AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0100560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100560 MtrunA17_Chr1g0149581 89.188 1711 105 6 1 1676 1 1666 0.0 3093
Msa0100560 MtrunA17_Chr1g0149611 79.044 272 54 1 1405 1676 240 508 1.77e-141 446
Msa0100560 MtrunA17_Chr1g0149611 66.316 95 32 0 1314 1408 1 95 6.48e-33 135
Msa0100560 MtrunA17_Chr1g0149601 66.935 124 33 1 1048 1171 1 116 7.06e-42 151
Msa0100560 MtrunA17_Chr2g0297191 47.260 146 71 3 1531 1676 1032 1171 1.77e-32 138
Msa0100560 MtrunA17_Chr8g0347071 47.183 142 68 3 1537 1676 813 949 5.32e-31 132
Msa0100560 MtrunA17_Chr1g0147121 45.775 142 70 4 1537 1676 898 1034 1.68e-30 131
Msa0100560 MtrunA17_Chr3g0126701 45.070 142 71 3 1537 1676 927 1063 1.02e-29 129
Msa0100560 MtrunA17_Chr7g0275611 44.755 143 70 4 1537 1676 828 964 5.28e-29 126
Msa0100560 MtrunA17_Chr7g0221611 43.836 146 77 3 1531 1676 905 1045 4.19e-28 124
Msa0100560 MtrunA17_Chr3g0125251 31.455 213 127 6 1461 1672 1267 1461 2.18e-20 99.0
Msa0100560 MtrunA17_Chr1g0201311 35.461 141 86 2 1535 1675 88 223 3.20e-18 90.1
Msa0100560 MtrunA17_Chr6g0477001 32.414 145 92 2 1531 1675 112 250 1.24e-17 86.3
Msa0100560 MtrunA17_Chr1g0201621 34.752 141 87 2 1535 1675 88 223 1.78e-17 87.8
Msa0100560 MtrunA17_Chr5g0403241 31.250 160 86 4 1533 1675 1354 1506 1.60e-16 86.3
Msa0100560 MtrunA17_Chr2g0305371 33.333 144 86 3 1531 1672 333 468 1.71e-16 84.7
Msa0100560 MtrunA17_Chr5g0401921 33.071 127 79 1 1527 1653 710 830 4.42e-16 84.3
Msa0100560 MtrunA17_Chr1g0194631 33.333 123 76 1 1531 1653 610 726 6.82e-16 83.6
Msa0100560 MtrunA17_Chr4g0075321 32.500 160 84 5 1533 1675 911 1063 2.78e-14 78.6
Msa0100560 MtrunA17_Chr7g0235081 30.400 125 79 2 1531 1653 194 312 6.69e-13 72.0
Msa0100560 MtrunA17_Chr6g0460921 31.210 157 88 7 1534 1675 268 419 1.45e-12 72.0
Msa0100560 MtrunA17_Chr7g0270001 28.571 133 86 2 1531 1663 148 271 2.23e-11 67.0
Msa0100560 MtrunA17_Chr3g0080761 28.409 176 93 4 1533 1675 488 663 5.72e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100560 AT3G61740.2 45.455 143 70 3 1537 1676 845 982 6.91e-30 129
Msa0100560 AT3G61740.1 45.455 143 70 3 1537 1676 881 1018 8.04e-30 129
Msa0100560 AT5G42400.7 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.2 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.8 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.5 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.4 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.1 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.3 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT5G42400.6 44.521 146 75 3 1531 1676 1249 1388 1.43e-29 129
Msa0100560 AT4G27910.1 46.479 142 69 4 1537 1676 891 1027 1.50e-29 129
Msa0100560 AT1G05830.2 44.667 150 70 3 1531 1676 919 1059 1.09e-28 126
Msa0100560 AT1G05830.4 44.667 150 70 3 1531 1676 919 1059 1.09e-28 126
Msa0100560 AT1G05830.1 44.667 150 70 3 1531 1676 919 1059 1.09e-28 126
Msa0100560 AT1G05830.3 44.667 150 70 3 1531 1676 919 1059 1.09e-28 126
Msa0100560 AT5G53430.1 45.775 142 70 3 1537 1676 907 1043 1.49e-28 125
Msa0100560 AT2G31650.1 43.333 150 72 3 1531 1676 898 1038 9.19e-27 119
Msa0100560 AT1G77300.2 25.392 319 204 9 1367 1672 866 1163 2.81e-21 102
Msa0100560 AT1G77300.1 25.392 319 204 9 1367 1672 866 1163 3.06e-21 102
Msa0100560 AT2G23740.1 34.356 163 82 4 1533 1676 1219 1375 2.10e-17 89.7
Msa0100560 AT2G23740.3 34.356 163 82 4 1533 1676 1226 1382 2.39e-17 89.4
Msa0100560 AT2G23740.6 34.356 163 82 4 1533 1676 1226 1382 2.39e-17 89.4
Msa0100560 AT2G23740.2 34.356 163 82 4 1533 1676 1226 1382 2.39e-17 89.4
Msa0100560 AT1G02580.1 35.714 126 75 1 1531 1656 544 663 1.01e-16 86.7
Msa0100560 AT4G30860.1 35.172 145 88 2 1531 1675 326 464 1.93e-16 85.1
Msa0100560 AT1G76710.2 35.385 130 79 2 1542 1671 100 224 3.31e-16 84.3
Msa0100560 AT1G76710.1 35.385 130 79 2 1542 1671 100 224 3.31e-16 84.3
Msa0100560 AT1G76710.4 35.385 130 79 2 1542 1671 100 224 4.23e-16 84.0
Msa0100560 AT1G76710.3 36.641 131 76 3 1542 1671 100 224 5.07e-16 84.0
Msa0100560 AT2G44150.1 32.353 136 82 3 1542 1675 127 254 6.00e-16 82.0
Msa0100560 AT3G59960.3 32.353 136 82 3 1542 1675 122 249 6.94e-16 80.5
Msa0100560 AT3G59960.2 32.353 136 82 3 1542 1675 122 249 6.94e-16 80.5
Msa0100560 AT3G59960.4 32.353 136 82 3 1542 1675 122 249 6.94e-16 80.5
Msa0100560 AT2G23380.2 33.071 127 79 1 1527 1653 521 641 1.28e-15 83.2
Msa0100560 AT3G59960.1 32.353 136 82 3 1542 1675 122 249 1.66e-15 80.1
Msa0100560 AT2G23380.1 33.071 127 79 1 1527 1653 748 868 1.68e-15 83.2
Msa0100560 AT4G02020.1 31.707 123 78 1 1531 1653 707 823 3.03e-14 79.0
Msa0100560 AT2G35160.2 31.410 156 83 5 1533 1675 649 793 5.81e-13 74.7
Msa0100560 AT2G35160.3 31.410 156 83 5 1533 1675 649 793 5.81e-13 74.7
Msa0100560 AT2G35160.1 31.410 156 83 5 1533 1675 649 793 5.81e-13 74.7
Msa0100560 AT2G35160.4 31.410 156 83 5 1533 1675 649 793 5.81e-13 74.7
Msa0100560 AT2G35160.5 31.410 156 83 5 1533 1675 613 757 6.73e-13 74.3

Find 390 sgRNAs with CRISPR-Local

Find 1003 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCTGAATATAGAAATTT+TGG 0.126169 1_3:+7018166 None:intergenic
AACCCAAATGCCAAATATTT+TGG 0.137329 1_3:-7019797 Msa0100560:CDS
AACAATGTTGGCACTGAAAT+TGG 0.180513 1_3:-7022261 Msa0100560:CDS
CATTGAAATTTCCCCAAAAT+AGG 0.186323 1_3:-7024110 Msa0100560:CDS
TCTGCATACTCCAAAATATT+TGG 0.193459 1_3:+7019787 None:intergenic
ACCGGAATTCAATAAATATT+TGG 0.195393 1_3:-7024664 Msa0100560:CDS
CACTAACTATTATATGATTT+TGG 0.197475 1_3:+7021578 None:intergenic
GTAAATCAGTTCATGGAATT+TGG 0.199649 1_3:-7024579 Msa0100560:CDS
AAACCTTTGAACAGAATTAT+TGG 0.216743 1_3:-7021949 Msa0100560:CDS
TTCTGCTCCCGTTGTTTATC+AGG 0.217186 1_3:-7021875 Msa0100560:CDS
GATATCTGCTTAGCATTATT+AGG 0.244058 1_3:+7021097 None:intergenic
CTCCAAAATATTTGGCATTT+GGG 0.247075 1_3:+7019795 None:intergenic
ATGAAATCGTTGTATGAAAA+AGG 0.247392 1_3:-7014825 Msa0100560:three_prime_UTR
TCTGGCATGGTTGATCATTT+AGG 0.257677 1_3:+7021656 None:intergenic
GCTTAGATAACTCCGGCATC+TGG 0.266215 1_3:+7024250 None:intergenic
CCGGATGCTTCATGGCTTCC+TGG 0.269512 1_3:-7021478 Msa0100560:CDS
GTACCTGAGCTGGGTTCTTC+TGG 0.270404 1_3:-7024138 Msa0100560:CDS
GAATACGATACTGTGCAATT+TGG 0.270422 1_3:-7024747 Msa0100560:CDS
CGAAACAATCACTTGACTTT+GGG 0.271593 1_3:-7024417 Msa0100560:CDS
GAAAAGTATGCAGATGTTAA+TGG 0.273114 1_3:-7022216 Msa0100560:CDS
ACTCCAAAATATTTGGCATT+TGG 0.273364 1_3:+7019794 None:intergenic
AATCTTGTTGTATACAAATC+TGG 0.275928 1_3:-7016580 Msa0100560:CDS
TCCAAATATTTATTGAATTC+CGG 0.276336 1_3:+7024663 None:intergenic
AACTGTTGGATTCTTTGATT+TGG 0.282035 1_3:-7021615 Msa0100560:CDS
CTCCAGTACTTGTACCATTC+TGG 0.283581 1_3:+7021434 None:intergenic
ATATCATCTTCTAGCATAAA+AGG 0.284958 1_3:-7021079 Msa0100560:CDS
TCATATGCAGACTGATATTC+AGG 0.287377 1_3:+7018479 None:intergenic
CTACGAGTCAGAATCAAATT+TGG 0.296383 1_3:-7021230 Msa0100560:CDS
TCAACTGTTCATCCGGAATA+AGG 0.303248 1_3:+7018236 None:intergenic
AAGCCTTGTATATATAGTTC+TGG 0.303251 1_3:+7024163 None:intergenic
GAGAGTCTGTGATTAGTATT+AGG 0.303602 1_3:+7021319 None:intergenic
ATTGAAATTTCCCCAAAATA+GGG 0.306585 1_3:-7024109 Msa0100560:CDS
TACATCCAGACATATAGTTT+TGG 0.307892 1_3:+7024931 None:intergenic
TGGGACCATACTACATCTTT+TGG 0.308249 1_3:+7020931 None:intergenic
AAGCTTTGCACTTCTGCAAT+TGG 0.317307 1_3:-7027117 Msa0100560:five_prime_UTR
TCCTGTACCAAAGTAAATTC+TGG 0.317672 1_3:-7024609 Msa0100560:CDS
CATCTTCTTCTAAGCAATAC+TGG 0.318751 1_3:-7026640 Msa0100560:CDS
GTAGTAGTGTGTGGAAAGTA+TGG 0.325835 1_3:-7021034 Msa0100560:CDS
GCAACAACAGGGTATTAATA+TGG 0.325996 1_3:-7024316 Msa0100560:CDS
CTTTACATGGGCAAAAGTTC+AGG 0.326846 1_3:-7014884 Msa0100560:three_prime_UTR
AATCAAAAGCTAGGGAATTC+AGG 0.329162 1_3:-7024198 Msa0100560:CDS
ACTTCTTTGCCAACATTTCC+AGG 0.330771 1_3:-7026944 Msa0100560:CDS
ACAACACCAACGACCTCGTT+CGG 0.331088 1_3:+7019368 None:intergenic
ATTTGTGTAGACTGGGTAAT+TGG 0.332320 1_3:+7025360 None:intergenic
GATGCTTTAGATTATATCTT+CGG 0.336184 1_3:-7025814 Msa0100560:intron
CCTGAACCTTTAGGCTTCTC+TGG 0.336485 1_3:+7027875 None:intergenic
GGGCATAGCTGTACAAAATC+TGG 0.336994 1_3:-7020842 Msa0100560:CDS
TTTCTCAAATATTCTGAATT+CGG 0.337563 1_3:-7025697 Msa0100560:CDS
GAAACAAGTGCCGCGTTTGC+AGG 0.340117 1_3:-7021721 Msa0100560:CDS
CCGGATAGTGAAATCTAATA+TGG 0.342024 1_3:-7025484 Msa0100560:CDS
AGCTGTACTCCAGTTGTTAA+TGG 0.343064 1_3:-7024525 Msa0100560:CDS
AATAATTCTGTTCAAAGGTT+TGG 0.344239 1_3:+7021951 None:intergenic
AATAAATTACCTGAACCTTT+AGG 0.346620 1_3:+7027866 None:intergenic
GGGACAGCTGTTCCATTTGT+AGG 0.348959 1_3:-7024396 Msa0100560:CDS
TATTAACTACAGACCTTAGC+AGG 0.349179 1_3:-7025007 Msa0100560:CDS
TCAATACAACCAGCATTTGT+AGG 0.349299 1_3:+7021808 None:intergenic
CAATCAGATGTATATTTGTT+AGG 0.349569 1_3:-7022321 Msa0100560:CDS
AGAGAGATTGAATACATATC+TGG 0.350649 1_3:-7016380 Msa0100560:CDS
CAAGAATTCCGGATGCTTCA+TGG 0.354038 1_3:-7021486 Msa0100560:CDS
AGTTGAGCTCCAACGAAGTT+TGG 0.354502 1_3:+7025444 None:intergenic
CCTTGTTAGATGATCTTTGC+TGG 0.355215 1_3:+7021356 None:intergenic
TCCTACTTCACTGCAACAAC+AGG 0.356593 1_3:-7024328 Msa0100560:CDS
TTGTAAAGGTGTTGGTGTTA+AGG 0.357345 1_3:+7023884 None:intergenic
TATGGAAGATGTGGGCTTCA+TGG 0.359787 1_3:-7018509 Msa0100560:CDS
ACACATGTTGCCTCTTTACA+TGG 0.361716 1_3:-7014897 Msa0100560:three_prime_UTR
GAGAAATGAGGCAAGAATTC+CGG 0.362497 1_3:-7021497 Msa0100560:CDS
CCTCAGTTTCATTTAGCAAC+AGG 0.365354 1_3:+7018558 None:intergenic
AACAAGCTCCAATGTTTCTA+TGG 0.366763 1_3:-7020768 Msa0100560:CDS
TTTCTGCTCTTAACCTTCAA+TGG 0.376239 1_3:+7020653 None:intergenic
TTGGTTGTTGAAAATACTTC+TGG 0.378080 1_3:+7025768 None:intergenic
AGCTTTGCACTTCTGCAATT+GGG 0.378112 1_3:-7027116 Msa0100560:five_prime_UTR
TGAGAACTAAATTGTGGAAA+TGG 0.378747 1_3:+7024840 None:intergenic
AAATATTTGGACAATGATAA+TGG 0.379514 1_3:-7024651 Msa0100560:CDS
CCAAACAAACTCAAAAGATA+TGG 0.379946 1_3:-7019337 Msa0100560:intron
GCAGAGTGATATTGTCTATA+GGG 0.384496 1_3:-7020684 Msa0100560:CDS
CTTCTGTGAGTGGGTGTCCT+CGG 0.386155 1_3:-7026778 Msa0100560:CDS
TGCATCAGGGAATGCAGTTT+CGG 0.386370 1_3:+7025162 None:intergenic
CACTATTAGTCATCTGCATC+AGG 0.388914 1_3:+7025148 None:intergenic
GATTTAACTTCTGATTTCTT+CGG 0.391004 1_3:-7021154 Msa0100560:CDS
ATTTATTCCGGGGCAATTGT+TGG 0.392152 1_3:-7026989 Msa0100560:CDS
AAGCCTAAGCTCAATGTTAG+AGG 0.393974 1_3:+7025257 None:intergenic
ACGAAACAATCACTTGACTT+TGG 0.394674 1_3:-7024418 Msa0100560:CDS
GGAATGCAGTTTCGGAGAAC+TGG 0.396137 1_3:+7025170 None:intergenic
TAGGCTTGGTCAACCACCTT+GGG 0.396471 1_3:-7025241 Msa0100560:CDS
ATTTCTTCAGATAAACTAGA+AGG 0.400269 1_3:+7021400 None:intergenic
GGAAGGCAATCAAATGAATC+TGG 0.401204 1_3:-7024687 Msa0100560:CDS
TTTAACAATTTAACGACTCA+TGG 0.402312 1_3:+7014961 None:intergenic
CTTTCCTTGATTCTCTGAAA+AGG 0.402762 1_3:-7025395 Msa0100560:CDS
TCTTGTTTATTAGGTGCATC+AGG 0.403906 1_3:-7019415 Msa0100560:intron
TGACCATCCTCGTTTGATAT+CGG 0.404167 1_3:+7025570 None:intergenic
CTTTCTGTTGTGTTTGTCAA+AGG 0.404264 1_3:-7019561 Msa0100560:CDS
TCAGATGAGGAAGAGATTCC+AGG 0.405073 1_3:+7021460 None:intergenic
CGGATGAACAGTTGAATGCT+TGG 0.406715 1_3:-7018228 Msa0100560:CDS
CCAGAGAAGCCTAAAGGTTC+AGG 0.407435 1_3:-7027875 Msa0100560:intron
TCCTACGATCTTCAAAATGA+TGG 0.408397 1_3:-7023831 Msa0100560:CDS
GCGGAGTTTCACACGTTACC+TGG 0.410198 1_3:-7021205 Msa0100560:CDS
TATATCTTTCCATTAACAAC+TGG 0.410759 1_3:+7024516 None:intergenic
TCATAACCTGCTAAGTCTCT+TGG 0.410883 1_3:-7027026 Msa0100560:CDS
TTGTTGGAATTTGTGTAGAC+TGG 0.412802 1_3:+7025352 None:intergenic
CAACACCAACGACCTCGTTC+GGG 0.415229 1_3:+7019369 None:intergenic
TCGGGGTGTATGCCTTATTC+CGG 0.415632 1_3:-7018248 Msa0100560:CDS
GAATCAAGGAAAGGAGGTAT+AGG 0.415979 1_3:+7025405 None:intergenic
TTCTTTATTCTAGAAATTCC+AGG 0.416453 1_3:+7021187 None:intergenic
ATTTGAAGTAAATCAGTTCA+TGG 0.417266 1_3:-7024586 Msa0100560:CDS
TCCCTTGCCCTCTCACTGCC+TGG 0.417413 1_3:+7026926 None:intergenic
GAATTAATGAAGGACATGTT+TGG 0.419978 1_3:+7019589 None:intergenic
ATGCCCCAAAACTATATGTC+TGG 0.420936 1_3:-7024936 Msa0100560:CDS
ATGCTTTAGATTATATCTTC+GGG 0.421373 1_3:-7025813 Msa0100560:intron
GATGGTTTCCTGATCTTGCT+TGG 0.422306 1_3:+7022051 None:intergenic
CCTTGATGATATTAAACTGT+TGG 0.425100 1_3:-7021629 Msa0100560:CDS
ATTTGTTAACCATTCATGTC+TGG 0.426025 1_3:-7016267 Msa0100560:intron
ATTCGGCTACAGTCACATTA+AGG 0.427518 1_3:-7025680 Msa0100560:CDS
CTGTTAAGTTCACCATTGAT+TGG 0.428304 1_3:+7019538 None:intergenic
GTTGTGGCAGTGTAATTTCC+TGG 0.428542 1_3:-7027154 Msa0100560:intron
AGCCTTGTATATATAGTTCT+GGG 0.429167 1_3:+7024164 None:intergenic
TTTATTCCGGGGCAATTGTT+GGG 0.429343 1_3:-7026988 Msa0100560:CDS
GAAAGACTCTTTCCTACAAA+TGG 0.431689 1_3:+7024384 None:intergenic
GGCAGAGTGATATTGTCTAT+AGG 0.432504 1_3:-7020685 Msa0100560:CDS
ATTCTTTGATTTGGAAGAAA+AGG 0.433421 1_3:-7021606 Msa0100560:CDS
GCGTTTGCAGGCTCAACCAT+TGG 0.435118 1_3:-7021709 Msa0100560:CDS
AATAAACAAAATCCACAGTT+AGG 0.436498 1_3:+7025026 None:intergenic
GATTCTACAAACGAATCAAC+TGG 0.438066 1_3:+7025210 None:intergenic
ACAAGCATTTGTTGTCCACT+TGG 0.438981 1_3:+7024815 None:intergenic
TTGAAATTTCCCCAAAATAG+GGG 0.439357 1_3:-7024108 Msa0100560:CDS
TCCAGAATTTACTTTGGTAC+AGG 0.440270 1_3:+7024608 None:intergenic
AATATCACTCTGCCATTCAT+TGG 0.441495 1_3:+7020694 None:intergenic
ATCTGGTATTGTTCATTCCA+AGG 0.443231 1_3:+7022367 None:intergenic
CTTCGGGAAATGAGAGTGAA+TGG 0.443499 1_3:-7025797 Msa0100560:CDS
TTGGAGTATGCAGAAGATCA+TGG 0.443631 1_3:-7019778 Msa0100560:CDS
TTCTGTGAGTGGGTGTCCTC+GGG 0.444083 1_3:-7026777 Msa0100560:CDS
TTGCAAACTATTGTGTCTAC+AGG 0.444344 1_3:+7020794 None:intergenic
CGTTTGCAGGCTCAACCATT+GGG 0.444967 1_3:-7021708 Msa0100560:CDS
GTCTGGGTGTTTCAATCGGT+GGG 0.445818 1_3:+7020912 None:intergenic
TGGTGAACTTAACAGTTCAT+TGG 0.446499 1_3:-7019530 Msa0100560:CDS
GCGAAGCTCGATGGATGAAA+TGG 0.447954 1_3:+7027919 None:intergenic
GTGTCCTCGGGTCTTCTGCA+TGG 0.448234 1_3:-7026765 Msa0100560:CDS
AACTTCCAAAAGATGTAGTA+TGG 0.449250 1_3:-7020936 Msa0100560:CDS
TTGGTTCTTCTAATGTTGAC+TGG 0.450794 1_3:-7024728 Msa0100560:CDS
AGCTCCAATGTTTCTATGGA+AGG 0.451013 1_3:-7020764 Msa0100560:CDS
TACTTCTCAGTGCATACATA+GGG 0.453695 1_3:-7016536 Msa0100560:CDS
ATCTTTGCTGGCTAGTTGAA+TGG 0.454245 1_3:+7021368 None:intergenic
TGTGTTACAAGCCCTGCTTC+CGG 0.454630 1_3:-7026878 Msa0100560:CDS
TATGCAATCGACATCAAAAT+CGG 0.455171 1_3:-7026834 Msa0100560:CDS
AGATGTGGGCTTCATGGTAT+TGG 0.455521 1_3:-7018503 Msa0100560:CDS
CAATCACCTCACCTCAAATA+CGG 0.456220 1_3:+7023807 None:intergenic
GAGGGGTCAGGAATTGATAA+AGG 0.460017 1_3:-7021769 Msa0100560:CDS
ACCTTTACAATCTAAACAAA+AGG 0.460217 1_3:-7023871 Msa0100560:CDS
TCTATCAGAAGAACTATTGA+TGG 0.462718 1_3:-7024555 Msa0100560:CDS
TAATAGATGCCACGAGGAAG+GGG 0.462743 1_3:-7016301 Msa0100560:CDS
CCATATTAGATTTCACTATC+CGG 0.464205 1_3:+7025484 None:intergenic
TAGGGCTGATTCTCCATTGA+AGG 0.465160 1_3:-7020666 Msa0100560:CDS
GGGTTACAAGGGCCGTAGAT+TGG 0.466374 1_3:-7018308 Msa0100560:CDS
AATTAATGAAGGACATGTTT+GGG 0.466803 1_3:+7019590 None:intergenic
AAAATGATGGGCCGTATTTG+AGG 0.467489 1_3:-7023818 Msa0100560:intron
CTTCCTCTAACATTGAGCTT+AGG 0.468269 1_3:-7025260 Msa0100560:CDS
CTAAGCAATACTGGGCATCT+TGG 0.469019 1_3:-7026631 Msa0100560:CDS
TTCAAATCCAGAATTTACTT+TGG 0.469198 1_3:+7024602 None:intergenic
ATCCAATCCAATCCGATCCC+AGG 0.469563 1_3:-7027984 Msa0100560:five_prime_UTR
TTGCAGTGCCTTAAAACCTC+GGG 0.470496 1_3:-7018266 Msa0100560:CDS
CTCTCACTGCCTGGAAATGT+TGG 0.472729 1_3:+7026935 None:intergenic
AGGTCTGCATCAGCATTCTT+CGG 0.473114 1_3:+7025627 None:intergenic
ATAATAGATGCCACGAGGAA+GGG 0.473392 1_3:-7016302 Msa0100560:CDS
ATTAATGAAATCACTGCTAA+AGG 0.473536 1_3:-7020611 Msa0100560:intron
ATCTTGTTGTATACAAATCT+GGG 0.473753 1_3:-7016579 Msa0100560:CDS
CAAGCATTCAACTGTTCATC+CGG 0.474932 1_3:+7018229 None:intergenic
TGTTTAGATTGTAAAGGTGT+TGG 0.476065 1_3:+7023876 None:intergenic
TTGGGGCATTTCGAATGAAC+GGG 0.476764 1_3:+7024950 None:intergenic
GTATTCAGAATGCAGGTTCA+TGG 0.477072 1_3:+7024764 None:intergenic
AACCAGAATGGTACAAGTAC+TGG 0.482349 1_3:-7021436 Msa0100560:CDS
CTCTGTGATGGAGGCGAACA+AGG 0.483268 1_3:-7021851 Msa0100560:CDS
GTTAGTCTGGGTGTTTCAAT+CGG 0.483855 1_3:+7020908 None:intergenic
ATCTGGTTTAAAAGCTAAGA+AGG 0.483859 1_3:-7020825 Msa0100560:CDS
TTTCTAGAATAAAGAAATCA+AGG 0.485420 1_3:-7021180 Msa0100560:CDS
AAAACGAAATGGAGGAGATT+GGG 0.486378 1_3:-7020881 Msa0100560:CDS
AAATGGAGGAGATTGGGCTT+TGG 0.486766 1_3:-7020875 Msa0100560:CDS
CCCTGTTGTTGCAGTGAAGT+AGG 0.487152 1_3:+7024327 None:intergenic
ATTGGGAATGCTGTTGGCCA+TGG 0.488214 1_3:-7027099 Msa0100560:five_prime_UTR
CTTGGTCAACCACCTTGGGC+TGG 0.488975 1_3:-7025237 Msa0100560:CDS
CTTGGCACATCTCTCCATTG+AGG 0.489347 1_3:+7022069 None:intergenic
TTCGTTCCAGAGAAGCCTAA+AGG 0.490082 1_3:-7027881 Msa0100560:five_prime_UTR
CAAGCATTTGTTGTCCACTT+GGG 0.491235 1_3:+7024816 None:intergenic
GATGGGCAGTCGAGAGGAAA+AGG 0.493929 1_3:-7018444 Msa0100560:CDS
GCAATTCCTCCTCCCTGCTA+AGG 0.494795 1_3:+7024994 None:intergenic
CATGATATGAATCAAAAGCT+AGG 0.495731 1_3:-7024207 Msa0100560:CDS
TACTGTCAGGCGTCTGAAGA+AGG 0.497090 1_3:-7015918 Msa0100560:intron
GAGATGTGCCAAGCAAGATC+AGG 0.497315 1_3:-7022059 Msa0100560:CDS
AATGATAATGGTGAAAGGTT+TGG 0.498943 1_3:-7024639 Msa0100560:CDS
GTCTATCTTAAAGAAGTAGC+AGG 0.500696 1_3:+7016334 None:intergenic
TTCCAGGCAGTGAGAGGGCA+AGG 0.500888 1_3:-7026928 Msa0100560:CDS
TGAAAACCCTGGGATCGGAT+TGG 0.501455 1_3:+7027977 None:intergenic
CAAGGCTTCAGTACCTGAGC+TGG 0.501662 1_3:-7024148 Msa0100560:CDS
TGTTTATCAGGCCTCTGTGA+TGG 0.502285 1_3:-7021863 Msa0100560:CDS
ATACTTCTCAGTGCATACAT+AGG 0.502470 1_3:-7016537 Msa0100560:CDS
AAATCTGGGATACATGGCCT+TGG 0.504047 1_3:-7016565 Msa0100560:CDS
AGATATTGAGCGTGATCCTC+GGG 0.504167 1_3:-7018149 Msa0100560:intron
TCTAACATTGAGCTTAGGCT+TGG 0.505592 1_3:-7025255 Msa0100560:CDS
CCAGGAAGCCATGAAGCATC+CGG 0.508201 1_3:+7021478 None:intergenic
TGTCCTCGGGTCTTCTGCAT+GGG 0.509880 1_3:-7026764 Msa0100560:CDS
GCTTGCATTGACCCAGATGC+CGG 0.510044 1_3:-7024262 Msa0100560:CDS
ATGGCTCTCATACACCTCAA+TGG 0.512042 1_3:-7022083 Msa0100560:CDS
CCATGAGAATCTAATCCACT+TGG 0.512056 1_3:+7022117 None:intergenic
ACAGAGGCCTGATAAACAAC+GGG 0.512502 1_3:+7021868 None:intergenic
TGCAGAGCTTGAAACAAGAT+AGG 0.512525 1_3:+7024362 None:intergenic
CAGATGGCTACTGTATTTGA+AGG 0.512554 1_3:-7022006 Msa0100560:CDS
TTTGTAGGTTGTCTTCTTTG+CGG 0.513532 1_3:-7015122 Msa0100560:intron
TTAACAATTTAACGACTCAT+GGG 0.514538 1_3:+7014962 None:intergenic
AAAACCTTCCATAGAAACAT+TGG 0.515048 1_3:+7020760 None:intergenic
TTAGGCTTGGTCAACCACCT+TGG 0.515609 1_3:-7025242 Msa0100560:CDS
GGAAGCCTTGTTGAAAGAGC+AGG 0.515818 1_3:-7021923 Msa0100560:CDS
CGGCAAAAGTGATTACTGTC+AGG 0.515921 1_3:-7015931 Msa0100560:CDS
CTTAGATAACTCCGGCATCT+GGG 0.516031 1_3:+7024251 None:intergenic
GGGGCAATTGTTGGGATGAG+TGG 0.517226 1_3:-7026980 Msa0100560:CDS
AACAAAATCCACAGTTAGGA+GGG 0.517899 1_3:+7025030 None:intergenic
ACTGTAGATCCTACAAATGC+TGG 0.518483 1_3:-7021817 Msa0100560:CDS
CATATCAGATGCAGATGCAC+TGG 0.519681 1_3:+7025731 None:intergenic
GTATACAAATCTGGGATACA+TGG 0.519890 1_3:-7016571 Msa0100560:CDS
GGTTGTCTTCTTTGCGGAGA+GGG 0.519995 1_3:-7015116 Msa0100560:CDS
CAGATATTGAGCGTGATCCT+CGG 0.522527 1_3:-7018150 Msa0100560:CDS
TATAATAGATGCCACGAGGA+AGG 0.523300 1_3:-7016303 Msa0100560:CDS
ATTGCAGAAGTGCAAAGCTT+CGG 0.523417 1_3:+7027120 None:intergenic
CTCTGAAGCTATCTTAAAAG+AGG 0.523656 1_3:+7022188 None:intergenic
GAGGTGCTCATAGAATCAAA+AGG 0.524009 1_3:-7021057 Msa0100560:CDS
GTACCAATAATTCTGTTCAA+AGG 0.525182 1_3:+7021946 None:intergenic
TTTGATTTGGAAGAAAAGGC+AGG 0.525247 1_3:-7021602 Msa0100560:CDS
TATTCAGAATGCAGGTTCAT+GGG 0.526274 1_3:+7024765 None:intergenic
AGTCTGGGTGTTTCAATCGG+TGG 0.526784 1_3:+7020911 None:intergenic
GGTACAAACAAGTGAAGGGC+TGG 0.527127 1_3:-7016606 Msa0100560:CDS
TGCTTGGTACAAACAAGTGA+AGG 0.529013 1_3:-7016611 Msa0100560:CDS
TCTGCAATTGGGAATGCTGT+TGG 0.529034 1_3:-7027105 Msa0100560:five_prime_UTR
GTGCATACATAGGGGTAGAA+TGG 0.529069 1_3:-7016527 Msa0100560:intron
TTACAAGAGGGAAATTCAGA+TGG 0.529138 1_3:+7021289 None:intergenic
GTTGGAGCTCAACTGAATGA+TGG 0.531029 1_3:-7025435 Msa0100560:CDS
GAAAGCGCGAGGATACAAAC+AGG 0.532321 1_3:-7027061 Msa0100560:five_prime_UTR
ATTTGCAGAAAGAATATGCT+TGG 0.532586 1_3:-7016627 Msa0100560:intron
AAGTTTCCAAGAGACTTAGC+AGG 0.533399 1_3:+7027020 None:intergenic
ACACCTGCACCAAACTTCGT+TGG 0.534294 1_3:-7025453 Msa0100560:CDS
GAAAGAGTGTATGTGTGTAG+TGG 0.534599 1_3:+7028033 None:intergenic
AATGTAAAGACTGGTCTACT+AGG 0.534906 1_3:-7025294 Msa0100560:CDS
TGGAGTATGCAGAAGATCAT+GGG 0.536565 1_3:-7019777 Msa0100560:CDS
TAGGTGCATCAGGCTTGCTA+TGG 0.537489 1_3:-7019405 Msa0100560:CDS
AAACAAAATCCACAGTTAGG+AGG 0.538456 1_3:+7025029 None:intergenic
TAGTAGTGTGTGGAAAGTAT+GGG 0.539545 1_3:-7021033 Msa0100560:CDS
AAAGAGTGTATGTGTGTAGT+GGG 0.542100 1_3:+7028034 None:intergenic
TGTTGTTGCTTAGATAACTC+CGG 0.544189 1_3:+7024243 None:intergenic
AATTGTTGCAGAAACAATGT+TGG 0.546666 1_3:-7022273 Msa0100560:CDS
AGAAGAACTATTGATGGTAG+TGG 0.546718 1_3:-7024549 Msa0100560:CDS
ATAGTAATGGTCACAAAGGA+AGG 0.546789 1_3:-7024704 Msa0100560:CDS
AGAAGAAAGATACCAATGAA+TGG 0.546895 1_3:-7020706 Msa0100560:CDS
TTCGGGAAATGAGAGTGAAT+GGG 0.546929 1_3:-7025796 Msa0100560:CDS
TTATTAGGTTCCTCATGTGA+TGG 0.547192 1_3:+7021112 None:intergenic
TAGAATAAAGAAATCAAGGA+AGG 0.547708 1_3:-7021176 Msa0100560:CDS
GGTCAGGAATTGATAAAGGC+TGG 0.548166 1_3:-7021765 Msa0100560:CDS
TAATATCATCAAGGAGACTC+TGG 0.551150 1_3:+7021638 None:intergenic
GAAAGAAACTGAATTAATGA+AGG 0.553022 1_3:+7019579 None:intergenic
TTTGGGGCATTTCGAATGAA+CGG 0.554615 1_3:+7024949 None:intergenic
AAAGCGTTTAAACCTTTGAG+TGG 0.554944 1_3:+7025540 None:intergenic
TGGACAATGATAATGGTGAA+AGG 0.555155 1_3:-7024644 Msa0100560:CDS
TTGGGTTGAGAACTAAATTG+TGG 0.555213 1_3:+7024834 None:intergenic
ATGATATGAATCAAAAGCTA+GGG 0.555241 1_3:-7024206 Msa0100560:CDS
GAGAAACTTGTGCGTGACGA+GGG 0.556893 1_3:-7021787 Msa0100560:CDS
CAGTATCGTATTCAGAATGC+AGG 0.560586 1_3:+7024757 None:intergenic
GCTCCAACGAAGTTTGGTGC+AGG 0.560767 1_3:+7025450 None:intergenic
GAAATGAGAGTGAATGGGAC+TGG 0.560854 1_3:-7025791 Msa0100560:CDS
GAGATTGAAAACCCTGGGAT+CGG 0.560860 1_3:+7027972 None:intergenic
ATCTTCTTCTAAGCAATACT+GGG 0.561105 1_3:-7026639 Msa0100560:CDS
GCTTCGGATCAGACAACTCC+AGG 0.561736 1_3:+7027136 None:intergenic
TGTATGACCAGGTGAAAAGC+CGG 0.561768 1_3:-7025503 Msa0100560:CDS
AATGTTGACTGGAATAGTAA+TGG 0.561816 1_3:-7024717 Msa0100560:CDS
GCAATCAAATGAATCTGGAC+CGG 0.562031 1_3:-7024682 Msa0100560:CDS
CAGTATTGCTTAGAAGAAGA+TGG 0.562034 1_3:+7026641 None:intergenic
CAAGTGATTGTTTCGTCCAG+AGG 0.562513 1_3:+7024425 None:intergenic
ACCCTGGGATCGGATTGGAT+TGG 0.562628 1_3:+7027982 None:intergenic
GAAACAATCACTTGACTTTG+GGG 0.562957 1_3:-7024416 Msa0100560:CDS
CTTGTGCGTGACGAGGGGTC+AGG 0.563215 1_3:-7021781 Msa0100560:CDS
AGGTGCTCATAGAATCAAAA+GGG 0.564699 1_3:-7021056 Msa0100560:CDS
AGTAATATACCAGACATGAA+TGG 0.565353 1_3:+7016258 None:intergenic
ACCATTCTGGTTATCAGATG+AGG 0.565923 1_3:+7021447 None:intergenic
TATAGACATCATCCAATCTA+CGG 0.567170 1_3:+7018296 None:intergenic
TGAAATTGTGGGACAACGTA+TGG 0.570078 1_3:-7016411 Msa0100560:CDS
GTCACGAGATTGAAAACCCT+GGG 0.570341 1_3:+7027967 None:intergenic
GCATGATTGATCAAAATACA+AGG 0.570988 1_3:-7024287 Msa0100560:CDS
TCCTCATCTGATAACCAGAA+TGG 0.571021 1_3:-7021448 Msa0100560:CDS
CCAACAGTTTAATATCATCA+AGG 0.571519 1_3:+7021629 None:intergenic
CACATGTTGCCTCTTTACAT+GGG 0.571645 1_3:-7014896 Msa0100560:three_prime_UTR
AATAGATGCCACGAGGAAGG+GGG 0.572024 1_3:-7016300 Msa0100560:CDS
GTGTAGTGGGAGTGAAATGA+TGG 0.572890 1_3:+7028047 None:intergenic
TGAAGCGTGGCGAAGCTCGA+TGG 0.573310 1_3:+7027910 None:intergenic
TGTTGGAATTTGTGTAGACT+GGG 0.575296 1_3:+7025353 None:intergenic
GCACCAGAAGAACCCAGCTC+AGG 0.575638 1_3:+7024135 None:intergenic
TGAAATTTCCCCAAAATAGG+GGG 0.576425 1_3:-7024107 Msa0100560:CDS
ATTGCAGTGCCTTAAAACCT+CGG 0.577811 1_3:-7018267 Msa0100560:CDS
CCAAGTGGATTAGATTCTCA+TGG 0.578872 1_3:-7022117 Msa0100560:CDS
CCTACGATCTTCAAAATGAT+GGG 0.579211 1_3:-7023830 Msa0100560:CDS
ATCAAAAGGGTAGTAGTGTG+TGG 0.580500 1_3:-7021043 Msa0100560:CDS
TCCAATCCAATCCGATCCCA+GGG 0.580631 1_3:-7027983 Msa0100560:five_prime_UTR
GTCAGAATCAAATTTGGATG+CGG 0.581124 1_3:-7021224 Msa0100560:CDS
TTTAGACGATTCTTACAAGA+GGG 0.584924 1_3:+7021277 None:intergenic
CGACTGCCCATCACATCGGT+AGG 0.585745 1_3:+7018455 None:intergenic
AAAATCCTGCTCTTTCAACA+AGG 0.585866 1_3:+7021918 None:intergenic
GCACCCACGGATGTATCTGA+TGG 0.586665 1_3:+7024480 None:intergenic
TAGCAAAGCATTTGCACCCA+CGG 0.587424 1_3:+7024467 None:intergenic
ACTGGATTTCATCAGATGGT+TGG 0.588629 1_3:+7025749 None:intergenic
GCGGAGAGGGATATATTACC+TGG 0.589801 1_3:-7015103 Msa0100560:CDS
ATAGATGCCACGAGGAAGGG+GGG 0.589834 1_3:-7016299 Msa0100560:CDS
CATTACCCGAACGAGGTCGT+TGG 0.590989 1_3:-7019374 Msa0100560:CDS
GTTTGTCAAAGGCCAATCAA+TGG 0.591085 1_3:-7019550 Msa0100560:CDS
CTATAGGTTGTAGAGTATGT+CGG 0.591934 1_3:-7016434 Msa0100560:intron
CGATGTGATGGGCAGTCGAG+AGG 0.592977 1_3:-7018450 Msa0100560:CDS
AATGGTTGAGCCTGCAAACG+CGG 0.593840 1_3:+7021711 None:intergenic
GGTCACAATATTCCACTCAA+AGG 0.593908 1_3:-7025552 Msa0100560:CDS
TTTGAACAGAATTATTGGTA+CGG 0.594379 1_3:-7021944 Msa0100560:CDS
AAAAGGAATTTACCTGTGCT+AGG 0.595200 1_3:-7018427 Msa0100560:CDS
GCAATTGTTGGGATGAGTGG+TGG 0.596073 1_3:-7026977 Msa0100560:CDS
ATGCACTGGATTTCATCAGA+TGG 0.596333 1_3:+7025745 None:intergenic
TAGATGCCACGAGGAAGGGG+GGG 0.597075 1_3:-7016298 Msa0100560:CDS
CAACATTTCCAGGCAGTGAG+AGG 0.597371 1_3:-7026934 Msa0100560:CDS
TTTAAGATAGCTTCAGAGTG+TGG 0.598308 1_3:-7022183 Msa0100560:CDS
TTCAGAGAATCAAGGAAAGG+AGG 0.600669 1_3:+7025399 None:intergenic
ATATGATCCTACCGATGTGA+TGG 0.602131 1_3:-7018462 Msa0100560:CDS
TTATCAGGCCTCTGTGATGG+AGG 0.602966 1_3:-7021860 Msa0100560:CDS
GGACAAGACAGTGCTCAAGC+GGG 0.603794 1_3:-7021985 Msa0100560:CDS
TGAGAAACTTGTGCGTGACG+AGG 0.604676 1_3:-7021788 Msa0100560:CDS
ATCTGCATCTGATATGTCGA+AGG 0.605512 1_3:-7025724 Msa0100560:CDS
CTCTCGACTGCCCATCACAT+CGG 0.606504 1_3:+7018451 None:intergenic
TACAGACCTTAGCAGGGAGG+AGG 0.606666 1_3:-7025000 Msa0100560:CDS
AGGACAAGACAGTGCTCAAG+CGG 0.606672 1_3:-7021986 Msa0100560:CDS
CGAGGACACCCACTCACAGA+AGG 0.607472 1_3:+7026779 None:intergenic
GAGTATGTCGGTGAAATTGT+GGG 0.607546 1_3:-7016422 Msa0100560:CDS
AACATTTCCAGGCAGTGAGA+GGG 0.608987 1_3:-7026933 Msa0100560:CDS
TCTATAGAATCAACAAGCCA+TGG 0.609158 1_3:+7027082 None:intergenic
AATATCTACTTCGATCCAAG+TGG 0.609805 1_3:-7022132 Msa0100560:CDS
CATATGCAGACTGATATTCA+GGG 0.609925 1_3:+7018480 None:intergenic
ACTCATCCCAACAATTGCCC+CGG 0.610409 1_3:+7026982 None:intergenic
AAGGCTTCAGTACCTGAGCT+GGG 0.610819 1_3:-7024147 Msa0100560:CDS
ATTGCCCCGGAATAAATACC+AGG 0.611282 1_3:+7026995 None:intergenic
GAAGAAAACCCTCCTAACTG+TGG 0.613592 1_3:-7025038 Msa0100560:intron
CCAGCAAAGATCATCTAACA+AGG 0.615277 1_3:-7021356 Msa0100560:CDS
ACCCCAGAACTATATATACA+AGG 0.615455 1_3:-7024166 Msa0100560:CDS
AAATACCTCTGTCCTAGCAC+AGG 0.617950 1_3:+7018415 None:intergenic
TGTCACGAGATTGAAAACCC+TGG 0.620810 1_3:+7027966 None:intergenic
ATGCAACTCCTTCTGTGAGT+GGG 0.622176 1_3:-7026787 Msa0100560:CDS
ATTTACCTGTGCTAGGACAG+AGG 0.623104 1_3:-7018420 Msa0100560:intron
CCTGTTGCTAAATGAAACTG+AGG 0.625593 1_3:-7018558 Msa0100560:CDS
TGGAATAGTAATGGTCACAA+AGG 0.626611 1_3:-7024708 Msa0100560:CDS
TATGATCCTACCGATGTGAT+GGG 0.628689 1_3:-7018461 Msa0100560:CDS
AATTTAGTTCTCAACCCAAG+TGG 0.628903 1_3:-7024830 Msa0100560:CDS
ACTATTAGTCATCTGCATCA+GGG 0.629941 1_3:+7025149 None:intergenic
CACAGAGGCCTGATAAACAA+CGG 0.631801 1_3:+7021867 None:intergenic
TCAACTGGATCTCCAGCCCA+AGG 0.633306 1_3:+7025225 None:intergenic
AACTCAAGAACCATCACATG+AGG 0.633420 1_3:-7021122 Msa0100560:CDS
GCCTTGTATATATAGTTCTG+GGG 0.634259 1_3:+7024165 None:intergenic
GTTTAGACGATTCTTACAAG+AGG 0.635282 1_3:+7021276 None:intergenic
TCCAGGCAGTGAGAGGGCAA+GGG 0.635836 1_3:-7026927 Msa0100560:CDS
AGAAACTTGTGCGTGACGAG+GGG 0.635853 1_3:-7021786 Msa0100560:CDS
ATTAACTACAGACCTTAGCA+GGG 0.635862 1_3:-7025006 Msa0100560:CDS
AGAGTATGTCGGTGAAATTG+TGG 0.636114 1_3:-7016423 Msa0100560:CDS
CAGTTTCGGAGAACTGGCAA+AGG 0.636131 1_3:+7025176 None:intergenic
TATGCAACTCCTTCTGTGAG+TGG 0.638598 1_3:-7026788 Msa0100560:CDS
TCGTAAGTAATCTCTTCACC+AGG 0.639603 1_3:+7015085 None:intergenic
ATGTGGACAGCCAAATTGCG+CGG 0.640739 1_3:-7015951 Msa0100560:intron
GCTTGGTACAAACAAGTGAA+GGG 0.642282 1_3:-7016610 Msa0100560:CDS
AGGTTGTCTTCTTTGCGGAG+AGG 0.642304 1_3:-7015117 Msa0100560:CDS
TTTCCCATGCAGAAGACCCG+AGG 0.643639 1_3:+7026761 None:intergenic
GGGAATCTTGAGATTACTGA+TGG 0.647014 1_3:-7024078 Msa0100560:intron
AGATTGAATACATATCTGGA+AGG 0.651911 1_3:-7016376 Msa0100560:CDS
CAACCGATATCAAACGAGGA+TGG 0.654884 1_3:-7025573 Msa0100560:CDS
TTGATTCTATAGAAAGCGCG+AGG 0.655108 1_3:-7027072 Msa0100560:five_prime_UTR
GCAGAACAACCTGTATGACC+AGG 0.656398 1_3:-7025514 Msa0100560:CDS
AGTAGTGTGTGGAAAGTATG+GGG 0.657858 1_3:-7021032 Msa0100560:CDS
CTTTCCATCAGATACATCCG+TGG 0.659078 1_3:-7024484 Msa0100560:CDS
ATTAAAGCATTACCCGAACG+AGG 0.665777 1_3:-7019381 Msa0100560:CDS
CCTACTTCACTGCAACAACA+GGG 0.666698 1_3:-7024327 Msa0100560:CDS
AAAACTTGAGTATAGACATG+TGG 0.670832 1_3:+7026584 None:intergenic
GAACTGGCAAAGGTAAACAA+TGG 0.675164 1_3:+7025186 None:intergenic
GGATTGGATTGGATTCGATG+AGG 0.681215 1_3:+7027993 None:intergenic
GAACGAAGAAGATTGAAGCG+TGG 0.683627 1_3:+7027897 None:intergenic
TTTCCATCAGATACATCCGT+GGG 0.685521 1_3:-7024483 Msa0100560:CDS
TCATCAAGGAGACTCTGGCA+TGG 0.685586 1_3:+7021643 None:intergenic
TCATCTTCTAGCATAAAAGG+AGG 0.689908 1_3:-7021076 Msa0100560:CDS
TGCAGTGCCTTAAAACCTCG+GGG 0.692639 1_3:-7018265 Msa0100560:CDS
ACTTCTCAGTGCATACATAG+GGG 0.693013 1_3:-7016535 Msa0100560:CDS
GGAATAAGGCATACACCCCG+AGG 0.706711 1_3:+7018250 None:intergenic
ACTGAGAAGTATAAAGACCA+AGG 0.712200 1_3:+7016548 None:intergenic
AACTACAGACCTTAGCAGGG+AGG 0.718110 1_3:-7025003 Msa0100560:CDS
ACTGGATCTCCAGCCCAAGG+TGG 0.723247 1_3:+7025228 None:intergenic
CTGTTGCTAAATGAAACTGA+GGG 0.734590 1_3:-7018557 Msa0100560:CDS
TCTGCATCTGATATGTCGAA+GGG 0.735126 1_3:-7025723 Msa0100560:CDS
AAAACAACCGATATCAAACG+AGG 0.741482 1_3:-7025577 Msa0100560:CDS
AACATATAATAGATGCCACG+AGG 0.744332 1_3:-7016307 Msa0100560:CDS
CTTGTTCGCCTCCATCACAG+AGG 0.750388 1_3:+7021852 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTAATATTTTTTATAT+AGG + chr1_3:7024879-7024898 None:intergenic 0.0%
!! AAATAGATAAATAAAATCTT+GGG + chr1_3:7020354-7020373 None:intergenic 10.0%
!! AAAATAGATAAATAAAATCT+TGG + chr1_3:7020355-7020374 None:intergenic 10.0%
!!! TATTTTCCTTTTATTTTTAT+AGG - chr1_3:7023676-7023695 Msa0100560:intron 10.0%
!!! AATTGATTAAATTTTATCTT+GGG + chr1_3:7027646-7027665 None:intergenic 10.0%
!!! TAATTGATTAAATTTTATCT+TGG + chr1_3:7027647-7027666 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019718-7019737 None:intergenic 100.0%
!! ACATAATTATATGTAATCAT+AGG + chr1_3:7015309-7015328 None:intergenic 15.0%
!!! ATATAATTATGTTATTTGCT+TGG - chr1_3:7015317-7015336 Msa0100560:intron 15.0%
!! CATTTCAATAAAAATTGTTA+GGG + chr1_3:7015657-7015676 None:intergenic 15.0%
!! ACATTTCAATAAAAATTGTT+AGG + chr1_3:7015658-7015677 None:intergenic 15.0%
!!! TTCTATCATAAACTATATTT+TGG - chr1_3:7016472-7016491 Msa0100560:intron 15.0%
!!! TGTTTTATAATTAATAGTAG+TGG - chr1_3:7019249-7019268 Msa0100560:intron 15.0%
!!! TCTTTATTATCTTGTTTATT+AGG - chr1_3:7023440-7023459 Msa0100560:intron 15.0%
!!! ATATCTGAATATAGAAATTT+TGG + chr1_3:7024701-7024720 None:intergenic 15.0%
!!! TTTTATAATTGCATTTCATT+AGG + chr1_3:7025713-7025732 None:intergenic 15.0%
!! AATGCAATTATAAAAGAAAT+TGG - chr1_3:7025718-7025737 Msa0100560:CDS 15.0%
!! CTATATATAATTGAGTTAAA+GGG + chr1_3:7027288-7027307 None:intergenic 15.0%
!!! GATTATAGAAATGTTTTTTT+CGG - chr1_3:7027397-7027416 Msa0100560:intron 15.0%
!!! AAACATTTTGAATGATTTTA+TGG - chr1_3:7027565-7027584 Msa0100560:intron 15.0%
!!! TTTTATTGAAATGTTAATGC+TGG - chr1_3:7015664-7015683 Msa0100560:intron 20.0%
!!! AGAAGTTTATATTTTCTCTT+TGG - chr1_3:7016137-7016156 Msa0100560:intron 20.0%
!!! TACTTTATTGAGATCATTTT+CGG - chr1_3:7016331-7016350 Msa0100560:CDS 20.0%
!! TAGTTTATGATAGAACATTA+TGG + chr1_3:7016467-7016486 None:intergenic 20.0%
!! AAGTTGTATTTCTTAAAATC+TGG - chr1_3:7016612-7016631 Msa0100560:CDS 20.0%
!! AGTTGTATTTCTTAAAATCT+GGG - chr1_3:7016613-7016632 Msa0100560:CDS 20.0%
!! TTTCTCAAATATTCTGAATT+CGG - chr1_3:7017167-7017186 Msa0100560:intron 20.0%
!! AACAAATGCTTGTAAAAATT+TGG - chr1_3:7018059-7018078 Msa0100560:intron 20.0%
!! TCCAAATATTTATTGAATTC+CGG + chr1_3:7018204-7018223 None:intergenic 20.0%
!! AAATATTTGGACAATGATAA+TGG - chr1_3:7018213-7018232 Msa0100560:CDS 20.0%
!! TATAGTATGCATGTATTTAA+TGG - chr1_3:7018915-7018934 Msa0100560:intron 20.0%
!! TGACAGATATACATATAATT+TGG - chr1_3:7020026-7020045 Msa0100560:intron 20.0%
!!! TTTAGAATGTGAATTGAATA+TGG - chr1_3:7020146-7020165 Msa0100560:intron 20.0%
!!! GATTTTTTTTATGTTTCTTC+TGG - chr1_3:7020963-7020982 Msa0100560:CDS 20.0%
!!! CACTAACTATTATATGATTT+TGG + chr1_3:7021289-7021308 None:intergenic 20.0%
!!! TTTCTAGAATAAAGAAATCA+AGG - chr1_3:7021684-7021703 Msa0100560:CDS 20.0%
!! TTGTTGTATTCTTAAGAATT+AGG - chr1_3:7022720-7022739 Msa0100560:intron 20.0%
!! TGTTGTATTCTTAAGAATTA+GGG - chr1_3:7022721-7022740 Msa0100560:intron 20.0%
!!! TATTTTAGTTAAGCGATAAT+AGG + chr1_3:7022799-7022818 None:intergenic 20.0%
!! GTAATTATTTAGTTGCAAAT+TGG - chr1_3:7022960-7022979 Msa0100560:intron 20.0%
!!! ATAGAAGTATAATTACCTTT+TGG - chr1_3:7022983-7023002 Msa0100560:intron 20.0%
!!! TAGAAGTATAATTACCTTTT+GGG - chr1_3:7022984-7023003 Msa0100560:intron 20.0%
!!! AACTTAATGAGACATTTTTA+AGG + chr1_3:7023030-7023049 None:intergenic 20.0%
!! GAAAATAAAATTTGAACGAA+TGG + chr1_3:7023663-7023682 None:intergenic 20.0%
!!! ATAGTTGATTGACTTTATTT+TGG + chr1_3:7023724-7023743 None:intergenic 20.0%
!! TGATAATAACTGTATATGAA+CGG - chr1_3:7023916-7023935 Msa0100560:intron 20.0%
!! CATAGTATAACTATACAAAT+TGG + chr1_3:7024010-7024029 None:intergenic 20.0%
!!! TTACGATATTAACTATCTTT+TGG - chr1_3:7024524-7024543 Msa0100560:CDS 20.0%
!! AAATTCCAACCTTAAAAAAT+AGG + chr1_3:7024766-7024785 None:intergenic 20.0%
!!! GAGTAGTATATTTTGATATT+TGG - chr1_3:7025387-7025406 Msa0100560:CDS 20.0%
!!! TCTGAAAATTTTCTAAAAAG+TGG + chr1_3:7025785-7025804 None:intergenic 20.0%
!!! AATTTGGTATTCTAATGTTT+TGG - chr1_3:7026192-7026211 Msa0100560:intron 20.0%
!!! ATTTGGTATTCTAATGTTTT+GGG - chr1_3:7026193-7026212 Msa0100560:intron 20.0%
!! TTATATGCATAAGAAATCAA+TGG + chr1_3:7026700-7026719 None:intergenic 20.0%
!! CTAACTAATGTTTATTTATG+TGG - chr1_3:7026896-7026915 Msa0100560:CDS 20.0%
!! AACATTCAATACAGATTATA+TGG + chr1_3:7027019-7027038 None:intergenic 20.0%
!! ATATAATCTGTATTGAATGT+TGG - chr1_3:7027018-7027037 Msa0100560:CDS 20.0%
!!! TTTTTAATATGGCAATCAAT+CGG + chr1_3:7027086-7027105 None:intergenic 20.0%
!! ACAAAATAATAGACTTTCAT+TGG + chr1_3:7027162-7027181 None:intergenic 20.0%
!! TTAAATTTGATTGTATGAAG+TGG - chr1_3:7027232-7027251 Msa0100560:intron 20.0%
!! GCTATATATAATTGAGTTAA+AGG + chr1_3:7027289-7027308 None:intergenic 20.0%
!! TTAACTCAATTATATATAGC+CGG - chr1_3:7027289-7027308 Msa0100560:intron 20.0%
!!! CTGAAATTAATCTCATATTT+TGG + chr1_3:7027527-7027546 None:intergenic 20.0%
!! TTAATTTCAGTAGTTATGAT+TGG - chr1_3:7027537-7027556 Msa0100560:intron 20.0%
!!! TAAGTGATATTTTGTTTTGT+AGG - chr1_3:7027727-7027746 Msa0100560:intron 20.0%
!!! TTTTTTGAATTGCAATAACA+TGG + chr1_3:7027842-7027861 None:intergenic 20.0%
! AATAAATTACCTGAACCTTT+AGG + chr1_3:7015001-7015020 None:intergenic 25.0%
! AACACTGTGCATAAAAAATA+TGG + chr1_3:7015401-7015420 None:intergenic 25.0%
! ATAACCAATGTAATTGATGA+TGG + chr1_3:7015535-7015554 None:intergenic 25.0%
!!! ATTTCTATTGTTGACTTGAA+AGG - chr1_3:7016197-7016216 Msa0100560:intron 25.0%
! TGTGAAATTAATGTTTGATG+TGG + chr1_3:7016367-7016386 None:intergenic 25.0%
! GTTGTATTTCTTAAAATCTG+GGG - chr1_3:7016614-7016633 Msa0100560:CDS 25.0%
!! TGCTTAATGTTTCATTTTGT+AGG - chr1_3:7016663-7016682 Msa0100560:intron 25.0%
!! AGGAAAAGACAATTTTTCTA+TGG - chr1_3:7016762-7016781 Msa0100560:intron 25.0%
!!! AGTAAAAAGCATTTACCAAA+TGG + chr1_3:7016970-7016989 None:intergenic 25.0%
!! GATGCTTTAGATTATATCTT+CGG - chr1_3:7017050-7017069 Msa0100560:intron 25.0%
!! ATGCTTTAGATTATATCTTC+GGG - chr1_3:7017051-7017070 Msa0100560:intron 25.0%
! ATGCACCAAAAAATAAATTG+AGG + chr1_3:7017260-7017279 None:intergenic 25.0%
!! AGTCTTTACATTCTTCTTTT+TGG + chr1_3:7017562-7017581 None:intergenic 25.0%
! AAAAAGAAGAATGTAAAGAC+TGG - chr1_3:7017561-7017580 Msa0100560:intron 25.0%
! AATAAACAAAATCCACAGTT+AGG + chr1_3:7017841-7017860 None:intergenic 25.0%
! ACCGGAATTCAATAAATATT+TGG - chr1_3:7018200-7018219 Msa0100560:CDS 25.0%
! TTCAAATCCAGAATTTACTT+TGG + chr1_3:7018265-7018284 None:intergenic 25.0%
!! ATTTGAAGTAAATCAGTTCA+TGG - chr1_3:7018278-7018297 Msa0100560:CDS 25.0%
! TATATCTTTCCATTAACAAC+TGG + chr1_3:7018351-7018370 None:intergenic 25.0%
! ATGATATGAATCAAAAGCTA+GGG - chr1_3:7018658-7018677 Msa0100560:intron 25.0%
! ATTGAAATTTCCCCAAAATA+GGG - chr1_3:7018755-7018774 Msa0100560:intron 25.0%
!! TGTTTTCTTAGTTTCTTACT+TGG - chr1_3:7018871-7018890 Msa0100560:intron 25.0%
! ACCTTTACAATCTAAACAAA+AGG - chr1_3:7018993-7019012 Msa0100560:intron 25.0%
!!! TCCTTTTGTTTAGATTGTAA+AGG + chr1_3:7018997-7019016 None:intergenic 25.0%
!!! TTTGTTACAGCTTATTTTTG+TGG - chr1_3:7019183-7019202 Msa0100560:intron 25.0%
! AACACTTCAGAATGAAAATA+GGG - chr1_3:7019537-7019556 Msa0100560:CDS 25.0%
!! ACCTTTATTGTTTGGTAATT+TGG - chr1_3:7020300-7020319 Msa0100560:intron 25.0%
! CAATCAGATGTATATTTGTT+AGG - chr1_3:7020543-7020562 Msa0100560:intron 25.0%
! AAAAATGTTGTATCACATGA+TGG + chr1_3:7020834-7020853 None:intergenic 25.0%
!!! TACAACATTTTTAGATCAGA+TGG - chr1_3:7020842-7020861 Msa0100560:CDS 25.0%
! AATAATTCTGTTCAAAGGTT+TGG + chr1_3:7020916-7020935 None:intergenic 25.0%
! AAACCTTTGAACAGAATTAT+TGG - chr1_3:7020915-7020934 Msa0100560:CDS 25.0%
! TTTGAACAGAATTATTGGTA+CGG - chr1_3:7020920-7020939 Msa0100560:CDS 25.0%
!!! ATTCTTTGATTTGGAAGAAA+AGG - chr1_3:7021258-7021277 Msa0100560:CDS 25.0%
! AAAAAAGCAAAAGAGAAATG+AGG - chr1_3:7021355-7021374 Msa0100560:CDS 25.0%
! ATTTCTTCAGATAAACTAGA+AGG + chr1_3:7021467-7021486 None:intergenic 25.0%
!! TTCTTTATTCTAGAAATTCC+AGG + chr1_3:7021680-7021699 None:intergenic 25.0%
! TAGAATAAAGAAATCAAGGA+AGG - chr1_3:7021688-7021707 Msa0100560:CDS 25.0%
!! GATTTAACTTCTGATTTCTT+CGG - chr1_3:7021710-7021729 Msa0100560:CDS 25.0%
! ATATCATCTTCTAGCATAAA+AGG - chr1_3:7021785-7021804 Msa0100560:CDS 25.0%
! ATTAATGAAATCACTGCTAA+AGG - chr1_3:7022253-7022272 Msa0100560:CDS 25.0%
! CAAGAAATAATGACATGATA+TGG - chr1_3:7022346-7022365 Msa0100560:CDS 25.0%
! AATATAGGTAACTTCATAAC+CGG + chr1_3:7022376-7022395 None:intergenic 25.0%
!!! CTTTTTTTGATCCAAGATAA+TGG - chr1_3:7022767-7022786 Msa0100560:intron 25.0%
! TAAATAAGCGAATAAATCTC+AGG - chr1_3:7022866-7022885 Msa0100560:intron 25.0%
! ATTCAAAACATAAACCCAAA+AGG + chr1_3:7023001-7023020 None:intergenic 25.0%
! AATTAATGAAGGACATGTTT+GGG + chr1_3:7023277-7023296 None:intergenic 25.0%
! GAAAGAAACTGAATTAATGA+AGG + chr1_3:7023288-7023307 None:intergenic 25.0%
!! GAGAAATTTGAAATGCTTAT+TGG + chr1_3:7023573-7023592 None:intergenic 25.0%
!!! ATTGACTTTATTTTGGCATA+TGG + chr1_3:7023717-7023736 None:intergenic 25.0%
!! AATTTGCTTGATATATGCAT+GGG + chr1_3:7023872-7023891 None:intergenic 25.0%
! TATAGTTGAGAGCAATATAA+AGG + chr1_3:7023952-7023971 None:intergenic 25.0%
!! TTGAATTTTATGGAAGATGT+GGG - chr1_3:7024347-7024366 Msa0100560:CDS 25.0%
!! ACTATCTTTTGGATTTTTCT+AGG - chr1_3:7024535-7024554 Msa0100560:CDS 25.0%
!! CTATCTTTTGGATTTTTCTA+GGG - chr1_3:7024536-7024555 Msa0100560:CDS 25.0%
!!! GAGTGGTATATTTTGATATT+TGG - chr1_3:7025169-7025188 Msa0100560:CDS 25.0%
! TAGAAAAACTGAAACTGTAT+TGG - chr1_3:7025202-7025221 Msa0100560:CDS 25.0%
! AATCGTTACTGTAATTCTAT+CGG + chr1_3:7025323-7025342 None:intergenic 25.0%
! TAGAAAAACTGAAACTGTAT+TGG - chr1_3:7025202-7025221 Msa0100560:CDS 25.0%
! AATCGTTACTGTAATTCTAT+CGG + chr1_3:7025323-7025342 None:intergenic 25.0%
! AAAAAGTGGTAAAAAACAGA+AGG + chr1_3:7025771-7025790 None:intergenic 25.0%
!! AATCTTGTTGTATACAAATC+TGG - chr1_3:7026284-7026303 Msa0100560:intron 25.0%
!! ATCTTGTTGTATACAAATCT+GGG - chr1_3:7026285-7026304 Msa0100560:intron 25.0%
! AAATAATAGACTTTCATTGG+AGG + chr1_3:7027159-7027178 None:intergenic 25.0%
! TAACTCAATTATATATAGCC+GGG - chr1_3:7027290-7027309 Msa0100560:intron 25.0%
!!! TTAACTTTTTTTCAGATGCA+TGG - chr1_3:7027423-7027442 Msa0100560:intron 25.0%
!! TGAATGATTTTATGGAAATG+AGG - chr1_3:7027573-7027592 Msa0100560:intron 25.0%
!! GAATGATTTTATGGAAATGA+GGG - chr1_3:7027574-7027593 Msa0100560:intron 25.0%
!! GTCATGTCTCTAATATTTTA+TGG + chr1_3:7027624-7027643 None:intergenic 25.0%
! TCAATTACTAACTACATATC+TGG - chr1_3:7027660-7027679 Msa0100560:intron 25.0%
!! TTTTCTTTTCTTCATCTTCT+CGG + chr1_3:7027817-7027836 None:intergenic 25.0%
! ATTGCAATTCAAAAAATTGC+AGG - chr1_3:7027846-7027865 Msa0100560:intron 25.0%
! TTAACAATTTAACGACTCAT+GGG + chr1_3:7027905-7027924 None:intergenic 25.0%
! TTTAACAATTTAACGACTCA+TGG + chr1_3:7027906-7027925 None:intergenic 25.0%
! ATGAAATCGTTGTATGAAAA+AGG - chr1_3:7028039-7028058 Msa0100560:five_prime_UTR 25.0%
! ATTTTCGTTCATATGAAGCA+TGG - chr1_3:7015225-7015244 Msa0100560:intron 30.0%
! TTTTCGTTCATATGAAGCAT+GGG - chr1_3:7015226-7015245 Msa0100560:intron 30.0%
TTTAAACCATGAGTATCTTG+CGG + chr1_3:7015593-7015612 None:intergenic 30.0%
! ACTTTTCCTGGTATTTATTC+CGG - chr1_3:7015863-7015882 Msa0100560:intron 30.0%
AAAAATTTAAACCGGAAGCA+GGG + chr1_3:7016000-7016019 None:intergenic 30.0%
TGAGCTCCAAAAATTTAAAC+CGG + chr1_3:7016008-7016027 None:intergenic 30.0%
TATGCAATCGACATCAAAAT+CGG - chr1_3:7016030-7016049 Msa0100560:intron 30.0%
ATCTTCTTCTAAGCAATACT+GGG - chr1_3:7016225-7016244 Msa0100560:intron 30.0%
AAAACTTGAGTATAGACATG+TGG + chr1_3:7016283-7016302 None:intergenic 30.0%
GAGGTAAATAATGACAAAAC+TGG - chr1_3:7016305-7016324 Msa0100560:CDS 30.0%
TATTGTCTAACTGTTCACAA+TGG + chr1_3:7016392-7016411 None:intergenic 30.0%
!! ATTTTGATATTGCAGCATTC+AGG - chr1_3:7016522-7016541 Msa0100560:intron 30.0%
! TTTTGATATTGCAGCATTCA+GGG - chr1_3:7016523-7016542 Msa0100560:intron 30.0%
AAAGAATTGCTTATACCTCA+AGG - chr1_3:7016879-7016898 Msa0100560:intron 30.0%
AAATACTAGAGGAAAGCAAA+TGG + chr1_3:7016935-7016954 None:intergenic 30.0%
CCATATCTTGAAAATACTAG+AGG + chr1_3:7016946-7016965 None:intergenic 30.0%
!! CCTCTAGTATTTTCAAGATA+TGG - chr1_3:7016943-7016962 Msa0100560:intron 30.0%
!! TTTTCAAGATATGGACCATT+TGG - chr1_3:7016952-7016971 Msa0100560:intron 30.0%
!! TTGGTAAATGCTTTTTACTC+TGG - chr1_3:7016971-7016990 Msa0100560:intron 30.0%
TTGGTTGTTGAAAATACTTC+TGG + chr1_3:7017099-7017118 None:intergenic 30.0%
!!! GCAGACCTCAATTTATTTTT+TGG - chr1_3:7017252-7017271 Msa0100560:intron 30.0%
CCATATTAGATTTCACTATC+CGG + chr1_3:7017383-7017402 None:intergenic 30.0%
!!! TGCTCTTTTAGAATGTTTGT+TGG + chr1_3:7017531-7017550 None:intergenic 30.0%
! ACATCCAGACATATAGTTTT+GGG + chr1_3:7017935-7017954 None:intergenic 30.0%
! TACATCCAGACATATAGTTT+TGG + chr1_3:7017936-7017955 None:intergenic 30.0%
TGAGAACTAAATTGTGGAAA+TGG + chr1_3:7018027-7018046 None:intergenic 30.0%
! GCTTGTAAAAATTTGGTGAA+TGG - chr1_3:7018066-7018085 Msa0100560:intron 30.0%
! TGTAAAAATTTGGTGAATGG+TGG - chr1_3:7018069-7018088 Msa0100560:intron 30.0%
! AATGTTGACTGGAATAGTAA+TGG - chr1_3:7018147-7018166 Msa0100560:intron 30.0%
!! AATGATAATGGTGAAAGGTT+TGG - chr1_3:7018225-7018244 Msa0100560:CDS 30.0%
GTAAATCAGTTCATGGAATT+TGG - chr1_3:7018285-7018304 Msa0100560:CDS 30.0%
TCTATCAGAAGAACTATTGA+TGG - chr1_3:7018309-7018328 Msa0100560:CDS 30.0%
!!! AGAGGAAGATACATTTTTTG+AGG + chr1_3:7018424-7018443 None:intergenic 30.0%
TCAAAAAATGTATCTTCCTC+TGG - chr1_3:7018423-7018442 Msa0100560:CDS 30.0%
GCATGATTGATCAAAATACA+AGG - chr1_3:7018577-7018596 Msa0100560:intron 30.0%
CATGATATGAATCAAAAGCT+AGG - chr1_3:7018657-7018676 Msa0100560:intron 30.0%
! AGCCTTGTATATATAGTTCT+GGG + chr1_3:7018703-7018722 None:intergenic 30.0%
! AAGCCTTGTATATATAGTTC+TGG + chr1_3:7018704-7018723 None:intergenic 30.0%
CATTGAAATTTCCCCAAAAT+AGG - chr1_3:7018754-7018773 Msa0100560:intron 30.0%
TTGAAATTTCCCCAAAATAG+GGG - chr1_3:7018756-7018775 Msa0100560:intron 30.0%
! TGTTTAGATTGTAAAGGTGT+TGG + chr1_3:7018991-7019010 None:intergenic 30.0%
AGATATCGTGTTATGTCATA+AGG - chr1_3:7019081-7019100 Msa0100560:intron 30.0%
ACACGCTTTATGTTGAAATT+TGG - chr1_3:7019306-7019325 Msa0100560:intron 30.0%
CACGCTTTATGTTGAAATTT+GGG - chr1_3:7019307-7019326 Msa0100560:intron 30.0%
ACGCTTTATGTTGAAATTTG+GGG - chr1_3:7019308-7019327 Msa0100560:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + chr1_3:7019379-7019398 None:intergenic 30.0%
!!! CTATTTTCATTCTGAAGTGT+TGG + chr1_3:7019538-7019557 None:intergenic 30.0%
CAACACTTCAGAATGAAAAT+AGG - chr1_3:7019536-7019555 Msa0100560:CDS 30.0%
GCATAATTAACAAGTGAGTT+GGG + chr1_3:7019887-7019906 None:intergenic 30.0%
AAACCACATAAATGTTACAG+TGG + chr1_3:7019979-7019998 None:intergenic 30.0%
! ACATATAATTTGGTAGCACT+TGG - chr1_3:7020036-7020055 Msa0100560:intron 30.0%
! CATATAATTTGGTAGCACTT+GGG - chr1_3:7020037-7020056 Msa0100560:intron 30.0%
! ATATAATTTGGTAGCACTTG+GGG - chr1_3:7020038-7020057 Msa0100560:intron 30.0%
ATATATCCATCAATGTGTTC+GGG + chr1_3:7020183-7020202 None:intergenic 30.0%
CATATATCCATCAATGTGTT+CGG + chr1_3:7020184-7020203 None:intergenic 30.0%
ATCATCGAAGTACAAATCAA+CGG - chr1_3:7020212-7020231 Msa0100560:intron 30.0%
GAACTCTTACCTTTATTGTT+TGG - chr1_3:7020292-7020311 Msa0100560:intron 30.0%
GCCAAATTACCAAACAATAA+AGG + chr1_3:7020304-7020323 None:intergenic 30.0%
!! TGCAAACTTTTTCTTCTACT+GGG - chr1_3:7020423-7020442 Msa0100560:intron 30.0%
! TAACTAAAGTTCACCCTTTT+TGG - chr1_3:7020451-7020470 Msa0100560:intron 30.0%
AATTGTTGCAGAAACAATGT+TGG - chr1_3:7020591-7020610 Msa0100560:intron 30.0%
! GAAAAGTATGCAGATGTTAA+TGG - chr1_3:7020648-7020667 Msa0100560:CDS 30.0%
GTACCAATAATTCTGTTCAA+AGG + chr1_3:7020921-7020940 None:intergenic 30.0%
CCAACAGTTTAATATCATCA+AGG + chr1_3:7021238-7021257 None:intergenic 30.0%
! CCTTGATGATATTAAACTGT+TGG - chr1_3:7021235-7021254 Msa0100560:CDS 30.0%
AACTGTTGGATTCTTTGATT+TGG - chr1_3:7021249-7021268 Msa0100560:CDS 30.0%
AATCCATCTCAAAAAGTCAA+GGG - chr1_3:7021323-7021342 Msa0100560:CDS 30.0%
TTTAGACGATTCTTACAAGA+GGG + chr1_3:7021590-7021609 None:intergenic 30.0%
GATATCTGCTTAGCATTATT+AGG + chr1_3:7021770-7021789 None:intergenic 30.0%
!! TACATCTTTTGGAAGTTCTA+AGG + chr1_3:7021925-7021944 None:intergenic 30.0%
AACTTCCAAAAGATGTAGTA+TGG - chr1_3:7021928-7021947 Msa0100560:CDS 30.0%
!! TTCGTTTTTGTAGTTAGTCT+GGG + chr1_3:7021971-7021990 None:intergenic 30.0%
!! TTTCGTTTTTGTAGTTAGTC+TGG + chr1_3:7021972-7021991 None:intergenic 30.0%
GACTAACTACAAAAACGAAA+TGG - chr1_3:7021972-7021991 Msa0100560:CDS 30.0%
TAACTACAAAAACGAAATGG+AGG - chr1_3:7021975-7021994 Msa0100560:CDS 30.0%
! ATCTGGTTTAAAAGCTAAGA+AGG - chr1_3:7022039-7022058 Msa0100560:CDS 30.0%
AAAACCTTCCATAGAAACAT+TGG + chr1_3:7022107-7022126 None:intergenic 30.0%
AGAAGAAAGATACCAATGAA+TGG - chr1_3:7022158-7022177 Msa0100560:CDS 30.0%
AGGTTAAGAGCAGAAAAATT+CGG - chr1_3:7022218-7022237 Msa0100560:CDS 30.0%
! TTTGAGTTAAGTCACTAGTT+TGG - chr1_3:7022280-7022299 Msa0100560:CDS 30.0%
!!! AACATTTTGGAATTCCAAAC+AGG + chr1_3:7022429-7022448 None:intergenic 30.0%
GGAATTCCAAAATGTTACAA+AGG - chr1_3:7022433-7022452 Msa0100560:intron 30.0%
! AGAACACCTTTGTAACATTT+TGG + chr1_3:7022442-7022461 None:intergenic 30.0%
ACTAAACATGCAAATCAACA+AGG + chr1_3:7022479-7022498 None:intergenic 30.0%
TAATGAACAGTGACGTAAAT+TGG + chr1_3:7022524-7022543 None:intergenic 30.0%
TCACACATATGTCATCATAT+TGG + chr1_3:7022548-7022567 None:intergenic 30.0%
! GTGATGCTTTTATATACCAT+CGG - chr1_3:7022938-7022957 Msa0100560:intron 30.0%
TGCAACTAAATAATTACCGA+TGG + chr1_3:7022957-7022976 None:intergenic 30.0%
! AACCCAAATGCCAAATATTT+TGG - chr1_3:7023067-7023086 Msa0100560:intron 30.0%
CTCCAAAATATTTGGCATTT+GGG + chr1_3:7023072-7023091 None:intergenic 30.0%
ACTCCAAAATATTTGGCATT+TGG + chr1_3:7023073-7023092 None:intergenic 30.0%
TCTGCATACTCCAAAATATT+TGG + chr1_3:7023080-7023099 None:intergenic 30.0%
AGAGAAATCTAGGCATTTAA+AGG + chr1_3:7023189-7023208 None:intergenic 30.0%
GAATTAATGAAGGACATGTT+TGG + chr1_3:7023278-7023297 None:intergenic 30.0%
!!! CCATATCTTTTGAGTTTGTT+TGG + chr1_3:7023530-7023549 None:intergenic 30.0%
CCAAACAAACTCAAAAGATA+TGG - chr1_3:7023527-7023546 Msa0100560:intron 30.0%
AAATAATGAAACCTTGGATC+AGG + chr1_3:7023611-7023630 None:intergenic 30.0%
ACGGAAAATAGTTAGGTATT+AGG + chr1_3:7023759-7023778 None:intergenic 30.0%
AATAGCAACGGAAAATAGTT+AGG + chr1_3:7023766-7023785 None:intergenic 30.0%
!! AACTATTTTCCGTTGCTATT+TGG - chr1_3:7023766-7023785 Msa0100560:intron 30.0%
! GAATTTGCTTGATATATGCA+TGG + chr1_3:7023873-7023892 None:intergenic 30.0%
!! TAAGTTGCGAAGCATTTTAT+TGG - chr1_3:7024146-7024165 Msa0100560:CDS 30.0%
TTCAAAAACCAATGAAACGT+TGG + chr1_3:7024178-7024197 None:intergenic 30.0%
TAGGAGTTGTCATACATAAT+AGG + chr1_3:7024258-7024277 None:intergenic 30.0%
! GACGAGAAAGTTGAATTTTA+TGG - chr1_3:7024337-7024356 Msa0100560:CDS 30.0%
! GTTGAATTTTATGGAAGATG+TGG - chr1_3:7024346-7024365 Msa0100560:CDS 30.0%
! TCCTGATAATGCTATAACAA+CGG + chr1_3:7024475-7024494 None:intergenic 30.0%
TATAGACATCATCCAATCTA+CGG + chr1_3:7024571-7024590 None:intergenic 30.0%
!!! GTGTAGTCTCCTATTTTTTA+AGG - chr1_3:7024754-7024773 Msa0100560:CDS 30.0%
!!! AGTCTCCTATTTTTTAAGGT+TGG - chr1_3:7024758-7024777 Msa0100560:CDS 30.0%
TCTACTGCAATGGAATTATT+CGG + chr1_3:7025000-7025019 None:intergenic 30.0%
!! TCTTTGTTATTCTACTGCAA+TGG + chr1_3:7025010-7025029 None:intergenic 30.0%
ACTGTATTGGAATCTGTTAT+TGG - chr1_3:7025215-7025234 Msa0100560:CDS 30.0%
ACAATAAACGAGTTATCTGA+AGG + chr1_3:7025245-7025264 None:intergenic 30.0%
ACTGTATTGGAATCTGTTAT+TGG - chr1_3:7025215-7025234 Msa0100560:CDS 30.0%
ACAATAAACGAGTTCTCTAA+AGG + chr1_3:7025463-7025482 None:intergenic 30.0%
AAAAGAAATTGGCACAAAAC+AGG - chr1_3:7025729-7025748 Msa0100560:CDS 30.0%
CAAGTTTACAATCTTAGGTA+GGG + chr1_3:7025884-7025903 None:intergenic 30.0%
ACAAGTTTACAATCTTAGGT+AGG + chr1_3:7025885-7025904 None:intergenic 30.0%
TACCTAAGATTGTAAACTTG+TGG - chr1_3:7025884-7025903 Msa0100560:intron 30.0%
CCAAAGAACAAAATGCTATT+GGG + chr1_3:7026154-7026173 None:intergenic 30.0%
! CCAATAGCATTTTGTTCTTT+GGG - chr1_3:7026152-7026171 Msa0100560:intron 30.0%
! CAATAGCATTTTGTTCTTTG+GGG - chr1_3:7026153-7026172 Msa0100560:intron 30.0%
ATTTGCAGAAAGAATATGCT+TGG - chr1_3:7026237-7026256 Msa0100560:intron 30.0%
TGTGTTTCTCATACTTCTAT+AGG - chr1_3:7026414-7026433 Msa0100560:intron 30.0%
AGAGAGATTGAATACATATC+TGG - chr1_3:7026484-7026503 Msa0100560:intron 30.0%
AGATTGAATACATATCTGGA+AGG - chr1_3:7026488-7026507 Msa0100560:intron 30.0%
! ATTTGTTAACCATTCATGTC+TGG - chr1_3:7026597-7026616 Msa0100560:CDS 30.0%
AGTAATATACCAGACATGAA+TGG + chr1_3:7026609-7026628 None:intergenic 30.0%
TTCATGTCTGGTATATTACT+TGG - chr1_3:7026609-7026628 Msa0100560:CDS 30.0%
AACAATAATCAAATGCAGAG+TGG + chr1_3:7026640-7026659 None:intergenic 30.0%
AACTCAATTATATATAGCCG+GGG - chr1_3:7027291-7027310 Msa0100560:intron 30.0%
!!! ATATTTTGGTATGCCTCATA+TGG + chr1_3:7027513-7027532 None:intergenic 30.0%
TTGTATGAAAAAGGATAACG+AGG - chr1_3:7028048-7028067 Msa0100560:five_prime_UTR 30.0%
! AAAGAGTGTATGTGTGTAGT+GGG + chr1_3:7014833-7014852 None:intergenic 35.0%
AGAAACTAAAGTGTGATCAC+CGG + chr1_3:7015087-7015106 None:intergenic 35.0%
! ACGCTTTTGCATAAGGAAAA+TGG + chr1_3:7015110-7015129 None:intergenic 35.0%
! ATGTAAGACGCTTTTGCATA+AGG + chr1_3:7015117-7015136 None:intergenic 35.0%
TGCAATCATACATTCTGTCA+TGG - chr1_3:7015179-7015198 Msa0100560:intron 35.0%
ATGGTTTACGCTTTACATTG+TGG - chr1_3:7015198-7015217 Msa0100560:intron 35.0%
!!! GCTGGTTGGTAATTTTAGTA+AGG + chr1_3:7015368-7015387 None:intergenic 35.0%
TGCACAGTGTTGTCAAATAT+CGG - chr1_3:7015410-7015429 Msa0100560:intron 35.0%
!! ATGTAATTGATGATGGATGG+CGG + chr1_3:7015528-7015547 None:intergenic 35.0%
!! CCAATGTAATTGATGATGGA+TGG + chr1_3:7015531-7015550 None:intergenic 35.0%
CCATCCATCATCAATTACAT+TGG - chr1_3:7015528-7015547 Msa0100560:intron 35.0%
TATTATCCGCAAGATACTCA+TGG - chr1_3:7015584-7015603 Msa0100560:intron 35.0%
AAATTACACTGCCACAACAA+CGG + chr1_3:7015708-7015727 None:intergenic 35.0%
TCTATAGAATCAACAAGCCA+TGG + chr1_3:7015785-7015804 None:intergenic 35.0%
! CTTTTCCTGGTATTTATTCC+GGG - chr1_3:7015864-7015883 Msa0100560:intron 35.0%
! TTTTCCTGGTATTTATTCCG+GGG - chr1_3:7015865-7015884 Msa0100560:intron 35.0%
! AGGGAATCTTTTTCTTCTAG+AGG - chr1_3:7015956-7015975 Msa0100560:intron 35.0%
! GGGAATCTTTTTCTTCTAGA+GGG - chr1_3:7015957-7015976 Msa0100560:intron 35.0%
CAAAAATTTAAACCGGAAGC+AGG + chr1_3:7016001-7016020 None:intergenic 35.0%
! CTGCTTCCGGTTTAAATTTT+TGG - chr1_3:7015999-7016018 Msa0100560:intron 35.0%
!! TCTATTGTTGACTTGAAAGG+TGG - chr1_3:7016200-7016219 Msa0100560:intron 35.0%
CAGTATTGCTTAGAAGAAGA+TGG + chr1_3:7016226-7016245 None:intergenic 35.0%
CATCTTCTTCTAAGCAATAC+TGG - chr1_3:7016224-7016243 Msa0100560:intron 35.0%
!! GTCTATACTCAAGTTTTGTG+AGG - chr1_3:7016286-7016305 Msa0100560:CDS 35.0%
ATGACTTGATAAACATCCGA+TGG + chr1_3:7016742-7016761 None:intergenic 35.0%
TCGGATGTTTATCAAGTCAT+AGG - chr1_3:7016742-7016761 Msa0100560:intron 35.0%
CGTATGATGTAGTCAATTGT+GGG + chr1_3:7016817-7016836 None:intergenic 35.0%
TCGTATGATGTAGTCAATTG+TGG + chr1_3:7016818-7016837 None:intergenic 35.0%
! GTTTGAAGTTAAGCAAACAC+TGG - chr1_3:7017011-7017030 Msa0100560:intron 35.0%
!! GTTTGATATCGGTTGTTTTC+TGG + chr1_3:7017286-7017305 None:intergenic 35.0%
AAAACAACCGATATCAAACG+AGG - chr1_3:7017287-7017306 Msa0100560:intron 35.0%
! AAAGCGTTTAAACCTTTGAG+TGG + chr1_3:7017327-7017346 None:intergenic 35.0%
CCGGATAGTGAAATCTAATA+TGG - chr1_3:7017380-7017399 Msa0100560:intron 35.0%
! CTTTTCAGAGAATCAAGGAA+AGG + chr1_3:7017471-7017490 None:intergenic 35.0%
! CTTTCCTTGATTCTCTGAAA+AGG - chr1_3:7017469-7017488 Msa0100560:intron 35.0%
ATTTGTGTAGACTGGGTAAT+TGG + chr1_3:7017507-7017526 None:intergenic 35.0%
TGTTGGAATTTGTGTAGACT+GGG + chr1_3:7017514-7017533 None:intergenic 35.0%
TTGTTGGAATTTGTGTAGAC+TGG + chr1_3:7017515-7017534 None:intergenic 35.0%
!! AATGTAAAGACTGGTCTACT+AGG - chr1_3:7017570-7017589 Msa0100560:intron 35.0%
GATTCTACAAACGAATCAAC+TGG + chr1_3:7017657-7017676 None:intergenic 35.0%
ACTATTAGTCATCTGCATCA+GGG + chr1_3:7017718-7017737 None:intergenic 35.0%
AACAAAATCCACAGTTAGGA+GGG + chr1_3:7017837-7017856 None:intergenic 35.0%
AAACAAAATCCACAGTTAGG+AGG + chr1_3:7017838-7017857 None:intergenic 35.0%
TATTAACTACAGACCTTAGC+AGG - chr1_3:7017857-7017876 Msa0100560:intron 35.0%
ATTAACTACAGACCTTAGCA+GGG - chr1_3:7017858-7017877 Msa0100560:intron 35.0%
!! CATCCAGACATATAGTTTTG+GGG + chr1_3:7017934-7017953 None:intergenic 35.0%
!! TTGGGTTGAGAACTAAATTG+TGG + chr1_3:7018033-7018052 None:intergenic 35.0%
!! AATTTAGTTCTCAACCCAAG+TGG - chr1_3:7018034-7018053 Msa0100560:intron 35.0%
TATTCAGAATGCAGGTTCAT+GGG + chr1_3:7018102-7018121 None:intergenic 35.0%
GAATACGATACTGTGCAATT+TGG - chr1_3:7018117-7018136 Msa0100560:intron 35.0%
! TTGGTTCTTCTAATGTTGAC+TGG - chr1_3:7018136-7018155 Msa0100560:intron 35.0%
TGGAATAGTAATGGTCACAA+AGG - chr1_3:7018156-7018175 Msa0100560:CDS 35.0%
ATAGTAATGGTCACAAAGGA+AGG - chr1_3:7018160-7018179 Msa0100560:CDS 35.0%
!! TGGACAATGATAATGGTGAA+AGG - chr1_3:7018220-7018239 Msa0100560:CDS 35.0%
TCCTGTACCAAAGTAAATTC+TGG - chr1_3:7018255-7018274 Msa0100560:CDS 35.0%
TCCAGAATTTACTTTGGTAC+AGG + chr1_3:7018259-7018278 None:intergenic 35.0%
! AGAAGAACTATTGATGGTAG+TGG - chr1_3:7018315-7018334 Msa0100560:intron 35.0%
ACGAAACAATCACTTGACTT+TGG - chr1_3:7018446-7018465 Msa0100560:CDS 35.0%
CGAAACAATCACTTGACTTT+GGG - chr1_3:7018447-7018466 Msa0100560:CDS 35.0%
GAAACAATCACTTGACTTTG+GGG - chr1_3:7018448-7018467 Msa0100560:CDS 35.0%
GAAAGACTCTTTCCTACAAA+TGG + chr1_3:7018483-7018502 None:intergenic 35.0%
! GCAACAACAGGGTATTAATA+TGG - chr1_3:7018548-7018567 Msa0100560:CDS 35.0%
! TGTTGTTGCTTAGATAACTC+CGG + chr1_3:7018624-7018643 None:intergenic 35.0%
AATCAAAAGCTAGGGAATTC+AGG - chr1_3:7018666-7018685 Msa0100560:intron 35.0%
ACCCCAGAACTATATATACA+AGG - chr1_3:7018698-7018717 Msa0100560:intron 35.0%
! GCCTTGTATATATAGTTCTG+GGG + chr1_3:7018702-7018721 None:intergenic 35.0%
TGAAATTTCCCCAAAATAGG+GGG - chr1_3:7018757-7018776 Msa0100560:intron 35.0%
GATGGTATACACTAACTATC+TGG - chr1_3:7018804-7018823 Msa0100560:intron 35.0%
TCTTAGTTTCTTACTTGGCA+TGG - chr1_3:7018876-7018895 Msa0100560:intron 35.0%
!! TTGTAAAGGTGTTGGTGTTA+AGG + chr1_3:7018983-7019002 None:intergenic 35.0%
TCCTACGATCTTCAAAATGA+TGG - chr1_3:7019033-7019052 Msa0100560:intron 35.0%
CCTACGATCTTCAAAATGAT+GGG - chr1_3:7019034-7019053 Msa0100560:intron 35.0%
GCTAGAAATTCGTCTTTCTT+TGG - chr1_3:7019124-7019143 Msa0100560:intron 35.0%
AGAAATTCGTCTTTCTTTGG+TGG - chr1_3:7019127-7019146 Msa0100560:intron 35.0%
!! TTTTGTGGCATCTTTAAGAG+TGG - chr1_3:7019198-7019217 Msa0100560:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + chr1_3:7019376-7019395 None:intergenic 35.0%
AATAGGACCAAACTGAATAG+AGG + chr1_3:7019657-7019676 None:intergenic 35.0%
ATTCAGTTTGGTCCTATTTC+TGG - chr1_3:7019659-7019678 Msa0100560:intron 35.0%
TATTAGGTATGCACTACGAA+TGG + chr1_3:7019688-7019707 None:intergenic 35.0%
ACATGAAAGAAGTTACAGCA+GGG + chr1_3:7019748-7019767 None:intergenic 35.0%
GGCATAATTAACAAGTGAGT+TGG + chr1_3:7019888-7019907 None:intergenic 35.0%
ATGCCTTAGAGTAGATGTAT+TGG - chr1_3:7019903-7019922 Msa0100560:intron 35.0%
TGCCTTAGAGTAGATGTATT+GGG - chr1_3:7019904-7019923 Msa0100560:intron 35.0%
ACATAAATGTTACAGTGGCA+TGG + chr1_3:7019974-7019993 None:intergenic 35.0%
ATGCCACTGTAACATTTATG+TGG - chr1_3:7019973-7019992 Msa0100560:intron 35.0%
!!! AACACTGTTGCTTTTCAACT+TGG - chr1_3:7020071-7020090 Msa0100560:intron 35.0%
!!! ACACTGTTGCTTTTCAACTT+GGG - chr1_3:7020072-7020091 Msa0100560:intron 35.0%
! CGAACACATTGATGGATATA+TGG - chr1_3:7020182-7020201 Msa0100560:intron 35.0%
TCATCGAAGTACAAATCAAC+GGG - chr1_3:7020213-7020232 Msa0100560:intron 35.0%
! TGTTTGGTAATTTGGCTTCT+TGG - chr1_3:7020308-7020327 Msa0100560:intron 35.0%
! GTTTGGTAATTTGGCTTCTT+GGG - chr1_3:7020309-7020328 Msa0100560:intron 35.0%
! TGCTTTTGATCTAACAAGTC+AGG + chr1_3:7020380-7020399 None:intergenic 35.0%
!! TGACTTGTTAGATCAAAAGC+AGG - chr1_3:7020379-7020398 Msa0100560:intron 35.0%
!! CTGCAAACTTTTTCTTCTAC+TGG - chr1_3:7020422-7020441 Msa0100560:intron 35.0%
CTGAAACATTAAATTGGCAG+AGG + chr1_3:7020477-7020496 None:intergenic 35.0%
CCAAGGCTGAAACATTAAAT+TGG + chr1_3:7020483-7020502 None:intergenic 35.0%
CCAATTTAATGTTTCAGCCT+TGG - chr1_3:7020480-7020499 Msa0100560:intron 35.0%
ATCTGGTATTGTTCATTCCA+AGG + chr1_3:7020500-7020519 None:intergenic 35.0%
!! AGAGCATTTTCTACTTGATC+TGG + chr1_3:7020517-7020536 None:intergenic 35.0%
! AACAATGTTGGCACTGAAAT+TGG - chr1_3:7020603-7020622 Msa0100560:intron 35.0%
! TCTTTTGCAGTATCACAAGA+GGG + chr1_3:7020630-7020649 None:intergenic 35.0%
! TTCTTTTGCAGTATCACAAG+AGG + chr1_3:7020631-7020650 None:intergenic 35.0%
!! CTCTGAAGCTATCTTAAAAG+AGG + chr1_3:7020679-7020698 None:intergenic 35.0%
! TTTAAGATAGCTTCAGAGTG+TGG - chr1_3:7020681-7020700 Msa0100560:CDS 35.0%
AATATCTACTTCGATCCAAG+TGG - chr1_3:7020732-7020751 Msa0100560:CDS 35.0%
TCTCATGGCACAGTAAAAAA+TGG - chr1_3:7020762-7020781 Msa0100560:CDS 35.0%
AAAATCCTGCTCTTTCAACA+AGG + chr1_3:7020949-7020968 None:intergenic 35.0%
TCAATACAACCAGCATTTGT+AGG + chr1_3:7021059-7021078 None:intergenic 35.0%
!!! TTTTTTCAAGTCACTCCCAA+TGG + chr1_3:7021174-7021193 None:intergenic 35.0%
ATTGGGAGTGACTTGAAAAA+AGG - chr1_3:7021173-7021192 Msa0100560:CDS 35.0%
TAATATCATCAAGGAGACTC+TGG + chr1_3:7021229-7021248 None:intergenic 35.0%
!! TTTGATTTGGAAGAAAAGGC+AGG - chr1_3:7021262-7021281 Msa0100560:CDS 35.0%
!!! CTTGACTTTTTGAGATGGAT+TGG + chr1_3:7021324-7021343 None:intergenic 35.0%
CAATCCATCTCAAAAAGTCA+AGG - chr1_3:7021322-7021341 Msa0100560:CDS 35.0%
GAGAGTCTGTGATTAGTATT+AGG + chr1_3:7021548-7021567 None:intergenic 35.0%
TTACAAGAGGGAAATTCAGA+TGG + chr1_3:7021578-7021597 None:intergenic 35.0%
GTTTAGACGATTCTTACAAG+AGG + chr1_3:7021591-7021610 None:intergenic 35.0%
CTACGAGTCAGAATCAAATT+TGG - chr1_3:7021634-7021653 Msa0100560:CDS 35.0%
GTCAGAATCAAATTTGGATG+CGG - chr1_3:7021640-7021659 Msa0100560:CDS 35.0%
TTATTAGGTTCCTCATGTGA+TGG + chr1_3:7021755-7021774 None:intergenic 35.0%
TCATCTTCTAGCATAAAAGG+AGG - chr1_3:7021788-7021807 Msa0100560:CDS 35.0%
AGGTGCTCATAGAATCAAAA+GGG - chr1_3:7021808-7021827 Msa0100560:CDS 35.0%
! TAGTAGTGTGTGGAAAGTAT+GGG - chr1_3:7021831-7021850 Msa0100560:CDS 35.0%
!!! GAGACAATTTTTGCTGGTTT+TGG + chr1_3:7021890-7021909 None:intergenic 35.0%
! CTTAGAGAGACAATTTTTGC+TGG + chr1_3:7021896-7021915 None:intergenic 35.0%
AAAAATTGTCTCTCTAAGCG+AGG - chr1_3:7021898-7021917 Msa0100560:CDS 35.0%
AAAAACGAAATGGAGGAGAT+TGG - chr1_3:7021982-7022001 Msa0100560:CDS 35.0%
AAAACGAAATGGAGGAGATT+GGG - chr1_3:7021983-7022002 Msa0100560:CDS 35.0%
!! ATTGGGCTTTGGAAAAAGTT+TGG - chr1_3:7022000-7022019 Msa0100560:CDS 35.0%
!! TTGGGCTTTGGAAAAAGTTT+GGG - chr1_3:7022001-7022020 Msa0100560:CDS 35.0%
TTGCAAACTATTGTGTCTAC+AGG + chr1_3:7022073-7022092 None:intergenic 35.0%
! AACAAGCTCCAATGTTTCTA+TGG - chr1_3:7022096-7022115 Msa0100560:CDS 35.0%
AATATCACTCTGCCATTCAT+TGG + chr1_3:7022173-7022192 None:intergenic 35.0%
GCAGAGTGATATTGTCTATA+GGG - chr1_3:7022180-7022199 Msa0100560:CDS 35.0%
TTTCTGCTCTTAACCTTCAA+TGG + chr1_3:7022214-7022233 None:intergenic 35.0%
ATTTGATGTGAGTTCCTGTT+TGG - chr1_3:7022412-7022431 Msa0100560:intron 35.0%
AGGTGTTCTACAAGACAATT+TGG - chr1_3:7022453-7022472 Msa0100560:intron 35.0%
!! TTGATCCAAGATAATGGACT+TGG - chr1_3:7022773-7022792 Msa0100560:intron 35.0%
! ATATTTGGCATTTGGGTTTC+TGG + chr1_3:7023065-7023084 None:intergenic 35.0%
AATGCCTAGATTTCTCTTGT+TGG - chr1_3:7023192-7023211 Msa0100560:intron 35.0%
CTTTCTGTTGTGTTTGTCAA+AGG - chr1_3:7023303-7023322 Msa0100560:intron 35.0%
CTGTTAAGTTCACCATTGAT+TGG + chr1_3:7023329-7023348 None:intergenic 35.0%
TGGTGAACTTAACAGTTCAT+TGG - chr1_3:7023334-7023353 Msa0100560:intron 35.0%
! TCTTGTTTATTAGGTGCATC+AGG - chr1_3:7023449-7023468 Msa0100560:intron 35.0%
!!! TCTTTTGAGTTTGTTTGGCA+TGG + chr1_3:7023525-7023544 None:intergenic 35.0%
GCAGTAAAAAAAGCAAACCA+CGG + chr1_3:7023634-7023653 None:intergenic 35.0%
GGGCTGCCTATAAAAATAAA+AGG + chr1_3:7023685-7023704 None:intergenic 35.0%
CGAAAACTACCAAATAGCAA+CGG + chr1_3:7023778-7023797 None:intergenic 35.0%
!! GTCGTACTATTTCTGATGTT+AGG - chr1_3:7023797-7023816 Msa0100560:intron 35.0%
TCTGATGTTAGGAAATGTCT+CGG - chr1_3:7023808-7023827 Msa0100560:intron 35.0%
ATGTCTCGGTAGATTTCATT+TGG - chr1_3:7023822-7023841 Msa0100560:CDS 35.0%
! CGGTAGATTTCATTTGGAAT+TGG - chr1_3:7023828-7023847 Msa0100560:CDS 35.0%
TGTCTTCTATAGTCTAGACA+CGG - chr1_3:7024036-7024055 Msa0100560:intron 35.0%
AATGCTTCGCAACTTATCAT+GGG + chr1_3:7024142-7024161 None:intergenic 35.0%
AAATGCTTCGCAACTTATCA+TGG + chr1_3:7024143-7024162 None:intergenic 35.0%
! TGGTTTTTGAACCTTTATCG+TGG - chr1_3:7024187-7024206 Msa0100560:CDS 35.0%
!! AGTTCAAAGGCGTTTGTTAT+AGG + chr1_3:7024277-7024296 None:intergenic 35.0%
CTGTTGCTAAATGAAACTGA+GGG - chr1_3:7024307-7024326 Msa0100560:CDS 35.0%
CATATGCAGACTGATATTCA+GGG + chr1_3:7024387-7024406 None:intergenic 35.0%
TCATATGCAGACTGATATTC+AGG + chr1_3:7024388-7024407 None:intergenic 35.0%
AAAAGGAATTTACCTGTGCT+AGG - chr1_3:7024437-7024456 Msa0100560:CDS 35.0%
TCCGTTGTTATAGCATTATC+AGG - chr1_3:7024471-7024490 Msa0100560:CDS 35.0%
TGTTATAGCATTATCAGGAG+TGG - chr1_3:7024476-7024495 Msa0100560:CDS 35.0%
!!! TGGATTTTTCTAGGGTTACA+AGG - chr1_3:7024544-7024563 Msa0100560:CDS 35.0%
!!! GGATTTTTCTAGGGTTACAA+GGG - chr1_3:7024545-7024564 Msa0100560:CDS 35.0%
GTTGTCTAACATGAGAATCT+AGG - chr1_3:7024803-7024822 Msa0100560:CDS 35.0%
TGAGAATCTAGGTAAACTTG+TGG - chr1_3:7024814-7024833 Msa0100560:CDS 35.0%
!! AGTGTGTGTGTGTCATTTAT+AGG + chr1_3:7024902-7024921 None:intergenic 35.0%
CAGTAGAATAACAAAGAGCT+TGG - chr1_3:7025013-7025032 Msa0100560:CDS 35.0%
GCTTGGAAAAACTTAAGAAC+AGG - chr1_3:7025030-7025049 Msa0100560:CDS 35.0%
AGTCTTTCAATGCACTCTTA+GGG - chr1_3:7025359-7025378 Msa0100560:CDS 35.0%
! ATGCAGCATTATCTAGTTTC+TGG + chr1_3:7025567-7025586 None:intergenic 35.0%
TCATTCTAACTTGGAAGTCT+AGG + chr1_3:7025822-7025841 None:intergenic 35.0%
TCTGACTTCTCATTCTAACT+TGG + chr1_3:7025831-7025850 None:intergenic 35.0%
ACAATCTTAGGTAGGGAAAA+CGG + chr1_3:7025877-7025896 None:intergenic 35.0%
AGCCACAAGTTTACAATCTT+AGG + chr1_3:7025889-7025908 None:intergenic 35.0%
!!! GTTTAGTTTTCTCCAATGTG+TGG - chr1_3:7025978-7025997 Msa0100560:intron 35.0%
! CCCAATAGCATTTTGTTCTT+TGG - chr1_3:7026151-7026170 Msa0100560:intron 35.0%
CCCAAAGAACAAAATGCTAT+TGG + chr1_3:7026155-7026174 None:intergenic 35.0%
! GTATACAAATCTGGGATACA+TGG - chr1_3:7026293-7026312 Msa0100560:intron 35.0%
! ACTGAGAAGTATAAAGACCA+AGG + chr1_3:7026319-7026338 None:intergenic 35.0%
ATACTTCTCAGTGCATACAT+AGG - chr1_3:7026327-7026346 Msa0100560:intron 35.0%
TACTTCTCAGTGCATACATA+GGG - chr1_3:7026328-7026347 Msa0100560:intron 35.0%
ACACACATTTGCAATCATAG+TGG + chr1_3:7026399-7026418 None:intergenic 35.0%
CTATAGGTTGTAGAGTATGT+CGG - chr1_3:7026430-7026449 Msa0100560:intron 35.0%
GTCTATCTTAAAGAAGTAGC+AGG + chr1_3:7026533-7026552 None:intergenic 35.0%
AACATATAATAGATGCCACG+AGG - chr1_3:7026557-7026576 Msa0100560:intron 35.0%
!! TCATTGGTTGTAGTTTTCGT+AGG + chr1_3:7026802-7026821 None:intergenic 35.0%
ACTCAATTATATATAGCCGG+GGG - chr1_3:7027292-7027311 Msa0100560:intron 35.0%
! ACACAAGCTTTTTGATCTGT+TGG - chr1_3:7027484-7027503 Msa0100560:intron 35.0%
! CATCTTCTATTTAGTGCTGA+TGG - chr1_3:7027694-7027713 Msa0100560:intron 35.0%
TTTGTAGGTTGTCTTCTTTG+CGG - chr1_3:7027742-7027761 Msa0100560:intron 35.0%
! GAAAGAGTGTATGTGTGTAG+TGG + chr1_3:7014834-7014853 None:intergenic 40.0%
! TGTAATCATAGGTGTCGTGT+CGG + chr1_3:7015298-7015317 None:intergenic 40.0%
!! AAATATGGAAGCATTGCTGC+TGG + chr1_3:7015386-7015405 None:intergenic 40.0%
CATCATTCTCGAAATTGTGG+CGG + chr1_3:7015472-7015491 None:intergenic 40.0%
!!! TTTTTTGTCCTCCGTTGTTG+TGG - chr1_3:7015694-7015713 Msa0100560:intron 40.0%
! ATTGCAGAAGTGCAAAGCTT+CGG + chr1_3:7015747-7015766 None:intergenic 40.0%
AAGCTTTGCACTTCTGCAAT+TGG - chr1_3:7015747-7015766 Msa0100560:intron 40.0%
AGCTTTGCACTTCTGCAATT+GGG - chr1_3:7015748-7015767 Msa0100560:intron 40.0%
! TTGATTCTATAGAAAGCGCG+AGG - chr1_3:7015792-7015811 Msa0100560:intron 40.0%
TCATAACCTGCTAAGTCTCT+TGG - chr1_3:7015838-7015857 Msa0100560:intron 40.0%
AAGTTTCCAAGAGACTTAGC+AGG + chr1_3:7015847-7015866 None:intergenic 40.0%
! AGTCTCTTGGAAACTTTTCC+TGG - chr1_3:7015851-7015870 Msa0100560:intron 40.0%
ATTTATTCCGGGGCAATTGT+TGG - chr1_3:7015875-7015894 Msa0100560:intron 40.0%
TTTATTCCGGGGCAATTGTT+GGG - chr1_3:7015876-7015895 Msa0100560:intron 40.0%
ACTTCTTTGCCAACATTTCC+AGG - chr1_3:7015920-7015939 Msa0100560:CDS 40.0%
CAAACCTTATCCCACTAAGT+GGG - chr1_3:7016421-7016440 Msa0100560:CDS 40.0%
AAACCTTATCCCACTAAGTG+GGG - chr1_3:7016422-7016441 Msa0100560:CDS 40.0%
AGACGAATCGTGTGTATTCT+TGG - chr1_3:7016700-7016719 Msa0100560:intron 40.0%
CTTGATAAACATCCGATGGA+AGG + chr1_3:7016738-7016757 None:intergenic 40.0%
! ATACCTCAAGGTGCATCTTT+TGG - chr1_3:7016891-7016910 Msa0100560:intron 40.0%
GAAGTTAAGCAAACACTGGA+TGG - chr1_3:7017015-7017034 Msa0100560:intron 40.0%
TTCGGGAAATGAGAGTGAAT+GGG - chr1_3:7017068-7017087 Msa0100560:intron 40.0%
ACTGGATTTCATCAGATGGT+TGG + chr1_3:7017118-7017137 None:intergenic 40.0%
ATGCACTGGATTTCATCAGA+TGG + chr1_3:7017122-7017141 None:intergenic 40.0%
ATCTGCATCTGATATGTCGA+AGG - chr1_3:7017140-7017159 Msa0100560:intron 40.0%
TCTGCATCTGATATGTCGAA+GGG - chr1_3:7017141-7017160 Msa0100560:intron 40.0%
ATTCGGCTACAGTCACATTA+AGG - chr1_3:7017184-7017203 Msa0100560:intron 40.0%
TGACCATCCTCGTTTGATAT+CGG + chr1_3:7017297-7017316 None:intergenic 40.0%
GGTCACAATATTCCACTCAA+AGG - chr1_3:7017312-7017331 Msa0100560:intron 40.0%
! GAATCAAGGAAAGGAGGTAT+AGG + chr1_3:7017462-7017481 None:intergenic 40.0%
TTCAGAGAATCAAGGAAAGG+AGG + chr1_3:7017468-7017487 None:intergenic 40.0%
! CAGTCCTTTTCAGAGAATCA+AGG + chr1_3:7017476-7017495 None:intergenic 40.0%
CTTCCTCTAACATTGAGCTT+AGG - chr1_3:7017604-7017623 Msa0100560:intron 40.0%
AAGCCTAAGCTCAATGTTAG+AGG + chr1_3:7017610-7017629 None:intergenic 40.0%
TCTAACATTGAGCTTAGGCT+TGG - chr1_3:7017609-7017628 Msa0100560:intron 40.0%
GAACTGGCAAAGGTAAACAA+TGG + chr1_3:7017681-7017700 None:intergenic 40.0%
CACTATTAGTCATCTGCATC+AGG + chr1_3:7017719-7017738 None:intergenic 40.0%
! TTTGGGGCATTTCGAATGAA+CGG + chr1_3:7017918-7017937 None:intergenic 40.0%
ATGCCCCAAAACTATATGTC+TGG - chr1_3:7017928-7017947 Msa0100560:intron 40.0%
TGGTAAAAACAGTGAACTCG+TGG + chr1_3:7018007-7018026 None:intergenic 40.0%
!! CAAGCATTTGTTGTCCACTT+GGG + chr1_3:7018051-7018070 None:intergenic 40.0%
!! ACAAGCATTTGTTGTCCACT+TGG + chr1_3:7018052-7018071 None:intergenic 40.0%
GTATTCAGAATGCAGGTTCA+TGG + chr1_3:7018103-7018122 None:intergenic 40.0%
CAGTATCGTATTCAGAATGC+AGG + chr1_3:7018110-7018129 None:intergenic 40.0%
GGAAGGCAATCAAATGAATC+TGG - chr1_3:7018177-7018196 Msa0100560:CDS 40.0%
GCAATCAAATGAATCTGGAC+CGG - chr1_3:7018182-7018201 Msa0100560:CDS 40.0%
AGCTGTACTCCAGTTGTTAA+TGG - chr1_3:7018339-7018358 Msa0100560:intron 40.0%
TTTCCATCAGATACATCCGT+GGG - chr1_3:7018381-7018400 Msa0100560:intron 40.0%
TGCAGAGCTTGAAACAAGAT+AGG + chr1_3:7018505-7018524 None:intergenic 40.0%
GGGAATCTTGAGATTACTGA+TGG - chr1_3:7018786-7018805 Msa0100560:intron 40.0%
! TTCTTACTTGGCATGGATTG+TGG - chr1_3:7018883-7018902 Msa0100560:intron 40.0%
TTAATGGCTGTCTTTCTTGC+AGG - chr1_3:7018931-7018950 Msa0100560:intron 40.0%
!! CCCATCATTTTGAAGATCGT+AGG + chr1_3:7019037-7019056 None:intergenic 40.0%
!! AAAATGATGGGCCGTATTTG+AGG - chr1_3:7019046-7019065 Msa0100560:intron 40.0%
CAATCACCTCACCTCAAATA+CGG + chr1_3:7019060-7019079 None:intergenic 40.0%
GTCATAAGGATACTGTTAGC+TGG - chr1_3:7019095-7019114 Msa0100560:intron 40.0%
!!! CCTTACAAGCTGGTTTTGTA+AGG + chr1_3:7019344-7019363 None:intergenic 40.0%
CCTTACAAAACCAGCTTGTA+AGG - chr1_3:7019341-7019360 Msa0100560:CDS 40.0%
TAATCCCACATCGGATAGAT+AGG + chr1_3:7019405-7019424 None:intergenic 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + chr1_3:7019435-7019454 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + chr1_3:7019436-7019455 None:intergenic 40.0%
TGGAAATTCCGCCTTTATTG+CGG + chr1_3:7019518-7019537 None:intergenic 40.0%
AAAACCTTCCTATCTTCCAC+AGG - chr1_3:7019563-7019582 Msa0100560:CDS 40.0%
TACGAATGGAGTCCAGAAAT+AGG + chr1_3:7019674-7019693 None:intergenic 40.0%
ATGAAAGAAGTTACAGCAGG+GGG + chr1_3:7019746-7019765 None:intergenic 40.0%
CATGAAAGAAGTTACAGCAG+GGG + chr1_3:7019747-7019766 None:intergenic 40.0%
CACATGAAAGAAGTTACAGC+AGG + chr1_3:7019749-7019768 None:intergenic 40.0%
ATTGATCGTCAACAACACAG+AGG + chr1_3:7019818-7019837 None:intergenic 40.0%
AATGCCTTGAATGCACCAAA+GGG + chr1_3:7019847-7019866 None:intergenic 40.0%
TAATGCCTTGAATGCACCAA+AGG + chr1_3:7019848-7019867 None:intergenic 40.0%
CACCCAATACATCTACTCTA+AGG + chr1_3:7019909-7019928 None:intergenic 40.0%
! TATCTGTCATTACCGACTAG+TGG + chr1_3:7020015-7020034 None:intergenic 40.0%
!! CATTGATTCCTAGTGCATCT+CGG - chr1_3:7020105-7020124 Msa0100560:intron 40.0%
AATTCTTTCCGAGATGCACT+AGG + chr1_3:7020116-7020135 None:intergenic 40.0%
TTGTATCCCGAACACATTGA+TGG - chr1_3:7020174-7020193 Msa0100560:intron 40.0%
CTTCTTGGGATTCTCTTTGT+GGG - chr1_3:7020323-7020342 Msa0100560:intron 40.0%
AAATTGGCAGAGGCCAAAAA+GGG + chr1_3:7020467-7020486 None:intergenic 40.0%
TAAATTGGCAGAGGCCAAAA+AGG + chr1_3:7020468-7020487 None:intergenic 40.0%
CCATGAGAATCTAATCCACT+TGG + chr1_3:7020750-7020769 None:intergenic 40.0%
!! CCAAGTGGATTAGATTCTCA+TGG - chr1_3:7020747-7020766 Msa0100560:CDS 40.0%
CAGATGGCTACTGTATTTGA+AGG - chr1_3:7020858-7020877 Msa0100560:CDS 40.0%
ACTGTAGATCCTACAAATGC+TGG - chr1_3:7021047-7021066 Msa0100560:CDS 40.0%
TCTGGCATGGTTGATCATTT+AGG + chr1_3:7021211-7021230 None:intergenic 40.0%
!! AAGCCCTTGACTTTTTGAGA+TGG + chr1_3:7021329-7021348 None:intergenic 40.0%
CAAAAAGTCAAGGGCTTCAA+AGG - chr1_3:7021332-7021351 Msa0100560:CDS 40.0%
GAGAAATGAGGCAAGAATTC+CGG - chr1_3:7021367-7021386 Msa0100560:CDS 40.0%
TCCTCATCTGATAACCAGAA+TGG - chr1_3:7021416-7021435 Msa0100560:CDS 40.0%
! ACCATTCTGGTTATCAGATG+AGG + chr1_3:7021420-7021439 None:intergenic 40.0%
AACCAGAATGGTACAAGTAC+TGG - chr1_3:7021428-7021447 Msa0100560:CDS 40.0%
! ATCTTTGCTGGCTAGTTGAA+TGG + chr1_3:7021499-7021518 None:intergenic 40.0%
CCTTGTTAGATGATCTTTGC+TGG + chr1_3:7021511-7021530 None:intergenic 40.0%
CCAGCAAAGATCATCTAACA+AGG - chr1_3:7021508-7021527 Msa0100560:CDS 40.0%
AACTCAAGAACCATCACATG+AGG - chr1_3:7021742-7021761 Msa0100560:CDS 40.0%
! GAGGTGCTCATAGAATCAAA+AGG - chr1_3:7021807-7021826 Msa0100560:CDS 40.0%
ATCAAAAGGGTAGTAGTGTG+TGG - chr1_3:7021821-7021840 Msa0100560:CDS 40.0%
GTAGTAGTGTGTGGAAAGTA+TGG - chr1_3:7021830-7021849 Msa0100560:CDS 40.0%
! AGTAGTGTGTGGAAAGTATG+GGG - chr1_3:7021832-7021851 Msa0100560:CDS 40.0%
! TGGGACCATACTACATCTTT+TGG + chr1_3:7021936-7021955 None:intergenic 40.0%
! GTTAGTCTGGGTGTTTCAAT+CGG + chr1_3:7021959-7021978 None:intergenic 40.0%
!! TGGGCTTTGGAAAAAGTTTG+GGG - chr1_3:7022002-7022021 Msa0100560:CDS 40.0%
! AGCTCCAATGTTTCTATGGA+AGG - chr1_3:7022100-7022119 Msa0100560:CDS 40.0%
!!! TCTATGGAAGGTTTTGAGAG+TGG - chr1_3:7022112-7022131 Msa0100560:CDS 40.0%
GGCAGAGTGATATTGTCTAT+AGG - chr1_3:7022179-7022198 Msa0100560:CDS 40.0%
AATGACATGATATGGTGTGC+CGG - chr1_3:7022354-7022373 Msa0100560:CDS 40.0%
TTGTCAATAGCGGCATTTCA+AGG - chr1_3:7022574-7022593 Msa0100560:intron 40.0%
ACAGGAAAGAAGGAAGTAGA+AGG - chr1_3:7022673-7022692 Msa0100560:intron 40.0%
ATAGGCCAAGTCCATTATCT+TGG + chr1_3:7022781-7022800 None:intergenic 40.0%
AGCGAATAAATCTCAGGTCT+AGG - chr1_3:7022872-7022891 Msa0100560:intron 40.0%
GCGAATAAATCTCAGGTCTA+GGG - chr1_3:7022873-7022892 Msa0100560:intron 40.0%
! ATAAATCTCAGGTCTAGGGT+TGG - chr1_3:7022877-7022896 Msa0100560:intron 40.0%
AGCATCACACACTATGTTGT+CGG + chr1_3:7022926-7022945 None:intergenic 40.0%
TTGGAGTATGCAGAAGATCA+TGG - chr1_3:7023086-7023105 Msa0100560:intron 40.0%
TGGAGTATGCAGAAGATCAT+GGG - chr1_3:7023087-7023106 Msa0100560:intron 40.0%
TGCACCAACAAGAGAAATCT+AGG + chr1_3:7023199-7023218 None:intergenic 40.0%
GTTTGTCAAAGGCCAATCAA+TGG - chr1_3:7023314-7023333 Msa0100560:intron 40.0%
! ATTAAAGCATTACCCGAACG+AGG - chr1_3:7023483-7023502 Msa0100560:intron 40.0%
AAATTCTCAGTCCTGATCCA+AGG - chr1_3:7023597-7023616 Msa0100560:intron 40.0%
CCACGGAAATAATGAAACCT+TGG + chr1_3:7023617-7023636 None:intergenic 40.0%
CCAAGGTTTCATTATTTCCG+TGG - chr1_3:7023614-7023633 Msa0100560:intron 40.0%
CTTGATATATGCATGGGTGA+GGG + chr1_3:7023866-7023885 None:intergenic 40.0%
TGACACAAACACACAGACAT+AGG + chr1_3:7024062-7024081 None:intergenic 40.0%
TGGAAGGAAAGACAGATGAA+AGG + chr1_3:7024109-7024128 None:intergenic 40.0%
TTCATCTGTCTTTCCTTCCA+AGG - chr1_3:7024109-7024128 Msa0100560:CDS 40.0%
TTATCATGGGTACCAAACCT+TGG + chr1_3:7024129-7024148 None:intergenic 40.0%
GACTGCATATTCCACGATAA+AGG + chr1_3:7024201-7024220 None:intergenic 40.0%
ATATGCAGTCATTGAATGCC+TGG - chr1_3:7024211-7024230 Msa0100560:CDS 40.0%
CCTCAGTTTCATTTAGCAAC+AGG + chr1_3:7024309-7024328 None:intergenic 40.0%
CCTGTTGCTAAATGAAACTG+AGG - chr1_3:7024306-7024325 Msa0100560:CDS 40.0%
ATATGATCCTACCGATGTGA+TGG - chr1_3:7024402-7024421 Msa0100560:CDS 40.0%
TATGATCCTACCGATGTGAT+GGG - chr1_3:7024403-7024422 Msa0100560:CDS 40.0%
ATTGCAGTGCCTTAAAACCT+CGG - chr1_3:7024597-7024616 Msa0100560:CDS 40.0%
TCAACTGTTCATCCGGAATA+AGG + chr1_3:7024631-7024650 None:intergenic 40.0%
CAAGCATTCAACTGTTCATC+CGG + chr1_3:7024638-7024657 None:intergenic 40.0%
GTGCAAAAATTGCGTTCACA+AGG - chr1_3:7024671-7024690 Msa0100560:CDS 40.0%
TGTGGTACTTCTGTAGATTC+AGG - chr1_3:7024832-7024851 Msa0100560:CDS 40.0%
GATTCAGGTGGTAAACTTGT+AGG - chr1_3:7024847-7024866 Msa0100560:CDS 40.0%
CAGTCTTCAATGCACTCTTA+GGG - chr1_3:7025141-7025160 Msa0100560:intron 40.0%
GTACAAGAGTCAGTTAGACT+CGG - chr1_3:7025265-7025284 Msa0100560:CDS 40.0%
CAGTCTTTCAATGCACTCTT+AGG - chr1_3:7025358-7025377 Msa0100560:CDS 40.0%
TTTCAATGCACTCTTAGGGA+TGG - chr1_3:7025363-7025382 Msa0100560:CDS 40.0%
GTACAAGAGTCAGTTAGACT+CGG - chr1_3:7025265-7025284 Msa0100560:CDS 40.0%
CAATCTTAGGTAGGGAAAAC+GGG + chr1_3:7025876-7025895 None:intergenic 40.0%
! TACCAACGAGTTGACAACTA+TGG - chr1_3:7025915-7025934 Msa0100560:intron 40.0%
AACCATAGTTGTCAACTCGT+TGG + chr1_3:7025920-7025939 None:intergenic 40.0%
TTCTTCCTTCAACTGAACTG+CGG - chr1_3:7026054-7026073 Msa0100560:intron 40.0%
TAAGCTGCTTCGGGATAATT+TGG - chr1_3:7026176-7026195 Msa0100560:intron 40.0%
TGCTTGGTACAAACAAGTGA+AGG - chr1_3:7026253-7026272 Msa0100560:intron 40.0%
GCTTGGTACAAACAAGTGAA+GGG - chr1_3:7026254-7026273 Msa0100560:intron 40.0%
ACTTCTCAGTGCATACATAG+GGG - chr1_3:7026329-7026348 Msa0100560:intron 40.0%
AGAGTATGTCGGTGAAATTG+TGG - chr1_3:7026441-7026460 Msa0100560:intron 40.0%
GAGTATGTCGGTGAAATTGT+GGG - chr1_3:7026442-7026461 Msa0100560:intron 40.0%
TGAAATTGTGGGACAACGTA+TGG - chr1_3:7026453-7026472 Msa0100560:intron 40.0%
TATAATAGATGCCACGAGGA+AGG - chr1_3:7026561-7026580 Msa0100560:intron 40.0%
ATAATAGATGCCACGAGGAA+GGG - chr1_3:7026562-7026581 Msa0100560:intron 40.0%
! GCTTGTTAAGAGCTAGTTTG+AGG - chr1_3:7026728-7026747 Msa0100560:intron 40.0%
! TCGAGACTTCTAAAGGTCAT+TGG + chr1_3:7026818-7026837 None:intergenic 40.0%
! GCATTGATCGAGACTTCTAA+AGG + chr1_3:7026825-7026844 None:intergenic 40.0%
AATGTTGGACTATTGCCACA+TGG - chr1_3:7027033-7027052 Msa0100560:CDS 40.0%
ATGTTGGACTATTGCCACAT+GGG - chr1_3:7027034-7027053 Msa0100560:CDS 40.0%
CAATAACAAAATCCCCCATG+TGG + chr1_3:7027051-7027070 None:intergenic 40.0%
!! CACATGGGGGATTTTGTTAT+TGG - chr1_3:7027049-7027068 Msa0100560:exon 40.0%
GTACGTACATGGTTATCACA+AGG - chr1_3:7027314-7027333 Msa0100560:intron 40.0%
TTATCACAAGGCTACTTGTG+AGG - chr1_3:7027326-7027345 Msa0100560:intron 40.0%
ATCAAAAAGCTTGTGTGACC+GGG + chr1_3:7027480-7027499 None:intergenic 40.0%
GATCAAAAAGCTTGTGTGAC+CGG + chr1_3:7027481-7027500 None:intergenic 40.0%
GATCTGTTGGATACCATATG+AGG - chr1_3:7027497-7027516 Msa0100560:intron 40.0%
TCGTAAGTAATCTCTTCACC+AGG + chr1_3:7027782-7027801 None:intergenic 40.0%
ACACATGTTGCCTCTTTACA+TGG - chr1_3:7027967-7027986 Msa0100560:five_prime_UTR 40.0%
CACATGTTGCCTCTTTACAT+GGG - chr1_3:7027968-7027987 Msa0100560:five_prime_UTR 40.0%
! GAACTTTTGCCCATGTAAAG+AGG + chr1_3:7027980-7027999 None:intergenic 40.0%
CTTTACATGGGCAAAAGTTC+AGG - chr1_3:7027980-7027999 Msa0100560:five_prime_UTR 40.0%
!! TGGGCAAAAGTTCAGGTTTT+TGG - chr1_3:7027987-7028006 Msa0100560:five_prime_UTR 40.0%
!! GGGCAAAAGTTCAGGTTTTT+GGG - chr1_3:7027988-7028007 Msa0100560:five_prime_UTR 40.0%
! GTGTAGTGGGAGTGAAATGA+TGG + chr1_3:7014820-7014839 None:intergenic 45.0%
! GGATTGGATTGGATTCGATG+AGG + chr1_3:7014874-7014893 None:intergenic 45.0%
GAGATTGAAAACCCTGGGAT+CGG + chr1_3:7014895-7014914 None:intergenic 45.0%
GTCACGAGATTGAAAACCCT+GGG + chr1_3:7014900-7014919 None:intergenic 45.0%
TGTCACGAGATTGAAAACCC+TGG + chr1_3:7014901-7014920 None:intergenic 45.0%
GAACGAAGAAGATTGAAGCG+TGG + chr1_3:7014970-7014989 None:intergenic 45.0%
TTCGTTCCAGAGAAGCCTAA+AGG - chr1_3:7014983-7015002 Msa0100560:three_prime_UTR 45.0%
TATGAAGCATGGGCACTTCT+CGG - chr1_3:7015236-7015255 Msa0100560:intron 45.0%
GTGTTGTCAAATATCGGCCA+TGG - chr1_3:7015416-7015435 Msa0100560:intron 45.0%
CGCCACAATTTCGAGAATGA+TGG - chr1_3:7015470-7015489 Msa0100560:intron 45.0%
GGCCATCATTCTCGAAATTG+TGG + chr1_3:7015475-7015494 None:intergenic 45.0%
! TGCATCGACGAGAGAAAAAG+TGG - chr1_3:7015554-7015573 Msa0100560:intron 45.0%
GTTGTGGCAGTGTAATTTCC+TGG - chr1_3:7015710-7015729 Msa0100560:intron 45.0%
TCTGCAATTGGGAATGCTGT+TGG - chr1_3:7015759-7015778 Msa0100560:intron 45.0%
ATTGCCCCGGAATAAATACC+AGG + chr1_3:7015872-7015891 None:intergenic 45.0%
AACATTTCCAGGCAGTGAGA+GGG - chr1_3:7015931-7015950 Msa0100560:CDS 45.0%
TATGCAACTCCTTCTGTGAG+TGG - chr1_3:7016076-7016095 Msa0100560:intron 45.0%
ATGCAACTCCTTCTGTGAGT+GGG - chr1_3:7016077-7016096 Msa0100560:intron 45.0%
TCTGCATGGGAAAAAGTGAG+TGG - chr1_3:7016113-7016132 Msa0100560:intron 45.0%
CTGCATGGGAAAAAGTGAGT+GGG - chr1_3:7016114-7016133 Msa0100560:intron 45.0%
CTAAGCAATACTGGGCATCT+TGG - chr1_3:7016233-7016252 Msa0100560:intron 45.0%
! GTGGGATAAGGTTTGGTTGT+TGG + chr1_3:7016416-7016435 None:intergenic 45.0%
CCACTTAGTGGGATAAGGTT+TGG + chr1_3:7016423-7016442 None:intergenic 45.0%
CCAAACCTTATCCCACTAAG+TGG - chr1_3:7016420-7016439 Msa0100560:CDS 45.0%
TCCATTTAGCCCCACTTAGT+GGG + chr1_3:7016434-7016453 None:intergenic 45.0%
ATCCATTTAGCCCCACTTAG+TGG + chr1_3:7016435-7016454 None:intergenic 45.0%
TTGCAGCATTCAGGGTTACA+CGG - chr1_3:7016531-7016550 Msa0100560:CDS 45.0%
AATGCTGTTCGCATGGAAAG+CGG - chr1_3:7016567-7016586 Msa0100560:CDS 45.0%
ACACCAAAAGATGCACCTTG+AGG + chr1_3:7016897-7016916 None:intergenic 45.0%
AAGCAAATGGAATGCACGCT+CGG + chr1_3:7016922-7016941 None:intergenic 45.0%
CTTCGGGAAATGAGAGTGAA+TGG - chr1_3:7017067-7017086 Msa0100560:intron 45.0%
GAAATGAGAGTGAATGGGAC+TGG - chr1_3:7017073-7017092 Msa0100560:intron 45.0%
CATATCAGATGCAGATGCAC+TGG + chr1_3:7017136-7017155 None:intergenic 45.0%
AGGTCTGCATCAGCATTCTT+CGG + chr1_3:7017240-7017259 None:intergenic 45.0%
CAACCGATATCAAACGAGGA+TGG - chr1_3:7017291-7017310 Msa0100560:intron 45.0%
TGTATGACCAGGTGAAAAGC+CGG - chr1_3:7017361-7017380 Msa0100560:intron 45.0%
AGTTGAGCTCCAACGAAGTT+TGG + chr1_3:7017423-7017442 None:intergenic 45.0%
GTTGGAGCTCAACTGAATGA+TGG - chr1_3:7017429-7017448 Msa0100560:intron 45.0%
TGCATCAGGGAATGCAGTTT+CGG + chr1_3:7017705-7017724 None:intergenic 45.0%
GAAGAAAACCCTCCTAACTG+TGG - chr1_3:7017826-7017845 Msa0100560:intron 45.0%
! TTGGGGCATTTCGAATGAAC+GGG + chr1_3:7017917-7017936 None:intergenic 45.0%
CTTTCCATCAGATACATCCG+TGG - chr1_3:7018380-7018399 Msa0100560:intron 45.0%
! TAGCAAAGCATTTGCACCCA+CGG + chr1_3:7018400-7018419 None:intergenic 45.0%
CAAGTGATTGTTTCGTCCAG+AGG + chr1_3:7018442-7018461 None:intergenic 45.0%
TCCTACTTCACTGCAACAAC+AGG - chr1_3:7018536-7018555 Msa0100560:CDS 45.0%
CCTACTTCACTGCAACAACA+GGG - chr1_3:7018537-7018556 Msa0100560:CDS 45.0%
CTTAGATAACTCCGGCATCT+GGG + chr1_3:7018616-7018635 None:intergenic 45.0%
!! AACTATCTGGCTTTGCTCAC+TGG - chr1_3:7018817-7018836 Msa0100560:intron 45.0%
TGTATGTGTGTTTGTGTGCG+TGG + chr1_3:7019289-7019308 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG - chr1_3:7019346-7019365 Msa0100560:CDS 45.0%
AGAGTCCTATCTATCCGATG+TGG - chr1_3:7019397-7019416 Msa0100560:CDS 45.0%
GAGTCCTATCTATCCGATGT+GGG - chr1_3:7019398-7019417 Msa0100560:CDS 45.0%
! GGGTGGATTTAATCCCACAT+CGG + chr1_3:7019414-7019433 None:intergenic 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + chr1_3:7019434-7019453 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + chr1_3:7019437-7019456 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - chr1_3:7019434-7019453 Msa0100560:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - chr1_3:7019440-7019459 Msa0100560:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr1_3:7019445-7019464 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - chr1_3:7019443-7019462 Msa0100560:intron 45.0%
CTGCAATGAAGGCAAACCAA+AGG - chr1_3:7019466-7019485 Msa0100560:intron 45.0%
CAAACCAAAGGCCGCAATTT+AGG - chr1_3:7019478-7019497 Msa0100560:intron 45.0%
ACCCTTAGTCGCCTAAATTG+CGG + chr1_3:7019492-7019511 None:intergenic 45.0%
TCATCCTGTGGAAGATAGGA+AGG + chr1_3:7019570-7019589 None:intergenic 45.0%
!! ATGTCAGGGTTGGTCGAAAT+AGG + chr1_3:7019615-7019634 None:intergenic 45.0%
AGCAGTAAACATGTCAGGGT+TGG + chr1_3:7019625-7019644 None:intergenic 45.0%
CAGCAGCAGTAAACATGTCA+GGG + chr1_3:7019629-7019648 None:intergenic 45.0%
ACATGTTTACTGCTGCTGCT+TGG - chr1_3:7019631-7019650 Msa0100560:intron 45.0%
TGCTTGGCCTCTATTCAGTT+TGG - chr1_3:7019647-7019666 Msa0100560:intron 45.0%
TGAAAGAAGTTACAGCAGGG+GGG + chr1_3:7019745-7019764 None:intergenic 45.0%
!! GTGTCGATCCTTTGCTCTTT+TGG - chr1_3:7019766-7019785 Msa0100560:CDS 45.0%
GAGATGTGCCAAAAGAGCAA+AGG + chr1_3:7019777-7019796 None:intergenic 45.0%
ACAACACAGAGGCAGAATAG+AGG + chr1_3:7019807-7019826 None:intergenic 45.0%
ACGATCAATCAGCATCCCTT+TGG - chr1_3:7019829-7019848 Msa0100560:intron 45.0%
GAGTAGATGTATTGGGTGTC+TGG - chr1_3:7019911-7019930 Msa0100560:intron 45.0%
! GGCTGCTATTTGGAAGATGA+TGG + chr1_3:7019953-7019972 None:intergenic 45.0%
! CATTTATGTGGTTTGTCCCC+TGG - chr1_3:7019985-7020004 Msa0100560:intron 45.0%
GCTTCTTGGGATTCTCTTTG+TGG - chr1_3:7020322-7020341 Msa0100560:intron 45.0%
ATGGCTCTCATACACCTCAA+TGG - chr1_3:7020781-7020800 Msa0100560:CDS 45.0%
GATGGTTTCCTGATCTTGCT+TGG + chr1_3:7020816-7020835 None:intergenic 45.0%
TTCTGCTCCCGTTGTTTATC+AGG - chr1_3:7020989-7021008 Msa0100560:CDS 45.0%
ACAGAGGCCTGATAAACAAC+GGG + chr1_3:7020999-7021018 None:intergenic 45.0%
CACAGAGGCCTGATAAACAA+CGG + chr1_3:7021000-7021019 None:intergenic 45.0%
TGTTTATCAGGCCTCTGTGA+TGG - chr1_3:7021001-7021020 Msa0100560:CDS 45.0%
GAGGGGTCAGGAATTGATAA+AGG - chr1_3:7021095-7021114 Msa0100560:CDS 45.0%
GGTCAGGAATTGATAAAGGC+TGG - chr1_3:7021099-7021118 Msa0100560:CDS 45.0%
CAAGAATTCCGGATGCTTCA+TGG - chr1_3:7021378-7021397 Msa0100560:CDS 45.0%
TCAGATGAGGAAGAGATTCC+AGG + chr1_3:7021407-7021426 None:intergenic 45.0%
CTCCAGTACTTGTACCATTC+TGG + chr1_3:7021433-7021452 None:intergenic 45.0%
AAATGGAGGAGATTGGGCTT+TGG - chr1_3:7021989-7022008 Msa0100560:CDS 45.0%
GGGCATAGCTGTACAAAATC+TGG - chr1_3:7022022-7022041 Msa0100560:CDS 45.0%
! TAGGGCTGATTCTCCATTGA+AGG - chr1_3:7022198-7022217 Msa0100560:CDS 45.0%
GTGACCTACGTTGTCAATAG+CGG - chr1_3:7022564-7022583 Msa0100560:intron 45.0%
AATGCCGCTATTGACAACGT+AGG + chr1_3:7022571-7022590 None:intergenic 45.0%
TCAATAGCGGCATTTCAAGG+TGG - chr1_3:7022577-7022596 Msa0100560:intron 45.0%
ATTTCAAGGTGGAGTGGCAT+GGG - chr1_3:7022588-7022607 Msa0100560:intron 45.0%
GTAGTTGCAGACAGGAAAGA+AGG - chr1_3:7022663-7022682 Msa0100560:intron 45.0%
TTGGCATATGGACAGAGAGA+GGG + chr1_3:7023705-7023724 None:intergenic 45.0%
TTTGGCATATGGACAGAGAG+AGG + chr1_3:7023706-7023725 None:intergenic 45.0%
GCTTGATATATGCATGGGTG+AGG + chr1_3:7023867-7023886 None:intergenic 45.0%
CTGTCTTTCCTTCCAAGGTT+TGG - chr1_3:7024114-7024133 Msa0100560:CDS 45.0%
ACTACTCAAAGTGAGTTGCC+AGG + chr1_3:7024232-7024251 None:intergenic 45.0%
CAGGTTCTGCAGAAGTTCAA+AGG + chr1_3:7024290-7024309 None:intergenic 45.0%
TATGGAAGATGTGGGCTTCA+TGG - chr1_3:7024355-7024374 Msa0100560:CDS 45.0%
AGATGTGGGCTTCATGGTAT+TGG - chr1_3:7024361-7024380 Msa0100560:CDS 45.0%
ATTTACCTGTGCTAGGACAG+AGG - chr1_3:7024444-7024463 Msa0100560:CDS 45.0%
AAATACCTCTGTCCTAGCAC+AGG + chr1_3:7024452-7024471 None:intergenic 45.0%
CATTATCAGGAGTGGAGTGT+GGG - chr1_3:7024484-7024503 Msa0100560:CDS 45.0%
ATTATCAGGAGTGGAGTGTG+GGG - chr1_3:7024485-7024504 Msa0100560:CDS 45.0%
TTGCAGTGCCTTAAAACCTC+GGG - chr1_3:7024598-7024617 Msa0100560:CDS 45.0%
CGGATGAACAGTTGAATGCT+TGG - chr1_3:7024636-7024655 Msa0100560:CDS 45.0%
CAGATATTGAGCGTGATCCT+CGG - chr1_3:7024714-7024733 Msa0100560:CDS 45.0%
AGATATTGAGCGTGATCCTC+GGG - chr1_3:7024715-7024734 Msa0100560:CDS 45.0%
ATGCAACTTGAACATACCCG+AGG + chr1_3:7024734-7024753 None:intergenic 45.0%
GGTACTTCTGTAGATTCAGG+TGG - chr1_3:7024835-7024854 Msa0100560:CDS 45.0%
CTGCAGAGTCTGTTAACTGT+TGG - chr1_3:7025065-7025084 Msa0100560:intron 45.0%
CTGCTACTGATGTAAGAGCA+AGG + chr1_3:7025093-7025112 None:intergenic 45.0%
TAGCAGTTCACGTCTAAGCA+AGG - chr1_3:7025107-7025126 Msa0100560:intron 45.0%
GCAGTCTTCAATGCACTCTT+AGG - chr1_3:7025140-7025159 Msa0100560:intron 45.0%
CATTAGCTCATACCCCAACA+TGG - chr1_3:7025630-7025649 Msa0100560:CDS 45.0%
CTAAACCGCAGTTCAGTTGA+AGG + chr1_3:7026062-7026081 None:intergenic 45.0%
CTTCAACTGAACTGCGGTTT+AGG - chr1_3:7026060-7026079 Msa0100560:intron 45.0%
!! TTCTTTGGGGTAAGCTGCTT+CGG - chr1_3:7026166-7026185 Msa0100560:intron 45.0%
! AAATCTGGGATACATGGCCT+TGG - chr1_3:7026299-7026318 Msa0100560:intron 45.0%
GTGCATACATAGGGGTAGAA+TGG - chr1_3:7026337-7026356 Msa0100560:intron 45.0%
TAATAGATGCCACGAGGAAG+GGG - chr1_3:7026563-7026582 Msa0100560:intron 45.0%
!! ATCACTTTTGCCGCGCAATT+TGG + chr1_3:7026926-7026945 None:intergenic 45.0%
CGGCAAAAGTGATTACTGTC+AGG - chr1_3:7026933-7026952 Msa0100560:CDS 45.0%
TGTTGGACTATTGCCACATG+GGG - chr1_3:7027035-7027054 Msa0100560:exon 45.0%
!! TAAAATCAAAATTTATTATA+AGG - chr1_3:7015609-7015628 Msa0100560:intron 5.0%
!!! AATATCTAAATTTAAAATAT+AGG + chr1_3:7022391-7022410 None:intergenic 5.0%
!!! TAAATAAGTATTTAATTTTT+TGG - chr1_3:7026769-7026788 Msa0100560:CDS 5.0%
!!! TAAACTATAATTTTTTAATA+TGG + chr1_3:7027097-7027116 None:intergenic 5.0%
ATCCAATCCAATCCGATCCC+AGG - chr1_3:7014880-7014899 Msa0100560:three_prime_UTR 50.0%
TCCAATCCAATCCGATCCCA+GGG - chr1_3:7014881-7014900 Msa0100560:three_prime_UTR 50.0%
TGAAAACCCTGGGATCGGAT+TGG + chr1_3:7014890-7014909 None:intergenic 50.0%
GCGAAGCTCGATGGATGAAA+TGG + chr1_3:7014948-7014967 None:intergenic 50.0%
CCTGAACCTTTAGGCTTCTC+TGG + chr1_3:7014992-7015011 None:intergenic 50.0%
CCAGAGAAGCCTAAAGGTTC+AGG - chr1_3:7014989-7015008 Msa0100560:exon 50.0%
! CATGCGCGTTCTGTGTTTTC+CGG - chr1_3:7015065-7015084 Msa0100560:CDS 50.0%
!! ATGGAAGCATTGCTGCTGGT+TGG + chr1_3:7015382-7015401 None:intergenic 50.0%
TCAGCCATCGATATCTGCCA+TGG + chr1_3:7015436-7015455 None:intergenic 50.0%
GAGAGCCAAACTCTGGCATA+CGG + chr1_3:7015496-7015515 None:intergenic 50.0%
TTACACTGCCACAACAACGG+AGG + chr1_3:7015705-7015724 None:intergenic 50.0%
ATTGGGAATGCTGTTGGCCA+TGG - chr1_3:7015765-7015784 Msa0100560:intron 50.0%
! GAAAGCGCGAGGATACAAAC+AGG - chr1_3:7015803-7015822 Msa0100560:intron 50.0%
ACTCATCCCAACAATTGCCC+CGG + chr1_3:7015885-7015904 None:intergenic 50.0%
GCAATTGTTGGGATGAGTGG+TGG - chr1_3:7015887-7015906 Msa0100560:intron 50.0%
CTCTCACTGCCTGGAAATGT+TGG + chr1_3:7015932-7015951 None:intergenic 50.0%
CAACATTTCCAGGCAGTGAG+AGG - chr1_3:7015930-7015949 Msa0100560:CDS 50.0%
TGTGTTACAAGCCCTGCTTC+CGG - chr1_3:7015986-7016005 Msa0100560:intron 50.0%
TAGCCCCACTTAGTGGGATA+AGG + chr1_3:7016428-7016447 None:intergenic 50.0%
TCCCACTAAGTGGGGCTAAA+TGG - chr1_3:7016430-7016449 Msa0100560:CDS 50.0%
CAACTTCTGCCACTGTGCAA+TGG + chr1_3:7016598-7016617 None:intergenic 50.0%
TCCTTCGCTAGTCCTTCCAT+CGG - chr1_3:7016723-7016742 Msa0100560:intron 50.0%
GCAGAACAACCTGTATGACC+AGG - chr1_3:7017350-7017369 Msa0100560:intron 50.0%
! GGCTTTTCACCTGGTCATAC+AGG + chr1_3:7017362-7017381 None:intergenic 50.0%
! TCACTATCCGGCTTTTCACC+TGG + chr1_3:7017371-7017390 None:intergenic 50.0%
ACACCTGCACCAAACTTCGT+TGG - chr1_3:7017411-7017430 Msa0100560:intron 50.0%
! TTAGGCTTGGTCAACCACCT+TGG - chr1_3:7017622-7017641 Msa0100560:intron 50.0%
! TAGGCTTGGTCAACCACCTT+GGG - chr1_3:7017623-7017642 Msa0100560:intron 50.0%
CAGTTTCGGAGAACTGGCAA+AGG + chr1_3:7017691-7017710 None:intergenic 50.0%
GGAATGCAGTTTCGGAGAAC+TGG + chr1_3:7017697-7017716 None:intergenic 50.0%
AACTACAGACCTTAGCAGGG+AGG - chr1_3:7017861-7017880 Msa0100560:intron 50.0%
GGGACAGCTGTTCCATTTGT+AGG - chr1_3:7018468-7018487 Msa0100560:CDS 50.0%
CCCTGTTGTTGCAGTGAAGT+AGG + chr1_3:7018540-7018559 None:intergenic 50.0%
GCTTAGATAACTCCGGCATC+TGG + chr1_3:7018617-7018636 None:intergenic 50.0%
AAGGCTTCAGTACCTGAGCT+GGG - chr1_3:7018717-7018736 Msa0100560:intron 50.0%
! CCACAAGTCCCCCTATTTTG+GGG + chr1_3:7018768-7018787 None:intergenic 50.0%
! CCCACAAGTCCCCCTATTTT+GGG + chr1_3:7018769-7018788 None:intergenic 50.0%
CCCAAAATAGGGGGACTTGT+GGG - chr1_3:7018766-7018785 Msa0100560:intron 50.0%
! TCCCACAAGTCCCCCTATTT+TGG + chr1_3:7018770-7018789 None:intergenic 50.0%
TGTGTTTGTGTGCGTGGTAG+GGG + chr1_3:7019283-7019302 None:intergenic 50.0%
GTGTGTTTGTGTGCGTGGTA+GGG + chr1_3:7019284-7019303 None:intergenic 50.0%
TGTGTGTTTGTGTGCGTGGT+AGG + chr1_3:7019285-7019304 None:intergenic 50.0%
GCCGCAATTTAGGCGACTAA+GGG - chr1_3:7019488-7019507 Msa0100560:intron 50.0%
GCAATTTAGGCGACTAAGGG+TGG - chr1_3:7019491-7019510 Msa0100560:intron 50.0%
CTAAGGGTGGACCGCAATAA+AGG - chr1_3:7019504-7019523 Msa0100560:intron 50.0%
CGTGTCATCCTGTGGAAGAT+AGG + chr1_3:7019574-7019593 None:intergenic 50.0%
CCAGAAAACGTGTCATCCTG+TGG + chr1_3:7019582-7019601 None:intergenic 50.0%
! CCACAGGATGACACGTTTTC+TGG - chr1_3:7019579-7019598 Msa0100560:CDS 50.0%
!! GGATGACACGTTTTCTGGAG+AGG - chr1_3:7019584-7019603 Msa0100560:CDS 50.0%
GCAGCAGCAGTAAACATGTC+AGG + chr1_3:7019630-7019649 None:intergenic 50.0%
AAAGAAGTTACAGCAGGGGG+GGG + chr1_3:7019743-7019762 None:intergenic 50.0%
GAAAGAAGTTACAGCAGGGG+GGG + chr1_3:7019744-7019763 None:intergenic 50.0%
! GCATCCCTTTGGTGCATTCA+AGG - chr1_3:7019840-7019859 Msa0100560:intron 50.0%
ACAGTGGCATGGCTGCTATT+TGG + chr1_3:7019963-7019982 None:intergenic 50.0%
! TACCGACTAGTGGAGTACCA+GGG + chr1_3:7020005-7020024 None:intergenic 50.0%
! TTACCGACTAGTGGAGTACC+AGG + chr1_3:7020006-7020025 None:intergenic 50.0%
CTTGGCACATCTCTCCATTG+AGG + chr1_3:7020798-7020817 None:intergenic 50.0%
GAGATGTGCCAAGCAAGATC+AGG - chr1_3:7020805-7020824 Msa0100560:CDS 50.0%
AGGACAAGACAGTGCTCAAG+CGG - chr1_3:7020878-7020897 Msa0100560:CDS 50.0%
!! GGAAGCCTTGTTGAAAGAGC+AGG - chr1_3:7020941-7020960 Msa0100560:CDS 50.0%
TTATCAGGCCTCTGTGATGG+AGG - chr1_3:7021004-7021023 Msa0100560:CDS 50.0%
TGAGAAACTTGTGCGTGACG+AGG - chr1_3:7021076-7021095 Msa0100560:CDS 50.0%
GAGAAACTTGTGCGTGACGA+GGG - chr1_3:7021077-7021096 Msa0100560:CDS 50.0%
AGAAACTTGTGCGTGACGAG+GGG - chr1_3:7021078-7021097 Msa0100560:CDS 50.0%
AATGGTTGAGCCTGCAAACG+CGG + chr1_3:7021156-7021175 None:intergenic 50.0%
CGTTTGCAGGCTCAACCATT+GGG - chr1_3:7021156-7021175 Msa0100560:CDS 50.0%
TCATCAAGGAGACTCTGGCA+TGG + chr1_3:7021224-7021243 None:intergenic 50.0%
GTCTGGGTGTTTCAATCGGT+GGG + chr1_3:7021955-7021974 None:intergenic 50.0%
AGTCTGGGTGTTTCAATCGG+TGG + chr1_3:7021956-7021975 None:intergenic 50.0%
CATTTCAAGGTGGAGTGGCA+TGG - chr1_3:7022587-7022606 Msa0100560:intron 50.0%
!! TAGGTGCATCAGGCTTGCTA+TGG - chr1_3:7023459-7023478 Msa0100560:intron 50.0%
ACAACACCAACGACCTCGTT+CGG + chr1_3:7023499-7023518 None:intergenic 50.0%
! TATGCATGGGTGAGGGTACA+AGG + chr1_3:7023859-7023878 None:intergenic 50.0%
CATGGGTACCAAACCTTGGA+AGG + chr1_3:7024125-7024144 None:intergenic 50.0%
GGCTGCTTCCAACGTTTCAT+TGG - chr1_3:7024167-7024186 Msa0100560:CDS 50.0%
GCATTATCAGGAGTGGAGTG+TGG - chr1_3:7024483-7024502 Msa0100560:CDS 50.0%
TTATCAGGAGTGGAGTGTGG+GGG - chr1_3:7024486-7024505 Msa0100560:CDS 50.0%
TGCAGTGCCTTAAAACCTCG+GGG - chr1_3:7024599-7024618 Msa0100560:CDS 50.0%
! GCATACACCCCGAGGTTTTA+AGG + chr1_3:7024609-7024628 None:intergenic 50.0%
! TCGGGGTGTATGCCTTATTC+CGG - chr1_3:7024616-7024635 Msa0100560:CDS 50.0%
ACGTCTAAGCAAGGCTTACC+AGG - chr1_3:7025116-7025135 Msa0100560:intron 50.0%
AGTGCATTGAAGACTGCTCC+TGG + chr1_3:7025137-7025156 None:intergenic 50.0%
GCACTCTTAGGGATGTAGAG+TGG - chr1_3:7025152-7025171 Msa0100560:CDS 50.0%
CTCGGTGACTAACTTCTGAC+AGG - chr1_3:7025283-7025302 Msa0100560:CDS 50.0%
CTCGGTGACTAACTTCTGAC+AGG - chr1_3:7025283-7025302 Msa0100560:CDS 50.0%
AGCTCATACCCCAACATGGA+TGG - chr1_3:7025634-7025653 Msa0100560:CDS 50.0%
! TCTAGGGCTCCATCCATGTT+GGG + chr1_3:7025646-7025665 None:intergenic 50.0%
TGTGACCAGTGGCTACTCTA+GGG + chr1_3:7025662-7025681 None:intergenic 50.0%
GCATTTCATTAGGCCAGCCA+TGG + chr1_3:7025703-7025722 None:intergenic 50.0%
CTGTCATGTCTGCCACACAT+TGG + chr1_3:7025993-7026012 None:intergenic 50.0%
CAATGTGTGGCAGACATGAC+AGG - chr1_3:7025991-7026010 Msa0100560:intron 50.0%
!! TCTTTGGGGTAAGCTGCTTC+GGG - chr1_3:7026167-7026186 Msa0100560:intron 50.0%
GGTACAAACAAGTGAAGGGC+TGG - chr1_3:7026258-7026277 Msa0100560:intron 50.0%
GGGGTAGAATGGTACAACAC+TGG - chr1_3:7026348-7026367 Msa0100560:intron 50.0%
AATAGATGCCACGAGGAAGG+GGG - chr1_3:7026564-7026583 Msa0100560:intron 50.0%
ATGTGGACAGCCAAATTGCG+CGG - chr1_3:7026913-7026932 Msa0100560:CDS 50.0%
TACTGTCAGGCGTCTGAAGA+AGG - chr1_3:7026946-7026965 Msa0100560:CDS 50.0%
GTTGGACTATTGCCACATGG+GGG - chr1_3:7027036-7027055 Msa0100560:exon 50.0%
GATAACCATGTACGTACCCC+CGG + chr1_3:7027311-7027330 None:intergenic 50.0%
TCACAAGGCTACTTGTGAGG+AGG - chr1_3:7027329-7027348 Msa0100560:intron 50.0%
AAAAGCTTGTGTGACCGGGA+GGG + chr1_3:7027476-7027495 None:intergenic 50.0%
AAAAAGCTTGTGTGACCGGG+AGG + chr1_3:7027477-7027496 None:intergenic 50.0%
AGGTTGTCTTCTTTGCGGAG+AGG - chr1_3:7027747-7027766 Msa0100560:intron 50.0%
GGTTGTCTTCTTTGCGGAGA+GGG - chr1_3:7027748-7027767 Msa0100560:intron 50.0%
GCGGAGAGGGATATATTACC+TGG - chr1_3:7027761-7027780 Msa0100560:intron 50.0%
! ACCCTGGGATCGGATTGGAT+TGG + chr1_3:7014885-7014904 None:intergenic 55.0%
TCGGCCATGGCAGATATCGA+TGG - chr1_3:7015429-7015448 Msa0100560:intron 55.0%
GATGGCCGTATGCCAGAGTT+TGG - chr1_3:7015488-7015507 Msa0100560:intron 55.0%
!! TGATGATGGATGGCGGACCA+TGG + chr1_3:7015521-7015540 None:intergenic 55.0%
GCTTCGGATCAGACAACTCC+AGG + chr1_3:7015731-7015750 None:intergenic 55.0%
GGGGCAATTGTTGGGATGAG+TGG - chr1_3:7015884-7015903 Msa0100560:intron 55.0%
CTTCTGTGAGTGGGTGTCCT+CGG - chr1_3:7016086-7016105 Msa0100560:intron 55.0%
TTCTGTGAGTGGGTGTCCTC+GGG - chr1_3:7016087-7016106 Msa0100560:intron 55.0%
TGTCCTCGGGTCTTCTGCAT+GGG - chr1_3:7016100-7016119 Msa0100560:intron 55.0%
TTTCCCATGCAGAAGACCCG+AGG + chr1_3:7016106-7016125 None:intergenic 55.0%
! AGGGTTACACGGTGTCAACC+CGG - chr1_3:7016542-7016561 Msa0100560:CDS 55.0%
TCCATGCGAACAGCATTCCC+CGG + chr1_3:7016564-7016583 None:intergenic 55.0%
! TCCGATGGAAGGACTAGCGA+AGG + chr1_3:7016727-7016746 None:intergenic 55.0%
!! GCTCCAACGAAGTTTGGTGC+AGG + chr1_3:7017417-7017436 None:intergenic 55.0%
TCAACTGGATCTCCAGCCCA+AGG + chr1_3:7017642-7017661 None:intergenic 55.0%
TACAGACCTTAGCAGGGAGG+AGG - chr1_3:7017864-7017883 Msa0100560:intron 55.0%
GCAATTCCTCCTCCCTGCTA+AGG + chr1_3:7017873-7017892 None:intergenic 55.0%
GCACCCACGGATGTATCTGA+TGG + chr1_3:7018387-7018406 None:intergenic 55.0%
! GCTTGCATTGACCCAGATGC+CGG - chr1_3:7018602-7018621 Msa0100560:intron 55.0%
CAAGGCTTCAGTACCTGAGC+TGG - chr1_3:7018716-7018735 Msa0100560:intron 55.0%
GTACCTGAGCTGGGTTCTTC+TGG - chr1_3:7018726-7018745 Msa0100560:intron 55.0%
CCCCAAAATAGGGGGACTTG+TGG - chr1_3:7018765-7018784 Msa0100560:intron 55.0%
! GATGGGCCGTATTTGAGGTG+AGG - chr1_3:7019051-7019070 Msa0100560:intron 55.0%
GTGTTTGTGTGCGTGGTAGG+GGG + chr1_3:7019282-7019301 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+TGG + chr1_3:7019354-7019373 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr1_3:7019431-7019450 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - chr1_3:7019455-7019474 Msa0100560:intron 55.0%
GTCGCCTAAATTGCGGCCTT+TGG + chr1_3:7019485-7019504 None:intergenic 55.0%
GGCCGCAATTTAGGCGACTA+AGG - chr1_3:7019487-7019506 Msa0100560:intron 55.0%
AGGGTGGACCGCAATAAAGG+CGG - chr1_3:7019507-7019526 Msa0100560:CDS 55.0%
GGGGGGAAAGGCAGTCTATT+AGG + chr1_3:7019704-7019723 None:intergenic 55.0%
AAGAAGTTACAGCAGGGGGG+GGG + chr1_3:7019742-7019761 None:intergenic 55.0%
TCCCCTGGTACTCCACTAGT+CGG - chr1_3:7020000-7020019 Msa0100560:intron 55.0%
! ACCGACTAGTGGAGTACCAG+GGG + chr1_3:7020004-7020023 None:intergenic 55.0%
GGACAAGACAGTGCTCAAGC+GGG - chr1_3:7020879-7020898 Msa0100560:CDS 55.0%
CTTGTTCGCCTCCATCACAG+AGG + chr1_3:7021015-7021034 None:intergenic 55.0%
! CTCTGTGATGGAGGCGAACA+AGG - chr1_3:7021013-7021032 Msa0100560:CDS 55.0%
! GAAACAAGTGCCGCGTTTGC+AGG - chr1_3:7021143-7021162 Msa0100560:CDS 55.0%
GCGTTTGCAGGCTCAACCAT+TGG - chr1_3:7021155-7021174 Msa0100560:CDS 55.0%
! CCAGGAAGCCATGAAGCATC+CGG + chr1_3:7021389-7021408 None:intergenic 55.0%
GCGGAGTTTCACACGTTACC+TGG - chr1_3:7021659-7021678 Msa0100560:CDS 55.0%
AGCGGCATTTCAAGGTGGAG+TGG - chr1_3:7022582-7022601 Msa0100560:intron 55.0%
GCGCTGTTGTAGTTGCAGAC+AGG - chr1_3:7022655-7022674 Msa0100560:intron 55.0%
CATTACCCGAACGAGGTCGT+TGG - chr1_3:7023490-7023509 Msa0100560:intron 55.0%
CAACACCAACGACCTCGTTC+GGG + chr1_3:7023498-7023517 None:intergenic 55.0%
CTCTCGACTGCCCATCACAT+CGG + chr1_3:7024416-7024435 None:intergenic 55.0%
GATGGGCAGTCGAGAGGAAA+AGG - chr1_3:7024420-7024439 Msa0100560:CDS 55.0%
TATCAGGAGTGGAGTGTGGG+GGG - chr1_3:7024487-7024506 Msa0100560:CDS 55.0%
GGGTTACAAGGGCCGTAGAT+TGG - chr1_3:7024556-7024575 Msa0100560:CDS 55.0%
GGAATAAGGCATACACCCCG+AGG + chr1_3:7024617-7024636 None:intergenic 55.0%
CTAGGGCTCCATCCATGTTG+GGG + chr1_3:7025645-7025664 None:intergenic 55.0%
!! CTCTAGGGCTCCATCCATGT+TGG + chr1_3:7025647-7025666 None:intergenic 55.0%
CTGTGACCAGTGGCTACTCT+AGG + chr1_3:7025663-7025682 None:intergenic 55.0%
!! CTGCATCCGTTCTGAAGCCA+TGG - chr1_3:7025683-7025702 Msa0100560:CDS 55.0%
!! ATCCGTTCTGAAGCCATGGC+TGG - chr1_3:7025687-7025706 Msa0100560:CDS 55.0%
ATAGATGCCACGAGGAAGGG+GGG - chr1_3:7026565-7026584 Msa0100560:intron 55.0%
! TATAGCCGGGGGTACGTACA+TGG - chr1_3:7027303-7027322 Msa0100560:intron 55.0%
GCTACTTGTGAGGAGGAGCT+TGG - chr1_3:7027336-7027355 Msa0100560:intron 55.0%
TATTTAGCTACCCCCCCTCC+CGG - chr1_3:7027459-7027478 Msa0100560:intron 55.0%
AAAGCTTGTGTGACCGGGAG+GGG + chr1_3:7027475-7027494 None:intergenic 55.0%
TGAAGCGTGGCGAAGCTCGA+TGG + chr1_3:7014957-7014976 None:intergenic 60.0%
GCATGGGCACTTCTCGGACT+AGG - chr1_3:7015242-7015261 Msa0100560:intron 60.0%
! TTCTCGGACTAGGCGTGTCC+CGG - chr1_3:7015252-7015271 Msa0100560:intron 60.0%
ACATACGCGTGTCAGACCCC+GGG + chr1_3:7015273-7015292 None:intergenic 60.0%
CACATACGCGTGTCAGACCC+CGG + chr1_3:7015274-7015293 None:intergenic 60.0%
! CATGGCGGAGAGCCAAACTC+TGG + chr1_3:7015503-7015522 None:intergenic 60.0%
!! CAGAGTTTGGCTCTCCGCCA+TGG - chr1_3:7015501-7015520 Msa0100560:intron 60.0%
!! TGATGGATGGCGGACCATGG+CGG + chr1_3:7015518-7015537 None:intergenic 60.0%
TTCCAGGCAGTGAGAGGGCA+AGG - chr1_3:7015936-7015955 Msa0100560:CDS 60.0%
TCCAGGCAGTGAGAGGGCAA+GGG - chr1_3:7015937-7015956 Msa0100560:CDS 60.0%
CGAGGACACCCACTCACAGA+AGG + chr1_3:7016088-7016107 None:intergenic 60.0%
GTGTCCTCGGGTCTTCTGCA+TGG - chr1_3:7016099-7016118 Msa0100560:intron 60.0%
! GGGTTACACGGTGTCAACCC+GGG - chr1_3:7016543-7016562 Msa0100560:CDS 60.0%
! GGTTACACGGTGTCAACCCG+GGG - chr1_3:7016544-7016563 Msa0100560:CDS 60.0%
CCATGCGAACAGCATTCCCC+GGG + chr1_3:7016563-7016582 None:intergenic 60.0%
GCGGAGAGACCATTGCACAG+TGG - chr1_3:7016586-7016605 Msa0100560:CDS 60.0%
CTTGGTCAACCACCTTGGGC+TGG - chr1_3:7017627-7017646 Msa0100560:intron 60.0%
ACTGGATCTCCAGCCCAAGG+TGG + chr1_3:7017639-7017658 None:intergenic 60.0%
GCACCAGAAGAACCCAGCTC+AGG + chr1_3:7018732-7018751 None:intergenic 60.0%
AGAAGTTACAGCAGGGGGGG+GGG + chr1_3:7019741-7019760 None:intergenic 60.0%
CCGGATGCTTCATGGCTTCC+TGG - chr1_3:7021386-7021405 Msa0100560:CDS 60.0%
ATGCCACACCACCGTATGCG+GGG + chr1_3:7022623-7022642 None:intergenic 60.0%
CATGCCACACCACCGTATGC+GGG + chr1_3:7022624-7022643 None:intergenic 60.0%
CCATGCCACACCACCGTATG+CGG + chr1_3:7022625-7022644 None:intergenic 60.0%
CGACTGCCCATCACATCGGT+AGG + chr1_3:7024412-7024431 None:intergenic 60.0%
!! CGATGTGATGGGCAGTCGAG+AGG - chr1_3:7024414-7024433 Msa0100560:CDS 60.0%
TGGAGCCCTAGAGTAGCCAC+TGG - chr1_3:7025654-7025673 Msa0100560:CDS 60.0%
ACGGATGCAGCTGTGACCAG+TGG + chr1_3:7025673-7025692 None:intergenic 60.0%
GGCCAGCCATGGCTTCAGAA+CGG + chr1_3:7025692-7025711 None:intergenic 60.0%
TAGATGCCACGAGGAAGGGG+GGG - chr1_3:7026566-7026585 Msa0100560:intron 60.0%
AAGCTTGTGTGACCGGGAGG+GGG + chr1_3:7027474-7027493 None:intergenic 60.0%
! TCTCGGACTAGGCGTGTCCC+GGG - chr1_3:7015253-7015272 Msa0100560:intron 65.0%
TCCCTTGCCCTCTCACTGCC+TGG + chr1_3:7015941-7015960 None:intergenic 65.0%
CCCGGGGAATGCTGTTCGCA+TGG - chr1_3:7016560-7016579 Msa0100560:CDS 65.0%
AAGTTACAGCAGGGGGGGGG+GGG + chr1_3:7019739-7019758 None:intergenic 65.0%
GAAGTTACAGCAGGGGGGGG+GGG + chr1_3:7019740-7019759 None:intergenic 65.0%
CTTGTGCGTGACGAGGGGTC+AGG - chr1_3:7021083-7021102 Msa0100560:CDS 65.0%
TGCCACACCACCGTATGCGG+GGG + chr1_3:7022622-7022641 None:intergenic 65.0%
CCGCATACGGTGGTGTGGCA+TGG - chr1_3:7022622-7022641 Msa0100560:intron 65.0%
GGAGTGGAGTGTGGGGGGAT+TGG - chr1_3:7024492-7024511 Msa0100560:CDS 65.0%
AGCTTGTGTGACCGGGAGGG+GGG + chr1_3:7027473-7027492 None:intergenic 65.0%
! CTCGGACTAGGCGTGTCCCG+GGG - chr1_3:7015254-7015273 Msa0100560:intron 70.0%
AGTTACAGCAGGGGGGGGGG+GGG + chr1_3:7019738-7019757 None:intergenic 70.0%
GGAGTAGCCGCCCCCGCATA+CGG - chr1_3:7022609-7022628 Msa0100560:intron 70.0%
CACACCACCGTATGCGGGGG+CGG + chr1_3:7022619-7022638 None:intergenic 70.0%
AGCGATCCCCCCCTTCCTCG+TGG + chr1_3:7026575-7026594 None:intergenic 70.0%
GCTTGTGTGACCGGGAGGGG+GGG + chr1_3:7027472-7027491 None:intergenic 70.0%
TTACAGCAGGGGGGGGGGGG+GGG + chr1_3:7019736-7019755 None:intergenic 75.0%
GTTACAGCAGGGGGGGGGGG+GGG + chr1_3:7019737-7019756 None:intergenic 75.0%
GTAGCCGCCCCCGCATACGG+TGG - chr1_3:7022612-7022631 Msa0100560:intron 75.0%
CGCCCCCGCATACGGTGGTG+TGG - chr1_3:7022617-7022636 Msa0100560:intron 75.0%
! TACAGCAGGGGGGGGGGGGG+GGG + chr1_3:7019735-7019754 None:intergenic 80.0%
! ACAGCAGGGGGGGGGGGGGG+GGG + chr1_3:7019734-7019753 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGGAA+AGG + chr1_3:7019716-7019735 None:intergenic 90.0%
! AGCAGGGGGGGGGGGGGGGG+GGG + chr1_3:7019732-7019751 None:intergenic 90.0%
! CAGCAGGGGGGGGGGGGGGG+GGG + chr1_3:7019733-7019752 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019729-7019748 None:intergenic 95.0%
! CAGGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019730-7019749 None:intergenic 95.0%
! GCAGGGGGGGGGGGGGGGGG+GGG + chr1_3:7019731-7019750 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7014802 7028084 7014802 ID=Msa0100560;Name=Msa0100560
chr1_3 mRNA 7014802 7028084 7014802 ID=Msa0100560-mRNA-1;Parent=Msa0100560;Name=Msa0100560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=322|0.86|0.87|1|0.93|0.93|16|201|1676
chr1_3 exon 7014802 7015137 7014802 ID=Msa0100560-mRNA-1:exon:2744;Parent=Msa0100560-mRNA-1
chr1_3 exon 7015919 7015963 7015919 ID=Msa0100560-mRNA-1:exon:2743;Parent=Msa0100560-mRNA-1
chr1_3 exon 7016268 7016450 7016268 ID=Msa0100560-mRNA-1:exon:2742;Parent=Msa0100560-mRNA-1
chr1_3 exon 7016528 7016641 7016528 ID=Msa0100560-mRNA-1:exon:2741;Parent=Msa0100560-mRNA-1
chr1_3 exon 7018150 7018329 7018150 ID=Msa0100560-mRNA-1:exon:2740;Parent=Msa0100560-mRNA-1
chr1_3 exon 7018421 7018582 7018421 ID=Msa0100560-mRNA-1:exon:2739;Parent=Msa0100560-mRNA-1
chr1_3 exon 7019338 7019424 7019338 ID=Msa0100560-mRNA-1:exon:2738;Parent=Msa0100560-mRNA-1
chr1_3 exon 7019507 7019627 7019507 ID=Msa0100560-mRNA-1:exon:2737;Parent=Msa0100560-mRNA-1
chr1_3 exon 7019748 7019820 7019748 ID=Msa0100560-mRNA-1:exon:2736;Parent=Msa0100560-mRNA-1
chr1_3 exon 7020612 7022389 7020612 ID=Msa0100560-mRNA-1:exon:2735;Parent=Msa0100560-mRNA-1
chr1_3 exon 7023819 7023933 7023819 ID=Msa0100560-mRNA-1:exon:2734;Parent=Msa0100560-mRNA-1
chr1_3 exon 7024079 7025056 7024079 ID=Msa0100560-mRNA-1:exon:2733;Parent=Msa0100560-mRNA-1
chr1_3 exon 7025151 7025826 7025151 ID=Msa0100560-mRNA-1:exon:2732;Parent=Msa0100560-mRNA-1
chr1_3 exon 7026579 7026667 7026579 ID=Msa0100560-mRNA-1:exon:2731;Parent=Msa0100560-mRNA-1
chr1_3 exon 7026759 7027166 7026759 ID=Msa0100560-mRNA-1:exon:2730;Parent=Msa0100560-mRNA-1
chr1_3 exon 7027876 7028084 7027876 ID=Msa0100560-mRNA-1:exon:2729;Parent=Msa0100560-mRNA-1
chr1_3 five_prime_UTR 7027876 7028084 7027876 ID=Msa0100560-mRNA-1:five_prime_utr;Parent=Msa0100560-mRNA-1
chr1_3 five_prime_UTR 7027054 7027166 7027054 ID=Msa0100560-mRNA-1:five_prime_utr;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7026759 7027053 7026759 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7026579 7026667 7026579 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7025151 7025826 7025151 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7024079 7025056 7024079 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7023819 7023933 7023819 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7020612 7022389 7020612 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7019748 7019820 7019748 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7019507 7019627 7019507 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7019338 7019424 7019338 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7018421 7018582 7018421 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7018150 7018329 7018150 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7016528 7016641 7016528 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7016268 7016450 7016268 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7015919 7015963 7015919 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 CDS 7015003 7015137 7015003 ID=Msa0100560-mRNA-1:cds;Parent=Msa0100560-mRNA-1
chr1_3 three_prime_UTR 7014802 7015002 7014802 ID=Msa0100560-mRNA-1:three_prime_utr;Parent=Msa0100560-mRNA-1
Gene Sequence

>Msa0100560

ATGAATCATAACCTGCTAAGTCTCTTGGAAACTTTTCCTGGTATTTATTCCGGGGCAATTGTTGGGATGAGTGGTGGTAGTAATACTACTTCTTTGCCAACATTTCCAGGCAGTGAGAGGGCAAGGGAATCTTTTTCTTCTAGAGGGCAATTCTGTGTTACAAGCCCTGCTTCCGGTTTAAATTTTTGGAGCTCAAATATGCAATCGACATCAAAATCGGCTTTTGAATGCTTCTCAGCTAAGTATGCAACTCCTTCTGTGAGTGGGTGTCCTCGGGTCTTCTGCATGGGAAAAAGTGGCCATCTTCTTCTAAGCAATACTGGGCATCTTGGTATTGTTTGCTCATGTCACTGTTGCCACATGTCTATACTCAAGTTTTGTGAGATTATATCTTCGGGAAATGAGAGTGAATGGGACTGGCCAGAAGTATTTTCAACAACCAACCATCTGATGAAATCCAGTGCATCTGCATCTGATATGTCGAAGGGTGATTTCTCAAATATTCTGAATTCGGCTACAGTCACATTAAGGTCTGAAAAGTTTTCTGACTACGTTATGTTTCCGAAGAATGCTGATGCAGACCTCAATTTATTTTTTGGTGCATTGTCCAGAAAACAACCGATATCAAACGAGGATGGTCACAATATTCCACTCAAAGGTTTAAACGCTTTTACGCAGAACAACCTGTATGACCAGGTGAAAAGCCGGATAGTGAAATCTAATATGGCTATTTGTACACCTGCACCAAACTTCGTTGGAGCTCAACTGAATGATGGTTGTCAGCCTATACCTCCTTTCCTTGATTCTCTGAAAAGGACTGAATACTTGCCAATTACCCAGTCTACACAAATTCCAACAAACATTCTAAAAGAGCATGAATGTACCAAAAAGAAGAATGTAAAGACTGGTCTACTAGGAAAAGATGTAACTTCCTCTAACATTGAGCTTAGGCTTGGTCAACCACCTTGGGCTGGAGATCCAGTTGATTCGTTTGTAGAATCACCATTGTTTACCTTTGCCAGTTCTCCGAAACTGCATTCCCTGATGCAGATGACTAATAAAAACCCTCCTAACTGTGGATTTTGTTTATTAACTACAGACCTTAGCAGGGAGGAGGAATTGCAGAATAGTTTTAGTCGTGCTGCCCGTTCATTCGAAATGCCCCAAAACTATATGTCTGGATGTAGTATTAATTCAGATGCTGCTATAGCTAGTTCACAAACTGACAATGTGACCACGAGTTCACTGTTTTTACCATTTCCACAATTTAGTTCTCAACCCAAGTGGACAACAAATGCTTGTAAAAATTTGGTGAATGGTGGTATAATGCCCATGAACCTGCATTCTGAATACGATACTGTGCAATTTGGTTCTTCTAATGTTGACTGGAATAGTAATGGTCACAAAGGAAGGCAATCAAATGAATCTGGACCGGAATTCAATAAATATTTGGACAATGATAATGGTGAAAGGTTTGGTGAAGATTCCTGTACCAAAGTAAATTCTGGATTTGAAGTAAATCAGTTCATGGAATTTGGCTCTATCAGAAGAACTATTGATGGTAGTGGTAGCTGTACTCCAGTTGTTAATGGAAAGATATATGAATCATGCTTTCCATCAGATACATCCGTGGGTGCAAATGCTTTGCTAGCCTCAAAAAATGTATCTTCCTCTGGACGAAACAATCACTTGACTTTGGGGACAGCTGTTCCATTTGTAGGAAAGAGTCTTTCCTATCTTGTTTCAAGCTCTGCATCAAATCAAAATCCTACTTCACTGCAACAACAGGGTATTAATATGGATACTTGCATGATTGATCAAAATACAAGGTTGCTTGCATTGACCCAGATGCCGGAGTTATCTAAGCAACAACAAGCTTTGTATTTTCATGATATGAATCAAAAGCTAGGGAATTCAGGTATTGCAGAACCCCAGAACTATATATACAAGGCTTCAGTACCTGAGCTGGGTTCTTCTGGTGCATCATTGAAATTTCCCCAAAATAGGGGGACTTGTGGGAATCTTGAGATTACTGATGGTTTGAACAGATATCGTGATTTCTCTACCTTAACACCAACACCTTTACAATCTAAACAAAAGGAATCGCAATGTAAAAATTCCTACGATCTTCAAAATGATGGGCCGTATTTGAGCCTTGGAATGAACAATACCAGATCAAGTAGAAAATGCTCTGAGAAACAATCAGATGTATATTTGTTAGGCAAATATGTTAGTGCTGCTAGAGAAAATTGTTGCAGAAACAATGTTGGCACTGAAATTGGACCCTCTTGTGATACTGCAAAAGAAAAGTATGCAGATGTTAATGGTGTGACCTCTTTTAAGATAGCTTCAGAGTGTGGTAGAGATCAGAGTGCTCTGAAGAATAAAAATATCTACTTCGATCCAAGTGGATTAGATTCTCATGGCACAGTAAAAAATGGCTCTCATACACCTCAATGGAGAGATGTGCCAAGCAAGATCAGGAAACCATCATGTGATACAACATTTTTAGATCAGATGGCTACTGTATTTGAAGGACAAGACAGTGCTCAAGCGGGAAACATTTCTGCCAAACCTTTGAACAGAATTATTGGTACGGAAGCCTTGTTGAAAGAGCAGGATTTTTTTTATGTTTCTTCTGGATGTTCTGCTCCCGTTGTTTATCAGGCCTCTGTGATGGAGGCGAACAAGGTTAATTCTTATACTGTAGATCCTACAAATGCTGGTTGTATTGAGAAACTTGTGCGTGACGAGGGGTCAGGAATTGATAAAGGCTGGTCATCTGATTTGATTGAAAGTGAAACAAGTGCCGCGTTTGCAGGCTCAACCATTGGGAGTGACTTGAAAAAAGGTTATCTGAGAATCCTAAATGATCAACCATGCCAGAGTCTCCTTGATGATATTAAACTGTTGGATTCTTTGATTTGGAAGAAAAGGCAGGACCAAAATCATATAATAGTTAGTGCTAATTGTAGAACCAATCCATCTCAAAAAGTCAAGGGCTTCAAAGGAAAAAAGCAAAAGAGAAATGAGGCAAGAATTCCGGATGCTTCATGGCTTCCTGGAATCTCTTCCTCATCTGATAACCAGAATGGTACAAGTACTGGAGCTTTTGATTCTCCTTCTAGTTTATCTGAAGAAATGCAATTTTACCATTCAACTAGCCAGCAAAGATCATCTAACAAGGCTTATATTGTTCAACCTAATACTAATCACAGACTCTCTTCATTTCCATCTGAATTTCCCTCTTGTAAGAATCGTCTAAACAAGCGTTACAGCGATGAAGATAGCTACGAGTCAGAATCAAATTTGGATGCGGAGTTTCACACGTTACCTGGAATTTCTAGAATAAAGAAATCAAGGAAGGATTTAACTTCTGATTTCTTCGGACAATTTCAAACTCAAGAACCATCACATGAGGAACCTAATAATGCTAAGCAGATATCATCTTCTAGCATAAAAGGAGGTGCTCATAGAATCAAAAGGGTAGTAGTGTGTGGAAAGTATGGGGAAATATGTAGTGAATTATCAATTACAGAAGTACCAAAACCAGCAAAAATTGTCTCTCTAAGCGAGGTCCTTAGAACTTCCAAAAGATGTAGTATGGTCCCACCGATTGAAACACCCAGACTAACTACAAAAACGAAATGGAGGAGATTGGGCTTTGGAAAAAGTTTGGGGCATAGCTGTACAAAATCTGGTTTAAAAGCTAAGAAGGATAACAAACCTGTAGACACAATAGTTTGCAATGAAACAAGCTCCAATGTTTCTATGGAAGGTTTTGAGAGTGGCAGCAAGCAAAATGTTTACAAACAGAAGAAAGATACCAATGAATGGCAGAGTGATATTGTCTATAGGGCTGATTCTCCATTGAAGGTTAAGAGCAGAAAAATTCGGAAACAGCGCAGCATTAATGAAATCACTGCTAAAGAAACCCAAATGCCAAATATTTTGGAGTATGCAGAAGATCATGGGCATGATTTGTGTAACAAAAGAAGTAAAATCTCTGTTCAAGAACACCCAAACATGTCCTTCATTAATTCAGTTTCTTTCTGTTGTGTTTGTCAAAGGCCAATCAATGGTGAACTTAACAGTTCATTGGAGTGTAGTAAATGTCTAATTAAAGTGCATCAGGCTTGCTATGGTATTAAAGCATTACCCGAACGAGGTCGTTGGTGTTGTAGACCATGCCAAACAAACTCAAAAGATATGAACCTGTTGCTAAATGAAACTGAGGGAATTAATGACGAGAAAGTTGAATTTTATGGAAGATGTGGGCTTCATGGTATTGGCCCTGAATATCAGTCTGCATATGATCCTACCGATGTGATGGGCAGTCGAGAGGAAAAGGAATTTACCTGTGCTAGGACAGAGGGTTACAAGGGCCGTAGATTGGATGATGTCTATAATAATCATTGCAGTGCCTTAAAACCTCGGGGTGTATGCCTTATTCCGGATGAACAGTTGAATGCTTGGATTCACATAAATGTGCAAAAATTGCGTTCACAAGGAATTCCAAAATTTCTATATTCAGATATTGAGCGTGATCCTCGGAAAGAATATGCTTGGTACAAACAAGTGAAGGGCTGGAAAAATCTTGTTGTATACAAATCTGGGATACATGGCCTTGGTCTTTATACTTCTCAGTGCATACATAGGGGTAGAATGGTTGTAGAGTATGTCGGTGAAATTGTGGGACAACGTATGGCTGATAAAAGAGAGATTGAATACATATCTGGAAGGAAGCTTCAGTACAGAAGTGCCTGCTACTTCTTTAAGATAGACAAAGAACATATAATAGATGCCACGAGGAAGGGGGGGATCGCTCGATTTGTTAACCATTCATGTCTGCCAAATTGCGCGGCAAAAGTGATTACTGTCAGGCGTCTGAAGAAGGTTGTCTTCTTTGCGGAGAGGGATATATTACCTGGTGAAGAGATTACTTACGATTACAACTTTAACCGAGAAGATGAAGAAAAGAAAATTCCATGTTATTGCAATTCAAAAAATTGCAGGCGCTCTCTGAACTGA
Protein sequence

>Msa0100560

MNHNLLSLLETFPGIYSGAIVGMSGGSNTTSLPTFPGSERARESFSSRGQFCVTSPASGLNFWSSNMQSTSKSAFECFSAKYATPSVSGCPRVFCMGKSGHLLLSNTGHLGIVCSCHCCHMSILKFCEIISSGNESEWDWPEVFSTTNHLMKSSASASDMSKGDFSNILNSATVTLRSEKFSDYVMFPKNADADLNLFFGALSRKQPISNEDGHNIPLKGLNAFTQNNLYDQVKSRIVKSNMAICTPAPNFVGAQLNDGCQPIPPFLDSLKRTEYLPITQSTQIPTNILKEHECTKKKNVKTGLLGKDVTSSNIELRLGQPPWAGDPVDSFVESPLFTFASSPKLHSLMQMTNKNPPNCGFCLLTTDLSREEELQNSFSRAARSFEMPQNYMSGCSINSDAAIASSQTDNVTTSSLFLPFPQFSSQPKWTTNACKNLVNGGIMPMNLHSEYDTVQFGSSNVDWNSNGHKGRQSNESGPEFNKYLDNDNGERFGEDSCTKVNSGFEVNQFMEFGSIRRTIDGSGSCTPVVNGKIYESCFPSDTSVGANALLASKNVSSSGRNNHLTLGTAVPFVGKSLSYLVSSSASNQNPTSLQQQGINMDTCMIDQNTRLLALTQMPELSKQQQALYFHDMNQKLGNSGIAEPQNYIYKASVPELGSSGASLKFPQNRGTCGNLEITDGLNRYRDFSTLTPTPLQSKQKESQCKNSYDLQNDGPYLSLGMNNTRSSRKCSEKQSDVYLLGKYVSAARENCCRNNVGTEIGPSCDTAKEKYADVNGVTSFKIASECGRDQSALKNKNIYFDPSGLDSHGTVKNGSHTPQWRDVPSKIRKPSCDTTFLDQMATVFEGQDSAQAGNISAKPLNRIIGTEALLKEQDFFYVSSGCSAPVVYQASVMEANKVNSYTVDPTNAGCIEKLVRDEGSGIDKGWSSDLIESETSAAFAGSTIGSDLKKGYLRILNDQPCQSLLDDIKLLDSLIWKKRQDQNHIIVSANCRTNPSQKVKGFKGKKQKRNEARIPDASWLPGISSSSDNQNGTSTGAFDSPSSLSEEMQFYHSTSQQRSSNKAYIVQPNTNHRLSSFPSEFPSCKNRLNKRYSDEDSYESESNLDAEFHTLPGISRIKKSRKDLTSDFFGQFQTQEPSHEEPNNAKQISSSSIKGGAHRIKRVVVCGKYGEICSELSITEVPKPAKIVSLSEVLRTSKRCSMVPPIETPRLTTKTKWRRLGFGKSLGHSCTKSGLKAKKDNKPVDTIVCNETSSNVSMEGFESGSKQNVYKQKKDTNEWQSDIVYRADSPLKVKSRKIRKQRSINEITAKETQMPNILEYAEDHGHDLCNKRSKISVQEHPNMSFINSVSFCCVCQRPINGELNSSLECSKCLIKVHQACYGIKALPERGRWCCRPCQTNSKDMNLLLNETEGINDEKVEFYGRCGLHGIGPEYQSAYDPTDVMGSREEKEFTCARTEGYKGRRLDDVYNNHCSALKPRGVCLIPDEQLNAWIHINVQKLRSQGIPKFLYSDIERDPRKEYAWYKQVKGWKNLVVYKSGIHGLGLYTSQCIHRGRMVVEYVGEIVGQRMADKREIEYISGRKLQYRSACYFFKIDKEHIIDATRKGGIARFVNHSCLPNCAAKVITVRRLKKVVFFAERDILPGEEITYDYNFNREDEEKKIPCYCNSKNCRRSLN*