAATA+TGG + chr1_3:1010334-1010353 None:intergenic 20.0%
!!! ATATATTTTCTCACGATTTT+TGG - chr1_3:1010338-1010357 Msa0095680:CDS 20.0%
!!! TATATTTTCTCACGATTTTT+GGG - chr1_3:1010339-1010358 Msa0095680:CDS 20.0%
!!! ATTTTATTTTTGCTACTCAA+CGG + chr1_3:1011011-1011030 None:intergenic 20.0%
!! GGAAAGTTCAAATTAAAAAA+TGG + chr1_3:1011057-1011076 None:intergenic 20.0%
!! CAAATAAGAAACAACTTAAA+AGG + chr1_3:1011119-1011138 None:intergenic 20.0%
!!! TTTAAGTTGTTTCTTATTTG+AGG - chr1_3:1011119-1011138 Msa0095680:intron 20.0%
!! TTACCGTAAAATTAATGATA+GGG + chr1_3:1011300-1011319 None:intergenic 20.0%
!! ATTACCGTAAAATTAATGAT+AGG + chr1_3:1011301-1011320 None:intergenic 20.0%
!! ATAAATTGTTGTAATTCGAT+TGG + chr1_3:1011601-1011620 None:intergenic 20.0%
!! ACAAATATCTCTGAATTATT+TGG + chr1_3:1011877-1011896 None:intergenic 20.0%
!!! ACAATCATTATATTTTACCA+CGG - chr1_3:1012213-1012232 Msa0095680:intron 20.0%
!!! AGTTTTATTCATTCTCAAAA+AGG + chr1_3:1012548-1012567 None:intergenic 20.0%
!! GAGAATGAATAAAACTTTAT+CGG - chr1_3:1012552-1012571 Msa0095680:intron 20.0%
! AAATTAAACCATACCTGAAT+GGG + chr1_3:1007508-1007527 None:intergenic 25.0%
! AGCATTTACCAATAATTGAT+TGG - chr1_3:1008234-1008253 Msa0095680:intron 25.0%
!!! AGAAAATCGTTTTTAATCGA+AGG - chr1_3:1008347-1008366 Msa0095680:intron 25.0%
! TAGTTGCTACAACTAATATA+AGG + chr1_3:1008500-1008519 None:intergenic 25.0%
! CTTAATAATCTTATCCAAGA+TGG + chr1_3:1008874-1008893 None:intergenic 25.0%
! AGACTAATTATTTCCAAGTT+AGG + chr1_3:1009119-1009138 None:intergenic 25.0%
!!! GGAAATAATTAGTCTTTATG+GGG - chr1_3:1009124-1009143 Msa0095680:CDS 25.0%
!!! GAAATAATTAGTCTTTATGG+GGG - chr1_3:1009125-1009144 Msa0095680:CDS 25.0%
! TGTTATTGATCTTCTCAAAA+GGG - chr1_3:1009217-1009236 Msa0095680:CDS 25.0%
! CTTACAAGATCAATTGTTAA+GGG + chr1_3:1009428-1009447 None:intergenic 25.0%
! ACTTACAAGATCAATTGTTA+AGG + chr1_3:1009429-1009448 None:intergenic 25.0%
!! TAAGTATGCAAATCTGTTTT+GGG - chr1_3:1009444-1009463 Msa0095680:intron 25.0%
!! CCAAATATTAAGCTTTTGTT+AGG + chr1_3:1009580-1009599 None:intergenic 25.0%
! CCTAACAAAAGCTTAATATT+TGG - chr1_3:1009577-1009596 Msa0095680:intron 25.0%
! ATACTTAACTCTGCATTTAT+CGG + chr1_3:1009828-1009847 None:intergenic 25.0%
! CATCAAGCAAATAAATTGTA+CGG + chr1_3:1010080-1010099 None:intergenic 25.0%
!! TTTGAGGTTTGATGTATATT+AGG - chr1_3:1010202-1010221 Msa0095680:intron 25.0%
!!! AAACAGCTATTTCAATGTTT+TGG - chr1_3:1010744-1010763 Msa0095680:intron 25.0%
! ATCTCAAATATATTCTCGAA+AGG + chr1_3:1010955-1010974 None:intergenic 25.0%
! CAAAAATAAAATGTTCCTGT+AGG - chr1_3:1011019-1011038 Msa0095680:intron 25.0%
! TTCCAAATATTTGAATGAGA+AGG - chr1_3:1011073-1011092 Msa0095680:intron 25.0%
! CATTGTGGAGTAAAATATAT+GGG + chr1_3:1011509-1011528 None:intergenic 25.0%
!! CATATATTTTACTCCACAAT+GGG - chr1_3:1011508-1011527 Msa0095680:intron 25.0%
!! ATATATTTTACTCCACAATG+GGG - chr1_3:1011509-1011528 Msa0095680:intron 25.0%
! TACTTAGCACCATATTAAAT+AGG + chr1_3:1011539-1011558 None:intergenic 25.0%
!! TATTTAATATGGTGCTAAGT+AGG - chr1_3:1011538-1011557 Msa0095680:intron 25.0%
! AAGCATTCAAAAATTCATCA+TGG - chr1_3:1011674-1011693 Msa0095680:intron 25.0%
! AATAACGAATTGAGTAACAA+TGG + chr1_3:1011805-1011824 None:intergenic 25.0%
! ATTATGTGATTATTTGACCT+TGG - chr1_3:1011822-1011841 Msa0095680:CDS 25.0%
! AATATAAGATGCATACGAAA+AGG + chr1_3:1012036-1012055 None:intergenic 25.0%
!!! CTTATATTTTTTACTCGAAG+TGG - chr1_3:1012048-1012067 Msa0095680:CDS 25.0%
! ATGACATACTAATAACAACA+TGG + chr1_3:1012180-1012199 None:intergenic 25.0%
! ATTAGTATGTCATAGAATCA+TGG - chr1_3:1012187-1012206 Msa0095680:intron 25.0%
! ATTATCTTAGATCGTTTCAA+AGG - chr1_3:1012402-1012421 Msa0095680:intron 25.0%
! TTCATAATATAAATGGTGAG+TGG - chr1_3:1012490-1012509 Msa0095680:intron 25.0%
! TCATAATATAAATGGTGAGT+GGG - chr1_3:1012491-1012510 Msa0095680:intron 25.0%
! GAAAATAAAATTGGCCAATA+TGG + chr1_3:1012608-1012627 None:intergenic 25.0%
! AATTATACCTTGTAAGCTAT+TGG - chr1_3:1012672-1012691 Msa0095680:intron 25.0%
! TTTATTGGATAGTTAGTAAG+AGG - chr1_3:1012824-1012843 Msa0095680:intron 25.0%
!!! TGAGTTTTGTCTCAATTTTT+AGG - chr1_3:1012851-1012870 Msa0095680:intron 25.0%
!!! AGTTCTCATTTTAACCAAAT+TGG - chr1_3:1013035-1013054 Msa0095680:intron 25.0%
! ATCGTATAACAGTTTGATAA+AGG + chr1_3:1013077-1013096 None:intergenic 25.0%
! TCAAACTGTTATACGATAAA+TGG - chr1_3:1013080-1013099 Msa0095680:intron 25.0%
! CAAACTGTTATACGATAAAT+GGG - chr1_3:1013081-1013100 Msa0095680:intron 25.0%
! TACATAAAATGACATTCCAA+TGG - chr1_3:1013107-1013126 Msa0095680:intron 25.0%
!!! TTCACTTGATGGTTTAATTT+TGG - chr1_3:1013760-1013779 Msa0095680:CDS 25.0%
!!! AAAAAAAAAAAGCATCGTAC+GGG + chr1_3:1013987-1014006 None:intergenic 25.0%
!!! CAAAAAAAAAAAGCATCGTA+CGG + chr1_3:1013988-1014007 None:intergenic 25.0%
GAAATTAAACCATACCTGAA+TGG + chr1_3:1007509-1007528 None:intergenic 30.0%
AGTTATGGATCAGAAAGTAA+TGG - chr1_3:1007639-1007658 Msa0095680:CDS 30.0%
TAAAAAAAGCCAATCCATAC+TGG + chr1_3:1007753-1007772 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG + chr1_3:1007918-1007937 None:intergenic 30.0%
AAGAGAAAGTTGTCAAAAAG+TGG - chr1_3:1007977-1007996 Msa0095680:intron 30.0%
AAAAAGAAACCAATCCAAAC+AGG - chr1_3:1008067-1008086 Msa0095680:intron 30.0%
!! TATTTTTGTCCGTTGAGTTA+AGG + chr1_3:1008109-1008128 None:intergenic 30.0%
!! AATCGTTTTTAATCGAAGGT+TGG - chr1_3:1008351-1008370 Msa0095680:intron 30.0%
GTTTAATGCTAAAAATGGGT+TGG - chr1_3:1008893-1008912 Msa0095680:intron 30.0%
!!! ATTCTGTAGCCTTATTTTTC+TGG - chr1_3:1008951-1008970 Msa0095680:intron 30.0%
ATCTACCAACCAGAAAAATA+AGG + chr1_3:1008963-1008982 None:intergenic 30.0%
! ACAAGTTGAAAAGGAATTCA+AGG - chr1_3:1009085-1009104 Msa0095680:intron 30.0%
!! TTGCTAATTTGTTGCTGAAT+AGG + chr1_3:1009155-1009174 None:intergenic 30.0%
! GTGTTATTGATCTTCTCAAA+AGG - chr1_3:1009216-1009235 Msa0095680:CDS 30.0%
GTTATTGATCTTCTCAAAAG+GGG - chr1_3:1009218-1009237 Msa0095680:CDS 30.0%
GTAAGATTCTTTATCCAAGA+AGG + chr1_3:1009386-1009405 None:intergenic 30.0%
! CAATTGTTAAGGGTTTGTTT+AGG + chr1_3:1009418-1009437 None:intergenic 30.0%
! GTAAGTATGCAAATCTGTTT+TGG - chr1_3:1009443-1009462 Msa0095680:intron 30.0%
ATTTATCCTCATAAACCCTT+TGG + chr1_3:1009548-1009567 None:intergenic 30.0%
TACTTAACTCTGCATTTATC+GGG + chr1_3:1009827-1009846 None:intergenic 30.0%
ATTATATTTGTGGGTTTCAC+TGG - chr1_3:1009938-1009957 Msa0095680:intron 30.0%
AGGTTTGATGTATATTAGGT+TGG - chr1_3:1010206-1010225 Msa0095680:intron 30.0%
!! AAGAATTCCTGCTTTAGAAT+AGG + chr1_3:1010288-1010307 None:intergenic 30.0%
TTAATGATCTATCCTCTGAT+AGG - chr1_3:1010570-1010589 Msa0095680:intron 30.0%
TGATCGTCTATCACATATAA+TGG - chr1_3:1010645-1010664 Msa0095680:intron 30.0%
GAACTTACAAGATCAACATT+TGG + chr1_3:1010805-1010824 None:intergenic 30.0%
CTCCTTCTCATTCAAATATT+TGG + chr1_3:1011078-1011097 None:intergenic 30.0%
TCTAACTAACTCTAACTAAC+TGG + chr1_3:1011226-1011245 None:intergenic 30.0%
! GGTCCCTATCATTAATTTTA+CGG - chr1_3:1011294-1011313 Msa0095680:intron 30.0%
!!! ATAATTTCTTTTGAGGTGCT+GGG + chr1_3:1011351-1011370 None:intergenic 30.0%
!!! AATAATTTCTTTTGAGGTGC+TGG + chr1_3:1011352-1011371 None:intergenic 30.0%
CCATTGTGGAGTAAAATATA+TGG + chr1_3:1011510-1011529 None:intergenic 30.0%
! CCATATATTTTACTCCACAA+TGG - chr1_3:1011507-1011526 Msa0095680:intron 30.0%
! TATATTTTACTCCACAATGG+GGG - chr1_3:1011510-1011529 Msa0095680:intron 30.0%
ACATTCTACAATTCTCCTTT+AGG - chr1_3:1011641-1011660 Msa0095680:intron 30.0%
TTCATAATGTATTACCTGTG+AGG + chr1_3:1011851-1011870 None:intergenic 30.0%
ATTTATCATGAAACATGAGC+TGG + chr1_3:1012155-1012174 None:intergenic 30.0%
ACAAATGTAAAATAACACCG+TGG + chr1_3:1012233-1012252 None:intergenic 30.0%
CTGGATTTGATTAAGATGTT+CGG + chr1_3:1012284-1012303 None:intergenic 30.0%
ATTTAAGCACAATACTTCAC+TGG + chr1_3:1012338-1012357 None:intergenic 30.0%
!! GAAGTATTGTGCTTAAATTG+AGG - chr1_3:1012340-1012359 Msa0095680:intron 30.0%
ATCTTTAGTAGCTTATATGC+TGG - chr1_3:1012377-1012396 Msa0095680:intron 30.0%
! TACTTGTCCATTTTCCATAT+TGG - chr1_3:1012591-1012610 Msa0095680:intron 30.0%
AAATTGGCCAATATGGAAAA+TGG + chr1_3:1012601-1012620 None:intergenic 30.0%
ATCTTACAACAAAGATCTTC+TGG + chr1_3:1012728-1012747 None:intergenic 30.0%
! ATCTTTGTTGTAAGATGTCA+AGG - chr1_3:1012732-1012751 Msa0095680:intron 30.0%
!! CCAACACAGTTTAGAATTTT+TGG + chr1_3:1012764-1012783 None:intergenic 30.0%
CCAAAAATTCTAAACTGTGT+TGG - chr1_3:1012761-1012780 Msa0095680:intron 30.0%
! CTGAAGTTCTCAACTTTTAT+TGG - chr1_3:1012809-1012828 Msa0095680:intron 30.0%
!! TTGTCTCAATTTTTAGGAAC+TGG - chr1_3:1012857-1012876 Msa0095680:intron 30.0%
GAAGTTATTGAGAATATGCT+GGG + chr1_3:1012922-1012941 None:intergenic 30.0%
AGAAGTTATTGAGAATATGC+TGG + chr1_3:1012923-1012942 None:intergenic 30.0%
TATAAGCATGATACTAGAGT+TGG - chr1_3:1012970-1012989 Msa0095680:intron 30.0%
AGTTGGTTATTATGATCATG+AGG - chr1_3:1012987-1013006 Msa0095680:intron 30.0%
ATAAAATGACATTCCAATGG+TGG - chr1_3:1013110-1013129 Msa0095680:intron 30.0%
CAATAATAAATGTCCACCAT+TGG + chr1_3:1013126-1013145 None:intergenic 30.0%
GGACATTTATTATTGATCTC+TGG - chr1_3:1013131-1013150 Msa0095680:intron 30.0%
!! TGAGGAATTTTCTGGTAAAA+CGG - chr1_3:1013526-1013545 Msa0095680:intron 30.0%
TCTGGTAAAACGGATAAATA+TGG - chr1_3:1013536-1013555 Msa0095680:intron 30.0%
ATTAAACCATCAAGTGAAGA+TGG + chr1_3:1013758-1013777 None:intergenic 30.0%
TTCTCCATATCAAGTGATAA+GGG + chr1_3:1013847-1013866 None:intergenic 30.0%
TTTCTCCATATCAAGTGATA+AGG + chr1_3:1013848-1013867 None:intergenic 30.0%
ACTTGATATGGAGAAAGTTA+CGG - chr1_3:1013852-1013871 Msa0095680:CDS 30.0%
!!! CGTACGATGCTTTTTTTTTT+TGG - chr1_3:1013986-1014005 Msa0095680:five_prime_UTR 30.0%
ATAAAGATAAAGGGCCAGTA+TGG - chr1_3:1007736-1007755 Msa0095680:CDS 35.0%
! GTTAAGGACTAGTAGACTTT+GGG + chr1_3:1008093-1008112 None:intergenic 35.0%
! AGTTAAGGACTAGTAGACTT+TGG + chr1_3:1008094-1008113 None:intergenic 35.0%
TCTACTAGTCCTTAACTCAA+CGG - chr1_3:1008097-1008116 Msa0095680:intron 35.0%
AGACTACGACAATAGTCATT+GGG + chr1_3:1008180-1008199 None:intergenic 35.0%
TAGACTACGACAATAGTCAT+TGG + chr1_3:1008181-1008200 None:intergenic 35.0%
CACTTGGACCAATCAATTAT+TGG + chr1_3:1008245-1008264 None:intergenic 35.0%
AGGAATTTGAGCCTTAAGTA+AGG - chr1_3:1008272-1008291 Msa0095680:intron 35.0%
GGAATTTGAGCCTTAAGTAA+GGG - chr1_3:1008273-1008292 Msa0095680:intron 35.0%
GAATTTGAGCCTTAAGTAAG+GGG - chr1_3:1008274-1008293 Msa0095680:intron 35.0%
! TGTTTATTCGCAGCGTTTTT+AGG - chr1_3:1008673-1008692 Msa0095680:intron 35.0%
CAGCACTAGTAAGTATGAAT+TGG + chr1_3:1008703-1008722 None:intergenic 35.0%
!!! TGTAGCCTTATTTTTCTGGT+TGG - chr1_3:1008955-1008974 Msa0095680:intron 35.0%
TTGATTATGGCAGCAAAAGA+AGG - chr1_3:1009018-1009037 Msa0095680:intron 35.0%
TGATTATGGCAGCAAAAGAA+GGG - chr1_3:1009019-1009038 Msa0095680:intron 35.0%
CAGCAACAAATTAGCAAACT+TGG - chr1_3:1009158-1009177 Msa0095680:CDS 35.0%
CAAATTAGCAAACTTGGTAG+TGG - chr1_3:1009164-1009183 Msa0095680:CDS 35.0%
TCAAGTAGGATTTCAAGAAG+CGG - chr1_3:1009298-1009317 Msa0095680:intron 35.0%
ATAAGAGTTTGACGCTTAGA+AGG + chr1_3:1009347-1009366 None:intergenic 35.0%
TATTTAGATTGTGCCTAGTC+TGG - chr1_3:1009510-1009529 Msa0095680:intron 35.0%
!! CTAGTTTCTGGAACAATTTG+AGG + chr1_3:1009730-1009749 None:intergenic 35.0%
! AGACAGAATATGCTAGTTTC+TGG + chr1_3:1009742-1009761 None:intergenic 35.0%
ACTTAACTCTGCATTTATCG+GGG + chr1_3:1009826-1009845 None:intergenic 35.0%
AGAATAGGCATTAGATGCAA+TGG + chr1_3:1010273-1010292 None:intergenic 35.0%
!! TCTAATGCCTATTCTAAAGC+AGG - chr1_3:1010278-1010297 Msa0095680:intron 35.0%
TGGAGTCTTACTGTTATAAG+AGG + chr1_3:1010314-1010333 None:intergenic 35.0%
AGTATAGTGACAAGATTGCA+GGG + chr1_3:1010537-1010556 None:intergenic 35.0%
AAGTATAGTGACAAGATTGC+AGG + chr1_3:1010538-1010557 None:intergenic 35.0%
!! GGCAAAAAGCATTAAATGTG+AGG - chr1_3:1010666-1010685 Msa0095680:intron 35.0%
TTGTGAAATATCTCCATGCA+AGG + chr1_3:1010692-1010711 None:intergenic 35.0%
!! CAGCTATTTCAATGTTTTGG+TGG - chr1_3:1010747-1010766 Msa0095680:intron 35.0%
AACTATCCAGAAACAAGGAA+TGG + chr1_3:1010875-1010894 None:intergenic 35.0%
CAATCAACTATCCAGAAACA+AGG + chr1_3:1010880-1010899 None:intergenic 35.0%
TTCTCGAAAGGTCATAAGAA+TGG + chr1_3:1010943-1010962 None:intergenic 35.0%
TTGTTAACTACATACGACCA+TGG - chr1_3:1010978-1010997 Msa0095680:intron 35.0%
ATAAAATGTTCCTGTAGGTG+TGG - chr1_3:1011024-1011043 Msa0095680:intron 35.0%
TAAAATGTTCCTGTAGGTGT+GGG - chr1_3:1011025-1011044 Msa0095680:intron 35.0%
GTAAAATATATGGGTGCCTA+TGG + chr1_3:1011500-1011519 None:intergenic 35.0%
! ATATTTTACTCCACAATGGG+GGG - chr1_3:1011511-1011530 Msa0095680:intron 35.0%
TTAAGACCATCCACAATGAT+GGG + chr1_3:1011571-1011590 None:intergenic 35.0%
ATTAAGACCATCCACAATGA+TGG + chr1_3:1011572-1011591 None:intergenic 35.0%
GAGATATTTGTTCATCGATC+TGG - chr1_3:1011886-1011905 Msa0095680:CDS 35.0%
AATAGCAGTTCCTTTCTTAC+CGG + chr1_3:1011926-1011945 None:intergenic 35.0%
ATATAGACTATCCATGTGTC+TGG + chr1_3:1012115-1012134 None:intergenic 35.0%
TGAAACATGAGCTGGATTTA+TGG + chr1_3:1012147-1012166 None:intergenic 35.0%
CAGATATAGAAAACACAGAC+TGG + chr1_3:1012303-1012322 None:intergenic 35.0%
ACACATGAATCCAAGTTTGA+TGG - chr1_3:1012449-1012468 Msa0095680:intron 35.0%
CACATGAATCCAAGTTTGAT+GGG - chr1_3:1012450-1012469 Msa0095680:intron 35.0%
TAATATAAATGGTGAGTGGG+AGG - chr1_3:1012494-1012513 Msa0095680:intron 35.0%
AATATAAATGGTGAGTGGGA+GGG - chr1_3:1012495-1012514 Msa0095680:intron 35.0%
GGAAAATGGACAAGTATTAC+TGG + chr1_3:1012587-1012606 None:intergenic 35.0%
ATTCAAACAGGTGTAAAGCA+TGG + chr1_3:1012893-1012912 None:intergenic 35.0%
TGGTTATTATGATCATGAGG+TGG - chr1_3:1012990-1013009 Msa0095680:intron 35.0%
TCAATTGTGTGCTACCAATT+TGG + chr1_3:1013052-1013071 None:intergenic 35.0%
! AAATTGGTAGCACACAATTG+AGG - chr1_3:1013051-1013070 Msa0095680:intron 35.0%
! CGCTTCTATGCTAACATTTT+AGG - chr1_3:1013252-1013271 Msa0095680:intron 35.0%
GGTAAAACGGATAAATATGG+TGG - chr1_3:1013539-1013558 Msa0095680:intron 35.0%
AAAACGGATAAATATGGTGG+TGG - chr1_3:1013542-1013561 Msa0095680:intron 35.0%
! AAGTTTAGCTCAGGTAAATC+TGG - chr1_3:1013602-1013621 Msa0095680:intron 35.0%
! AGTTTAGCTCAGGTAAATCT+GGG - chr1_3:1013603-1013622 Msa0095680:intron 35.0%
! ATTATTTGGCTTATCCCCAA+AGG + chr1_3:1013688-1013707 None:intergenic 35.0%
CACTTTCCAGGAGTTAAAAT+GGG + chr1_3:1013731-1013750 None:intergenic 35.0%
GCTTGAAGTTATACTAGATG+AGG + chr1_3:1013811-1013830 None:intergenic 35.0%
TATCAAGTGATAAGGGGATT+AGG + chr1_3:1013840-1013859 None:intergenic 35.0%
AATCCCCTTATCACTTGATA+TGG - chr1_3:1013840-1013859 Msa0095680:CDS 35.0%
TCTCCATATCAAGTGATAAG+GGG + chr1_3:1013846-1013865 None:intergenic 35.0%
GAATGATACATTCTGCTTTG+AGG - chr1_3:1013880-1013899 Msa0095680:CDS 35.0%
! TTGAGGCATGCAATTTTTCT+TGG - chr1_3:1013897-1013916 Msa0095680:CDS 35.0%
GCTTGTCATTGGAAGAGAAA+TGG + chr1_3:1007155-1007174 None:intergenic 40.0%
GATCCTCTTCCATATTCTCA+CGG - chr1_3:1007188-1007207 Msa0095680:three_prime_UTR 40.0%
! TGTCAATGGTGATGAAGGAT+TGG - chr1_3:1007411-1007430 Msa0095680:three_prime_UTR 40.0%
TAAAGAGATCGTGAATGCGT+TGG - chr1_3:1007456-1007475 Msa0095680:three_prime_UTR 40.0%
AAAGAGATCGTGAATGCGTT+GGG - chr1_3:1007457-1007476 Msa0095680:three_prime_UTR 40.0%
! AGCTATTTCCCATTCAGGTA+TGG - chr1_3:1007497-1007516 Msa0095680:CDS 40.0%
! AATTGATTGGTCCAAGTGAG+TGG - chr1_3:1008247-1008266 Msa0095680:intron 40.0%
CAAATTCCTTACCACTCACT+TGG + chr1_3:1008261-1008280 None:intergenic 40.0%
ATAATAACAGACACACGCAC+AGG + chr1_3:1008604-1008623 None:intergenic 40.0%
TTTATTGTAGAGAGCTGTGC+TGG - chr1_3:1008773-1008792 Msa0095680:intron 40.0%
! ACTGGGAAAACTCTTGCTTT+TGG - chr1_3:1008843-1008862 Msa0095680:intron 40.0%
!! CTGGGAAAACTCTTGCTTTT+GGG - chr1_3:1008844-1008863 Msa0095680:intron 40.0%
! ACTTGCACGACAAGTTGAAA+AGG - chr1_3:1009076-1009095 Msa0095680:intron 40.0%
AGTGGCGTAGATATTGTAGT+CGG - chr1_3:1009182-1009201 Msa0095680:CDS 40.0%
AGAAGATCAATAACACGTCC+AGG + chr1_3:1009212-1009231 None:intergenic 40.0%
GCGTCAAACTCTTATGTTCT+CGG - chr1_3:1009352-1009371 Msa0095680:intron 40.0%
!! ATGCAAATCTGTTTTGGGCA+TGG - chr1_3:1009449-1009468 Msa0095680:intron 40.0%
! TGCCTAGTCTGGTAATGATA+TGG - chr1_3:1009521-1009540 Msa0095680:intron 40.0%
! GCCTAGTCTGGTAATGATAT+GGG - chr1_3:1009522-1009541 Msa0095680:intron 40.0%
! TGGTAATGATATGGGCCAAA+GGG - chr1_3:1009530-1009549 Msa0095680:intron 40.0%
CTATGTAGACCATTGTAGCT+GGG - chr1_3:1009864-1009883 Msa0095680:intron 40.0%
AAAAATTCGCCCAGCTACAA+TGG + chr1_3:1009876-1009895 None:intergenic 40.0%
! TTGTAGCTGGGCGAATTTTT+AGG - chr1_3:1009876-1009895 Msa0095680:intron 40.0%
TGGAGATTCTGATCAGAAGT+TGG - chr1_3:1010226-1010245 Msa0095680:intron 40.0%
CTTTAGCATGTTCCTATCAG+AGG + chr1_3:1010585-1010604 None:intergenic 40.0%
CTCTGATAGGAACATGCTAA+AGG - chr1_3:1010583-1010602 Msa0095680:intron 40.0%
TGATAGGAACATGCTAAAGG+AGG - chr1_3:1010586-1010605 Msa0095680:intron 40.0%
ATTAAATGTGAGGCCTTGCA+TGG - chr1_3:1010676-1010695 Msa0095680:intron 40.0%
CAGAGAGAAAGAACTCTTAC+TGG - chr1_3:1010715-1010734 Msa0095680:intron 40.0%
ATTTGGTATATCAAGCCCAC+GGG + chr1_3:1010788-1010807 None:intergenic 40.0%
CATTTGGTATATCAAGCCCA+CGG + chr1_3:1010789-1010808 None:intergenic 40.0%
! TCACTTCCATTCCTTGTTTC+TGG - chr1_3:1010866-1010885 Msa0095680:CDS 40.0%
TCGAAAGGTCATAAGAATGG+AGG + chr1_3:1010940-1010959 None:intergenic 40.0%
TAGTTAGCATTGCCTACACT+AGG + chr1_3:1011181-1011200 None:intergenic 40.0%
ACCCAAAAATGGGTGCTTAT+AGG - chr1_3:1011262-1011281 Msa0095680:intron 40.0%
!! CCCTATAAGCACCCATTTTT+GGG + chr1_3:1011266-1011285 None:intergenic 40.0%
CCCAAAAATGGGTGCTTATA+GGG - chr1_3:1011263-1011282 Msa0095680:intron 40.0%
CCAAAAATGGGTGCTTATAG+GGG - chr1_3:1011264-1011283 Msa0095680:intron 40.0%
! TCTCTCTCTTCAATTTTCGC+GGG + chr1_3:1011453-1011472 None:intergenic 40.0%
! CTCTCTCTCTTCAATTTTCG+CGG + chr1_3:1011454-1011473 None:intergenic 40.0%
GCGAAAATTGAAGAGAGAGA+GGG - chr1_3:1011453-1011472 Msa0095680:intron 40.0%
TATTACCTGTGAGGAAACCA+AGG + chr1_3:1011842-1011861 None:intergenic 40.0%
TCCACACAGAAAATCAATCC+AGG - chr1_3:1011950-1011969 Msa0095680:CDS 40.0%
CCACACAGAAAATCAATCCA+GGG - chr1_3:1011951-1011970 Msa0095680:CDS 40.0%
CTCAATTGTCTTTACATCCC+TGG + chr1_3:1011971-1011990 None:intergenic 40.0%
AAGACAATTGAGAGAGACGT+TGG - chr1_3:1011979-1011998 Msa0095680:CDS 40.0%
CGTTGGATGTAAATTCACAG+AGG - chr1_3:1011996-1012015 Msa0095680:CDS 40.0%
TGGATGTAAATTCACAGAGG+TGG - chr1_3:1011999-1012018 Msa0095680:CDS 40.0%
!! CTAATTTGTTGCCAGACACA+TGG - chr1_3:1012101-1012120 Msa0095680:intron 40.0%
GTAAAGTAGCCCATCAAACT+TGG + chr1_3:1012462-1012481 None:intergenic 40.0%
ACAACAAAGATCTTCTGGTC+TGG + chr1_3:1012723-1012742 None:intergenic 40.0%
!! CTAAACTGTGTTGGTTTGCT+TGG - chr1_3:1012770-1012789 Msa0095680:intron 40.0%
TGCTTGGAAGTGATCTCAAA+AGG - chr1_3:1012786-1012805 Msa0095680:intron 40.0%
CCACTTTCAACAGCAATCTT+TGG + chr1_3:1013350-1013369 None:intergenic 40.0%
! CCAAAGATTGCTGTTGAAAG+TGG - chr1_3:1013347-1013366 Msa0095680:intron 40.0%
!! TCAAGTAGTAGTTCTGGATC+TGG - chr1_3:1013437-1013456 Msa0095680:intron 40.0%
TGGATTTCCCATAGCCATTT+CGG + chr1_3:1013463-1013482 None:intergenic 40.0%
! TATGGGAAATCCAGTGGTTT+TGG - chr1_3:1013470-1013489 Msa0095680:intron 40.0%
TCAGGTAAATCTGGGAGATA+TGG - chr1_3:1013611-1013630 Msa0095680:intron 40.0%
AGAAATTGAAGCCAGAACCT+AGG - chr1_3:1013638-1013657 Msa0095680:CDS 40.0%
GCACTTTCCAGGAGTTAAAA+TGG + chr1_3:1013732-1013751 None:intergenic 40.0%
CTGAGAATCGTGCTTGTCAT+TGG + chr1_3:1007166-1007185 None:intergenic 45.0%
GAAGAAACGCCGTGAGAATA+TGG + chr1_3:1007200-1007219 None:intergenic 45.0%
ACGGATCGGAAGTTGTTCAA+CGG + chr1_3:1007230-1007249 None:intergenic 45.0%
AAGAGATCGTGAATGCGTTG+GGG - chr1_3:1007458-1007477 Msa0095680:three_prime_UTR 45.0%
TGAATGCGTTGGGGAAGAAA+GGG - chr1_3:1007467-1007486 Msa0095680:three_prime_UTR 45.0%
! CGCAAAGCTATTTCCCATTC+AGG - chr1_3:1007492-1007511 Msa0095680:CDS 45.0%
GATAAAGGGCCAGTATGGAT+TGG - chr1_3:1007741-1007760 Msa0095680:CDS 45.0%
TAGTAGACTTTGGGCCTGTT+TGG + chr1_3:1008084-1008103 None:intergenic 45.0%
ATTGGTCCAAGTGAGTGGTA+AGG - chr1_3:1008252-1008271 Msa0095680:intron 45.0%
GCTGCGAATAAACACTGTGT+TGG + chr1_3:1008667-1008686 None:intergenic 45.0%
ATGCAAGGGAGGGATATGAT+TGG - chr1_3:1008804-1008823 Msa0095680:intron 45.0%
! AGTTTTCCCAGTTCCTGTTC+TGG + chr1_3:1008835-1008854 None:intergenic 45.0%
!!! TGCTTTTGGGATACCCATCT+TGG - chr1_3:1008857-1008876 Msa0095680:intron 45.0%
TGTCGTGCAAGTTCTCTAGT+TGG + chr1_3:1009068-1009087 None:intergenic 45.0%
AAGGGGTTCACTGAAACTGA+AGG - chr1_3:1009235-1009254 Msa0095680:CDS 45.0%
GCTGATCAGATGCTTCAAGT+AGG - chr1_3:1009284-1009303 Msa0095680:intron 45.0%
AGTAGGATTTCAAGAAGCGG+TGG - chr1_3:1009301-1009320 Msa0095680:intron 45.0%
GCCCATATCATTACCAGACT+AGG + chr1_3:1009526-1009545 None:intergenic 45.0%
! CTGGTAATGATATGGGCCAA+AGG - chr1_3:1009529-1009548 Msa0095680:intron 45.0%
TATGGGCCAAAGGGTTTATG+AGG - chr1_3:1009539-1009558 Msa0095680:intron 45.0%
GCTATGTAGACCATTGTAGC+TGG - chr1_3:1009863-1009882 Msa0095680:intron 45.0%
TCTGATCAGAAGTTGGCAGA+TGG - chr1_3:1010233-1010252 Msa0095680:intron 45.0%
TAGACGATCAGCATCACGTT+TGG + chr1_3:1010635-1010654 None:intergenic 45.0%
AACTACATACGACCATGGTG+TGG - chr1_3:1010983-1011002 Msa0095680:intron 45.0%
TGGAAATATCCCACACCTAC+AGG + chr1_3:1011037-1011056 None:intergenic 45.0%
!!! CATTTTTGGGTGCTCTGTTG+CGG + chr1_3:1011253-1011272 None:intergenic 45.0%
! GCAACAGAGCACCCAAAAAT+GGG - chr1_3:1011252-1011271 Msa0095680:intron 45.0%
! CCCCTATAAGCACCCATTTT+TGG + chr1_3:1011267-1011286 None:intergenic 45.0%
!!! TTTCTTTTGAGGTGCTGGGT+TGG + chr1_3:1011347-1011366 None:intergenic 45.0%
CGCGAAAATTGAAGAGAGAG+AGG - chr1_3:1011452-1011471 Msa0095680:intron 45.0%
CCTATGGAGAATGGTAGCTA+TGG + chr1_3:1011484-1011503 None:intergenic 45.0%
CCATAGCTACCATTCTCCAT+AGG - chr1_3:1011481-1011500 Msa0095680:intron 45.0%
ATATGGGTGCCTATGGAGAA+TGG + chr1_3:1011493-1011512 None:intergenic 45.0%
!! TGGGGGGTGCCTATTTAATA+TGG - chr1_3:1011527-1011546 Msa0095680:intron 45.0%
AGGTTAAGCACCCATCATTG+TGG - chr1_3:1011558-1011577 Msa0095680:intron 45.0%
TAAGCACCCATCATTGTGGA+TGG - chr1_3:1011562-1011581 Msa0095680:intron 45.0%
TGCTTAGCAGAAGCTCCTAA+AGG + chr1_3:1011659-1011678 None:intergenic 45.0%
TTTGACCTTGGTTTCCTCAC+AGG - chr1_3:1011834-1011853 Msa0095680:CDS 45.0%
!! CCCTGGATTGATTTTCTGTG+TGG + chr1_3:1011954-1011973 None:intergenic 45.0%
ACCTTGTAAGCTATTGGTGC+TGG - chr1_3:1012678-1012697 Msa0095680:intron 45.0%
TCCAGCACCAATAGCTTACA+AGG + chr1_3:1012682-1012701 None:intergenic 45.0%
! TTGATCTCTGGTGTTGAGTG+TGG - chr1_3:1013143-1013162 Msa0095680:intron 45.0%
AGTGGATCAGCAGACATGTT+TGG - chr1_3:1013365-1013384 Msa0095680:intron 45.0%
ATGTTTGGCAGCATGAGTAG+TGG - chr1_3:1013380-1013399 Msa0095680:intron 45.0%
AGCATGAGTAGTGGTCGATA+CGG - chr1_3:1013389-1013408 Msa0095680:intron 45.0%
CGTCGATCAAGTAGTAGTTC+TGG - chr1_3:1013431-1013450 Msa0095680:intron 45.0%
AATGGCTATGGGAAATCCAG+TGG - chr1_3:1013464-1013483 Msa0095680:intron 45.0%
!!! GTTTTGGTGGCTCTAGTTCA+AGG - chr1_3:1013486-1013505 Msa0095680:intron 45.0%
! TCTAGTTCAAGGAAGTCAGG+AGG - chr1_3:1013497-1013516 Msa0095680:intron 45.0%
CTAGTTCAAGGAAGTCAGGA+GGG - chr1_3:1013498-1013517 Msa0095680:intron 45.0%
TAGTTCAAGGAAGTCAGGAG+GGG - chr1_3:1013499-1013518 Msa0095680:intron 45.0%
! GGGGGATTTGAGGAATTTTC+TGG - chr1_3:1013518-1013537 Msa0095680:intron 45.0%
!! ACGGATAAATATGGTGGTGG+AGG - chr1_3:1013545-1013564 Msa0095680:intron 45.0%
GCTAAACTTTCCAAAGCCAC+TGG + chr1_3:1013591-1013610 None:intergenic 45.0%
!! GGCTTTGGAAAGTTTAGCTC+AGG - chr1_3:1013593-1013612 Msa0095680:intron 45.0%
!!! AGGAAGCCCATTTTAACTCC+TGG - chr1_3:1013722-1013741 Msa0095680:CDS 45.0%
TCATCCTGAATTCCATCCAC+AGG - chr1_3:1013932-1013951 Msa0095680:CDS 45.0%
CTTTCCTGTGGATGGAATTC+AGG + chr1_3:1013939-1013958 None:intergenic 45.0%
!! AAAAAAAGCATCGTACGGGC+TGG + chr1_3:1013983-1014002 None:intergenic 45.0%
!!! TCTTTATTTATTTATTTTAT+TGG + chr1_3:1008208-1008227 None:intergenic 5.0%
!!! ATTACTTTATAATATTTTTT+TGG - chr1_3:1010030-1010049 Msa0095680:intron 5.0%
!! TTTATTAAGATTTATTAAAT+AGG - chr1_3:1011426-1011445 Msa0095680:intron 5.0%
ACGCCGTGAGAATATGGAAG+AGG + chr1_3:1007194-1007213 None:intergenic 50.0%
GATCGGAAGTTGTTCAACGG+CGG + chr1_3:1007227-1007246 None:intergenic 50.0%
CTCTCCTACTTTGCCGTTGA+CGG + chr1_3:1007281-1007300 None:intergenic 50.0%
TCAACGGCAAAGTAGGAGAG+AGG - chr1_3:1007281-1007300 Msa0095680:three_prime_UTR 50.0%
! AGGCTGTTTCACGCGAAATC+TGG - chr1_3:1007301-1007320 Msa0095680:three_prime_UTR 50.0%
AGCGACGAGTGGAAGTTCAA+CGG + chr1_3:1007328-1007347 None:intergenic 50.0%
! TGCTGTGGATTACGATCACG+CGG - chr1_3:1007369-1007388 Msa0095680:three_prime_UTR 50.0%
! GATGATGGTTGCGGTGTCAA+TGG - chr1_3:1007397-1007416 Msa0095680:three_prime_UTR 50.0%
! TGCGGTGTCAATGGTGATGA+AGG - chr1_3:1007406-1007425 Msa0095680:three_prime_UTR 50.0%
GATTGGAGATCGCGAAGCTT+GGG - chr1_3:1007428-1007447 Msa0095680:three_prime_UTR 50.0%
GTGAATGCGTTGGGGAAGAA+AGG - chr1_3:1007466-1007485 Msa0095680:three_prime_UTR 50.0%
GACTTTGGGCCTGTTTGGAT+TGG + chr1_3:1008079-1008098 None:intergenic 50.0%
GAACTCACATACGCAAGTGG+AGG + chr1_3:1008158-1008177 None:intergenic 50.0%
TGGGAACTCACATACGCAAG+TGG + chr1_3:1008161-1008180 None:intergenic 50.0%
TGAGCCTTAAGTAAGGGGTC+AGG - chr1_3:1008279-1008298 Msa0095680:intron 50.0%
GAGCCTTAAGTAAGGGGTCA+GGG - chr1_3:1008280-1008299 Msa0095680:intron 50.0%
AGCCTTAAGTAAGGGGTCAG+GGG - chr1_3:1008281-1008300 Msa0095680:intron 50.0%
AACCCCTGACCCCTTACTTA+AGG + chr1_3:1008286-1008305 None:intergenic 50.0%
TGCTGGAACCTGCAATGCAA+GGG - chr1_3:1008790-1008809 Msa0095680:intron 50.0%
ATATCCCTCCCTTGCATTGC+AGG + chr1_3:1008801-1008820 None:intergenic 50.0%
! ATGATTGGTCGAGCCAGAAC+AGG - chr1_3:1008819-1008838 Msa0095680:intron 50.0%
CAGCAAAAGAAGGGATCCTC+TGG - chr1_3:1009028-1009047 Msa0095680:intron 50.0%
! AAGAAGGGATCCTCTGGCTT+TGG - chr1_3:1009034-1009053 Msa0095680:intron 50.0%
CAAGGATGCTGCACCTAACT+TGG - chr1_3:1009103-1009122 Msa0095680:intron 50.0%
GATATTGTAGTCGGCACACC+TGG - chr1_3:1009191-1009210 Msa0095680:CDS 50.0%
TCTCGGCAACAATGCCTTCT+TGG - chr1_3:1009369-1009388 Msa0095680:intron 50.0%
!! CTGTTTTGGGCATGGCAAGT+AGG - chr1_3:1009457-1009476 Msa0095680:intron 50.0%
! TTTTGGGCATGGCAAGTAGG+AGG - chr1_3:1009460-1009479 Msa0095680:intron 50.0%
CTGCATTTATCGGGGAGACA+GGG + chr1_3:1009818-1009837 None:intergenic 50.0%
TCTGCATTTATCGGGGAGAC+AGG + chr1_3:1009819-1009838 None:intergenic 50.0%
! CAACTGATGTTGCTTCCCGT+GGG - chr1_3:1010770-1010789 Msa0095680:intron 50.0%
TACTCAACGGTACCACACCA+TGG + chr1_3:1010998-1011017 None:intergenic 50.0%
TGCTCGTTAGGACCTAGTGT+AGG - chr1_3:1011166-1011185 Msa0095680:intron 50.0%
! CGCAACAGAGCACCCAAAAA+TGG - chr1_3:1011251-1011270 Msa0095680:intron 50.0%
GGTGCTTATAGGGGTCATCT+GGG - chr1_3:1011273-1011292 Msa0095680:intron 50.0%
! GGTGCTGGGTTGGAGAAAAT+TGG + chr1_3:1011337-1011356 None:intergenic 50.0%
TAAATAGGCACCCCCCATTG+TGG + chr1_3:1011524-1011543 None:intergenic 50.0%
GTTCATCGATCTGGACGAAC+AGG - chr1_3:1011895-1011914 Msa0095680:CDS 50.0%
! GCTGGGCAAAGCATTCAAAC+AGG + chr1_3:1012905-1012924 None:intergenic 50.0%
TAGTGGTCGATACGGCTCTT+CGG - chr1_3:1013397-1013416 Msa0095680:intron 50.0%
!! AGTTCTGGATCTGGCCGAAA+TGG - chr1_3:1013446-1013465 Msa0095680:intron 50.0%
GATCTGGCCGAAATGGCTAT+GGG - chr1_3:1013453-1013472 Msa0095680:intron 50.0%
!!! GGGAAATCCAGTGGTTTTGG+TGG - chr1_3:1013473-1013492 Msa0095680:intron 50.0%
ACTAGAGCCACCAAAACCAC+TGG + chr1_3:1013483-1013502 None:intergenic 50.0%
! GGCTCTAGTTCAAGGAAGTC+AGG - chr1_3:1013494-1013513 Msa0095680:intron 50.0%
AGTTCAAGGAAGTCAGGAGG+GGG - chr1_3:1013500-1013519 Msa0095680:intron 50.0%
AGCAGTTCAAGTCGTTCCAG+TGG - chr1_3:1013572-1013591 Msa0095680:intron 50.0%
TCAAGTCGTTCCAGTGGCTT+TGG - chr1_3:1013578-1013597 Msa0095680:intron 50.0%
GCCAGAACCTAGGAGATTCA+AGG - chr1_3:1013648-1013667 Msa0095680:CDS 50.0%
GCCTTGAATCTCCTAGGTTC+TGG + chr1_3:1013652-1013671 None:intergenic 50.0%
GTCACAGCCTTGAATCTCCT+AGG + chr1_3:1013658-1013677 None:intergenic 50.0%
GCTGTGACTTTGCTGCCTTT+GGG - chr1_3:1013670-1013689 Msa0095680:CDS 50.0%
CTGTGACTTTGCTGCCTTTG+GGG - chr1_3:1013671-1013690 Msa0095680:CDS 50.0%
TGCACGCCATCTTCACTTGA+TGG - chr1_3:1013749-1013768 Msa0095680:CDS 50.0%
CCTACTCACTTTCCTGTGGA+TGG + chr1_3:1013947-1013966 None:intergenic 50.0%
CCATCCACAGGAAAGTGAGT+AGG - chr1_3:1013944-1013963 Msa0095680:CDS 50.0%
CACTCCTACTCACTTTCCTG+TGG + chr1_3:1013951-1013970 None:intergenic 50.0%
ACAAGGCGAGGCTACTGTGA+CGG + chr1_3:1007249-1007268 None:intergenic 55.0%
TTGTTGTCCTCCGCCGTCAA+CGG - chr1_3:1007265-1007284 Msa0095680:three_prime_UTR 55.0%
TCCTACTTTGCCGTTGACGG+CGG + chr1_3:1007278-1007297 None:intergenic 55.0%
GTTGAACTTCCACTCGTCGC+TGG - chr1_3:1007327-1007346 Msa0095680:three_prime_UTR 55.0%
GATCACGCGGAACACGATGA+TGG - chr1_3:1007382-1007401 Msa0095680:three_prime_UTR 55.0%
! GCGGAACACGATGATGGTTG+CGG - chr1_3:1007388-1007407 Msa0095680:three_prime_UTR 55.0%
GGATTGGAGATCGCGAAGCT+TGG - chr1_3:1007427-1007446 Msa0095680:three_prime_UTR 55.0%
ACATACGCAAGTGGAGGAGC+TGG + chr1_3:1008152-1008171 None:intergenic 55.0%
GTGCTGGAACCTGCAATGCA+AGG - chr1_3:1008789-1008808 Msa0095680:intron 55.0%
TGGAACCTGCAATGCAAGGG+AGG - chr1_3:1008793-1008812 Msa0095680:intron 55.0%
GGAACCTGCAATGCAAGGGA+GGG - chr1_3:1008794-1008813 Msa0095680:intron 55.0%
GTCGAGCCAGAACAGGAACT+GGG - chr1_3:1008826-1008845 Msa0095680:intron 55.0%
GGTGCTAACACCAAAGCCAG+AGG + chr1_3:1009047-1009066 None:intergenic 55.0%
! GCAACTGATGTTGCTTCCCG+TGG - chr1_3:1010769-1010788 Msa0095680:intron 55.0%
CACTAGGTCCTAACGAGCAC+AGG + chr1_3:1011165-1011184 None:intergenic 55.0%
TTTGGGTGCTCTGTTGCGGA+TGG + chr1_3:1011249-1011268 None:intergenic 55.0%
GGGTGCTTATAGGGGTCATC+TGG - chr1_3:1011272-1011291 Msa0095680:intron 55.0%
! ACAGGACGTGCCGGTAAGAA+AGG - chr1_3:1011913-1011932 Msa0095680:CDS 55.0%
AGTGGTCGATACGGCTCTTC+GGG - chr1_3:1013398-1013417 Msa0095680:intron 55.0%
ATACGGCTCTTCGGGAGGTA+GGG - chr1_3:1013406-1013425 Msa0095680:intron 55.0%
GGATCTGGCCGAAATGGCTA+TGG - chr1_3:1013452-1013471 Msa0095680:intron 55.0%
GAAGTCAGGAGGGGGATTTG+AGG - chr1_3:1013508-1013527 Msa0095680:intron 55.0%
GGCTGTGACTTTGCTGCCTT+TGG - chr1_3:1013669-1013688 Msa0095680:CDS 55.0%
GAAGATGGCGTGCACTTTCC+AGG + chr1_3:1013743-1013762 None:intergenic 55.0%
!! GCGAGGCTACTGTGACGGAT+CGG + chr1_3:1007244-1007263 None:intergenic 60.0%
GTTGACGGCGGAGGACAACA+AGG + chr1_3:1007266-1007285 None:intergenic 60.0%
TACTTTGCCGTTGACGGCGG+AGG + chr1_3:1007275-1007294 None:intergenic 60.0%
TCCGCCGTCAACGGCAAAGT+AGG - chr1_3:1007274-1007293 Msa0095680:three_prime_UTR 60.0%
CACGAGATACCAGCGACGAG+TGG + chr1_3:1007339-1007358 None:intergenic 60.0%
CACTCGTCGCTGGTATCTCG+TGG - chr1_3:1007337-1007356 Msa0095680:three_prime_UTR 60.0%
GGTCGAGCCAGAACAGGAAC+TGG - chr1_3:1008825-1008844 Msa0095680:intron 60.0%
CGTGCTCACCTGTGCTCGTT+AGG - chr1_3:1011154-1011173 Msa0095680:intron 60.0%
TCTGGACGAACAGGACGTGC+CGG - chr1_3:1011904-1011923 Msa0095680:CDS 60.0%
GATACGGCTCTTCGGGAGGT+AGG - chr1_3:1013405-1013424 Msa0095680:intron 60.0%
!! TCGTGGTGCGCAGCTTGCTG+TGG - chr1_3:1007354-1007373 Msa0095680:three_prime_UTR 65.0%
GGTCGATACGGCTCTTCGGG+AGG - chr1_3:1013401-1013420 Msa0095680:intron 65.0%
CGGCGGAGGACAACAAGGCG+AGG + chr1_3:1007261-1007280 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 1007112 1014021 1007112 ID=Msa0095680;Name=Msa0095680
chr1_3 mRNA 1007112 1014021 1007112 ID=Msa0095680-mRNA-1;Parent=Msa0095680;Name=Msa0095680-mRNA-1;_AED=0.06;_eAED=0.06;_QI=54|1|1|1|1|1|7|375|558
chr1_3 exon 1007112 1007789 1007112 ID=Msa0095680-mRNA-1:exon:136;Parent=Msa0095680-mRNA-1
chr1_3 exon 1009116 1009277 1009116 ID=Msa0095680-mRNA-1:exon:135;Parent=Msa0095680-mRNA-1
chr1_3 exon 1010317 1010541 1010317 ID=Msa0095680-mRNA-1:exon:134;Parent=Msa0095680-mRNA-1
chr1_3 exon 1010811 1010909 1010811 ID=Msa0095680-mRNA-1:exon:133;Parent=Msa0095680-mRNA-1
chr1_3 exon 1011691 1012102 1011691 ID=Msa0095680-mRNA-1:exon:132;Parent=Msa0095680-mRNA-1
chr1_3 exon 1012223 1012350 1012223 ID=Msa0095680-mRNA-1:exon:131;Parent=Msa0095680-mRNA-1
chr1_3 exon 1013620 1014021 1013620 ID=Msa0095680-mRNA-1:exon:130;Parent=Msa0095680-mRNA-1
chr1_3 five_prime_UTR 1013968 1014021 1013968 ID=Msa0095680-mRNA-1:five_prime_utr;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1013620 1013967 1013620 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1012223 1012350 1012223 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1011691 1012102 1011691 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1010811 1010909 1010811 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1010317 1010541 1010317 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1009116 1009277 1009116 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 CDS 1007487 1007789 1007487 ID=Msa0095680-mRNA-1:cds;Parent=Msa0095680-mRNA-1
chr1_3 three_prime_UTR 1007112 1007486 1007112 ID=Msa0095680-mRNA-1:three_prime_utr;Parent=Msa0095680-mRNA-1
Gene Sequence

>Msa0095680

ATGACAAGCACGATTCTCAGAAGATCCTCTTCCATATTCTCACGGCGTTTCTTCGTCGCCGCCGTTGAACAACTTCCGATCCGTCACAGTAGCCTCGCCTTGTTGTCCTCCGCCGTCAACGGCAAAGTAGGAGAGAGGCTGTTTCACGCGAAATCTGGACCGTTGAACTTCCACTCGTCGCTGGTATCTCGTGGTGCGCAGCTTGCTGTGGATTACGATCACGCGGAACACGATGATGGTTGCGGTGTCAATGGTGATGAAGGATTGGAGATCGCGAAGCTTGGGATTTCTAAAGAGATCGTGAATGCGTTGGGGAAGAAAGGGATCGCAAAGCTATTTCCCATTCAGAGAGCTGTGCTGGAACCTGCAATGCAAGGGAGGGATATGATTGGTCGAGCCAGAACAGGAACTGGGAAAACTCTTGCTTTTGGGATACCCATCTTGGATAAGATTATTAAGTTTAATGCTAAAAATGGCAAAAGAAGGGATCCTCTGGCTTTGGTGTTAGCACCAACTAGAGAACTTGCACGACAAGTTGAAAAGGAATTCAAGGATGCTGCACCTAACTTGGAAATAATTAGTCTTTATGGGGGCATGCCTATTCAGCAACAAATTAGCAAACTTGGTAGTGGCGTAGATATTGTAGTCGGCACACCTGGACGTGTTATTGATCTTCTCAAAAGGGGTTCACTGAAACTGAAGGATGTTAATTATGTTGTTCTTGATGAAGCTGATCAGATGCTTCAAGTAGGATTTCAAGAAGCGGTGGAGACTATCTTGCAGAAGTTGCCTTCTAAGCGTCAAACTCTTATGTTCTCGGCAACAATGCCTTCTTGGATAAAGAATCTTACGCGCAATTACCTAAACAAACCCTTAACAATTGATCTTGTTGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCACTGTACTCCATTGCATCTAATGCCTATTCTAAAGCAGGAATTCTTGCACCTCTTATAACAGAACATGCTAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGTCTATCACATATAATGGCAAAAAGCATTAAATGTGAGGCCTTGCATGGAGATATTTCACAAACTCAGAGAGAAAGAACTCTTACTGGCTTTAGAAACAGCTATTTCAATGTTTTGGTGGCAACTGATGTTGCTTCCCGTGGGCTTGATATACCAAATGTTGATCTTGTAATACATTATGAACTTCCAAATAATTCAGAGATATTTGTTCATCGATCTGGACGAACAGGACGTGCCGGTAAGAAAGGAACTGCTATTCTTGTCCACACAGAAAATCAATCCAGGGATGTAAAGACAATTGAGAGAGACGTTGGATGTAAATTCACAGAGTTACCAAAGATTGCTGTTGAAAGTGGATCAGCAGACATGTTTGGCAGCATGAGTAGTGGTCGATACGGCTCTTCGGGAGGTAGGGATCGTCGATCAAGTAGTAGTTCTGGATCTGGCCGAAATGGCTATGGGAAATCCAGTGGTTTTGGTGGCTCTAGTTCAAGGAAGTCAGGAGGGGGATTTGAGGAATTTTCTGGTAAAACGGATAAATATGGTGGTGGAGGATTTAGCAGTTCAAGTCGTTCCAGTGGCTTTGGAAAGTTTAGCTCAGGTAAATCTGGGAGATATGGTGACAGAAATTGA
Protein sequence

>Msa0095680

MTSTILRRSSSIFSRRFFVAAVEQLPIRHSSLALLSSAVNGKVGERLFHAKSGPLNFHSSLVSRGAQLAVDYDHAEHDDGCGVNGDEGLEIAKLGISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLALVLAPTRELARQVEKEFKDAAPNLEIISLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPSKRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILAPLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCEALHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERDVGCKFTELPKIAVESGSADMFGSMSSGRYGSSGGRDRRSSSSSGSGRNGYGKSSGFGGSSSRKSGGGFEEFSGKTDKYGGGGFSSSSRSSGFGKFSSGKSGRYGDRN*