Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100010 | XP_013450567.1 | 98.617 | 723 | 9 | 1 | 1 | 723 | 1 | 722 | 0.0 | 1474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100010 | sp|P56287|EI2BE_SCHPO | 32.378 | 698 | 418 | 13 | 23 | 714 | 18 | 667 | 5.89e-123 | 385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100010 | A0A072UFN2 | 98.617 | 723 | 9 | 1 | 1 | 723 | 1 | 722 | 0.0 | 1474 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0100000 | Msa0100010 | 0.899295 | 2.283520e-77 | -8.615850e-47 |
| Msa0100010 | Msa1239530 | 0.801019 | 1.096773e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100010 | MtrunA17_Chr7g0274541 | 98.617 | 723 | 9 | 1 | 1 | 723 | 1 | 722 | 0.0 | 1474 |
| Msa0100010 | MtrunA17_Chr6g0459461 | 82.301 | 113 | 18 | 1 | 1 | 111 | 91 | 203 | 2.08e-55 | 189 |
| Msa0100010 | MtrunA17_Chr6g0459471 | 93.651 | 63 | 4 | 0 | 653 | 715 | 1 | 63 | 4.07e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0100010 | AT2G34970.1 | 62.707 | 724 | 249 | 7 | 1 | 714 | 1 | 713 | 0.0 | 911 |
| Msa0100010 | AT4G18300.1 | 58.287 | 724 | 269 | 13 | 1 | 714 | 1 | 701 | 0.0 | 816 |
| Msa0100010 | AT3G02270.1 | 55.082 | 728 | 265 | 13 | 1 | 719 | 1 | 675 | 0.0 | 753 |
Find 184 sgRNAs with CRISPR-Local
Find 874 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGGCCTCCTTCACATTT+TGG | 0.127019 | 1_3:-6420195 | None:intergenic |
| GTACCAGATGTTATGAATTT+TGG | 0.128972 | 1_3:+6416602 | Msa0100010:CDS |
| GGCAGTATTCTTCCACCTTC+TGG | 0.135809 | 1_3:+6420312 | Msa0100010:CDS |
| CTTCGTGTTCTTGCCAATTT+TGG | 0.166436 | 1_3:-6417045 | None:intergenic |
| AAGATACTCACTTGAATTAA+TGG | 0.203717 | 1_3:-6423207 | None:intergenic |
| TATTACTGAAGATAAAATTT+TGG | 0.227298 | 1_3:+6420245 | Msa0100010:CDS |
| AGAAACTGCTTCTGAATTAT+TGG | 0.228648 | 1_3:+6419209 | Msa0100010:CDS |
| GCTTGTTCGTGTTCCGTTAC+AGG | 0.244182 | 1_3:+6410417 | Msa0100010:CDS |
| GAAGCAGGTGATTAACTATT+TGG | 0.248892 | 1_3:+6412347 | Msa0100010:CDS |
| ATAGGATCTGGCACCAAAAT+TGG | 0.250898 | 1_3:+6417032 | Msa0100010:CDS |
| CAGTGGCAGAAAACTGAATA+AGG | 0.256934 | 1_3:-6409678 | None:intergenic |
| GTTGGCCCGTTCTCTGTTAT+AGG | 0.261622 | 1_3:+6417014 | Msa0100010:CDS |
| ATAGTTGTTACAGTAAAATT+AGG | 0.269459 | 1_3:-6412393 | None:intergenic |
| AGTCAAAATTGTCTGTAAAT+AGG | 0.286591 | 1_3:-6415976 | None:intergenic |
| ATTTAGAGAAACACCAGTTT+TGG | 0.292797 | 1_3:+6423536 | Msa0100010:three_prime_UTR |
| TTATATTTCTTTCAGATAAT+GGG | 0.293378 | 1_3:+6416467 | Msa0100010:intron |
| TTCGTCTTCATCGTCTTCTT+CGG | 0.298425 | 1_3:-6423358 | None:intergenic |
| TGTACTTACCAAGTGGAAAA+AGG | 0.300815 | 1_3:+6422182 | Msa0100010:CDS |
| TACAAAAGTTGCTTGGTATT+AGG | 0.305309 | 1_3:-6415415 | None:intergenic |
| AGTAGAGATACTTGTGAATA+AGG | 0.319455 | 1_3:-6417713 | None:intergenic |
| AAAGCTCACCAGCTGAACTA+TGG | 0.322453 | 1_3:-6421383 | None:intergenic |
| ATAATAAAGCCTATTTCTAT+TGG | 0.322638 | 1_3:-6423616 | None:intergenic |
| AAAATTTGAAGAAATGTGTT+TGG | 0.336103 | 1_3:+6422498 | Msa0100010:CDS |
| GCAGTATTCTTCCACCTTCT+GGG | 0.337376 | 1_3:+6420313 | Msa0100010:CDS |
| TTGGTGGGGCTGGTTATGTT+TGG | 0.339452 | 1_3:+6420172 | Msa0100010:CDS |
| TCGTCTTCATCGTCTTCTTC+GGG | 0.349579 | 1_3:-6423357 | None:intergenic |
| TCCATAGTTAATATTCTAAT+AGG | 0.350196 | 1_3:+6409713 | Msa0100010:five_prime_UTR |
| AGAGAGAAGACAATTGAAAT+TGG | 0.350935 | 1_3:-6409517 | None:intergenic |
| ACCTATTAGAATATTAACTA+TGG | 0.358076 | 1_3:-6409714 | None:intergenic |
| TCATGTTTCCAGGTTGTAGT+TGG | 0.360879 | 1_3:+6417671 | Msa0100010:intron |
| TCATCGTCATCTGAATCATT+AGG | 0.362858 | 1_3:-6420351 | None:intergenic |
| ACATAGAGGGATGCTATATA+TGG | 0.363209 | 1_3:+6417117 | Msa0100010:CDS |
| TTGGTAAAGCATACAAAGAT+TGG | 0.376666 | 1_3:-6409498 | None:intergenic |
| AAGTTCACAGCCATCTTCTA+TGG | 0.377775 | 1_3:-6417150 | None:intergenic |
| CCGTTCTCTGTTATAGGATC+TGG | 0.381826 | 1_3:+6417020 | Msa0100010:CDS |
| GTCAATGTGTAATTTATCAT+TGG | 0.388585 | 1_3:-6412270 | None:intergenic |
| TAAAATACATGACCCAAAAC+TGG | 0.392182 | 1_3:-6423549 | None:intergenic |
| GTCGGAGTAGGATGCAAAAT+CGG | 0.392986 | 1_3:+6417083 | Msa0100010:CDS |
| GTAAATAGGCTAAGGACTTC+CGG | 0.402526 | 1_3:-6415962 | None:intergenic |
| TGTCGAGGTGCTGTCATCTT+GGG | 0.403227 | 1_3:+6423418 | Msa0100010:three_prime_UTR |
| AGTTGAATGGCAAAAGGGAT+TGG | 0.406087 | 1_3:-6423690 | None:intergenic |
| CCGGAACAAACCTCTGAAGC+AGG | 0.410804 | 1_3:-6419246 | None:intergenic |
| GAAAGCTATGGAAGATGAAC+TGG | 0.416799 | 1_3:+6420275 | Msa0100010:CDS |
| TCATCTGAATCATTAGGATT+AGG | 0.423207 | 1_3:-6420345 | None:intergenic |
| ATGGCTCATTTAAAGTTGAA+TGG | 0.431165 | 1_3:-6423703 | None:intergenic |
| ATTTAAAGTTGAATGGCAAA+AGG | 0.433487 | 1_3:-6423696 | None:intergenic |
| ATCAGTGTGTTCTATTCGAT+TGG | 0.438255 | 1_3:-6409617 | None:intergenic |
| CTGCTGTGCTCATGCGAAGC+AGG | 0.446859 | 1_3:+6412332 | Msa0100010:CDS |
| AACATGCGGTATCAGATTCA+TGG | 0.447610 | 1_3:-6409593 | None:intergenic |
| TTGTCGAGGTGCTGTCATCT+TGG | 0.447642 | 1_3:+6423417 | Msa0100010:three_prime_UTR |
| CATGTTTCCAGGTTGTAGTT+GGG | 0.449794 | 1_3:+6417672 | Msa0100010:intron |
| TTGCCAAAATTCATAACATC+TGG | 0.452105 | 1_3:-6416605 | None:intergenic |
| CAAGCACAATCAGCTGTTGT+TGG | 0.455052 | 1_3:+6416996 | Msa0100010:CDS |
| TCGTCGCTATCTTCCTCAAC+CGG | 0.456281 | 1_3:-6417743 | None:intergenic |
| CTCTCTGCACCATGACAAGC+AGG | 0.458401 | 1_3:+6415513 | Msa0100010:CDS |
| TCGGAGTAGGATGCAAAATC+GGG | 0.464129 | 1_3:+6417084 | Msa0100010:CDS |
| CTTGAATTAATGGTTGAGCT+TGG | 0.472089 | 1_3:-6423197 | None:intergenic |
| AATTGACTTCTAAAGTCAAA+TGG | 0.473008 | 1_3:-6420531 | None:intergenic |
| TAATGACCATGGTTATTAAA+CGG | 0.473067 | 1_3:+6415326 | Msa0100010:CDS |
| ATATTTATTACCAAGAAAAT+GGG | 0.473836 | 1_3:+6410349 | Msa0100010:intron |
| TTTCCAGGTTGTAGTTGGGC+AGG | 0.474402 | 1_3:+6417676 | Msa0100010:intron |
| AGCTACGAAGCTTGAAAGAC+AGG | 0.481340 | 1_3:+6416631 | Msa0100010:CDS |
| GCAAGGATATAATTCATAGA+TGG | 0.481776 | 1_3:+6416567 | Msa0100010:CDS |
| AAGCTCACCAGCTGAACTAT+GGG | 0.483922 | 1_3:-6421382 | None:intergenic |
| TTTAAAGTTGAATGGCAAAA+GGG | 0.489246 | 1_3:-6423695 | None:intergenic |
| TCTACTACAGCAGCCGGTTG+AGG | 0.489304 | 1_3:+6417730 | Msa0100010:CDS |
| TATGAAATCAGGATCTGCTC+TGG | 0.490344 | 1_3:+6417202 | Msa0100010:CDS |
| GACTTGCCCCATAGTTCAGC+TGG | 0.494761 | 1_3:+6421375 | Msa0100010:CDS |
| TTAAATTCCGTCGTCGGAGT+AGG | 0.496201 | 1_3:+6417071 | Msa0100010:CDS |
| TGAGAAGAAAGGCGCGGATG+AGG | 0.496216 | 1_3:+6423155 | Msa0100010:CDS |
| TTGTGAGTGAGGGAGGGTGA+TGG | 0.498785 | 1_3:-6409568 | None:intergenic |
| CATGGATTTGTGAGTGAGGG+AGG | 0.500198 | 1_3:-6409575 | None:intergenic |
| GATAAAGCAGACTTCTCAAA+AGG | 0.505881 | 1_3:+6415445 | Msa0100010:CDS |
| AAGATAGCTGCTGATTGTGC+TGG | 0.506462 | 1_3:+6421318 | Msa0100010:CDS |
| CAGGGAATATACCGTGGCTC+AGG | 0.508177 | 1_3:+6416650 | Msa0100010:CDS |
| TTGGGGCGTTCAAGAGTGAT+AGG | 0.508515 | 1_3:-6410478 | None:intergenic |
| ATGGAGTGCAGCAAGTATGA+TGG | 0.509520 | 1_3:-6409653 | None:intergenic |
| TTACAGTATCTCCACTGATA+AGG | 0.511096 | 1_3:-6415237 | None:intergenic |
| CTTATCCACTGTGCTGGTGA+TGG | 0.511806 | 1_3:-6419178 | None:intergenic |
| TCAGGATCTGCTCTGGAACC+TGG | 0.517246 | 1_3:+6417209 | Msa0100010:CDS |
| CTCGTAATACAAAAGTTGCT+TGG | 0.522774 | 1_3:-6415422 | None:intergenic |
| TCCGTTACAGGCGATTCTGT+TGG | 0.523711 | 1_3:+6410429 | Msa0100010:CDS |
| AGTGGCAGAAAACTGAATAA+GGG | 0.524775 | 1_3:-6409677 | None:intergenic |
| AAGAGATGACTTTGACAAAG+AGG | 0.524902 | 1_3:+6420386 | Msa0100010:CDS |
| TGGAGTGCAGCAAGTATGAT+GGG | 0.525818 | 1_3:-6409652 | None:intergenic |
| TTTGCATCCTACTCCGACGA+CGG | 0.525897 | 1_3:-6417078 | None:intergenic |
| TAGAAGATGGCTGTGAACTT+AGG | 0.527350 | 1_3:+6417153 | Msa0100010:CDS |
| AGTTGGGAAGATGAGAAGAA+AGG | 0.528430 | 1_3:+6423144 | Msa0100010:CDS |
| ATCTGACTTATCCACTGTGC+TGG | 0.528457 | 1_3:-6419184 | None:intergenic |
| CAGTATTCTTCCACCTTCTG+GGG | 0.529996 | 1_3:+6420314 | Msa0100010:CDS |
| CGGTACCAAGTCGAGACTGA+TGG | 0.534696 | 1_3:-6415369 | None:intergenic |
| AGTCGAGACTGATGGATAGC+TGG | 0.535756 | 1_3:-6415361 | None:intergenic |
| CAGATCCTATAACAGAGAAC+GGG | 0.536993 | 1_3:-6417019 | None:intergenic |
| TTTGGAGGCAGTGAAAGCTA+TGG | 0.537606 | 1_3:+6420263 | Msa0100010:CDS |
| CATAGAGGGATGCTATATAT+GGG | 0.540737 | 1_3:+6417118 | Msa0100010:CDS |
| CACCGAAGAAAAGCGCTGCT+AGG | 0.545842 | 1_3:+6410374 | Msa0100010:CDS |
| TCTGAATGATACGGACGAGC+AGG | 0.546245 | 1_3:+6422218 | Msa0100010:CDS |
| ATCATTGGAACATTCGCCAA+TGG | 0.549771 | 1_3:-6412255 | None:intergenic |
| AGAATCACACTTGAATTCAA+AGG | 0.549859 | 1_3:-6423473 | None:intergenic |
| AAGGAGGCCATGAGGAAGAG+TGG | 0.549988 | 1_3:+6420205 | Msa0100010:CDS |
| ACCGAAGAAAAGCGCTGCTA+GGG | 0.550483 | 1_3:+6410375 | Msa0100010:CDS |
| AATTGTCTGTAAATAGGCTA+AGG | 0.551876 | 1_3:-6415970 | None:intergenic |
| TCTCAAAATTGTGTCAGTGC+TGG | 0.552524 | 1_3:+6412420 | Msa0100010:CDS |
| TGCATCCTATCTGAATGATA+CGG | 0.553061 | 1_3:+6422209 | Msa0100010:CDS |
| AGGCATGCCATTGTATGTGA+GGG | 0.557311 | 1_3:+6417173 | Msa0100010:CDS |
| AATGCCTCCACTCTTCCTCA+TGG | 0.559030 | 1_3:-6420212 | None:intergenic |
| CAAAATGACGCCGAAGATGT+TGG | 0.560588 | 1_3:-6416000 | None:intergenic |
| GCTTGTCATGGTGCAGAGAG+AGG | 0.561389 | 1_3:-6415510 | None:intergenic |
| AATAGCCATGAAAATTTCAT+CGG | 0.561616 | 1_3:-6415389 | None:intergenic |
| TGTCATCTTGGGAGCTCAAG+AGG | 0.562299 | 1_3:+6423429 | Msa0100010:three_prime_UTR |
| GACAATGTCACCATAGAAGA+TGG | 0.562927 | 1_3:+6417140 | Msa0100010:CDS |
| TTACATTGACATCTGCTCGC+CGG | 0.564196 | 1_3:+6415943 | Msa0100010:CDS |
| ACTGCTTCTGAATTATTGGA+TGG | 0.564790 | 1_3:+6419213 | Msa0100010:CDS |
| CCAGATCCTATAACAGAGAA+CGG | 0.573457 | 1_3:-6417020 | None:intergenic |
| GGAGACTTTGTCCTTATCAG+TGG | 0.573784 | 1_3:+6415226 | Msa0100010:CDS |
| GGGGCTCAACCTGCTTGTCA+TGG | 0.573811 | 1_3:-6415522 | None:intergenic |
| TGAATCAGCTGGTGTAGAAG+AGG | 0.574781 | 1_3:+6412299 | Msa0100010:CDS |
| TTCATAACATCTGGTACCAG+TGG | 0.577449 | 1_3:-6416596 | None:intergenic |
| ATTCATGGATTTGTGAGTGA+GGG | 0.578256 | 1_3:-6409578 | None:intergenic |
| AAGAGTGATAGGTCTAAACT+TGG | 0.579985 | 1_3:-6410467 | None:intergenic |
| CAGAAAACTGAATAAGGGAA+TGG | 0.580607 | 1_3:-6409672 | None:intergenic |
| TGCTGACAGTGTCATAACTT+CGG | 0.582802 | 1_3:-6416547 | None:intergenic |
| AGTATCTCTACTACAGCAGC+CGG | 0.584040 | 1_3:+6417724 | Msa0100010:CDS |
| GTCATCTTGGGAGCTCAAGA+GGG | 0.584236 | 1_3:+6423430 | Msa0100010:three_prime_UTR |
| TCATAGATGGACATATCCAC+TGG | 0.588064 | 1_3:+6416580 | Msa0100010:CDS |
| CTTGTCATGGTGCAGAGAGA+GGG | 0.589004 | 1_3:-6415509 | None:intergenic |
| GCTATCCATCAGTCTCGACT+TGG | 0.593196 | 1_3:+6415364 | Msa0100010:CDS |
| GAACTGGAGTTAATTCATGA+TGG | 0.593221 | 1_3:+6420291 | Msa0100010:CDS |
| GATTCATGGATTTGTGAGTG+AGG | 0.594949 | 1_3:-6409579 | None:intergenic |
| GCCAACAGAATCGCCTGTAA+CGG | 0.595148 | 1_3:-6410430 | None:intergenic |
| ATACAAAGATTGGAAACATG+TGG | 0.595757 | 1_3:-6409488 | None:intergenic |
| TTGTCTGTAGTGGCTAAAAG+AGG | 0.596027 | 1_3:+6423332 | Msa0100010:intron |
| CTCGTCCGTATCATTCAGAT+AGG | 0.596542 | 1_3:-6422214 | None:intergenic |
| AGCACAGTGGATAAGTCAGA+TGG | 0.596852 | 1_3:+6419186 | Msa0100010:CDS |
| AAGCAACATGTCGCTTACTC+AGG | 0.597045 | 1_3:+6415258 | Msa0100010:CDS |
| TTCATGTTGTACTTACCAAG+TGG | 0.599094 | 1_3:+6422175 | Msa0100010:CDS |
| CGGAACAAACCTCTGAAGCA+GGG | 0.599221 | 1_3:-6419245 | None:intergenic |
| TAGGCATGCCATTGTATGTG+AGG | 0.601520 | 1_3:+6417172 | Msa0100010:CDS |
| GAAGAAAGGCGCGGATGAGG+CGG | 0.603471 | 1_3:+6423158 | Msa0100010:CDS |
| GGTAACAGCTCCCCAGAAGG+TGG | 0.603673 | 1_3:-6420324 | None:intergenic |
| AAGCGCTGCTAGGGTTTCAG+AGG | 0.606605 | 1_3:+6410384 | Msa0100010:CDS |
| TTGACATGGCTTGAATCAGC+TGG | 0.610800 | 1_3:+6412288 | Msa0100010:CDS |
| GTTTGCTCCATTGTTCACAA+AGG | 0.615724 | 1_3:+6422534 | Msa0100010:CDS |
| GGATTGGATTATCAAAGATG+TGG | 0.616116 | 1_3:-6423674 | None:intergenic |
| TGATAAATTACACATTGACA+TGG | 0.618999 | 1_3:+6412274 | Msa0100010:CDS |
| ATGGATTTGTGAGTGAGGGA+GGG | 0.620141 | 1_3:-6409574 | None:intergenic |
| TATTAGAATATTAACTATGG+AGG | 0.620362 | 1_3:-6409711 | None:intergenic |
| AAGTTATGACACTGTCAGCA+AGG | 0.620949 | 1_3:+6416550 | Msa0100010:CDS |
| AATGTGTTTGGAATCTGCGA+AGG | 0.621847 | 1_3:+6422510 | Msa0100010:CDS |
| CGGGTCAACTGTACACATAG+AGG | 0.622866 | 1_3:+6417103 | Msa0100010:CDS |
| GTTTGGCCAAAATGTGAAGG+AGG | 0.624679 | 1_3:+6420189 | Msa0100010:CDS |
| TTAAAAGACAGCACAACACC+AGG | 0.626342 | 1_3:-6417227 | None:intergenic |
| GGCATGCCATTGTATGTGAG+GGG | 0.631236 | 1_3:+6417174 | Msa0100010:CDS |
| TACAAAGATTGGAAACATGT+GGG | 0.632306 | 1_3:-6409487 | None:intergenic |
| TTAGGTAACAGCTCCCCAGA+AGG | 0.638298 | 1_3:-6420327 | None:intergenic |
| TCCGCGCAGATTATGCTGCA+AGG | 0.638328 | 1_3:+6416513 | Msa0100010:CDS |
| TATCACTCTTGAACGCCCCA+AGG | 0.638983 | 1_3:+6410480 | Msa0100010:CDS |
| GCTACGAAGCTTGAAAGACA+GGG | 0.639264 | 1_3:+6416632 | Msa0100010:CDS |
| TCATGGTGCAGAGAGAGGGA+AGG | 0.640432 | 1_3:-6415505 | None:intergenic |
| GAATATGCTGATAGTACTAG+TGG | 0.642214 | 1_3:+6417773 | Msa0100010:CDS |
| GAGGCCATGAGGAAGAGTGG+AGG | 0.645571 | 1_3:+6420208 | Msa0100010:CDS |
| GGGTCAACTGTACACATAGA+GGG | 0.650003 | 1_3:+6417104 | Msa0100010:CDS |
| TCTATTCGATTGGAAACATG+CGG | 0.650782 | 1_3:-6409607 | None:intergenic |
| AATAGAACACACTGATAACA+AGG | 0.651508 | 1_3:+6409624 | Msa0100010:five_prime_UTR |
| TAGTAATGCTGTAATGACCA+TGG | 0.655646 | 1_3:+6415315 | Msa0100010:CDS |
| GGACATCTATATATTTGTCG+AGG | 0.660131 | 1_3:+6423403 | Msa0100010:three_prime_UTR |
| GGAAGAGTGGAGGCATTCAG+TGG | 0.663488 | 1_3:+6420218 | Msa0100010:CDS |
| AGCTCACCAGCTGAACTATG+GGG | 0.666465 | 1_3:-6421381 | None:intergenic |
| TATGTTTGGCCAAAATGTGA+AGG | 0.666968 | 1_3:+6420186 | Msa0100010:CDS |
| TTTCATCCATACCTGAGCCA+CGG | 0.672449 | 1_3:-6416661 | None:intergenic |
| AGAGATACTTGTGAATAAGG+AGG | 0.676241 | 1_3:-6417710 | None:intergenic |
| GGAAGATGAGAAGAAAGGCG+CGG | 0.690784 | 1_3:+6423149 | Msa0100010:CDS |
| AATCCTAACTGAAAAGAACA+CGG | 0.696865 | 1_3:-6423511 | None:intergenic |
| TGCAGCCATCACCAGCACAG+TGG | 0.703317 | 1_3:+6419173 | Msa0100010:intron |
| TGTTATATACGAGCGCAACG+TGG | 0.708497 | 1_3:+6412455 | Msa0100010:CDS |
| GCATGCCATTGTATGTGAGG+GGG | 0.713162 | 1_3:+6417175 | Msa0100010:CDS |
| AAAATGTGAAGGAGGCCATG+AGG | 0.717990 | 1_3:+6420197 | Msa0100010:CDS |
| ACTATTTGGAGAAATCTGAG+TGG | 0.722937 | 1_3:+6412361 | Msa0100010:CDS |
| ATGGAGGTTGAAGAAAACAG+TGG | 0.725706 | 1_3:-6409695 | None:intergenic |
| TCCTTGCAGCATAATCTGCG+CGG | 0.727596 | 1_3:-6416514 | None:intergenic |
| GAAAGACAGGGAATATACCG+TGG | 0.729012 | 1_3:+6416644 | Msa0100010:CDS |
| GGAGTGCAGCAAGTATGATG+GGG | 0.760514 | 1_3:-6409651 | None:intergenic |
| GAACACGAACAAGCTCATCG+TGG | 0.778351 | 1_3:-6410408 | None:intergenic |
| ATTGCACTACATGTATAACG+AGG | 0.789338 | 1_3:+6423095 | Msa0100010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTGAAAATATAAAATAA+GGG | - | chr1_3:6409745-6409764 | None:intergenic | 10.0% |
| !! | AAGATTGAAAATATAAAATA+AGG | - | chr1_3:6409746-6409765 | None:intergenic | 10.0% |
| !!! | AATTTGTTTATTTCATTTAT+TGG | + | chr1_3:6409783-6409802 | Msa0100010:intron | 10.0% |
| !!! | ATTCGTTTTTTTTTTTTTTA+AGG | + | chr1_3:6409870-6409889 | Msa0100010:intron | 10.0% |
| !!! | TTTTTTTTTTTTAAGGAATT+TGG | + | chr1_3:6409877-6409896 | Msa0100010:intron | 10.0% |
| !!! | TTTTTTTTTTTAAGGAATTT+GGG | + | chr1_3:6409878-6409897 | Msa0100010:intron | 10.0% |
| !! | TATCAAATTATATAATGTAA+AGG | - | chr1_3:6410142-6410161 | None:intergenic | 10.0% |
| !! | TTCATAGATATATAAAAAAA+GGG | - | chr1_3:6410709-6410728 | None:intergenic | 10.0% |
| !!! | TTTTCTTTTCAAATTATTAT+CGG | - | chr1_3:6410776-6410795 | None:intergenic | 10.0% |
| !! | ATATAATTATGTATTTGAAA+TGG | + | chr1_3:6410859-6410878 | Msa0100010:intron | 10.0% |
| !!! | CATTAATACTTTAATATTTT+AGG | + | chr1_3:6412786-6412805 | Msa0100010:intron | 10.0% |
| !! | TTAAATAAGAAATGATTATA+CGG | - | chr1_3:6413049-6413068 | None:intergenic | 10.0% |
| !!! | ATTTTTAAATTGAGAATAAT+TGG | + | chr1_3:6413574-6413593 | Msa0100010:intron | 10.0% |
| !! | TAATTAAAAAAGTGATTATA+TGG | + | chr1_3:6413894-6413913 | Msa0100010:intron | 10.0% |
| !! | TTAGTAAGAATAAAAAAATT+TGG | + | chr1_3:6414649-6414668 | Msa0100010:intron | 10.0% |
| !!! | AGTAATTTGTTTTTATAATT+TGG | + | chr1_3:6415045-6415064 | Msa0100010:intron | 10.0% |
| !! | AAAAAAAAAAATGATTCAAA+AGG | - | chr1_3:6416152-6416171 | None:intergenic | 10.0% |
| !! | AATGTAATTCAATAATAATA+GGG | - | chr1_3:6417832-6417851 | None:intergenic | 10.0% |
| !! | TAATGTAATTCAATAATAAT+AGG | - | chr1_3:6417833-6417852 | None:intergenic | 10.0% |
| !!! | TGAATCTTTTATAAATATTT+TGG | + | chr1_3:6418062-6418081 | Msa0100010:intron | 10.0% |
| !! | TTTATCATTTAAAAAAAGAA+TGG | + | chr1_3:6418836-6418855 | Msa0100010:intron | 10.0% |
| !! | TTATCATTTAAAAAAAGAAT+GGG | + | chr1_3:6418837-6418856 | Msa0100010:intron | 10.0% |
| !!! | TTTTAAATTTAATAAAGTTG+AGG | + | chr1_3:6418961-6418980 | Msa0100010:intron | 10.0% |
| !!! | ATTTAATTTACATTTAACAT+TGG | + | chr1_3:6419409-6419428 | Msa0100010:intron | 10.0% |
| !! | TTCTTTAATATATTTAGATA+GGG | - | chr1_3:6421098-6421117 | None:intergenic | 10.0% |
| !! | ATAATATAAATTAATCTCAA+AGG | - | chr1_3:6422114-6422133 | None:intergenic | 10.0% |
| !! | GAAAGAAAAAAAAAAAAAAA+AGG | + | chr1_3:6423593-6423612 | Msa0100010:three_prime_UTR | 10.0% |
| !! | ATTGAAAATATAAAATAAGG+GGG | - | chr1_3:6409743-6409762 | None:intergenic | 15.0% |
| !! | GATTGAAAATATAAAATAAG+GGG | - | chr1_3:6409744-6409763 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTAAGGAATTTG+GGG | + | chr1_3:6409879-6409898 | Msa0100010:intron | 15.0% |
| !!! | CTTATCTTATTTTTTAGTTT+AGG | + | chr1_3:6410287-6410306 | Msa0100010:intron | 15.0% |
| !! | TATATTTATTACCAAGAAAA+TGG | + | chr1_3:6410348-6410367 | Msa0100010:intron | 15.0% |
| !! | ATATTTATTACCAAGAAAAT+GGG | + | chr1_3:6410349-6410368 | Msa0100010:intron | 15.0% |
| !!! | ATTTATGAATTCATTGTTTT+TGG | + | chr1_3:6410612-6410631 | Msa0100010:intron | 15.0% |
| !! | TGTGATATATATATATACAT+CGG | + | chr1_3:6410650-6410669 | Msa0100010:intron | 15.0% |
| !! | CTTCATAGATATATAAAAAA+AGG | - | chr1_3:6410710-6410729 | None:intergenic | 15.0% |
| !! | AGATTTAGAAATTAATAAGT+TGG | + | chr1_3:6411634-6411653 | Msa0100010:intron | 15.0% |
| !!! | TTTACTTTTGATATAGAAAT+AGG | + | chr1_3:6411981-6412000 | Msa0100010:intron | 15.0% |
| !!! | TTTACTTTTGATATAGAAAT+AGG | + | chr1_3:6411981-6412000 | Msa0100010:intron | 15.0% |
| !! | CTTAAATTAACAAACAAATA+CGG | - | chr1_3:6412123-6412142 | None:intergenic | 15.0% |
| !!! | TTTATTTGTTTCTTGATTTA+AGG | + | chr1_3:6412224-6412243 | Msa0100010:intron | 15.0% |
| !!! | TTTGGTTTTTTTTATTTTTC+TGG | - | chr1_3:6413310-6413329 | None:intergenic | 15.0% |
| !! | ATTTGAAAGAAATTATCAAA+AGG | + | chr1_3:6413415-6413434 | Msa0100010:intron | 15.0% |
| !! | TTATGATTGTATACATAAAT+CGG | + | chr1_3:6413512-6413531 | Msa0100010:intron | 15.0% |
| !!! | AAAAATATTAATTGGGATTT+TGG | + | chr1_3:6413538-6413557 | Msa0100010:intron | 15.0% |
| !!! | AAAATATTAATTGGGATTTT+GGG | + | chr1_3:6413539-6413558 | Msa0100010:intron | 15.0% |
| !! | ATATAGAAAAAGATTATATG+AGG | + | chr1_3:6413806-6413825 | Msa0100010:intron | 15.0% |
| !! | TATAGAAAAAGATTATATGA+GGG | + | chr1_3:6413807-6413826 | Msa0100010:intron | 15.0% |
| !!! | TTTTTGTAATAAACAGATTT+TGG | + | chr1_3:6414874-6414893 | Msa0100010:intron | 15.0% |
| !!! | AATAAATCATTGATTCATTT+GGG | - | chr1_3:6415781-6415800 | None:intergenic | 15.0% |
| !!! | TAATAAATCATTGATTCATT+TGG | - | chr1_3:6415782-6415801 | None:intergenic | 15.0% |
| !! | TTATATTTCTTTCAGATAAT+GGG | + | chr1_3:6416467-6416486 | Msa0100010:intron | 15.0% |
| !! | TGTAACATTAAATGATAAAA+TGG | + | chr1_3:6416719-6416738 | Msa0100010:intron | 15.0% |
| !! | ATACTAAACACAAAAATTAA+AGG | - | chr1_3:6417411-6417430 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTCTCATTAGA+TGG | + | chr1_3:6417585-6417604 | Msa0100010:intron | 15.0% |
| !!! | TTTTTTTTTTCTCATTAGAT+GGG | + | chr1_3:6417586-6417605 | Msa0100010:intron | 15.0% |
| !!! | TTAAAAGCTTTATGAAAATT+CGG | - | chr1_3:6417804-6417823 | None:intergenic | 15.0% |
| !!! | CTTTTATAAATATTTTGGAT+TGG | + | chr1_3:6418067-6418086 | Msa0100010:intron | 15.0% |
| !! | GTTTATAATAACAAAATACA+TGG | - | chr1_3:6418881-6418900 | None:intergenic | 15.0% |
| !!! | ATCAAGTAATGTATTTTTTT+AGG | - | chr1_3:6419024-6419043 | None:intergenic | 15.0% |
| !! | GTAAATTAAATTCTACAATT+TGG | - | chr1_3:6419400-6419419 | None:intergenic | 15.0% |
| !!! | TTTTTTGATTGAAATCTATT+TGG | + | chr1_3:6419465-6419484 | Msa0100010:intron | 15.0% |
| !! | TGAAAGAAAAAAAAAAAACA+GGG | - | chr1_3:6419705-6419724 | None:intergenic | 15.0% |
| !! | ATGAAAGAAAAAAAAAAAAC+AGG | - | chr1_3:6419706-6419725 | None:intergenic | 15.0% |
| !!! | AGATTGAAGTTTTTTTTTTT+TGG | + | chr1_3:6419737-6419756 | Msa0100010:intron | 15.0% |
| !!! | TGATAGAATTTTCATTTTAA+AGG | + | chr1_3:6420102-6420121 | Msa0100010:intron | 15.0% |
| !!! | GATAGAATTTTCATTTTAAA+GGG | + | chr1_3:6420103-6420122 | Msa0100010:intron | 15.0% |
| !!! | AAAATTTTATCTTCAGTAAT+AGG | - | chr1_3:6420246-6420265 | None:intergenic | 15.0% |
| !!! | TATTACTGAAGATAAAATTT+TGG | + | chr1_3:6420245-6420264 | Msa0100010:CDS | 15.0% |
| !! | TTATCATGTTATTATTAGTT+CGG | - | chr1_3:6420787-6420806 | None:intergenic | 15.0% |
| !! | GTTCTTTAATATATTTAGAT+AGG | - | chr1_3:6421099-6421118 | None:intergenic | 15.0% |
| !!! | ATTCATAACTATTATTTTTC+TGG | + | chr1_3:6421164-6421183 | Msa0100010:intron | 15.0% |
| !! | GTTTCTCTTTATATTTAATT+AGG | - | chr1_3:6421663-6421682 | None:intergenic | 15.0% |
| !! | AAACTAAAAAATAATGCAAT+TGG | - | chr1_3:6422319-6422338 | None:intergenic | 15.0% |
| !!! | CATTATTTTTTAGTTTAATC+TGG | + | chr1_3:6422323-6422342 | Msa0100010:intron | 15.0% |
| !!! | TTTTTTTTCTTTCTCATTTA+AGG | - | chr1_3:6423586-6423605 | None:intergenic | 15.0% |
| !! | TATTAGAATATTAACTATGG+AGG | - | chr1_3:6409714-6409733 | None:intergenic | 20.0% |
| !! | TCCATAGTTAATATTCTAAT+AGG | + | chr1_3:6409713-6409732 | Msa0100010:five_prime_UTR | 20.0% |
| !! | ACCTATTAGAATATTAACTA+TGG | - | chr1_3:6409717-6409736 | None:intergenic | 20.0% |
| !!! | TGATCACAAAATTTTAATTG+TGG | + | chr1_3:6409932-6409951 | Msa0100010:intron | 20.0% |
| !! | GTTTCAAATTTATATATACG+TGG | + | chr1_3:6410080-6410099 | Msa0100010:intron | 20.0% |
| !!! | ATGAGTTTTATTCTTGATTA+AGG | + | chr1_3:6410182-6410201 | Msa0100010:intron | 20.0% |
| !!! | CTTATTTTTTAGTTTAGGTT+TGG | + | chr1_3:6410292-6410311 | Msa0100010:intron | 20.0% |
| !! | AAAAAATAGAAATTACCTTG+GGG | - | chr1_3:6410498-6410517 | None:intergenic | 20.0% |
| !! | CAAAAAATAGAAATTACCTT+GGG | - | chr1_3:6410499-6410518 | None:intergenic | 20.0% |
| !! | ACAAAAAATAGAAATTACCT+TGG | - | chr1_3:6410500-6410519 | None:intergenic | 20.0% |
| !!! | ATGCGTTTATTCATTATTTT+TGG | + | chr1_3:6410585-6410604 | Msa0100010:intron | 20.0% |
| !! | AAATTATAAGAGAACCTATT+AGG | + | chr1_3:6411609-6411628 | Msa0100010:intron | 20.0% |
| !!! | CGTATTTGTTTGTTAATTTA+AGG | + | chr1_3:6412121-6412140 | Msa0100010:intron | 20.0% |
| !! | ATAGTTGTTACAGTAAAATT+AGG | - | chr1_3:6412396-6412415 | None:intergenic | 20.0% |
| !!! | AGAGAAAATTTTGAAAATCA+AGG | + | chr1_3:6412713-6412732 | Msa0100010:intron | 20.0% |
| !!! | AAATTTTGAAAATCAAGGAA+TGG | + | chr1_3:6412718-6412737 | Msa0100010:intron | 20.0% |
| !! | TAATTAAATAATTACACACG+TGG | - | chr1_3:6413934-6413953 | None:intergenic | 20.0% |
| !! | ATTTGAATCAAATATGTTTC+AGG | - | chr1_3:6413367-6413386 | None:intergenic | 20.0% |
| !!! | AAATATTAATTGGGATTTTG+GGG | + | chr1_3:6413540-6413559 | Msa0100010:intron | 20.0% |
| !! | TAATTAAATAATTACACACG+TGG | + | chr1_3:6413934-6413953 | Msa0100010:intron | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | - | chr1_3:6414034-6414053 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | + | chr1_3:6414034-6414053 | Msa0100010:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | + | chr1_3:6414035-6414054 | Msa0100010:intron | 20.0% |
| !! | TAATAAAAACTGTATTCTGT+TGG | - | chr1_3:6414319-6414338 | None:intergenic | 20.0% |
| !! | TTATGATCAATCAAAATGAA+TGG | + | chr1_3:6414336-6414355 | Msa0100010:intron | 20.0% |
| !! | TATTAAAGATGTATCTTATC+TGG | + | chr1_3:6414557-6414576 | Msa0100010:intron | 20.0% |
| !! | AAAAAAATTTGGATACTTTC+TGG | + | chr1_3:6414660-6414679 | Msa0100010:intron | 20.0% |
| !! | AAAAAATTTGGATACTTTCT+GGG | + | chr1_3:6414661-6414680 | Msa0100010:intron | 20.0% |
| !!! | TTTTCTATTTTGAAGATACA+AGG | + | chr1_3:6415205-6415224 | Msa0100010:intron | 20.0% |
| !!! | ATTATTAATGCTACTTTGTT+TGG | + | chr1_3:6415847-6415866 | Msa0100010:intron | 20.0% |
| !! | CATTATCTGAAAGAAATATA+AGG | - | chr1_3:6416468-6416487 | None:intergenic | 20.0% |
| !! | CTTATATTTCTTTCAGATAA+TGG | + | chr1_3:6416466-6416485 | Msa0100010:intron | 20.0% |
| !! | AACTTCATACATTCAATTAA+TGG | - | chr1_3:6416941-6416960 | None:intergenic | 20.0% |
| !! | AATATATTAACCATTAGTAG+TGG | + | chr1_3:6417445-6417464 | Msa0100010:intron | 20.0% |
| !! | TGAATTACATTATTAGCAAT+TGG | + | chr1_3:6417841-6417860 | Msa0100010:intron | 20.0% |
| !! | CAAACAGTTAGAATAATTAT+TGG | + | chr1_3:6418212-6418231 | Msa0100010:intron | 20.0% |
| !! | TAGAATAATTATTGGAATCA+AGG | + | chr1_3:6418220-6418239 | Msa0100010:intron | 20.0% |
| !! | AGAATAATTATTGGAATCAA+GGG | + | chr1_3:6418221-6418240 | Msa0100010:intron | 20.0% |
| !! | AATTTCAGTTATTAAACAGA+GGG | + | chr1_3:6418246-6418265 | Msa0100010:intron | 20.0% |
| !! | TTTGCAAGAAAAAAATCTTT+AGG | - | chr1_3:6418484-6418503 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCTTGCAAAGAAT+TGG | + | chr1_3:6418488-6418507 | Msa0100010:intron | 20.0% |
| !! | TTTAAAAAAAGAATGGGAAT+TGG | + | chr1_3:6418843-6418862 | Msa0100010:intron | 20.0% |
| !! | TCAAACTTGATAAATGAAAA+TGG | - | chr1_3:6418903-6418922 | None:intergenic | 20.0% |
| !! | CTGGTATTTGATAAAAATTT+AGG | + | chr1_3:6418997-6419016 | Msa0100010:intron | 20.0% |
| !!! | TATTTTCTTTATACTATGTG+TGG | + | chr1_3:6419079-6419098 | Msa0100010:intron | 20.0% |
| !!! | TATGTTTTTTGTATGTAGAT+AGG | + | chr1_3:6419109-6419128 | Msa0100010:intron | 20.0% |
| !!! | ACATAAATTAAGAAGTTTTC+CGG | - | chr1_3:6419268-6419287 | None:intergenic | 20.0% |
| !!! | TACATCTCTAAAATGTTATT+TGG | - | chr1_3:6419358-6419377 | None:intergenic | 20.0% |
| !!! | TTGAAGTTTTTTTTTTTTGG+TGG | + | chr1_3:6419740-6419759 | Msa0100010:intron | 20.0% |
| !! | TAGTGTATAAACAATATATC+TGG | + | chr1_3:6419943-6419962 | Msa0100010:intron | 20.0% |
| !! | TTTGACATATAAACTTACAT+CGG | + | chr1_3:6420416-6420435 | Msa0100010:intron | 20.0% |
| !!! | TGAAAACAACTTACTTTTAA+AGG | - | chr1_3:6420701-6420720 | None:intergenic | 20.0% |
| !! | TAATAATAACATGATAAAGC+TGG | + | chr1_3:6420790-6420809 | Msa0100010:intron | 20.0% |
| !! | GAAAGTTAATATGTATCTAT+AGG | - | chr1_3:6420897-6420916 | None:intergenic | 20.0% |
| !!! | GAAACATTTTTATTTGTGTT+AGG | + | chr1_3:6421283-6421302 | Msa0100010:intron | 20.0% |
| !! | TATGCCTGATAAAAAATAAA+CGG | - | chr1_3:6421447-6421466 | None:intergenic | 20.0% |
| !! | TGTTACTAAATATATCTGAT+AGG | - | chr1_3:6421537-6421556 | None:intergenic | 20.0% |
| !!! | ATATGGTTTTACTGAAATTT+TGG | + | chr1_3:6421927-6421946 | Msa0100010:intron | 20.0% |
| !! | TTAATTTATATTATTGCCTC+TGG | + | chr1_3:6422120-6422139 | Msa0100010:intron | 20.0% |
| !! | TAATTTATATTATTGCCTCT+GGG | + | chr1_3:6422121-6422140 | Msa0100010:intron | 20.0% |
| !! | AAAATTTGAAGAAATGTGTT+TGG | + | chr1_3:6422498-6422517 | Msa0100010:CDS | 20.0% |
| !!! | AAGGTATTTTTATCTTTTAC+TGG | + | chr1_3:6422553-6422572 | Msa0100010:intron | 20.0% |
| !!! | ATTTTTATCTTTTACTGGTT+AGG | + | chr1_3:6422558-6422577 | Msa0100010:intron | 20.0% |
| !!! | ATGAATTTTAACACAATTGA+AGG | + | chr1_3:6422841-6422860 | Msa0100010:intron | 20.0% |
| !! | TACAATACTTGTAAAATGAT+TGG | + | chr1_3:6422995-6423014 | Msa0100010:intron | 20.0% |
| !!! | ATAATAAAGCCTATTTCTAT+TGG | - | chr1_3:6423619-6423638 | None:intergenic | 20.0% |
| !! | TAGAAGAAAAAGAAAGATTA+AGG | + | chr1_3:6423639-6423658 | Msa0100010:three_prime_UTR | 20.0% |
| !!! | GGTCTTGAATTTTTGTTTAA+TGG | + | chr1_3:6409804-6409823 | Msa0100010:intron | 25.0% |
| !!! | CTTGAATTTTTGTTTAATGG+TGG | + | chr1_3:6409807-6409826 | Msa0100010:intron | 25.0% |
| !!! | AGGGTTTGTTAGTATTTATT+TGG | + | chr1_3:6409843-6409862 | Msa0100010:intron | 25.0% |
| !!! | GGGTTTGTTAGTATTTATTT+GGG | + | chr1_3:6409844-6409863 | Msa0100010:intron | 25.0% |
| ! | TATGCAATAAAGTTGTAGTT+TGG | + | chr1_3:6410242-6410261 | Msa0100010:intron | 25.0% |
| ! | TTCATTGTAATCATACGTTT+CGG | + | chr1_3:6410804-6410823 | Msa0100010:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1_3:6411123-6411142 | Msa0100010:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | - | chr1_3:6411258-6411277 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1_3:6411265-6411284 | Msa0100010:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATA+TGG | - | chr1_3:6411300-6411319 | None:intergenic | 25.0% |
| ! | TAGAAAAGGTAGTTGAAAAT+AGG | + | chr1_3:6411522-6411541 | Msa0100010:intron | 25.0% |
| !! | GGTTCTCTTATAATTTTTCT+CGG | - | chr1_3:6411605-6411624 | None:intergenic | 25.0% |
| ! | ATTTCTAAATCTCTCCTAAT+AGG | - | chr1_3:6411626-6411645 | None:intergenic | 25.0% |
| !! | TAATAAGTTGGACTGAAATA+TGG | + | chr1_3:6411646-6411665 | Msa0100010:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr1_3:6411666-6411685 | Msa0100010:intron | 25.0% |
| ! | ATTAACAACAACAACAAAGA+AGG | - | chr1_3:6411734-6411753 | None:intergenic | 25.0% |
| ! | AACATTCATATATAAGAACG+TGG | + | chr1_3:6411788-6411807 | Msa0100010:intron | 25.0% |
| !! | GTAATGACATAAATTTTGTG+AGG | + | chr1_3:6411831-6411850 | Msa0100010:intron | 25.0% |
| ! | AGAAATAGGTTATACATAAG+CGG | + | chr1_3:6411995-6412014 | Msa0100010:intron | 25.0% |
| ! | AGAAATAGGTTATACATAAG+CGG | + | chr1_3:6411995-6412014 | Msa0100010:intron | 25.0% |
| ! | ATAAGCTGTTTATCTAAACT+AGG | + | chr1_3:6412097-6412116 | Msa0100010:intron | 25.0% |
| ! | GTCAATGTGTAATTTATCAT+TGG | - | chr1_3:6412273-6412292 | None:intergenic | 25.0% |
| ! | TGATAAATTACACATTGACA+TGG | + | chr1_3:6412274-6412293 | Msa0100010:CDS | 25.0% |
| ! | CTATTGTAAATATGCTACAT+TGG | + | chr1_3:6412533-6412552 | Msa0100010:intron | 25.0% |
| !!! | TGCAAGTTTTTGAAAGTTAA+GGG | - | chr1_3:6414067-6414086 | None:intergenic | 25.0% |
| !!! | TTGCAAGTTTTTGAAAGTTA+AGG | - | chr1_3:6414066-6414085 | None:intergenic | 25.0% |
| !! | CTTTCAAAAACTTGCAATTT+TGG | + | chr1_3:6412834-6412853 | Msa0100010:intron | 25.0% |
| ! | GAAATGATTATACGGTTATA+TGG | - | chr1_3:6413041-6413060 | None:intergenic | 25.0% |
| ! | GCAATAATTTGGAGATTTAT+GGG | - | chr1_3:6413142-6413161 | None:intergenic | 25.0% |
| ! | AAGAGATATTGGCAATAATT+TGG | - | chr1_3:6413153-6413172 | None:intergenic | 25.0% |
| ! | GGAAGAAATTGTTAATGATT+GGG | - | chr1_3:6413195-6413214 | None:intergenic | 25.0% |
| ! | TGGAAGAAATTGTTAATGAT+TGG | - | chr1_3:6413196-6413215 | None:intergenic | 25.0% |
| ! | TGATAAAGCAAACAAAAATG+AGG | - | chr1_3:6413219-6413238 | None:intergenic | 25.0% |
| ! | AAGATGAATATAGTTTAGCT+TGG | - | chr1_3:6413267-6413286 | None:intergenic | 25.0% |
| !! | CACTATTTTCTTCTAACATT+TGG | - | chr1_3:6413328-6413347 | None:intergenic | 25.0% |
| ! | TAGAAGAAAATAGTGAAAAG+AGG | + | chr1_3:6413333-6413352 | Msa0100010:intron | 25.0% |
| ! | ATCGGTGGAAAAATATTAAT+TGG | + | chr1_3:6413530-6413549 | Msa0100010:intron | 25.0% |
| ! | TCGGTGGAAAAATATTAATT+GGG | + | chr1_3:6413531-6413550 | Msa0100010:intron | 25.0% |
| !!! | AATAATTGGTTTTCTAGACA+TGG | + | chr1_3:6413588-6413607 | Msa0100010:intron | 25.0% |
| !!! | TTTCTTTCTTTTTTTTCCTC+TGG | + | chr1_3:6413654-6413673 | Msa0100010:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | + | chr1_3:6414036-6414055 | Msa0100010:intron | 25.0% |
| !! | CTTTCAAAAACTTGCAATTT+TGG | - | chr1_3:6412834-6412853 | None:intergenic | 25.0% |
| !!! | TTGCAAGTTTTTGAAAGTTA+AGG | + | chr1_3:6414066-6414085 | Msa0100010:intron | 25.0% |
| !!! | TGCAAGTTTTTGAAAGTTAA+GGG | + | chr1_3:6414067-6414086 | Msa0100010:intron | 25.0% |
| !! | TATTTCTACTATGAATGTGT+TGG | + | chr1_3:6414206-6414225 | Msa0100010:intron | 25.0% |
| !!! | AAATTTGATTTTTTACCCAG+CGG | - | chr1_3:6414234-6414253 | None:intergenic | 25.0% |
| !! | AAAATTCTCTAGAAGGAATA+GGG | - | chr1_3:6414469-6414488 | None:intergenic | 25.0% |
| ! | TACATATTGTAGGTACATAT+CGG | + | chr1_3:6414684-6414703 | Msa0100010:intron | 25.0% |
| !! | GGAAACAATACTTTCATTTT+TGG | + | chr1_3:6414734-6414753 | Msa0100010:intron | 25.0% |
| !!! | ACTTTCATTTTTGGAGTATT+TGG | + | chr1_3:6414743-6414762 | Msa0100010:intron | 25.0% |
| !!! | CTTTCATTTTTGGAGTATTT+GGG | + | chr1_3:6414744-6414763 | Msa0100010:intron | 25.0% |
| ! | AAATTACTATGACACATGTA+AGG | - | chr1_3:6415033-6415052 | None:intergenic | 25.0% |
| !!! | CACTTTTAGAACATAAAGAA+AGG | + | chr1_3:6415281-6415300 | Msa0100010:CDS | 25.0% |
| ! | TAATGACCATGGTTATTAAA+CGG | + | chr1_3:6415326-6415345 | Msa0100010:CDS | 25.0% |
| ! | AATAGCCATGAAAATTTCAT+CGG | - | chr1_3:6415392-6415411 | None:intergenic | 25.0% |
| ! | ACTCGTAAACGAATTATTAT+CGG | + | chr1_3:6415615-6415634 | Msa0100010:intron | 25.0% |
| !!! | ACATCACAGGTATTTTTTTT+AGG | - | chr1_3:6415704-6415723 | None:intergenic | 25.0% |
| ! | AGTCAAAATTGTCTGTAAAT+AGG | - | chr1_3:6415979-6415998 | None:intergenic | 25.0% |
| !! | AGCTTATCCTTTTTAATAGA+TGG | + | chr1_3:6416115-6416134 | Msa0100010:intron | 25.0% |
| !!! | GCTTTTTCCATCTATTAAAA+AGG | - | chr1_3:6416125-6416144 | None:intergenic | 25.0% |
| ! | TTAAATGTTCTCAACAAACA+GGG | - | chr1_3:6416239-6416258 | None:intergenic | 25.0% |
| ! | TTTAAATGTTCTCAACAAAC+AGG | - | chr1_3:6416240-6416259 | None:intergenic | 25.0% |
| ! | AAACATAAATGATGAGCTTT+AGG | - | chr1_3:6416380-6416399 | None:intergenic | 25.0% |
| !! | GTTTCCAATATATTCTTTTG+TGG | + | chr1_3:6416396-6416415 | Msa0100010:intron | 25.0% |
| ! | AATATAAGGTAATGTTGATG+AGG | - | chr1_3:6416454-6416473 | None:intergenic | 25.0% |
| ! | ATAAAATGGCAAGCTTATAT+TGG | + | chr1_3:6416733-6416752 | Msa0100010:intron | 25.0% |
| ! | ATTAATGGAAACAACACAAT+AGG | - | chr1_3:6416926-6416945 | None:intergenic | 25.0% |
| ! | AAAATTATGACCACTACTAA+TGG | - | chr1_3:6417458-6417477 | None:intergenic | 25.0% |
| ! | TAATATAAAAAGAGATACCG+AGG | + | chr1_3:6418030-6418049 | Msa0100010:intron | 25.0% |
| ! | GAATTTCAGTTATTAAACAG+AGG | + | chr1_3:6418245-6418264 | Msa0100010:intron | 25.0% |
| ! | GTAACTCTGTATTATTTAAC+TGG | - | chr1_3:6418433-6418452 | None:intergenic | 25.0% |
| ! | AGAGTTACCTTCAAATTTAT+GGG | + | chr1_3:6418445-6418464 | Msa0100010:intron | 25.0% |
| !! | GCATTAGTATTTAAGTGTTT+TGG | + | chr1_3:6418517-6418536 | Msa0100010:intron | 25.0% |
| ! | TGTAATTGTTTAGCTAATTC+TGG | + | chr1_3:6418561-6418580 | Msa0100010:intron | 25.0% |
| !! | GAAACATTTTCTAACTTTGT+TGG | + | chr1_3:6418622-6418641 | Msa0100010:intron | 25.0% |
| ! | TTTCAAAATCCAATTTAGAG+AGG | + | chr1_3:6418678-6418697 | Msa0100010:intron | 25.0% |
| ! | TAAATTTACTTGCAACTCAA+TGG | - | chr1_3:6419061-6419080 | None:intergenic | 25.0% |
| !!! | TTTTAGAGATGTAAGTTTTC+TGG | + | chr1_3:6419365-6419384 | Msa0100010:intron | 25.0% |
| !!! | AAGTTTTTTTTTTTTGGTGG+TGG | + | chr1_3:6419743-6419762 | Msa0100010:intron | 25.0% |
| !! | CAAAGTATCAGTAAATTACT+AGG | - | chr1_3:6419986-6420005 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTTTTAATCAGCT+AGG | + | chr1_3:6420147-6420166 | Msa0100010:intron | 25.0% |
| !!! | TTTTTTAATCAGCTAGGTTT+TGG | + | chr1_3:6420153-6420172 | Msa0100010:intron | 25.0% |
| !! | TACTGAAGATAAAATTTTGG+AGG | + | chr1_3:6420248-6420267 | Msa0100010:CDS | 25.0% |
| !! | TTTAATATTCTGTCATTTGC+AGG | + | chr1_3:6420462-6420481 | Msa0100010:intron | 25.0% |
| !!! | AATTGACTTCTAAAGTCAAA+TGG | - | chr1_3:6420534-6420553 | None:intergenic | 25.0% |
| ! | TTTAACATCCAAAATACAGA+GGG | - | chr1_3:6420657-6420676 | None:intergenic | 25.0% |
| !!! | GTTCTGTTTCTTTTTTTGAA+GGG | - | chr1_3:6420976-6420995 | None:intergenic | 25.0% |
| !!! | TGTTCTGTTTCTTTTTTTGA+AGG | - | chr1_3:6420977-6420996 | None:intergenic | 25.0% |
| ! | ATTAAAAAGACTCTAACAAC+AGG | - | chr1_3:6421419-6421438 | None:intergenic | 25.0% |
| !!! | TTTCCCGTTTATTTTTTATC+AGG | + | chr1_3:6421440-6421459 | Msa0100010:intron | 25.0% |
| ! | ATGCCTGATAAAAAATAAAC+GGG | - | chr1_3:6421446-6421465 | None:intergenic | 25.0% |
| !! | TTTTTATCAGGCATAGAATA+TGG | + | chr1_3:6421452-6421471 | Msa0100010:intron | 25.0% |
| ! | TAGAAGATACTGAAATTGAA+AGG | + | chr1_3:6421625-6421644 | Msa0100010:intron | 25.0% |
| ! | AGAAGATACTGAAATTGAAA+GGG | + | chr1_3:6421626-6421645 | Msa0100010:intron | 25.0% |
| ! | TTTCCAACATGTATATATGT+TGG | + | chr1_3:6422035-6422054 | Msa0100010:intron | 25.0% |
| !!! | TAGTTATATTTTGAACTCTC+AGG | + | chr1_3:6422063-6422082 | Msa0100010:intron | 25.0% |
| !!! | AGTTATATTTTGAACTCTCA+GGG | + | chr1_3:6422064-6422083 | Msa0100010:intron | 25.0% |
| ! | AAATCACAATAAAAGAAGAG+TGG | - | chr1_3:6422367-6422386 | None:intergenic | 25.0% |
| ! | ATCATCCAATGTTCATTATA+AGG | + | chr1_3:6422399-6422418 | Msa0100010:intron | 25.0% |
| ! | AAAAATACCTTTGTGAACAA+TGG | - | chr1_3:6422544-6422563 | None:intergenic | 25.0% |
| !! | TGTTATAGTTTTTCTTTCTG+AGG | - | chr1_3:6422725-6422744 | None:intergenic | 25.0% |
| ! | CAGAAAGAAAAACTATAACA+TGG | + | chr1_3:6422725-6422744 | Msa0100010:intron | 25.0% |
| ! | TATATAGACAGCATGAAAAT+GGG | - | chr1_3:6422977-6422996 | None:intergenic | 25.0% |
| ! | AAGATACTCACTTGAATTAA+TGG | - | chr1_3:6423210-6423229 | None:intergenic | 25.0% |
| ! | TTATTTATTCTTGTCTGTAG+TGG | + | chr1_3:6423322-6423341 | Msa0100010:intron | 25.0% |
| ! | AAAAAAAGGCCAATAGAAAT+AGG | + | chr1_3:6423607-6423626 | Msa0100010:three_prime_UTR | 25.0% |
| !! | TTTAAAGTTGAATGGCAAAA+GGG | - | chr1_3:6423698-6423717 | None:intergenic | 25.0% |
| !! | ATTTAAAGTTGAATGGCAAA+AGG | - | chr1_3:6423699-6423718 | None:intergenic | 25.0% |
| TTGGTAAAGCATACAAAGAT+TGG | - | chr1_3:6409501-6409520 | None:intergenic | 30.0% | |
| AGAGAGAAGACAATTGAAAT+TGG | - | chr1_3:6409520-6409539 | None:intergenic | 30.0% | |
| AATAGAACACACTGATAACA+AGG | + | chr1_3:6409624-6409643 | Msa0100010:five_prime_UTR | 30.0% | |
| ATACTAACAAACCCTAACAA+TGG | - | chr1_3:6409838-6409857 | None:intergenic | 30.0% | |
| ATATAATGTAAAGGCAGTGA+CGG | - | chr1_3:6410133-6410152 | None:intergenic | 30.0% | |
| ATTCTTGATTAAGGATGTGT+TGG | + | chr1_3:6410191-6410210 | Msa0100010:intron | 30.0% | |
| TATATAAAAAAAGGGCAACC+CGG | - | chr1_3:6410701-6410720 | None:intergenic | 30.0% | |
| CATTGACATTGATATGACAT+TGG | + | chr1_3:6410743-6410762 | Msa0100010:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1_3:6411119-6411138 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | - | chr1_3:6411189-6411208 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr1_3:6411190-6411209 | Msa0100010:intron | 30.0% | |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | - | chr1_3:6411248-6411267 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1_3:6411270-6411289 | None:intergenic | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr1_3:6411304-6411323 | Msa0100010:intron | 30.0% |
| TGCGATGATAAATTTCACAT+TGG | + | chr1_3:6411411-6411430 | Msa0100010:intron | 30.0% | |
| ! | GGTTAATTTGAACATTTGTG+TGG | + | chr1_3:6411432-6411451 | Msa0100010:intron | 30.0% |
| AGTACCAACTATAGTAGAAA+AGG | + | chr1_3:6411508-6411527 | Msa0100010:intron | 30.0% | |
| ! | ACTACCTTTTCTACTATAGT+TGG | - | chr1_3:6411515-6411534 | None:intergenic | 30.0% |
| ! | ATAAATTTTGTGAGGCTGTA+TGG | + | chr1_3:6411839-6411858 | Msa0100010:intron | 30.0% |
| ! | ACTGTTTTCATAAGCTATCA+TGG | - | chr1_3:6411930-6411949 | None:intergenic | 30.0% |
| TTGAAGTCTGTATTGAACAA+TGG | + | chr1_3:6412598-6412617 | Msa0100010:intron | 30.0% | |
| CTGGATACATAGTATGATAT+GGG | + | chr1_3:6412662-6412681 | Msa0100010:intron | 30.0% | |
| AGTATGATATGGGTACAATA+TGG | + | chr1_3:6412672-6412691 | Msa0100010:intron | 30.0% | |
| !! | TACAATATGGCACTGATTTA+AGG | + | chr1_3:6412685-6412704 | Msa0100010:intron | 30.0% |
| !! | AAGTTTTTGAAAGTTAAGGG+GGG | - | chr1_3:6414070-6414089 | None:intergenic | 30.0% |
| !! | CAAGTTTTTGAAAGTTAAGG+GGG | - | chr1_3:6414069-6414088 | None:intergenic | 30.0% |
| !! | GCAAGTTTTTGAAAGTTAAG+GGG | - | chr1_3:6414068-6414087 | None:intergenic | 30.0% |
| ATAATTTGGAGATTTATGGG+TGG | - | chr1_3:6413139-6413158 | None:intergenic | 30.0% | |
| GGCAATAATTTGGAGATTTA+TGG | - | chr1_3:6413143-6413162 | None:intergenic | 30.0% | |
| GTTATGTTGAGAAGAGATAT+TGG | - | chr1_3:6413164-6413183 | None:intergenic | 30.0% | |
| TAAAGCAAACAAAAATGAGG+TGG | - | chr1_3:6413216-6413235 | None:intergenic | 30.0% | |
| TGATTCAAATTCGACAGTAA+TGG | + | chr1_3:6413377-6413396 | Msa0100010:intron | 30.0% | |
| CAATCATAAATCATGTCATC+TGG | - | chr1_3:6413501-6413520 | None:intergenic | 30.0% | |
| TGATTGTATACATAAATCGG+TGG | + | chr1_3:6413515-6413534 | Msa0100010:intron | 30.0% | |
| ! | GTTGAAAATGATGATGATGA+TGG | + | chr1_3:6413617-6413636 | Msa0100010:intron | 30.0% |
| CATTCATCAAATAAATCCAG+AGG | - | chr1_3:6413673-6413692 | None:intergenic | 30.0% | |
| TTATGAAGATGAAGAAGATG+AGG | + | chr1_3:6413694-6413713 | Msa0100010:intron | 30.0% | |
| TATGAAGATGAAGAAGATGA+GGG | + | chr1_3:6413695-6413714 | Msa0100010:intron | 30.0% | |
| ! | TCCTTTTTGCCAATTTTGAA+CGG | - | chr1_3:6413979-6413998 | None:intergenic | 30.0% |
| AAAAAGGACCAAATTTGCAA+TGG | + | chr1_3:6413991-6414010 | Msa0100010:intron | 30.0% | |
| AAAAGGACCAAATTTGCAAT+GGG | + | chr1_3:6413992-6414011 | Msa0100010:intron | 30.0% | |
| ! | TTGTAGTTTTCATACTTAGG+GGG | + | chr1_3:6414037-6414056 | Msa0100010:intron | 30.0% |
| !! | GCAAGTTTTTGAAAGTTAAG+GGG | + | chr1_3:6414068-6414087 | Msa0100010:intron | 30.0% |
| !! | CAAGTTTTTGAAAGTTAAGG+GGG | + | chr1_3:6414069-6414088 | Msa0100010:intron | 30.0% |
| !! | AAGTTTTTGAAAGTTAAGGG+GGG | + | chr1_3:6414070-6414089 | Msa0100010:intron | 30.0% |
| AATTGTGATCATCCAACAAT+AGG | + | chr1_3:6414145-6414164 | Msa0100010:intron | 30.0% | |
| AACTGTATTCTGTTGGAAAA+GGG | - | chr1_3:6414312-6414331 | None:intergenic | 30.0% | |
| AAACTGTATTCTGTTGGAAA+AGG | - | chr1_3:6414313-6414332 | None:intergenic | 30.0% | |
| ! | CAAAATTCTCTAGAAGGAAT+AGG | - | chr1_3:6414470-6414489 | None:intergenic | 30.0% |
| !! | CTATTCCTTCTAGAGAATTT+TGG | + | chr1_3:6414468-6414487 | Msa0100010:intron | 30.0% |
| AGATTCCAAAATTCTCTAGA+AGG | - | chr1_3:6414476-6414495 | None:intergenic | 30.0% | |
| !!! | TAGAGAATTTTGGAATCTCT+TGG | + | chr1_3:6414478-6414497 | Msa0100010:intron | 30.0% |
| ! | TTTTTGTGACACATTCTGTT+AGG | - | chr1_3:6414506-6414525 | None:intergenic | 30.0% |
| AAAGATGTATCTTATCTGGA+TGG | + | chr1_3:6414561-6414580 | Msa0100010:intron | 30.0% | |
| CATGCATTTAATACCGATAT+GGG | - | chr1_3:6414711-6414730 | None:intergenic | 30.0% | |
| ACATGCATTTAATACCGATA+TGG | - | chr1_3:6414712-6414731 | None:intergenic | 30.0% | |
| ATCGGTATTAAATGCATGTT+AGG | + | chr1_3:6414713-6414732 | Msa0100010:intron | 30.0% | |
| CTAATGAAACAAACAACAAG+AGG | - | chr1_3:6414928-6414947 | None:intergenic | 30.0% | |
| TTATGTATGCTCTGTTCTAT+TGG | + | chr1_3:6414977-6414996 | Msa0100010:intron | 30.0% | |
| !! | CTGTTCTATTGGTTCTTTAA+AGG | + | chr1_3:6414988-6415007 | Msa0100010:intron | 30.0% |
| ! | ATTGGTTCTTTAAAGGAACA+AGG | + | chr1_3:6414995-6415014 | Msa0100010:intron | 30.0% |
| ! | GTTTTGTGTAGTAACACTAT+TGG | + | chr1_3:6415178-6415197 | Msa0100010:intron | 30.0% |
| ! | TTTTGACCGTTTAATAACCA+TGG | - | chr1_3:6415335-6415354 | None:intergenic | 30.0% |
| TACAAAAGTTGCTTGGTATT+AGG | - | chr1_3:6415418-6415437 | None:intergenic | 30.0% | |
| AGCAGAAAGATAGGAAAAAA+GGG | - | chr1_3:6415545-6415564 | None:intergenic | 30.0% | |
| AAGCAGAAAGATAGGAAAAA+AGG | - | chr1_3:6415546-6415565 | None:intergenic | 30.0% | |
| ACTTCACACTAAAGAGTAAT+TGG | + | chr1_3:6415579-6415598 | Msa0100010:intron | 30.0% | |
| GAAATGACAATAAACATCAC+AGG | - | chr1_3:6415717-6415736 | None:intergenic | 30.0% | |
| AATTGTCTGTAAATAGGCTA+AGG | - | chr1_3:6415973-6415992 | None:intergenic | 30.0% | |
| !!! | ATTTTGACTACCAACATCTT+CGG | + | chr1_3:6415990-6416009 | Msa0100010:CDS | 30.0% |
| ! | AAAGGATAAGCTGATTCAAA+AGG | - | chr1_3:6416107-6416126 | None:intergenic | 30.0% |
| TCTACTTGTTTATCTCTTAC+AGG | + | chr1_3:6416189-6416208 | Msa0100010:intron | 30.0% | |
| TGAAACACTTCAACAGTTTA+TGG | + | chr1_3:6416302-6416321 | Msa0100010:intron | 30.0% | |
| AGTGCCACAAAAGAATATAT+TGG | - | chr1_3:6416403-6416422 | None:intergenic | 30.0% | |
| GCAAGGATATAATTCATAGA+TGG | + | chr1_3:6416567-6416586 | Msa0100010:CDS | 30.0% | |
| ! | GTACCAGATGTTATGAATTT+TGG | + | chr1_3:6416602-6416621 | Msa0100010:CDS | 30.0% |
| TTGCCAAAATTCATAACATC+TGG | - | chr1_3:6416608-6416627 | None:intergenic | 30.0% | |
| !! | ATGAAAGTTTCGGTGTTAAT+TGG | + | chr1_3:6416678-6416697 | Msa0100010:intron | 30.0% |
| !! | TGAAAGTTTCGGTGTTAATT+GGG | + | chr1_3:6416679-6416698 | Msa0100010:intron | 30.0% |
| ! | AAGATTTTAAATTCCGTCGT+CGG | + | chr1_3:6417065-6417084 | Msa0100010:CDS | 30.0% |
| CAAACATATGAGAAACATGA+AGG | - | chr1_3:6417286-6417305 | None:intergenic | 30.0% | |
| CTTCATGTTTCTCATATGTT+TGG | + | chr1_3:6417284-6417303 | Msa0100010:intron | 30.0% | |
| CAAACATCTTACATACACTT+AGG | - | chr1_3:6417537-6417556 | None:intergenic | 30.0% | |
| TCTTCGTAAGATGGAAATAT+AGG | + | chr1_3:6417634-6417653 | Msa0100010:intron | 30.0% | |
| CTTCGTAAGATGGAAATATA+GGG | + | chr1_3:6417635-6417654 | Msa0100010:intron | 30.0% | |
| AGTAGAGATACTTGTGAATA+AGG | - | chr1_3:6417716-6417735 | None:intergenic | 30.0% | |
| TTCCTTAGAACTGAATGAAT+TGG | + | chr1_3:6417925-6417944 | Msa0100010:intron | 30.0% | |
| ! | TTGAGCTTGATTAGATGTTT+TGG | + | chr1_3:6417975-6417994 | Msa0100010:intron | 30.0% |
| CAGAGTTACCTTCAAATTTA+TGG | + | chr1_3:6418444-6418463 | Msa0100010:intron | 30.0% | |
| GATAGAACCCATAAATTTGA+AGG | - | chr1_3:6418455-6418474 | None:intergenic | 30.0% | |
| !! | TTTTGAAAACCATACAAGAG+AGG | - | chr1_3:6418666-6418685 | None:intergenic | 30.0% |
| ! | TTTTGAATGAACGGAATGAA+CGG | + | chr1_3:6418719-6418738 | Msa0100010:intron | 30.0% |
| AAATGTTTATGCACTTATCG+AGG | - | chr1_3:6418808-6418827 | None:intergenic | 30.0% | |
| AAAAAAAGAATGGGAATTGG+AGG | + | chr1_3:6418846-6418865 | Msa0100010:intron | 30.0% | |
| TCAAATACCAGTTACAGTTA+AGG | - | chr1_3:6418988-6419007 | None:intergenic | 30.0% | |
| AGAAACTGCTTCTGAATTAT+TGG | + | chr1_3:6419209-6419228 | Msa0100010:CDS | 30.0% | |
| AACAGTTACTTAGTATCTTC+AGG | - | chr1_3:6419504-6419523 | None:intergenic | 30.0% | |
| TGTTAGAACTGTGTTCTATT+CGG | + | chr1_3:6419526-6419545 | Msa0100010:intron | 30.0% | |
| ! | TTTTCTTCATTGATGTGAGA+GGG | + | chr1_3:6419555-6419574 | Msa0100010:intron | 30.0% |
| TTAAACTAACAGATCTACAC+AGG | + | chr1_3:6419605-6419624 | Msa0100010:intron | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr1_3:6419788-6419807 | None:intergenic | 30.0% | |
| TATATTGCGAATGAGTTTGT+CGG | - | chr1_3:6419892-6419911 | None:intergenic | 30.0% | |
| !!! | TCTGATTTTTCAAGTATCGT+TGG | + | chr1_3:6419920-6419939 | Msa0100010:intron | 30.0% |
| GTATCAGTAAATTACTAGGT+TGG | - | chr1_3:6419982-6420001 | None:intergenic | 30.0% | |
| TTCTTAGTGAACAATTCATC+TGG | + | chr1_3:6420009-6420028 | Msa0100010:intron | 30.0% | |
| TCATCTGAATCATTAGGATT+AGG | - | chr1_3:6420348-6420367 | None:intergenic | 30.0% | |
| ATGTGTGTTCGATATATATC+TGG | + | chr1_3:6420628-6420647 | Msa0100010:intron | 30.0% | |
| GTTTAACATCCAAAATACAG+AGG | - | chr1_3:6420658-6420677 | None:intergenic | 30.0% | |
| GACAGTTATTATAAGTCTGT+TGG | - | chr1_3:6420828-6420847 | None:intergenic | 30.0% | |
| AGATACAAACAACAGAACTA+TGG | + | chr1_3:6420929-6420948 | Msa0100010:intron | 30.0% | |
| TTCTAGACAAAATTGAACAC+TGG | - | chr1_3:6421121-6421140 | None:intergenic | 30.0% | |
| ACAAATTATGCAGAATGTTC+AGG | + | chr1_3:6421554-6421573 | Msa0100010:intron | 30.0% | |
| ! | TTCAGGTTACATGAATTAAC+TGG | + | chr1_3:6421571-6421590 | Msa0100010:intron | 30.0% |
| TCAGGTTACATGAATTAACT+GGG | + | chr1_3:6421572-6421591 | Msa0100010:intron | 30.0% | |
| GAAGATACTGAAATTGAAAG+GGG | + | chr1_3:6421627-6421646 | Msa0100010:intron | 30.0% | |
| GTTAAGTTATACTCTGATAG+TGG | - | chr1_3:6421685-6421704 | None:intergenic | 30.0% | |
| ATCACTTACAGAATGCAAAA+AGG | + | chr1_3:6421784-6421803 | Msa0100010:intron | 30.0% | |
| TTGGTTTATGACAAGTACAT+TGG | + | chr1_3:6421946-6421965 | Msa0100010:intron | 30.0% | |
| ACATGTTGGAAAGTAAGATT+GGG | - | chr1_3:6422027-6422046 | None:intergenic | 30.0% | |
| TACATGTTGGAAAGTAAGAT+TGG | - | chr1_3:6422028-6422047 | None:intergenic | 30.0% | |
| TGACCAACATATATACATGT+TGG | - | chr1_3:6422041-6422060 | None:intergenic | 30.0% | |
| !! | GTTATATTTTGAACTCTCAG+GGG | + | chr1_3:6422065-6422084 | Msa0100010:intron | 30.0% |
| ATCTGAAAAATTAATCCCAG+AGG | - | chr1_3:6422139-6422158 | None:intergenic | 30.0% | |
| !! | TCTGGGATTAATTTTTCAGA+TGG | + | chr1_3:6422138-6422157 | Msa0100010:intron | 30.0% |
| !! | GATTAATTTTTCAGATGGCT+TGG | + | chr1_3:6422143-6422162 | Msa0100010:intron | 30.0% |
| ! | ACAAGCCTTATAATGAACAT+TGG | - | chr1_3:6422407-6422426 | None:intergenic | 30.0% |
| !!! | ATTTTAGAATCACTTCGATC+TGG | - | chr1_3:6422483-6422502 | None:intergenic | 30.0% |
| TCACAACATTATTAACTCAC+TGG | - | chr1_3:6422820-6422839 | None:intergenic | 30.0% | |
| GTATATAGACAGCATGAAAA+TGG | - | chr1_3:6422978-6422997 | None:intergenic | 30.0% | |
| TTCATATTCTCACACTACAT+TGG | + | chr1_3:6423028-6423047 | Msa0100010:intron | 30.0% | |
| !!! | AAGAAGATGCTATTTTGAGT+TGG | + | chr1_3:6423127-6423146 | Msa0100010:CDS | 30.0% |
| !!! | AGAAGATGCTATTTTGAGTT+GGG | + | chr1_3:6423128-6423147 | Msa0100010:CDS | 30.0% |
| AAGAAAGTAATGCATCTCAT+GGG | - | chr1_3:6423291-6423310 | None:intergenic | 30.0% | |
| TAAGAAAGTAATGCATCTCA+TGG | - | chr1_3:6423292-6423311 | None:intergenic | 30.0% | |
| !!! | CGAAGAGTAGAAATTTTTTG+AGG | + | chr1_3:6423377-6423396 | Msa0100010:exon | 30.0% |
| !!! | AGTAGAAATTTTTTGAGGCT+AGG | + | chr1_3:6423382-6423401 | Msa0100010:exon | 30.0% |
| AGAATCACACTTGAATTCAA+AGG | - | chr1_3:6423476-6423495 | None:intergenic | 30.0% | |
| AATCCTAACTGAAAAGAACA+CGG | - | chr1_3:6423514-6423533 | None:intergenic | 30.0% | |
| ! | ATTTAGAGAAACACCAGTTT+TGG | + | chr1_3:6423536-6423555 | Msa0100010:three_prime_UTR | 30.0% |
| ! | TTTAGAGAAACACCAGTTTT+GGG | + | chr1_3:6423537-6423556 | Msa0100010:three_prime_UTR | 30.0% |
| TAAAATACATGACCCAAAAC+TGG | - | chr1_3:6423552-6423571 | None:intergenic | 30.0% | |
| ! | ATGGCTCATTTAAAGTTGAA+TGG | - | chr1_3:6423706-6423725 | None:intergenic | 30.0% |
| ATTCATGGATTTGTGAGTGA+GGG | - | chr1_3:6409581-6409600 | None:intergenic | 35.0% | |
| TCTATTCGATTGGAAACATG+CGG | - | chr1_3:6409610-6409629 | None:intergenic | 35.0% | |
| ATCAGTGTGTTCTATTCGAT+TGG | - | chr1_3:6409620-6409639 | None:intergenic | 35.0% | |
| CAGAAAACTGAATAAGGGAA+TGG | - | chr1_3:6409675-6409694 | None:intergenic | 35.0% | |
| AGTGGCAGAAAACTGAATAA+GGG | - | chr1_3:6409680-6409699 | None:intergenic | 35.0% | |
| ! | ATGGTGGAAATTCCATTGTT+AGG | + | chr1_3:6409823-6409842 | Msa0100010:intron | 35.0% |
| TGGTGGAAATTCCATTGTTA+GGG | + | chr1_3:6409824-6409843 | Msa0100010:intron | 35.0% | |
| !! | TGATTTCTAGCACTAAGCAA+TGG | + | chr1_3:6409965-6409984 | Msa0100010:intron | 35.0% |
| !! | ATCCAGGAATTTTGGAAAGT+GGG | - | chr1_3:6410110-6410129 | None:intergenic | 35.0% |
| AAGAGTGATAGGTCTAAACT+TGG | - | chr1_3:6410470-6410489 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1_3:6411112-6411131 | Msa0100010:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr1_3:6411132-6411151 | Msa0100010:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr1_3:6411137-6411156 | Msa0100010:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1_3:6411193-6411212 | Msa0100010:intron | 35.0% | |
| ATTTGTGTGGTAAGACTAGA+TGG | + | chr1_3:6411445-6411464 | Msa0100010:intron | 35.0% | |
| TTTGTGTGGTAAGACTAGAT+GGG | + | chr1_3:6411446-6411465 | Msa0100010:intron | 35.0% | |
| CAATATTAGAGAGAGAGAGT+TGG | + | chr1_3:6411485-6411504 | Msa0100010:intron | 35.0% | |
| AGGTAGTTGAAAATAGGCAT+AGG | + | chr1_3:6411528-6411547 | Msa0100010:intron | 35.0% | |
| TAGTTGAAAATAGGCATAGG+TGG | + | chr1_3:6411531-6411550 | Msa0100010:intron | 35.0% | |
| AAAATAGGCATAGGTGGTTT+GGG | + | chr1_3:6411537-6411556 | Msa0100010:intron | 35.0% | |
| !! | ATTTAAGGTGCTTTTGCCAT+TGG | + | chr1_3:6412136-6412155 | Msa0100010:intron | 35.0% |
| ! | ATAATCGAAGCATTCACCAA+TGG | - | chr1_3:6412155-6412174 | None:intergenic | 35.0% |
| !! | ATTTAAGGTGCTTTTGCCAT+TGG | + | chr1_3:6412136-6412155 | Msa0100010:intron | 35.0% |
| GAAGCAGGTGATTAACTATT+TGG | + | chr1_3:6412347-6412366 | Msa0100010:CDS | 35.0% | |
| ACTATTTGGAGAAATCTGAG+TGG | + | chr1_3:6412361-6412380 | Msa0100010:CDS | 35.0% | |
| AACAATGGTTGTTGTGTTCT+TGG | + | chr1_3:6412613-6412632 | Msa0100010:intron | 35.0% | |
| GTTGTGTTCTTGGTTAGAAT+TGG | + | chr1_3:6412623-6412642 | Msa0100010:intron | 35.0% | |
| ! | TGGTTTTCAGTTAAGAAACC+TGG | + | chr1_3:6412643-6412662 | Msa0100010:intron | 35.0% |
| CCATATCATACTATGTATCC+AGG | - | chr1_3:6412664-6412683 | None:intergenic | 35.0% | |
| CCTGGATACATAGTATGATA+TGG | + | chr1_3:6412661-6412680 | Msa0100010:intron | 35.0% | |
| ! | TTTTAGCCCCATTGCAAATT+TGG | + | chr1_3:6412866-6412885 | Msa0100010:intron | 35.0% |
| AAAAGGGCCAAATTTGCAAT+GGG | - | chr1_3:6412876-6412895 | None:intergenic | 35.0% | |
| AAAAAGGGCCAAATTTGCAA+TGG | - | chr1_3:6412877-6412896 | None:intergenic | 35.0% | |
| TTCAAATTCGACAGTAATGG+TGG | + | chr1_3:6413380-6413399 | Msa0100010:intron | 35.0% | |
| !! | GAAAATGATGATGATGATGG+AGG | + | chr1_3:6413620-6413639 | Msa0100010:intron | 35.0% |
| ACCGTTCAAAATTGGCAAAA+AGG | + | chr1_3:6413975-6413994 | Msa0100010:intron | 35.0% | |
| AAAGGACCAAATTTGCAATG+GGG | + | chr1_3:6413993-6414012 | Msa0100010:intron | 35.0% | |
| ! | TTTTAGCCCCATTGCAAATT+TGG | - | chr1_3:6412866-6412885 | None:intergenic | 35.0% |
| AGAATCAAAGAAACACATGC+AGG | + | chr1_3:6414263-6414282 | Msa0100010:intron | 35.0% | |
| GAATCAAAGAAACACATGCA+GGG | + | chr1_3:6414264-6414283 | Msa0100010:intron | 35.0% | |
| AAATGAATGGATCCCAAACA+TGG | + | chr1_3:6414349-6414368 | Msa0100010:intron | 35.0% | |
| AATGAATGGATCCCAAACAT+GGG | + | chr1_3:6414350-6414369 | Msa0100010:intron | 35.0% | |
| TTAGTAGTTAGTAGCAGCAA+GGG | - | chr1_3:6414396-6414415 | None:intergenic | 35.0% | |
| ATTAGTAGTTAGTAGCAGCA+AGG | - | chr1_3:6414397-6414416 | None:intergenic | 35.0% | |
| TAACTGCTGCATAAACTTAG+TGG | + | chr1_3:6414442-6414461 | Msa0100010:intron | 35.0% | |
| ACTTTCTGGGTACATATTGT+AGG | + | chr1_3:6414674-6414693 | Msa0100010:intron | 35.0% | |
| !!! | CTTCCAAGCTTTTTAAGATG+AGG | + | chr1_3:6414767-6414786 | Msa0100010:intron | 35.0% |
| ACACCTCATCTTAAAAAGCT+TGG | - | chr1_3:6414773-6414792 | None:intergenic | 35.0% | |
| ATAACCTTATCTAGACTAGG+AGG | - | chr1_3:6414823-6414842 | None:intergenic | 35.0% | |
| TCCTAGTCTAGATAAGGTTA+TGG | + | chr1_3:6414822-6414841 | Msa0100010:intron | 35.0% | |
| TTACAGTATCTCCACTGATA+AGG | - | chr1_3:6415240-6415259 | None:intergenic | 35.0% | |
| TAGTAATGCTGTAATGACCA+TGG | + | chr1_3:6415315-6415334 | Msa0100010:CDS | 35.0% | |
| !!! | TGGTACCGATGAAATTTTCA+TGG | + | chr1_3:6415384-6415403 | Msa0100010:CDS | 35.0% |
| CTCGTAATACAAAAGTTGCT+TGG | - | chr1_3:6415425-6415444 | None:intergenic | 35.0% | |
| ! | CAAGCAACTTTTGTATTACG+AGG | + | chr1_3:6415423-6415442 | Msa0100010:CDS | 35.0% |
| GATAAAGCAGACTTCTCAAA+AGG | + | chr1_3:6415445-6415464 | Msa0100010:CDS | 35.0% | |
| GCAGAAAGATAGGAAAAAAG+GGG | - | chr1_3:6415544-6415563 | None:intergenic | 35.0% | |
| TGAAAGCAAAGCAGAAAGAT+AGG | - | chr1_3:6415554-6415573 | None:intergenic | 35.0% | |
| TATCTTTCTGCTTTGCTTTC+AGG | + | chr1_3:6415553-6415572 | Msa0100010:intron | 35.0% | |
| GAAAACATCACAGTTATTCG+TGG | - | chr1_3:6415680-6415699 | None:intergenic | 35.0% | |
| ! | TGTCATTTCAACCTCATGAT+TGG | + | chr1_3:6415728-6415747 | Msa0100010:intron | 35.0% |
| GTCATTTCAACCTCATGATT+GGG | + | chr1_3:6415729-6415748 | Msa0100010:intron | 35.0% | |
| AGAAAGTTTCATAGCTTCTC+AGG | - | chr1_3:6415885-6415904 | None:intergenic | 35.0% | |
| AGAAGCTATGAAACTTTCTG+AGG | + | chr1_3:6415886-6415905 | Msa0100010:intron | 35.0% | |
| ! | GTGAATGATTTCTTTTCTGC+AGG | + | chr1_3:6415916-6415935 | Msa0100010:intron | 35.0% |
| ATTCATGACAGTTCAACATG+TGG | - | chr1_3:6416061-6416080 | None:intergenic | 35.0% | |
| AACAGTTTATGGACTTGCAT+TGG | + | chr1_3:6416313-6416332 | Msa0100010:intron | 35.0% | |
| TCAGGTATGGATGAAAGTTT+CGG | + | chr1_3:6416668-6416687 | Msa0100010:intron | 35.0% | |
| CAAACAGGCAAACATATAAC+TGG | - | chr1_3:6416768-6416787 | None:intergenic | 35.0% | |
| ACAGCATGAATTAAGCAAAC+AGG | - | chr1_3:6416783-6416802 | None:intergenic | 35.0% | |
| TGCTTGCGAAATATCTGATA+GGG | - | chr1_3:6416982-6417001 | None:intergenic | 35.0% | |
| ACATAGAGGGATGCTATATA+TGG | + | chr1_3:6417117-6417136 | Msa0100010:CDS | 35.0% | |
| CATAGAGGGATGCTATATAT+GGG | + | chr1_3:6417118-6417137 | Msa0100010:CDS | 35.0% | |
| ! | AACATGAAGGATGGAAGTAT+GGG | - | chr1_3:6417273-6417292 | None:intergenic | 35.0% |
| AAACATGAAGGATGGAAGTA+TGG | - | chr1_3:6417274-6417293 | None:intergenic | 35.0% | |
| CATATGAGAAACATGAAGGA+TGG | - | chr1_3:6417282-6417301 | None:intergenic | 35.0% | |
| TCCAGTTATTCTTCGTAAGA+TGG | + | chr1_3:6417625-6417644 | Msa0100010:intron | 35.0% | |
| TCCATCTTACGAAGAATAAC+TGG | - | chr1_3:6417629-6417648 | None:intergenic | 35.0% | |
| TAGTTGTCTTTCATGTTTCC+AGG | + | chr1_3:6417661-6417680 | Msa0100010:intron | 35.0% | |
| AGAGATACTTGTGAATAAGG+AGG | - | chr1_3:6417713-6417732 | None:intergenic | 35.0% | |
| GAATATGCTGATAGTACTAG+TGG | + | chr1_3:6417773-6417792 | Msa0100010:CDS | 35.0% | |
| CTAGCATATGAAATATTGCC+TGG | + | chr1_3:6417880-6417899 | Msa0100010:intron | 35.0% | |
| CACCAATTCATTCAGTTCTA+AGG | - | chr1_3:6417930-6417949 | None:intergenic | 35.0% | |
| CTTAGAACTGAATGAATTGG+TGG | + | chr1_3:6417928-6417947 | Msa0100010:intron | 35.0% | |
| AACACATGTACAGGAATTCA+GGG | - | chr1_3:6418122-6418141 | None:intergenic | 35.0% | |
| GATGAAAACAGAAAACTGAG+AGG | - | chr1_3:6418382-6418401 | None:intergenic | 35.0% | |
| TCTATACAGCCTCTCTAAAT+TGG | - | chr1_3:6418690-6418709 | None:intergenic | 35.0% | |
| ! | TTCGAGTCCTTTTGAATGAA+CGG | + | chr1_3:6418710-6418729 | Msa0100010:intron | 35.0% |
| GTTCATTCCGTTCATTCAAA+AGG | - | chr1_3:6418720-6418739 | None:intergenic | 35.0% | |
| CACAGAAAAACTAGAGAAAG+AGG | - | chr1_3:6418769-6418788 | None:intergenic | 35.0% | |
| !!! | CTCTTTCTCTAGTTTTTCTG+TGG | + | chr1_3:6418767-6418786 | Msa0100010:intron | 35.0% |
| ATTTACTTGCAACTCAATGG+AGG | - | chr1_3:6419058-6419077 | None:intergenic | 35.0% | |
| CTTTATACTATGTGTGGATG+TGG | + | chr1_3:6419085-6419104 | Msa0100010:intron | 35.0% | |
| GATGGCTGCATAAATGAAAA+TGG | - | chr1_3:6419163-6419182 | None:intergenic | 35.0% | |
| ACTGCTTCTGAATTATTGGA+TGG | + | chr1_3:6419213-6419232 | Msa0100010:CDS | 35.0% | |
| ACAGCAGTAAAGCTAAACAA+TGG | - | chr1_3:6419297-6419316 | None:intergenic | 35.0% | |
| ! | GTTTTCTTCATTGATGTGAG+AGG | + | chr1_3:6419554-6419573 | Msa0100010:intron | 35.0% |
| GTTGAATTACAACAAGCACA+GGG | - | chr1_3:6419658-6419677 | None:intergenic | 35.0% | |
| AGTTGAATTACAACAAGCAC+AGG | - | chr1_3:6419659-6419678 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr1_3:6419783-6419802 | None:intergenic | 35.0% | |
| ATCCACTACAATCATTTGCA+TGG | - | chr1_3:6420036-6420055 | None:intergenic | 35.0% | |
| !! | TTTAATCAGCTAGGTTTTGG+TGG | + | chr1_3:6420156-6420175 | Msa0100010:intron | 35.0% |
| !! | TTAATCAGCTAGGTTTTGGT+GGG | + | chr1_3:6420157-6420176 | Msa0100010:intron | 35.0% |
| TATGTTTGGCCAAAATGTGA+AGG | + | chr1_3:6420186-6420205 | Msa0100010:CDS | 35.0% | |
| GAACTGGAGTTAATTCATGA+TGG | + | chr1_3:6420291-6420310 | Msa0100010:CDS | 35.0% | |
| TCATCGTCATCTGAATCATT+AGG | - | chr1_3:6420354-6420373 | None:intergenic | 35.0% | |
| AAGAGATGACTTTGACAAAG+AGG | + | chr1_3:6420386-6420405 | Msa0100010:CDS | 35.0% | |
| TCATGCATGCATCATATACT+TGG | + | chr1_3:6420727-6420746 | Msa0100010:intron | 35.0% | |
| ! | TATTCTACTAACCGACTCAA+CGG | + | chr1_3:6420860-6420879 | Msa0100010:intron | 35.0% |
| ATATTCTAACTCCGTTGAGT+CGG | - | chr1_3:6420874-6420893 | None:intergenic | 35.0% | |
| !!! | CTGTTTCTTTTTTTGAAGGG+AGG | - | chr1_3:6420973-6420992 | None:intergenic | 35.0% |
| TGTTACAGTTATTGTGCACT+AGG | - | chr1_3:6421004-6421023 | None:intergenic | 35.0% | |
| TATTTAGATAGGGTCAGTTG+AGG | - | chr1_3:6421088-6421107 | None:intergenic | 35.0% | |
| ATGAATACACTCCATGAAGA+TGG | - | chr1_3:6421150-6421169 | None:intergenic | 35.0% | |
| AGACTCTAACAACAGGAATA+TGG | - | chr1_3:6421412-6421431 | None:intergenic | 35.0% | |
| TATCAGGCATAGAATATGGT+TGG | + | chr1_3:6421456-6421475 | Msa0100010:intron | 35.0% | |
| TAGCTAAAAACTTATGCCAG+TGG | - | chr1_3:6421763-6421782 | None:intergenic | 35.0% | |
| CGAATGAATATGATACAGGT+AGG | - | chr1_3:6421819-6421838 | None:intergenic | 35.0% | |
| ACCTGTATCATATTCATTCG+AGG | + | chr1_3:6421819-6421838 | Msa0100010:intron | 35.0% | |
| TCCTCGAATGAATATGATAC+AGG | - | chr1_3:6421823-6421842 | None:intergenic | 35.0% | |
| !! | TACATTGGTGTTAGTATCCA+TGG | + | chr1_3:6421961-6421980 | Msa0100010:intron | 35.0% |
| TTCATGTTGTACTTACCAAG+TGG | + | chr1_3:6422175-6422194 | Msa0100010:CDS | 35.0% | |
| TGTACTTACCAAGTGGAAAA+AGG | + | chr1_3:6422182-6422201 | Msa0100010:CDS | 35.0% | |
| TGCATCCTATCTGAATGATA+CGG | + | chr1_3:6422209-6422228 | Msa0100010:CDS | 35.0% | |
| GAACATGAGTAACTTCAACA+AGG | - | chr1_3:6422264-6422283 | None:intergenic | 35.0% | |
| ! | TCGATCTGGAGCAAAAAAAT+TGG | - | chr1_3:6422469-6422488 | None:intergenic | 35.0% |
| ! | TTGAGTTGTCCTTATTCAGT+TGG | + | chr1_3:6422584-6422603 | Msa0100010:intron | 35.0% |
| TTAGACAGTGTTATATCCTC+TGG | + | chr1_3:6422756-6422775 | Msa0100010:intron | 35.0% | |
| ! | AAGTATTTTCCTATGACCAG+AGG | - | chr1_3:6422775-6422794 | None:intergenic | 35.0% |
| GTTGGAACTTCAATTGTGTT+AGG | - | chr1_3:6422888-6422907 | None:intergenic | 35.0% | |
| TTTCTGTCAGCAAAGAAAGT+AGG | - | chr1_3:6422926-6422945 | None:intergenic | 35.0% | |
| GCAATATCTGAAAGCAGTTA+AGG | - | chr1_3:6423080-6423099 | None:intergenic | 35.0% | |
| ATTGCACTACATGTATAACG+AGG | + | chr1_3:6423095-6423114 | Msa0100010:CDS | 35.0% | |
| CTTGAATTAATGGTTGAGCT+TGG | - | chr1_3:6423200-6423219 | None:intergenic | 35.0% | |
| GGACATCTATATATTTGTCG+AGG | + | chr1_3:6423403-6423422 | Msa0100010:three_prime_UTR | 35.0% | |
| ! | AGTGTGATTCTCTTTTCACA+CGG | + | chr1_3:6423485-6423504 | Msa0100010:three_prime_UTR | 35.0% |
| ! | TATCCGTGTTCTTTTCAGTT+AGG | + | chr1_3:6423508-6423527 | Msa0100010:three_prime_UTR | 35.0% |
| GGATTGGATTATCAAAGATG+TGG | - | chr1_3:6423677-6423696 | None:intergenic | 35.0% | |
| GATTCATGGATTTGTGAGTG+AGG | - | chr1_3:6409582-6409601 | None:intergenic | 40.0% | |
| AACATGCGGTATCAGATTCA+TGG | - | chr1_3:6409596-6409615 | None:intergenic | 40.0% | |
| CAGTGGCAGAAAACTGAATA+AGG | - | chr1_3:6409681-6409700 | None:intergenic | 40.0% | |
| ATGGAGGTTGAAGAAAACAG+TGG | - | chr1_3:6409698-6409717 | None:intergenic | 40.0% | |
| !! | TCCAGGAATTTTGGAAAGTG+GGG | - | chr1_3:6410109-6410128 | None:intergenic | 40.0% |
| !! | GATCCAGGAATTTTGGAAAG+TGG | - | chr1_3:6410111-6410130 | None:intergenic | 40.0% |
| ! | GTTTCGGTGATCAAAAGTGT+AGG | + | chr1_3:6410820-6410839 | Msa0100010:intron | 40.0% |
| TTGAAATGGAGAAGAGCCTT+AGG | + | chr1_3:6410873-6410892 | Msa0100010:intron | 40.0% | |
| CTTATCGCACAAAACACCTA+AGG | - | chr1_3:6410892-6410911 | None:intergenic | 40.0% | |
| ! | AAAGTACCACTTAAGCCGAA+AGG | + | chr1_3:6410912-6410931 | Msa0100010:intron | 40.0% |
| AACTTTCCTTTCGGCTTAAG+TGG | - | chr1_3:6410921-6410940 | None:intergenic | 40.0% | |
| AGCCGAAAGGAAAGTTCTAT+CGG | + | chr1_3:6410925-6410944 | Msa0100010:intron | 40.0% | |
| GTCCGATAGAACTTTCCTTT+CGG | - | chr1_3:6410930-6410949 | None:intergenic | 40.0% | |
| ACCGGCAATGATATATGGTA+CGG | + | chr1_3:6410959-6410978 | Msa0100010:intron | 40.0% | |
| TCCGTACCATATATCATTGC+CGG | - | chr1_3:6410963-6410982 | None:intergenic | 40.0% | |
| TGATATATGGTACGGAGTGT+TGG | + | chr1_3:6410967-6410986 | Msa0100010:intron | 40.0% | |
| ! | GATATATGGTACGGAGTGTT+GGG | + | chr1_3:6410968-6410987 | Msa0100010:intron | 40.0% |
| AGACTAGACAGGATAGGATT+AGG | + | chr1_3:6411060-6411079 | Msa0100010:intron | 40.0% | |
| TGATACCATTAGAGAGAGTG+TGG | + | chr1_3:6411085-6411104 | Msa0100010:intron | 40.0% | |
| ! | GATACCATTAGAGAGAGTGT+GGG | + | chr1_3:6411086-6411105 | Msa0100010:intron | 40.0% |
| ! | ATACCATTAGAGAGAGTGTG+GGG | + | chr1_3:6411087-6411106 | Msa0100010:intron | 40.0% |
| TCTTCTTACAACGGCATCTA+CGG | - | chr1_3:6411180-6411199 | None:intergenic | 40.0% | |
| GAGGTCACTGAATCCATATA+TGG | + | chr1_3:6411284-6411303 | Msa0100010:intron | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+GGG | - | chr1_3:6411353-6411372 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCTCACTAAGT+GGG | - | chr1_3:6411354-6411373 | None:intergenic | 40.0% |
| ! | AAGGCTTGGTTGTTGTTGTA+AGG | + | chr1_3:6411366-6411385 | Msa0100010:intron | 40.0% |
| !! | TTGTAAGGTGCTATTGCCAT+TGG | + | chr1_3:6411381-6411400 | Msa0100010:intron | 40.0% |
| ATCATCGCAACAATCACCAA+TGG | - | chr1_3:6411400-6411419 | None:intergenic | 40.0% | |
| GAAAATAGGCATAGGTGGTT+TGG | + | chr1_3:6411536-6411555 | Msa0100010:intron | 40.0% | |
| AGGCTGTATGGAAGAACTTA+TGG | + | chr1_3:6411851-6411870 | Msa0100010:intron | 40.0% | |
| ATCATTGGAACATTCGCCAA+TGG | - | chr1_3:6412258-6412277 | None:intergenic | 40.0% | |
| TCTCAAAATTGTGTCAGTGC+TGG | + | chr1_3:6412420-6412439 | Msa0100010:CDS | 40.0% | |
| TGCAATGGGGCTAAAACTTA+GGG | - | chr1_3:6414006-6414025 | None:intergenic | 40.0% | |
| TTGCAATGGGGCTAAAACTT+AGG | - | chr1_3:6414005-6414024 | None:intergenic | 40.0% | |
| AAAGGGCCAAATTTGCAATG+GGG | - | chr1_3:6412875-6412894 | None:intergenic | 40.0% | |
| CCGGTCAAAATTGGCAAAAA+GGG | - | chr1_3:6412892-6412911 | None:intergenic | 40.0% | |
| !! | CCCTTTTTGCCAATTTTGAC+CGG | + | chr1_3:6412889-6412908 | Msa0100010:intron | 40.0% |
| ACCGGTCAAAATTGGCAAAA+AGG | - | chr1_3:6412893-6412912 | None:intergenic | 40.0% | |
| ATTTGGAGATTTATGGGTGG+AGG | - | chr1_3:6413136-6413155 | None:intergenic | 40.0% | |
| !! | TTGGTTTTCTAGACATGGAG+TGG | + | chr1_3:6413593-6413612 | Msa0100010:intron | 40.0% |
| !!! | GACACATGTCACTTTTGCAT+TGG | - | chr1_3:6413747-6413766 | None:intergenic | 40.0% |
| TTGCAATGGGGCTAAAACTT+AGG | + | chr1_3:6414005-6414024 | Msa0100010:intron | 40.0% | |
| TGCAATGGGGCTAAAACTTA+GGG | + | chr1_3:6414006-6414025 | Msa0100010:intron | 40.0% | |
| CATGTCACTAAGCCTATTGT+TGG | - | chr1_3:6414160-6414179 | None:intergenic | 40.0% | |
| ! | ATGCAGGGATTTTTCTGCAA+GGG | + | chr1_3:6414279-6414298 | Msa0100010:intron | 40.0% |
| ATGAATGGATCCCAAACATG+GGG | + | chr1_3:6414351-6414370 | Msa0100010:intron | 40.0% | |
| ATACTGTTACCCCCATGTTT+GGG | - | chr1_3:6414364-6414383 | None:intergenic | 40.0% | |
| AATACTGTTACCCCCATGTT+TGG | - | chr1_3:6414365-6414384 | None:intergenic | 40.0% | |
| GTTAGTAGTTAGAGAGGGAA+AGG | - | chr1_3:6414426-6414445 | None:intergenic | 40.0% | |
| CAGCAGTTAGTAGTTAGAGA+GGG | - | chr1_3:6414431-6414450 | None:intergenic | 40.0% | |
| ATGTTTCGAAGATGTACCTG+AGG | + | chr1_3:6414607-6414626 | Msa0100010:intron | 40.0% | |
| !! | ATGTACCTGAGGAGTATTGA+GGG | + | chr1_3:6414618-6414637 | Msa0100010:intron | 40.0% |
| GCCATAACCTTATCTAGACT+AGG | - | chr1_3:6414826-6414845 | None:intergenic | 40.0% | |
| GTAAATAGGCTAAGGACTTC+CGG | - | chr1_3:6415965-6415984 | None:intergenic | 40.0% | |
| TGCTGACAGTGTCATAACTT+CGG | - | chr1_3:6416550-6416569 | None:intergenic | 40.0% | |
| AAGTTATGACACTGTCAGCA+AGG | + | chr1_3:6416550-6416569 | Msa0100010:CDS | 40.0% | |
| TCATAGATGGACATATCCAC+TGG | + | chr1_3:6416580-6416599 | Msa0100010:CDS | 40.0% | |
| TTCATAACATCTGGTACCAG+TGG | - | chr1_3:6416599-6416618 | None:intergenic | 40.0% | |
| TATCACCCTTGTAGATTGCT+GGG | + | chr1_3:6416885-6416904 | Msa0100010:intron | 40.0% | |
| TTTGACCCAGCAATCTACAA+GGG | - | chr1_3:6416893-6416912 | None:intergenic | 40.0% | |
| ! | TTTTGACCCAGCAATCTACA+AGG | - | chr1_3:6416894-6416913 | None:intergenic | 40.0% |
| GCTTGCGAAATATCTGATAG+GGG | - | chr1_3:6416981-6417000 | None:intergenic | 40.0% | |
| GTGCTTGCGAAATATCTGAT+AGG | - | chr1_3:6416983-6417002 | None:intergenic | 40.0% | |
| CAGATCCTATAACAGAGAAC+GGG | - | chr1_3:6417022-6417041 | None:intergenic | 40.0% | |
| CCAGATCCTATAACAGAGAA+CGG | - | chr1_3:6417023-6417042 | None:intergenic | 40.0% | |
| ATAGGATCTGGCACCAAAAT+TGG | + | chr1_3:6417032-6417051 | Msa0100010:CDS | 40.0% | |
| ! | CTTCGTGTTCTTGCCAATTT+TGG | - | chr1_3:6417048-6417067 | None:intergenic | 40.0% |
| GACAATGTCACCATAGAAGA+TGG | + | chr1_3:6417140-6417159 | Msa0100010:CDS | 40.0% | |
| AAGTTCACAGCCATCTTCTA+TGG | - | chr1_3:6417153-6417172 | None:intergenic | 40.0% | |
| TAGAAGATGGCTGTGAACTT+AGG | + | chr1_3:6417153-6417172 | Msa0100010:CDS | 40.0% | |
| TATGAAATCAGGATCTGCTC+TGG | + | chr1_3:6417202-6417221 | Msa0100010:CDS | 40.0% | |
| TTAAAAGACAGCACAACACC+AGG | - | chr1_3:6417230-6417249 | None:intergenic | 40.0% | |
| !!! | TGGTGTTGTGCTGTCTTTTA+AGG | + | chr1_3:6417229-6417248 | Msa0100010:CDS | 40.0% |
| CACACTTCACCACAATATTC+AGG | + | chr1_3:6417324-6417343 | Msa0100010:intron | 40.0% | |
| ACTTCACCACAATATTCAGG+TGG | + | chr1_3:6417327-6417346 | Msa0100010:intron | 40.0% | |
| TAGTGACCACCTGAATATTG+TGG | - | chr1_3:6417336-6417355 | None:intergenic | 40.0% | |
| TCATGTTTCCAGGTTGTAGT+TGG | + | chr1_3:6417671-6417690 | Msa0100010:intron | 40.0% | |
| CATGTTTCCAGGTTGTAGTT+GGG | + | chr1_3:6417672-6417691 | Msa0100010:intron | 40.0% | |
| ! | AATTTTCCTCACTATCAGCC+AGG | - | chr1_3:6417901-6417920 | None:intergenic | 40.0% |
| AAGATTCAGTGTATGCACCT+CGG | - | chr1_3:6418050-6418069 | None:intergenic | 40.0% | |
| CAACACATGTACAGGAATTC+AGG | - | chr1_3:6418123-6418142 | None:intergenic | 40.0% | |
| CTGAATTCCTGTACATGTGT+TGG | + | chr1_3:6418121-6418140 | Msa0100010:intron | 40.0% | |
| AAGCTGTACTTGTGTGGTTT+GGG | - | chr1_3:6418160-6418179 | None:intergenic | 40.0% | |
| ! | TTCTAGAAGCTGTACTTGTG+TGG | - | chr1_3:6418166-6418185 | None:intergenic | 40.0% |
| TAAACAGAGGGAATCCTAGA+CGG | + | chr1_3:6418258-6418277 | Msa0100010:intron | 40.0% | |
| !! | AAGTTTGCTGAGAGTTGTGT+AGG | + | chr1_3:6418294-6418313 | Msa0100010:intron | 40.0% |
| AGAGAAGTTCTCTCTGATCT+AGG | + | chr1_3:6418317-6418336 | Msa0100010:intron | 40.0% | |
| !! | ACTTTGTTGGCTTGAGTACA+TGG | + | chr1_3:6418635-6418654 | Msa0100010:intron | 40.0% |
| !! | CTTTGTTGGCTTGAGTACAT+GGG | + | chr1_3:6418636-6418655 | Msa0100010:intron | 40.0% |
| TTGAGGTCCTTAACTGTAAC+TGG | + | chr1_3:6418978-6418997 | Msa0100010:intron | 40.0% | |
| !! | ACATTTTAACCCTGCTTCAG+AGG | + | chr1_3:6419236-6419255 | Msa0100010:CDS | 40.0% |
| GTTACTTAGTATCTTCAGGC+TGG | - | chr1_3:6419500-6419519 | None:intergenic | 40.0% | |
| CTAACAGATCTACACAGGAT+AGG | + | chr1_3:6419610-6419629 | Msa0100010:intron | 40.0% | |
| CAGGGTGAAATTAAAGCTAG+AGG | - | chr1_3:6419640-6419659 | None:intergenic | 40.0% | |
| CATAATATATGCAAGGTCCG+GGG | - | chr1_3:6419781-6419800 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr1_3:6419782-6419801 | None:intergenic | 40.0% | |
| GACCATGCAAATGATTGTAG+TGG | + | chr1_3:6420031-6420050 | Msa0100010:intron | 40.0% | |
| !! | TAATCAGCTAGGTTTTGGTG+GGG | + | chr1_3:6420158-6420177 | Msa0100010:intron | 40.0% |
| GAAAGCTATGGAAGATGAAC+TGG | + | chr1_3:6420275-6420294 | Msa0100010:CDS | 40.0% | |
| !! | CTTACATCGGTTGCATTTTG+TGG | + | chr1_3:6420429-6420448 | Msa0100010:intron | 40.0% |
| ! | AGGTTGAAGCAACTTTTCTG+AGG | + | chr1_3:6420482-6420501 | Msa0100010:intron | 40.0% |
| ! | GGTTGAAGCAACTTTTCTGA+GGG | + | chr1_3:6420483-6420502 | Msa0100010:intron | 40.0% |
| AGTTCGGACATGAAAACTGA+AGG | - | chr1_3:6420771-6420790 | None:intergenic | 40.0% | |
| GTGCACAATAACTGTAACAC+AGG | + | chr1_3:6421005-6421024 | Msa0100010:intron | 40.0% | |
| TAGAAGCTATGCCATCTTCA+TGG | + | chr1_3:6421136-6421155 | Msa0100010:intron | 40.0% | |
| GAACTGCAATTCTTTGACTC+CGG | + | chr1_3:6421186-6421205 | Msa0100010:intron | 40.0% | |
| AACACATATGACGAGAACAC+CGG | - | chr1_3:6421208-6421227 | None:intergenic | 40.0% | |
| ACTTTGAATCTGCATTCGCT+AGG | + | chr1_3:6421248-6421267 | Msa0100010:intron | 40.0% | |
| AGGGATATGGTTGGAAAACT+TGG | + | chr1_3:6421497-6421516 | Msa0100010:intron | 40.0% | |
| GTTGGAAAACTTGGCATCTT+GGG | + | chr1_3:6421506-6421525 | Msa0100010:intron | 40.0% | |
| ACTGAAATTGAAAGGGGTAG+AGG | + | chr1_3:6421633-6421652 | Msa0100010:intron | 40.0% | |
| CTGAAATTGAAAGGGGTAGA+GGG | + | chr1_3:6421634-6421653 | Msa0100010:intron | 40.0% | |
| GTAATAGCGCTTGCTCTATA+TGG | + | chr1_3:6421910-6421929 | Msa0100010:intron | 40.0% | |
| ! | TGCAAGAACCTTTTTCCACT+TGG | - | chr1_3:6422193-6422212 | None:intergenic | 40.0% |
| ! | AATGTGTTTGGAATCTGCGA+AGG | + | chr1_3:6422510-6422529 | Msa0100010:CDS | 40.0% |
| GTTTGCTCCATTGTTCACAA+AGG | + | chr1_3:6422534-6422553 | Msa0100010:CDS | 40.0% | |
| GACATGCTACCAACTGAATA+AGG | - | chr1_3:6422596-6422615 | None:intergenic | 40.0% | |
| GTGTTATATCCTCTGGTCAT+AGG | + | chr1_3:6422763-6422782 | Msa0100010:intron | 40.0% | |
| GTTAAGGAGTCAAAACACGA+AGG | - | chr1_3:6423064-6423083 | None:intergenic | 40.0% | |
| AGTTGGGAAGATGAGAAGAA+AGG | + | chr1_3:6423144-6423163 | Msa0100010:CDS | 40.0% | |
| TTGTCTGTAGTGGCTAAAAG+AGG | + | chr1_3:6423332-6423351 | Msa0100010:intron | 40.0% | |
| TTCGTCTTCATCGTCTTCTT+CGG | - | chr1_3:6423361-6423380 | None:intergenic | 40.0% | |
| AGTTGAATGGCAAAAGGGAT+TGG | - | chr1_3:6423693-6423712 | None:intergenic | 40.0% | |
| ATGGATTTGTGAGTGAGGGA+GGG | - | chr1_3:6409577-6409596 | None:intergenic | 45.0% | |
| TGGAGTGCAGCAAGTATGAT+GGG | - | chr1_3:6409655-6409674 | None:intergenic | 45.0% | |
| ATGGAGTGCAGCAAGTATGA+TGG | - | chr1_3:6409656-6409675 | None:intergenic | 45.0% | |
| !! | CCAGGAATTTTGGAAAGTGG+GGG | - | chr1_3:6410108-6410127 | None:intergenic | 45.0% |
| !!! | AGTGACGGATCCAGGAATTT+TGG | - | chr1_3:6410118-6410137 | None:intergenic | 45.0% |
| GTCAGACCGGCAATGATATA+TGG | + | chr1_3:6410954-6410973 | Msa0100010:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1_3:6411004-6411023 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1_3:6411007-6411026 | Msa0100010:intron | 45.0% | |
| AGGATGTTGTGTTGGATGAG+TGG | + | chr1_3:6411035-6411054 | Msa0100010:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | + | chr1_3:6411049-6411068 | Msa0100010:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | chr1_3:6411054-6411073 | Msa0100010:intron | 45.0% | |
| ! | TACCATTAGAGAGAGTGTGG+GGG | + | chr1_3:6411088-6411107 | Msa0100010:intron | 45.0% |
| CTTCTTACAACGGCATCTAC+GGG | - | chr1_3:6411179-6411198 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1_3:6411202-6411221 | Msa0100010:intron | 45.0% | |
| AGTCAGGTTAGAAGAGGTAG+AGG | + | chr1_3:6411218-6411237 | Msa0100010:intron | 45.0% | |
| CTTATCTCACTAAGTGGGGT+CGG | - | chr1_3:6411349-6411368 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCTCACTAAG+TGG | - | chr1_3:6411355-6411374 | None:intergenic | 45.0% |
| CCACTTAGTGAGATAAGGCT+TGG | + | chr1_3:6411352-6411371 | Msa0100010:intron | 45.0% | |
| GTGGTAAGACTAGATGGGAT+AGG | + | chr1_3:6411451-6411470 | Msa0100010:intron | 45.0% | |
| AGCTAGGAGAGTAGATCAGA+TGG | + | chr1_3:6411573-6411592 | Msa0100010:intron | 45.0% | |
| TAGGAGAGTAGATCAGATGG+AGG | + | chr1_3:6411576-6411595 | Msa0100010:intron | 45.0% | |
| ! | AGAAGGCTTTTCCGACTAAG+CGG | - | chr1_3:6411717-6411736 | None:intergenic | 45.0% |
| TTGACATGGCTTGAATCAGC+TGG | + | chr1_3:6412288-6412307 | Msa0100010:CDS | 45.0% | |
| TGAATCAGCTGGTGTAGAAG+AGG | + | chr1_3:6412299-6412318 | Msa0100010:CDS | 45.0% | |
| TGTTATATACGAGCGCAACG+TGG | + | chr1_3:6412455-6412474 | Msa0100010:CDS | 45.0% | |
| CAATGGGGCTAAAACTTAGG+GGG | - | chr1_3:6414008-6414027 | None:intergenic | 45.0% | |
| GCAATGGGGCTAAAACTTAG+GGG | - | chr1_3:6414007-6414026 | None:intergenic | 45.0% | |
| !! | AAGCGTTGACCGGTCAAAAT+TGG | - | chr1_3:6412901-6412920 | None:intergenic | 45.0% |
| GAAGAGAACGAGAGTGAAAG+AGG | - | chr1_3:6413108-6413127 | None:intergenic | 45.0% | |
| !!! | TTTCTGGTGTCGTGCTTTTC+TGG | - | chr1_3:6413294-6413313 | None:intergenic | 45.0% |
| !! | AGGCGTTGACCGTTCAAAAT+TGG | + | chr1_3:6413967-6413986 | Msa0100010:intron | 45.0% |
| GCAATGGGGCTAAAACTTAG+GGG | + | chr1_3:6414007-6414026 | Msa0100010:intron | 45.0% | |
| CAATGGGGCTAAAACTTAGG+GGG | + | chr1_3:6414008-6414027 | Msa0100010:intron | 45.0% | |
| ! | CATGCAGGGATTTTTCTGCA+AGG | + | chr1_3:6414278-6414297 | Msa0100010:intron | 45.0% |
| TGAATGGATCCCAAACATGG+GGG | + | chr1_3:6414352-6414371 | Msa0100010:intron | 45.0% | |
| GCAGCAGTTAGTAGTTAGAG+AGG | - | chr1_3:6414432-6414451 | None:intergenic | 45.0% | |
| !! | GATGTACCTGAGGAGTATTG+AGG | + | chr1_3:6414617-6414636 | Msa0100010:intron | 45.0% |
| !! | TGTACCTGAGGAGTATTGAG+GGG | + | chr1_3:6414619-6414638 | Msa0100010:intron | 45.0% |
| TATTCCCCTCAATACTCCTC+AGG | - | chr1_3:6414626-6414645 | None:intergenic | 45.0% | |
| GGTACATATCGGACCCATAT+CGG | + | chr1_3:6414695-6414714 | Msa0100010:intron | 45.0% | |
| TCTAGACTAGGAGGTAGCTA+GGG | - | chr1_3:6414814-6414833 | None:intergenic | 45.0% | |
| ATCTAGACTAGGAGGTAGCT+AGG | - | chr1_3:6414815-6414834 | None:intergenic | 45.0% | |
| GCTACCTCCTAGTCTAGATA+AGG | + | chr1_3:6414816-6414835 | Msa0100010:intron | 45.0% | |
| GGAGACTTTGTCCTTATCAG+TGG | + | chr1_3:6415226-6415245 | Msa0100010:CDS | 45.0% | |
| ! | AAGCAACATGTCGCTTACTC+AGG | + | chr1_3:6415258-6415277 | Msa0100010:CDS | 45.0% |
| TTACATTGACATCTGCTCGC+CGG | + | chr1_3:6415943-6415962 | Msa0100010:CDS | 45.0% | |
| CAAAATGACGCCGAAGATGT+TGG | - | chr1_3:6416003-6416022 | None:intergenic | 45.0% | |
| !! | TCTTCGGCGTCATTTTGTCA+AGG | + | chr1_3:6416006-6416025 | Msa0100010:CDS | 45.0% |
| !! | CTTCGGCGTCATTTTGTCAA+GGG | + | chr1_3:6416007-6416026 | Msa0100010:CDS | 45.0% |
| AGCTACGAAGCTTGAAAGAC+AGG | + | chr1_3:6416631-6416650 | Msa0100010:CDS | 45.0% | |
| GCTACGAAGCTTGAAAGACA+GGG | + | chr1_3:6416632-6416651 | Msa0100010:CDS | 45.0% | |
| GAAAGACAGGGAATATACCG+TGG | + | chr1_3:6416644-6416663 | Msa0100010:CDS | 45.0% | |
| AATATACCGTGGCTCAGGTA+TGG | + | chr1_3:6416655-6416674 | Msa0100010:intron | 45.0% | |
| TTTCATCCATACCTGAGCCA+CGG | - | chr1_3:6416664-6416683 | None:intergenic | 45.0% | |
| !! | TCGGTGTTAATTGGGTGTGT+TGG | + | chr1_3:6416687-6416706 | Msa0100010:intron | 45.0% |
| GTATCACCCTTGTAGATTGC+TGG | + | chr1_3:6416884-6416903 | Msa0100010:intron | 45.0% | |
| CAAGCACAATCAGCTGTTGT+TGG | + | chr1_3:6416996-6417015 | Msa0100010:CDS | 45.0% | |
| CCGTTCTCTGTTATAGGATC+TGG | + | chr1_3:6417020-6417039 | Msa0100010:CDS | 45.0% | |
| TTAAATTCCGTCGTCGGAGT+AGG | + | chr1_3:6417071-6417090 | Msa0100010:CDS | 45.0% | |
| GTCGGAGTAGGATGCAAAAT+CGG | + | chr1_3:6417083-6417102 | Msa0100010:CDS | 45.0% | |
| TCGGAGTAGGATGCAAAATC+GGG | + | chr1_3:6417084-6417103 | Msa0100010:CDS | 45.0% | |
| GGGTCAACTGTACACATAGA+GGG | + | chr1_3:6417104-6417123 | Msa0100010:CDS | 45.0% | |
| TAGGCATGCCATTGTATGTG+AGG | + | chr1_3:6417172-6417191 | Msa0100010:CDS | 45.0% | |
| AGGCATGCCATTGTATGTGA+GGG | + | chr1_3:6417173-6417192 | Msa0100010:CDS | 45.0% | |
| AATCACCCCCTCACATACAA+TGG | - | chr1_3:6417183-6417202 | None:intergenic | 45.0% | |
| GAGGGGGTGATTATGAAATC+AGG | + | chr1_3:6417191-6417210 | Msa0100010:CDS | 45.0% | |
| AGTATCTCTACTACAGCAGC+CGG | + | chr1_3:6417724-6417743 | Msa0100010:CDS | 45.0% | |
| ! | ATATTGCCTGGCTGATAGTG+AGG | + | chr1_3:6417892-6417911 | Msa0100010:intron | 45.0% |
| AATTGGGCCAACACATGTAC+AGG | - | chr1_3:6418131-6418150 | None:intergenic | 45.0% | |
| ! | ACATGTGTTGGCCCAATTAC+TGG | + | chr1_3:6418133-6418152 | Msa0100010:intron | 45.0% |
| ! | CATGTGTTGGCCCAATTACT+GGG | + | chr1_3:6418134-6418153 | Msa0100010:intron | 45.0% |
| GAAGCTGTACTTGTGTGGTT+TGG | - | chr1_3:6418161-6418180 | None:intergenic | 45.0% | |
| TAGAAGCCTGTAGAAGCTGT+GGG | + | chr1_3:6418181-6418200 | Msa0100010:intron | 45.0% | |
| CTGATCTAGGAGCTTAACTC+TGG | + | chr1_3:6418330-6418349 | Msa0100010:intron | 45.0% | |
| TCTAGGAGCTTAACTCTGGT+AGG | + | chr1_3:6418334-6418353 | Msa0100010:intron | 45.0% | |
| GGTAGGAGTTCTTTGAACTC+TGG | + | chr1_3:6418351-6418370 | Msa0100010:intron | 45.0% | |
| ATGGGTCAACCTCTCTTGTA+TGG | + | chr1_3:6418654-6418673 | Msa0100010:intron | 45.0% | |
| ATCTGACTTATCCACTGTGC+TGG | - | chr1_3:6419187-6419206 | None:intergenic | 45.0% | |
| AGCACAGTGGATAAGTCAGA+TGG | + | chr1_3:6419186-6419205 | Msa0100010:CDS | 45.0% | |
| TCATTGATGTGAGAGGGAGA+TGG | + | chr1_3:6419561-6419580 | Msa0100010:intron | 45.0% | |
| CATTGATGTGAGAGGGAGAT+GGG | + | chr1_3:6419562-6419581 | Msa0100010:intron | 45.0% | |
| !!! | TTTTTTTTTGGTGGTGGCCG+TGG | + | chr1_3:6419749-6419768 | Msa0100010:intron | 45.0% |
| TGAGCTTAGCTCGGTTAGTA+GGG | - | chr1_3:6419810-6419829 | None:intergenic | 45.0% | |
| ATGTCCTTGTGAGCTTAGCT+CGG | - | chr1_3:6419819-6419838 | None:intergenic | 45.0% | |
| GTTTGGCCAAAATGTGAAGG+AGG | + | chr1_3:6420189-6420208 | Msa0100010:CDS | 45.0% | |
| ! | TCATGGCCTCCTTCACATTT+TGG | - | chr1_3:6420198-6420217 | None:intergenic | 45.0% |
| AAAATGTGAAGGAGGCCATG+AGG | + | chr1_3:6420197-6420216 | Msa0100010:CDS | 45.0% | |
| TTTGGAGGCAGTGAAAGCTA+TGG | + | chr1_3:6420263-6420282 | Msa0100010:CDS | 45.0% | |
| GCAGTATTCTTCCACCTTCT+GGG | + | chr1_3:6420313-6420332 | Msa0100010:CDS | 45.0% | |
| CAGTATTCTTCCACCTTCTG+GGG | + | chr1_3:6420314-6420333 | Msa0100010:CDS | 45.0% | |
| ! | TCTGGCATCCCTCTGTATTT+TGG | + | chr1_3:6420646-6420665 | Msa0100010:intron | 45.0% |
| TAGATAGGGTCAGTTGAGGT+TGG | - | chr1_3:6421084-6421103 | None:intergenic | 45.0% | |
| ! | AAGATAGCTGCTGATTGTGC+TGG | + | chr1_3:6421318-6421337 | Msa0100010:CDS | 45.0% |
| AAGCTCACCAGCTGAACTAT+GGG | - | chr1_3:6421385-6421404 | None:intergenic | 45.0% | |
| AAAGCTCACCAGCTGAACTA+TGG | - | chr1_3:6421386-6421405 | None:intergenic | 45.0% | |
| GGTTGGAAAACTTGGCATCT+TGG | + | chr1_3:6421505-6421524 | Msa0100010:intron | 45.0% | |
| TTAACTGGGAGTCTCTAGTG+AGG | + | chr1_3:6421586-6421605 | Msa0100010:intron | 45.0% | |
| TAGAGCAAGCGCTATTACAG+TGG | - | chr1_3:6421908-6421927 | None:intergenic | 45.0% | |
| CTCGTCCGTATCATTCAGAT+AGG | - | chr1_3:6422217-6422236 | None:intergenic | 45.0% | |
| !! | CAGTTGGTAGCATGTCAGAA+AGG | + | chr1_3:6422600-6422619 | Msa0100010:intron | 45.0% |
| AGGCGAGCGTGAAAATTTGT+TGG | - | chr1_3:6422868-6422887 | None:intergenic | 45.0% | |
| AGGCGAGCGTGAAAATTTGT+TGG | - | chr1_3:6422868-6422887 | None:intergenic | 45.0% | |
| TCGTCTTCATCGTCTTCTTC+GGG | - | chr1_3:6423360-6423379 | None:intergenic | 45.0% | |
| !!! | TAACTTTTAAAATTTTTAAT+TGG | + | chr1_3:6410319-6410338 | Msa0100010:intron | 5.0% |
| !!! | AACTTTTAAAATTTTTAATT+GGG | + | chr1_3:6410320-6410339 | Msa0100010:intron | 5.0% |
| !! | TAAATAAAAAAATGATTATA+TGG | - | chr1_3:6412971-6412990 | None:intergenic | 5.0% |
| !! | TATATTAACTATTAAAATAT+TGG | - | chr1_3:6414111-6414130 | None:intergenic | 5.0% |
| CATGGATTTGTGAGTGAGGG+AGG | - | chr1_3:6409578-6409597 | None:intergenic | 50.0% | |
| GGAGTGCAGCAAGTATGATG+GGG | - | chr1_3:6409654-6409673 | None:intergenic | 50.0% | |
| CCCCCACTTTCCAAAATTCC+TGG | + | chr1_3:6410105-6410124 | Msa0100010:intron | 50.0% | |
| !!! | CTTCGGTGCTCCCATTTTCT+TGG | - | chr1_3:6410362-6410381 | None:intergenic | 50.0% |
| !! | ACCGAAGAAAAGCGCTGCTA+GGG | + | chr1_3:6410375-6410394 | Msa0100010:CDS | 50.0% |
| ! | ACCCTAGCAGCGCTTTTCTT+CGG | - | chr1_3:6410379-6410398 | None:intergenic | 50.0% |
| GAACACGAACAAGCTCATCG+TGG | - | chr1_3:6410411-6410430 | None:intergenic | 50.0% | |
| GCTTGTTCGTGTTCCGTTAC+AGG | + | chr1_3:6410417-6410436 | Msa0100010:CDS | 50.0% | |
| TCCGTTACAGGCGATTCTGT+TGG | + | chr1_3:6410429-6410448 | Msa0100010:CDS | 50.0% | |
| GCCAACAGAATCGCCTGTAA+CGG | - | chr1_3:6410433-6410452 | None:intergenic | 50.0% | |
| ! | TTGGGGCGTTCAAGAGTGAT+AGG | - | chr1_3:6410481-6410500 | None:intergenic | 50.0% |
| TATCACTCTTGAACGCCCCA+AGG | + | chr1_3:6410480-6410499 | Msa0100010:CDS | 50.0% | |
| TACATCGGACCCTGCATATG+CGG | + | chr1_3:6410665-6410684 | Msa0100010:intron | 50.0% | |
| CTATCGGACAACAGTCAGAC+CGG | + | chr1_3:6410941-6410960 | Msa0100010:intron | 50.0% | |
| !! | ATATGGTACGGAGTGTTGGG+CGG | + | chr1_3:6410971-6410990 | Msa0100010:intron | 50.0% |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1_3:6411015-6411034 | Msa0100010:intron | 50.0% |
| CGGAGATGAGGATGTTGTGT+TGG | + | chr1_3:6411027-6411046 | Msa0100010:intron | 50.0% | |
| TACCCCCACACTCTCTCTAA+TGG | - | chr1_3:6411093-6411112 | None:intergenic | 50.0% | |
| GAGGAGAGTCAGGTTAGAAG+AGG | + | chr1_3:6411212-6411231 | Msa0100010:intron | 50.0% | |
| CGACCCCACTTAGTGAGATA+AGG | + | chr1_3:6411347-6411366 | Msa0100010:intron | 50.0% | |
| GGGCATGTAGAGATGTAGCT+AGG | + | chr1_3:6411557-6411576 | Msa0100010:intron | 50.0% | |
| ! | CTTTTCCGACTAAGCGGGAT+CGG | - | chr1_3:6411711-6411730 | None:intergenic | 50.0% |
| ! | GAAGGCTTTTCCGACTAAGC+GGG | - | chr1_3:6411716-6411735 | None:intergenic | 50.0% |
| GAACGAGAGTGAAAGAGGAG+AGG | - | chr1_3:6413103-6413122 | None:intergenic | 50.0% | |
| TGGAGATTTATGGGTGGAGG+AGG | - | chr1_3:6413133-6413152 | None:intergenic | 50.0% | |
| !! | TATGAATGTGTTGGCTCCGC+TGG | + | chr1_3:6414215-6414234 | Msa0100010:intron | 50.0% |
| !! | ATGAATGTGTTGGCTCCGCT+GGG | + | chr1_3:6414216-6414235 | Msa0100010:intron | 50.0% |
| GTAGTTAGAGAGGGAAAGGC+TGG | - | chr1_3:6414422-6414441 | None:intergenic | 50.0% | |
| ! | AGTCGAGACTGATGGATAGC+TGG | - | chr1_3:6415364-6415383 | None:intergenic | 50.0% |
| GCTATCCATCAGTCTCGACT+TGG | + | chr1_3:6415364-6415383 | Msa0100010:CDS | 50.0% | |
| CTTGTCATGGTGCAGAGAGA+GGG | - | chr1_3:6415512-6415531 | None:intergenic | 50.0% | |
| CCTAGCATAGCCCAATCATG+AGG | - | chr1_3:6415742-6415761 | None:intergenic | 50.0% | |
| CCTCATGATTGGGCTATGCT+AGG | + | chr1_3:6415739-6415758 | Msa0100010:intron | 50.0% | |
| GCAGACCTACATTTCGTCTG+AGG | + | chr1_3:6416211-6416230 | Msa0100010:intron | 50.0% | |
| TCCTTGCAGCATAATCTGCG+CGG | - | chr1_3:6416517-6416536 | None:intergenic | 50.0% | |
| GTTGGCCCGTTCTCTGTTAT+AGG | + | chr1_3:6417014-6417033 | Msa0100010:CDS | 50.0% | |
| TTTGCATCCTACTCCGACGA+CGG | - | chr1_3:6417081-6417100 | None:intergenic | 50.0% | |
| CGGGTCAACTGTACACATAG+AGG | + | chr1_3:6417103-6417122 | Msa0100010:CDS | 50.0% | |
| GGCATGCCATTGTATGTGAG+GGG | + | chr1_3:6417174-6417193 | Msa0100010:CDS | 50.0% | |
| GCATGCCATTGTATGTGAGG+GGG | + | chr1_3:6417175-6417194 | Msa0100010:CDS | 50.0% | |
| TTTCCAGGTTGTAGTTGGGC+AGG | + | chr1_3:6417676-6417695 | Msa0100010:intron | 50.0% | |
| TCGTCGCTATCTTCCTCAAC+CGG | - | chr1_3:6417746-6417765 | None:intergenic | 50.0% | |
| ! | GTGGTTTGGGCCCAGTAATT+GGG | - | chr1_3:6418147-6418166 | None:intergenic | 50.0% |
| ! | TGTGGTTTGGGCCCAGTAAT+TGG | - | chr1_3:6418148-6418167 | None:intergenic | 50.0% |
| CTAGAAGCCTGTAGAAGCTG+TGG | + | chr1_3:6418180-6418199 | Msa0100010:intron | 50.0% | |
| TTCTGACTGCTTCACCGTCT+AGG | - | chr1_3:6418275-6418294 | None:intergenic | 50.0% | |
| ! | CTTATCCACTGTGCTGGTGA+TGG | - | chr1_3:6419181-6419200 | None:intergenic | 50.0% |
| !! | CGGAACAAACCTCTGAAGCA+GGG | - | chr1_3:6419248-6419267 | None:intergenic | 50.0% |
| ! | CCTGCTTCAGAGGTTTGTTC+CGG | + | chr1_3:6419246-6419265 | Msa0100010:intron | 50.0% |
| GTGAGCTTAGCTCGGTTAGT+AGG | - | chr1_3:6419811-6419830 | None:intergenic | 50.0% | |
| CTAACCGAGCTAAGCTCACA+AGG | + | chr1_3:6419812-6419831 | Msa0100010:intron | 50.0% | |
| !! | TTGGTGGGGCTGGTTATGTT+TGG | + | chr1_3:6420172-6420191 | Msa0100010:CDS | 50.0% |
| AATGCCTCCACTCTTCCTCA+TGG | - | chr1_3:6420215-6420234 | None:intergenic | 50.0% | |
| GGCAGTATTCTTCCACCTTC+TGG | + | chr1_3:6420312-6420331 | Msa0100010:CDS | 50.0% | |
| TTAGGTAACAGCTCCCCAGA+AGG | - | chr1_3:6420330-6420349 | None:intergenic | 50.0% | |
| TAGGGTCAGTTGAGGTTGGA+TGG | - | chr1_3:6421080-6421099 | None:intergenic | 50.0% | |
| AGCTCACCAGCTGAACTATG+GGG | - | chr1_3:6421384-6421403 | None:intergenic | 50.0% | |
| CTTAGCATTACCCCACTAGG+AGG | - | chr1_3:6421995-6422014 | None:intergenic | 50.0% | |
| CCACTTAGCATTACCCCACT+AGG | - | chr1_3:6421998-6422017 | None:intergenic | 50.0% | |
| CCTAGTGGGGTAATGCTAAG+TGG | + | chr1_3:6421995-6422014 | Msa0100010:intron | 50.0% | |
| TCTGAATGATACGGACGAGC+AGG | + | chr1_3:6422218-6422237 | Msa0100010:CDS | 50.0% | |
| GGAAGATGAGAAGAAAGGCG+CGG | + | chr1_3:6423149-6423168 | Msa0100010:CDS | 50.0% | |
| !! | TTGTCGAGGTGCTGTCATCT+TGG | + | chr1_3:6423417-6423436 | Msa0100010:three_prime_UTR | 50.0% |
| !! | TGTCGAGGTGCTGTCATCTT+GGG | + | chr1_3:6423418-6423437 | Msa0100010:three_prime_UTR | 50.0% |
| TGTCATCTTGGGAGCTCAAG+AGG | + | chr1_3:6423429-6423448 | Msa0100010:three_prime_UTR | 50.0% | |
| GTCATCTTGGGAGCTCAAGA+GGG | + | chr1_3:6423430-6423449 | Msa0100010:three_prime_UTR | 50.0% | |
| TTGTGAGTGAGGGAGGGTGA+TGG | - | chr1_3:6409571-6409590 | None:intergenic | 55.0% | |
| !! | GTAAAGGCAGTGACGGATCC+AGG | - | chr1_3:6410126-6410145 | None:intergenic | 55.0% |
| !! | CACCGAAGAAAAGCGCTGCT+AGG | + | chr1_3:6410374-6410393 | Msa0100010:CDS | 55.0% |
| ! | AAGCGCTGCTAGGGTTTCAG+AGG | + | chr1_3:6410384-6410403 | Msa0100010:CDS | 55.0% |
| GCACTAGAGCCGCATATGCA+GGG | - | chr1_3:6410677-6410696 | None:intergenic | 55.0% | |
| TGCACTAGAGCCGCATATGC+AGG | - | chr1_3:6410678-6410697 | None:intergenic | 55.0% | |
| ! | CATATGCGGCTCTAGTGCAC+CGG | + | chr1_3:6410679-6410698 | Msa0100010:intron | 55.0% |
| ! | ATATGCGGCTCTAGTGCACC+GGG | + | chr1_3:6410680-6410699 | Msa0100010:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_3:6411341-6411360 | None:intergenic | 55.0% | |
| ACTAAGCGGGATCGGCTACA+TGG | - | chr1_3:6411703-6411722 | None:intergenic | 55.0% | |
| TGTAGCCGATCCCGCTTAGT+CGG | + | chr1_3:6411703-6411722 | Msa0100010:intron | 55.0% | |
| TTGACCGGTCAACGCTTACG+TGG | + | chr1_3:6412904-6412923 | Msa0100010:intron | 55.0% | |
| TTGAACGGTCAACGCCTACG+TGG | - | chr1_3:6413964-6413983 | None:intergenic | 55.0% | |
| CGGTACCAAGTCGAGACTGA+TGG | - | chr1_3:6415372-6415391 | None:intergenic | 55.0% | |
| TCATGGTGCAGAGAGAGGGA+AGG | - | chr1_3:6415508-6415527 | None:intergenic | 55.0% | |
| GCTTGTCATGGTGCAGAGAG+AGG | - | chr1_3:6415513-6415532 | None:intergenic | 55.0% | |
| CTCTCTGCACCATGACAAGC+AGG | + | chr1_3:6415513-6415532 | Msa0100010:CDS | 55.0% | |
| GGGCACCTCAGACGAAATGT+AGG | - | chr1_3:6416219-6416238 | None:intergenic | 55.0% | |
| TCCGCGCAGATTATGCTGCA+AGG | + | chr1_3:6416513-6416532 | Msa0100010:CDS | 55.0% | |
| CAGGGAATATACCGTGGCTC+AGG | + | chr1_3:6416650-6416669 | Msa0100010:CDS | 55.0% | |
| !! | TCAGGATCTGCTCTGGAACC+TGG | + | chr1_3:6417209-6417228 | Msa0100010:CDS | 55.0% |
| ACTCCTGCCCAACTACAACC+TGG | - | chr1_3:6417682-6417701 | None:intergenic | 55.0% | |
| TCTACTACAGCAGCCGGTTG+AGG | + | chr1_3:6417730-6417749 | Msa0100010:CDS | 55.0% | |
| AAGCCTGTAGAAGCTGTGGG+AGG | + | chr1_3:6418184-6418203 | Msa0100010:intron | 55.0% | |
| AGCCTGTAGAAGCTGTGGGA+GGG | + | chr1_3:6418185-6418204 | Msa0100010:intron | 55.0% | |
| TTCCCTCCCACAGCTTCTAC+AGG | - | chr1_3:6418190-6418209 | None:intergenic | 55.0% | |
| !! | CCGGAACAAACCTCTGAAGC+AGG | - | chr1_3:6419249-6419268 | None:intergenic | 55.0% |
| AAGGTCCGGGGTTCAAACCA+CGG | - | chr1_3:6419769-6419788 | None:intergenic | 55.0% | |
| AAGGAGGCCATGAGGAAGAG+TGG | + | chr1_3:6420205-6420224 | Msa0100010:CDS | 55.0% | |
| !! | GGAAGAGTGGAGGCATTCAG+TGG | + | chr1_3:6420218-6420237 | Msa0100010:CDS | 55.0% |
| GACTTGCCCCATAGTTCAGC+TGG | + | chr1_3:6421375-6421394 | Msa0100010:CDS | 55.0% | |
| ! | AGTGCTGAACTGTGTGCCAC+TGG | + | chr1_3:6421744-6421763 | Msa0100010:intron | 55.0% |
| ACTAGGAGGAGTCAGCTCCA+TGG | - | chr1_3:6421981-6422000 | None:intergenic | 55.0% | |
| ! | ATGGAGCTGACTCCTCCTAG+TGG | + | chr1_3:6421980-6421999 | Msa0100010:intron | 55.0% |
| ! | TGGAGCTGACTCCTCCTAGT+GGG | + | chr1_3:6421981-6422000 | Msa0100010:intron | 55.0% |
| ! | TGAGAAGAAAGGCGCGGATG+AGG | + | chr1_3:6423155-6423174 | Msa0100010:CDS | 55.0% |
| CTGCTGTGCTCATGCGAAGC+AGG | + | chr1_3:6412332-6412351 | Msa0100010:CDS | 60.0% | |
| !! | CGTGCCACGTAAGCGTTGAC+CGG | - | chr1_3:6412911-6412930 | None:intergenic | 60.0% |
| GGGGCTCAACCTGCTTGTCA+TGG | - | chr1_3:6415525-6415544 | None:intergenic | 60.0% | |
| TGCAGCCATCACCAGCACAG+TGG | + | chr1_3:6419173-6419192 | Msa0100010:intron | 60.0% | |
| !! | CAGCTAGGTTTTGGTGGGGC+TGG | + | chr1_3:6420162-6420181 | Msa0100010:intron | 60.0% |
| GAGGCCATGAGGAAGAGTGG+AGG | + | chr1_3:6420208-6420227 | Msa0100010:CDS | 60.0% | |
| GGTAACAGCTCCCCAGAAGG+TGG | - | chr1_3:6420327-6420346 | None:intergenic | 60.0% | |
| ! | GGAGCTGACTCCTCCTAGTG+GGG | + | chr1_3:6421982-6422001 | Msa0100010:intron | 60.0% |
| ! | GAAGAAAGGCGCGGATGAGG+CGG | + | chr1_3:6423158-6423177 | Msa0100010:CDS | 60.0% |
| ACACACGTGGCGTGCCACGT+AGG | + | chr1_3:6413947-6413966 | Msa0100010:intron | 65.0% | |
| GGTGGCCGTGGTTTGAACCC+CGG | + | chr1_3:6419761-6419780 | Msa0100010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 6409489 | 6423730 | 6409489 | ID=Msa0100010;Name=Msa0100010 |
| chr1_3 | mRNA | 6409489 | 6423730 | 6409489 | ID=Msa0100010-mRNA-1;Parent=Msa0100010;Name=Msa0100010-mRNA-1;_AED=0.10;_eAED=0.10;_QI=249|1|1|1|0.93|0.87|16|344|723 |
| chr1_3 | exon | 6409489 | 6409734 | 6409489 | ID=Msa0100010-mRNA-1:exon:2397;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6410364 | 6410501 | 6410364 | ID=Msa0100010-mRNA-1:exon:2398;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6412246 | 6412476 | 6412246 | ID=Msa0100010-mRNA-1:exon:2399;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6415220 | 6415534 | 6415220 | ID=Msa0100010-mRNA-1:exon:2400;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6415938 | 6416045 | 6415938 | ID=Msa0100010-mRNA-1:exon:2401;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6416482 | 6416671 | 6416482 | ID=Msa0100010-mRNA-1:exon:2402;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6416988 | 6417250 | 6416988 | ID=Msa0100010-mRNA-1:exon:2403;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6417683 | 6417794 | 6417683 | ID=Msa0100010-mRNA-1:exon:2404;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6419178 | 6419257 | 6419178 | ID=Msa0100010-mRNA-1:exon:2405;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6420165 | 6420407 | 6420165 | ID=Msa0100010-mRNA-1:exon:2406;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6420484 | 6420560 | 6420484 | ID=Msa0100010-mRNA-1:exon:2407;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6421305 | 6421396 | 6421305 | ID=Msa0100010-mRNA-1:exon:2408;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6422157 | 6422239 | 6422157 | ID=Msa0100010-mRNA-1:exon:2409;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6422484 | 6422555 | 6422484 | ID=Msa0100010-mRNA-1:exon:2410;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6423093 | 6423218 | 6423093 | ID=Msa0100010-mRNA-1:exon:2411;Parent=Msa0100010-mRNA-1 |
| chr1_3 | exon | 6423342 | 6423730 | 6423342 | ID=Msa0100010-mRNA-1:exon:2412;Parent=Msa0100010-mRNA-1 |
| chr1_3 | five_prime_UTR | 6409489 | 6409734 | 6409489 | ID=Msa0100010-mRNA-1:five_prime_utr;Parent=Msa0100010-mRNA-1 |
| chr1_3 | five_prime_UTR | 6410364 | 6410366 | 6410364 | ID=Msa0100010-mRNA-1:five_prime_utr;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6410367 | 6410501 | 6410367 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6412246 | 6412476 | 6412246 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6415220 | 6415534 | 6415220 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6415938 | 6416045 | 6415938 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6416482 | 6416671 | 6416482 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6416988 | 6417250 | 6416988 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6417683 | 6417794 | 6417683 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6419178 | 6419257 | 6419178 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6420165 | 6420407 | 6420165 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6420484 | 6420560 | 6420484 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6421305 | 6421396 | 6421305 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6422157 | 6422239 | 6422157 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6422484 | 6422555 | 6422484 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6423093 | 6423218 | 6423093 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | CDS | 6423342 | 6423386 | 6423342 | ID=Msa0100010-mRNA-1:cds;Parent=Msa0100010-mRNA-1 |
| chr1_3 | three_prime_UTR | 6423387 | 6423730 | 6423387 | ID=Msa0100010-mRNA-1:three_prime_utr;Parent=Msa0100010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
