AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0107500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0107500 MtrunA17_Chr1g0164211 76.077 418 38 3 1 356 78 495 0.0 618
Msa0107500 MtrunA17_Chr8g0356001 47.506 421 157 5 1 357 88 508 1.74e-128 382
Msa0107500 MtrunA17_Chr1g0205361 49.639 415 147 4 1 353 81 495 1.13e-125 374
Msa0107500 MtrunA17_Chr4g0039901 48.551 414 150 5 1 351 82 495 2.84e-125 373
Msa0107500 MtrunA17_Chr1g0160851 48.086 418 155 4 1 356 81 498 2.39e-122 365
Msa0107500 MtrunA17_Chr5g0395321 45.131 421 174 5 1 365 89 508 7.52e-121 363
Msa0107500 MtrunA17_Chr5g0395331 44.681 423 167 5 1 356 84 506 1.86e-118 356
Msa0107500 MtrunA17_Chr8g0355961 47.268 421 158 5 1 357 88 508 5.75e-117 352
Msa0107500 MtrunA17_Chr1g0205371 48.449 419 154 3 1 357 82 500 1.65e-114 345
Msa0107500 MtrunA17_Chr5g0395381 44.784 393 173 6 1 356 89 474 1.76e-108 329
Msa0107500 MtrunA17_Chr2g0314731 43.810 420 159 7 1 357 80 485 9.93e-107 325
Msa0107500 MtrunA17_Chr2g0314721 43.333 420 161 7 1 357 91 496 2.75e-106 324
Msa0107500 MtrunA17_Chr1g0176831 41.667 420 168 7 1 357 110 515 4.45e-102 314
Msa0107500 MtrunA17_Chr1g0160861 50.000 332 100 6 89 356 10 339 4.71e-96 293
Msa0107500 MtrunA17_Chr1g0197871 39.855 414 177 6 1 353 81 483 6.95e-95 295
Msa0107500 MtrunA17_Chr7g0246221 39.234 418 182 7 1 348 81 496 5.63e-94 293
Msa0107500 MtrunA17_Chr1g0197851 40.852 399 174 5 1 338 81 478 1.51e-93 291
Msa0107500 MtrunA17_Chr1g0197891 40.852 399 174 5 1 338 81 478 2.39e-93 291
Msa0107500 MtrunA17_Chr1g0197881 40.852 399 174 5 1 338 80 477 6.85e-93 290
Msa0107500 MtrunA17_Chr7g0246151 38.129 417 187 7 1 348 81 495 1.73e-87 276
Msa0107500 MtrunA17_Chr7g0246121 37.650 417 187 6 1 348 81 493 5.92e-87 275
Msa0107500 MtrunA17_Chr1g0200961 37.619 420 194 6 2 353 76 495 1.19e-79 255
Msa0107500 MtrunA17_Chr7g0246181 37.831 415 191 5 1 348 81 495 1.59e-79 255
Msa0107500 MtrunA17_Chr7g0246131 38.129 417 189 5 1 348 81 497 1.06e-78 253
Msa0107500 MtrunA17_Chr5g0405001 34.396 439 188 13 1 355 91 513 6.38e-68 225
Msa0107500 MtrunA17_Chr3g0094231 33.649 422 206 10 2 355 84 499 9.44e-66 219
Msa0107500 MtrunA17_Chr8g0372251 33.638 437 195 12 1 355 82 505 1.34e-65 219
Msa0107500 MtrunA17_Chr7g0265611 33.175 422 208 8 3 352 95 514 2.59e-65 218
Msa0107500 MtrunA17_Chr3g0086691 33.105 438 214 9 2 363 80 514 6.33e-64 215
Msa0107500 MtrunA17_Chr3g0086661 32.877 438 215 8 2 363 80 514 1.70e-62 211
Msa0107500 MtrunA17_Chr4g0061381 32.093 430 211 8 2 355 79 503 4.92e-62 209
Msa0107500 MtrunA17_Chr3g0094171 33.254 421 205 11 2 351 88 503 2.40e-61 208
Msa0107500 MtrunA17_Chr3g0086651 32.420 438 217 8 2 363 80 514 3.31e-61 207
Msa0107500 MtrunA17_Chr8g0362481 30.254 433 212 11 2 355 14 435 1.20e-60 204
Msa0107500 MtrunA17_Chr4g0057001 30.189 424 220 10 1 355 97 513 4.20e-59 202
Msa0107500 MtrunA17_Chr4g0056951 31.294 425 215 11 1 355 91 508 6.25e-59 201
Msa0107500 MtrunA17_Chr1g0174441 29.930 431 225 10 1 358 103 529 2.09e-58 201
Msa0107500 MtrunA17_Chr8g0362701 30.682 440 213 13 2 361 83 510 8.90e-58 198
Msa0107500 MtrunA17_Chr3g0116681 30.144 418 220 10 1 351 87 499 1.04e-56 195
Msa0107500 MtrunA17_Chr1g0174451 30.047 426 223 10 1 355 84 505 1.06e-56 196
Msa0107500 MtrunA17_Chr1g0213671 34.038 426 206 9 1 353 82 505 1.88e-56 195
Msa0107500 MtrunA17_Chr1g0174471 30.556 432 213 13 2 355 98 520 4.86e-56 194
Msa0107500 MtrunA17_Chr7g0258221 29.812 426 224 7 2 355 82 504 5.07e-55 191
Msa0107500 MtrunA17_Chr1g0174461 28.972 428 225 11 1 355 83 504 5.80e-55 191
Msa0107500 MtrunA17_Chr4g0035921 31.494 435 213 13 1 355 84 513 6.73e-55 191
Msa0107500 MtrunA17_Chr8g0344181 33.017 421 207 11 2 351 86 502 1.79e-54 189
Msa0107500 MtrunA17_Chr8g0344151 30.361 415 220 9 2 348 84 497 7.40e-54 188
Msa0107500 MtrunA17_Chr1g0176851 44.017 234 98 4 40 240 1 234 2.63e-53 178
Msa0107500 MtrunA17_Chr1g0174481 28.935 432 229 9 2 362 82 506 3.11e-53 186
Msa0107500 MtrunA17_Chr3g0101721 29.665 418 226 9 1 352 85 500 4.44e-53 186
Msa0107500 MtrunA17_Chr4g0058281 29.147 422 228 8 1 353 93 512 5.99e-53 186
Msa0107500 MtrunA17_Chr7g0224551 30.162 431 222 11 2 355 80 508 6.33e-53 186
Msa0107500 MtrunA17_Chr6g0484841 29.673 428 225 10 1 357 84 506 6.50e-53 185
Msa0107500 MtrunA17_Chr7g0224561 29.930 431 223 11 2 355 80 508 1.95e-52 184
Msa0107500 MtrunA17_Chr3g0116741 29.078 423 224 10 1 353 98 514 3.68e-52 183
Msa0107500 MtrunA17_Chr5g0430081 29.412 425 226 12 1 355 82 502 3.68e-52 183
Msa0107500 MtrunA17_Chr5g0445461 28.436 422 227 12 1 355 87 500 1.22e-51 182
Msa0107500 MtrunA17_Chr4g0030701 29.318 440 222 10 1 355 82 517 1.26e-51 182
Msa0107500 MtrunA17_Chr3g0101711 28.266 421 231 7 1 353 85 502 1.68e-51 181
Msa0107500 MtrunA17_Chr3g0084921 29.252 441 214 11 1 355 82 510 1.18e-50 179
Msa0107500 MtrunA17_Chr4g0047691 29.621 422 223 12 1 354 99 514 1.39e-50 179
Msa0107500 MtrunA17_Chr2g0314781 48.087 183 51 3 202 354 1 169 2.32e-50 169
Msa0107500 MtrunA17_Chr4g0020041 27.830 424 237 7 1 358 85 505 3.77e-50 178
Msa0107500 MtrunA17_Chr4g0058261 28.538 424 235 9 1 356 111 534 1.21e-49 177
Msa0107500 MtrunA17_Chr4g0046331 29.977 437 225 13 2 359 84 518 3.37e-49 176
Msa0107500 MtrunA17_Chr5g0430131 27.945 433 229 10 1 359 84 507 3.47e-49 175
Msa0107500 MtrunA17_Chr5g0445451 27.896 423 228 13 1 355 87 500 1.52e-48 173
Msa0107500 MtrunA17_Chr4g0058231 28.704 432 215 9 1 351 75 494 1.85e-48 173
Msa0107500 MtrunA17_Chr3g0101671 30.000 420 225 10 1 353 86 503 2.60e-48 173
Msa0107500 MtrunA17_Chr5g0445421 28.230 418 212 11 1 355 161 553 3.04e-48 174
Msa0107500 MtrunA17_Chr3g0101621 31.010 416 215 14 1 352 81 488 4.65e-48 172
Msa0107500 MtrunA17_Chr5g0403321 27.962 422 232 6 1 352 84 503 4.81e-48 172
Msa0107500 MtrunA17_Chr4g0046351 29.587 436 226 13 2 359 84 516 6.55e-48 172
Msa0107500 MtrunA17_Chr6g0484811 27.294 425 236 11 1 355 84 505 9.52e-48 171
Msa0107500 MtrunA17_Chr8g0344191 29.858 422 220 10 2 351 117 534 1.30e-47 172
Msa0107500 MtrunA17_Chr4g0047631 29.147 422 225 11 1 354 96 511 1.33e-47 171
Msa0107500 MtrunA17_Chr3g0101631 28.814 413 232 9 1 353 84 494 1.36e-47 171
Msa0107500 MtrunA17_Chr1g0207841 27.294 436 235 8 1 355 85 519 2.01e-47 171
Msa0107500 MtrunA17_Chr5g0423621 44.199 181 73 1 202 354 1 181 2.22e-47 161
Msa0107500 MtrunA17_Chr4g0058191 28.000 425 220 13 1 351 72 484 2.31e-47 170
Msa0107500 MtrunA17_Chr5g0445441 27.316 421 233 12 1 355 128 541 3.57e-47 171
Msa0107500 MtrunA17_Chr5g0430071 36.607 224 109 3 163 355 136 357 3.95e-47 166
Msa0107500 MtrunA17_Chr4g0047661 28.904 429 231 11 1 358 95 520 3.96e-47 170
Msa0107500 MtrunA17_Chr7g0235551 28.140 430 225 11 2 353 82 505 7.11e-47 169
Msa0107500 MtrunA17_Chr4g0047641 28.341 434 224 11 1 358 97 519 7.86e-47 169
Msa0107500 MtrunA17_Chr5g0430101 27.660 423 234 12 1 355 83 501 8.21e-47 169
Msa0107500 MtrunA17_Chr3g0101601 29.227 414 228 9 1 352 84 494 9.16e-47 168
Msa0107500 MtrunA17_Chr5g0401681 31.477 413 216 13 1 351 79 486 1.03e-46 168
Msa0107500 MtrunA17_Chr3g0101661 27.512 418 235 7 1 352 86 501 1.34e-46 168
Msa0107500 MtrunA17_Chr4g0053621 30.508 413 209 10 14 356 91 495 1.55e-46 168
Msa0107500 MtrunA17_Chr4g0030711 26.484 438 238 9 1 355 84 520 1.57e-46 168
Msa0107500 MtrunA17_Chr8g0390881 26.588 425 239 11 1 355 83 504 1.98e-46 168
Msa0107500 MtrunA17_Chr8g0361471 30.072 419 226 11 1 353 82 499 2.26e-46 167
Msa0107500 MtrunA17_Chr5g0431641 27.896 423 228 10 1 355 87 500 2.47e-46 167
Msa0107500 MtrunA17_Chr3g0101581 27.751 418 234 8 1 352 84 499 2.51e-46 167
Msa0107500 MtrunA17_Chr4g0011961 26.988 415 239 4 1 351 77 491 2.65e-46 167
Msa0107500 MtrunA17_Chr4g0046321 28.506 435 232 13 2 359 84 516 4.26e-46 167
Msa0107500 MtrunA17_Chr3g0101731 29.762 420 222 13 1 352 84 498 5.10e-46 167
Msa0107500 MtrunA17_Chr5g0431671 26.555 418 240 8 1 355 88 501 6.28e-46 166
Msa0107500 MtrunA17_Chr5g0445531 27.251 422 231 12 1 355 87 499 6.59e-46 166
Msa0107500 MtrunA17_Chr4g0039391 28.537 417 229 11 1 351 82 495 7.46e-46 166
Msa0107500 MtrunA17_Chr8g0382901 28.148 405 231 7 1 352 75 472 8.58e-46 170
Msa0107500 MtrunA17_Chr8g0382901 27.098 417 241 8 1 355 539 954 7.23e-43 162
Msa0107500 MtrunA17_Chr5g0403331 29.594 419 226 10 1 352 85 501 1.01e-45 166
Msa0107500 MtrunA17_Chr3g0101611 28.095 420 232 10 1 353 85 501 1.02e-45 166
Msa0107500 MtrunA17_Chr4g0024771 27.014 422 233 11 1 355 87 500 2.42e-45 165
Msa0107500 MtrunA17_Chr7g0255531 26.995 426 236 7 1 355 75 496 2.45e-45 165
Msa0107500 MtrunA17_Chr6g0466331 29.551 423 233 10 1 358 82 504 2.73e-45 164
Msa0107500 MtrunA17_Chr5g0445381 26.905 420 236 10 1 355 118 531 2.90e-45 165
Msa0107500 MtrunA17_Chr5g0431511 25.118 422 249 4 1 355 81 502 3.07e-45 164
Msa0107500 MtrunA17_Chr3g0101691 28.369 423 228 10 1 353 86 503 3.76e-45 164
Msa0107500 MtrunA17_Chr1g0174431 38.647 207 88 3 186 355 1 205 4.99e-45 156
Msa0107500 MtrunA17_Chr6g0465511 29.551 423 233 10 1 358 82 504 5.62e-45 164
Msa0107500 MtrunA17_Chr4g0058211 35.714 210 100 4 175 351 5 212 5.82e-45 156
Msa0107500 MtrunA17_Chr5g0403351 29.078 423 223 12 1 352 84 500 6.73e-45 164
Msa0107500 MtrunA17_Chr3g0101701 26.969 419 237 9 1 352 86 502 7.80e-45 163
Msa0107500 MtrunA17_Chr4g0011901 27.338 417 236 6 1 351 77 492 8.08e-45 163
Msa0107500 MtrunA17_Chr2g0310391 26.429 420 243 9 1 355 75 493 8.34e-45 163
Msa0107500 MtrunA17_Chr5g0430091 28.066 424 233 12 1 355 84 504 8.82e-45 163
Msa0107500 MtrunA17_Chr7g0258211 27.842 431 224 11 1 353 86 507 9.49e-45 163
Msa0107500 MtrunA17_Chr3g0101741 26.699 412 240 9 1 353 13 421 9.76e-45 161
Msa0107500 MtrunA17_Chr3g0101651 28.266 421 229 10 1 352 86 502 1.45e-44 162
Msa0107500 MtrunA17_Chr7g0254641 27.561 410 210 10 29 355 109 514 2.42e-44 162
Msa0107500 MtrunA17_Chr2g0310381 26.905 420 241 8 1 355 75 493 3.12e-44 161
Msa0107500 MtrunA17_Chr5g0431591 32.677 254 134 4 137 355 67 318 3.58e-44 157
Msa0107500 MtrunA17_Chr5g0430031 27.972 429 227 14 1 355 84 504 9.02e-44 160
Msa0107500 MtrunA17_Chr3g0101571 27.512 418 233 10 1 352 83 496 1.02e-43 160
Msa0107500 MtrunA17_Chr4g0011981 28.058 417 233 7 1 351 77 492 1.61e-43 159
Msa0107500 MtrunA17_Chr4g0017411 32.598 408 208 17 1 351 78 475 3.13e-43 159
Msa0107500 MtrunA17_Chr5g0401691 29.854 412 220 8 1 350 98 502 3.51e-43 159
Msa0107500 MtrunA17_Chr1g0156101 26.667 435 237 9 1 355 80 512 4.88e-43 159
Msa0107500 MtrunA17_Chr8g0390871 35.071 211 105 3 176 355 17 226 1.27e-42 150
Msa0107500 MtrunA17_Chr2g0310351 34.500 200 101 1 186 355 1 200 1.42e-42 149
Msa0107500 MtrunA17_Chr6g0463801 26.329 414 241 8 1 353 85 495 1.59e-42 157
Msa0107500 MtrunA17_Chr4g0052851 32.353 408 209 16 1 351 81 478 2.11e-42 156
Msa0107500 MtrunA17_Chr5g0431501 24.882 422 250 4 1 355 81 502 1.01e-41 155
Msa0107500 MtrunA17_Chr5g0431461 24.882 422 250 4 1 355 81 502 1.01e-41 155
Msa0107500 MtrunA17_Chr4g0058201 27.660 423 226 9 1 351 75 489 1.90e-41 154
Msa0107500 MtrunA17_Chr4g0076161 26.923 416 238 7 1 352 87 500 2.67e-41 154
Msa0107500 MtrunA17_Chr5g0446161 27.007 411 241 9 1 353 89 498 2.72e-41 154
Msa0107500 MtrunA17_Chr4g0011921 29.017 417 229 9 1 351 77 492 4.04e-41 153
Msa0107500 MtrunA17_Chr3g0101811 27.378 431 232 11 1 352 85 513 1.09e-40 152
Msa0107500 MtrunA17_Chr8g0351801 26.977 430 224 11 10 353 91 516 1.27e-40 152
Msa0107500 MtrunA17_Chr3g0101821 30.861 418 221 12 1 352 83 498 5.10e-40 150
Msa0107500 MtrunA17_Chr5g0446151 26.265 415 240 9 1 353 89 499 1.51e-39 149
Msa0107500 MtrunA17_Chr1g0162811 26.824 425 226 10 1 352 85 497 2.74e-39 148
Msa0107500 MtrunA17_Chr6g0472311 36.087 230 113 5 156 351 284 513 2.76e-39 148
Msa0107500 MtrunA17_Chr6g0451681 32.154 311 173 7 5 305 114 396 3.30e-39 147
Msa0107500 MtrunA17_Chr3g0101751 30.361 415 221 10 1 349 90 502 4.22e-39 148
Msa0107500 MtrunA17_Chr1g0167321 29.594 419 225 10 1 352 82 497 7.94e-39 147
Msa0107500 MtrunA17_Chr8g0357421 29.227 414 231 9 1 352 85 498 1.43e-38 146
Msa0107500 MtrunA17_Chr6g0458561 29.673 428 223 14 1 355 104 526 1.59e-38 146
Msa0107500 MtrunA17_Chr4g0052861 28.706 425 212 15 1 351 79 486 4.40e-38 144
Msa0107500 MtrunA17_Chr5g0430111 28.736 348 198 12 1 305 84 424 5.20e-38 143
Msa0107500 MtrunA17_Chr5g0446101 34.008 247 128 5 141 353 66 311 6.03e-38 140
Msa0107500 MtrunA17_Chr4g0052881 28.288 403 217 12 14 351 92 487 9.59e-38 144
Msa0107500 MtrunA17_Chr7g0218611 24.940 417 246 6 1 351 81 496 2.46e-37 142
Msa0107500 MtrunA17_Chr6g0451691 27.945 433 224 10 1 348 90 519 2.64e-37 143
Msa0107500 MtrunA17_Chr3g0101831 28.947 418 228 10 1 352 85 499 2.91e-37 142
Msa0107500 MtrunA17_Chr4g0011941 36.548 197 95 1 186 352 1 197 3.14e-37 135
Msa0107500 MtrunA17_Chr3g0101761 29.880 415 223 11 1 349 83 495 3.84e-37 142
Msa0107500 MtrunA17_Chr1g0156061 28.389 391 219 7 1 355 103 468 8.69e-37 140
Msa0107500 MtrunA17_Chr3g0101801 28.095 420 232 9 1 353 90 506 9.84e-37 141
Msa0107500 MtrunA17_Chr8g0357431 28.297 417 232 8 1 352 85 499 1.35e-36 140
Msa0107500 MtrunA17_Chr5g0419691 27.446 419 227 8 1 348 77 489 1.63e-36 140
Msa0107500 MtrunA17_Chr6g0477081 39.130 161 87 2 136 296 92 241 2.52e-36 134
Msa0107500 MtrunA17_Chr3g0101591 35.354 198 98 2 185 352 38 235 3.76e-36 133
Msa0107500 MtrunA17_Chr4g0011881 27.685 419 231 8 1 351 78 492 3.78e-36 139
Msa0107500 MtrunA17_Chr4g0011871 27.857 420 225 9 1 348 77 490 5.30e-36 139
Msa0107500 MtrunA17_Chr1g0162801 28.878 419 228 10 1 352 85 500 5.61e-36 139
Msa0107500 MtrunA17_Chr6g0463791 26.316 418 240 8 1 354 85 498 8.90e-36 138
Msa0107500 MtrunA17_Chr6g0451751 46.259 147 79 0 159 305 297 443 1.11e-35 138
Msa0107500 MtrunA17_Chr5g0406651 26.777 422 226 6 1 348 78 490 3.07e-35 137
Msa0107500 MtrunA17_Chr2g0296651 33.028 218 117 3 160 351 272 486 3.14e-35 137
Msa0107500 MtrunA17_Chr7g0218601 25.899 417 240 10 1 351 82 495 4.27e-35 136
Msa0107500 MtrunA17_Chr5g0432751 28.205 351 198 11 1 305 81 423 6.28e-35 136
Msa0107500 MtrunA17_Chr4g0008101 26.914 431 229 9 1 348 88 515 1.30e-34 135
Msa0107500 MtrunA17_Chr8g0339331 27.610 431 231 13 1 355 88 513 3.73e-34 134
Msa0107500 MtrunA17_Chr8g0339311 29.060 351 205 7 1 307 93 443 5.22e-34 134
Msa0107500 MtrunA17_Chr4g0011851 34.184 196 99 1 179 344 9 204 9.91e-34 126
Msa0107500 MtrunA17_Chr6g0451641 36.323 223 105 6 159 348 290 508 1.28e-33 132
Msa0107500 MtrunA17_Chr5g0430151 35.429 175 82 2 212 355 1 175 1.61e-33 124
Msa0107500 MtrunA17_Chr6g0451811 38.579 197 86 4 184 348 3 196 2.36e-33 125
Msa0107500 MtrunA17_Chr6g0451771 36.410 195 89 2 186 348 22 213 4.56e-33 125
Msa0107500 MtrunA17_Chr2g0296661 30.788 419 216 14 1 351 79 491 9.43e-33 130
Msa0107500 MtrunA17_Chr2g0280261 26.555 418 233 9 1 352 82 491 1.03e-32 129
Msa0107500 MtrunA17_Chr1g0156081 26.484 438 234 9 1 355 104 536 1.83e-32 129
Msa0107500 MtrunA17_Chr4g0046681 43.704 135 75 1 172 305 16 150 6.10e-32 122
Msa0107500 MtrunA17_Chr5g0444981 43.678 174 67 2 192 335 17 189 8.05e-32 121
Msa0107500 MtrunA17_Chr6g0451741 27.083 432 228 10 1 348 109 537 1.39e-31 127
Msa0107500 MtrunA17_Chr6g0463621 31.841 201 102 3 186 352 1 200 2.45e-31 119
Msa0107500 MtrunA17_Chr6g0466941 30.312 353 192 10 5 305 87 437 4.78e-31 125
Msa0107500 MtrunA17_Chr5g0419451 26.549 339 208 8 2 305 108 440 5.88e-31 125
Msa0107500 MtrunA17_Chr2g0314771 50.877 114 56 0 1 114 13 126 1.41e-30 115
Msa0107500 MtrunA17_Chr6g0451781 25.682 440 221 9 1 348 123 548 1.88e-30 124
Msa0107500 MtrunA17_Chr6g0466901 30.682 352 191 12 5 305 87 436 2.95e-30 123
Msa0107500 MtrunA17_Chr8g0377341 29.326 341 196 12 2 305 117 449 4.30e-30 122
Msa0107500 MtrunA17_Chr3g0086681 38.095 168 70 1 222 355 1 168 5.94e-30 114
Msa0107500 MtrunA17_Chr3g0082701 34.685 222 110 3 159 348 298 516 5.20e-29 119
Msa0107500 MtrunA17_Chr1g0210091 33.939 165 108 1 141 305 289 452 1.05e-28 118
Msa0107500 MtrunA17_Chr1g0200951 40.000 150 87 3 158 305 299 447 3.57e-28 117
Msa0107500 MtrunA17_Chr8g0346261 27.619 315 190 12 34 313 164 475 4.00e-28 117
Msa0107500 MtrunA17_Chr2g0304871 26.136 352 208 8 1 305 88 434 5.99e-28 116
Msa0107500 MtrunA17_Chr5g0445351 34.337 166 79 2 213 348 51 216 7.02e-28 110
Msa0107500 MtrunA17_Chr5g0430041 32.911 158 75 2 212 338 1 158 9.24e-28 108
Msa0107500 MtrunA17_Chr5g0445761 36.869 198 95 2 186 353 1 198 8.99e-27 107
Msa0107500 MtrunA17_Chr1g0198191 36.735 147 92 1 159 305 289 434 6.09e-26 110
Msa0107500 MtrunA17_Chr8g0370641 34.706 170 107 2 141 307 272 440 6.35e-26 110
Msa0107500 MtrunA17_Chr3g0107551 39.516 124 75 0 182 305 1 124 7.59e-26 104
Msa0107500 MtrunA17_Chr8g0370651 31.746 252 130 7 141 355 276 522 1.46e-25 109
Msa0107500 MtrunA17_Chr3g0107611 35.570 149 94 1 159 305 302 450 2.11e-25 108
Msa0107500 MtrunA17_Chr3g0107541 33.918 171 103 2 141 305 279 445 9.06e-25 107
Msa0107500 MtrunA17_Chr5g0402981 42.727 110 62 1 197 305 3 112 1.98e-24 100
Msa0107500 MtrunA17_Chr2g0334021 32.227 211 109 5 169 350 288 493 3.68e-24 105
Msa0107500 MtrunA17_Chr5g0445371 27.668 253 116 7 137 355 11 230 9.07e-24 99.8
Msa0107500 MtrunA17_Chr5g0409051 33.333 156 101 2 152 306 275 428 1.10e-23 103
Msa0107500 MtrunA17_Chr3g0101541 38.060 134 53 2 236 339 3 136 1.59e-23 95.9
Msa0107500 MtrunA17_Chr4g0046661 44.444 126 70 0 179 304 18 143 2.30e-23 98.2
Msa0107500 MtrunA17_Chr4g0074581 29.412 221 124 4 117 305 241 461 9.89e-23 100
Msa0107500 MtrunA17_Chr8g0372591 35.246 122 79 0 184 305 1 122 9.90e-23 94.0
Msa0107500 MtrunA17_Chr4g0046631 27.066 351 203 9 1 305 95 438 2.37e-22 99.8
Msa0107500 MtrunA17_Chr3g0105761 38.793 116 69 1 188 303 2 115 4.54e-22 94.0
Msa0107500 MtrunA17_Chr8g0364651 36.923 130 80 1 177 304 287 416 3.35e-21 96.3
Msa0107500 MtrunA17_Chr2g0280081 34.783 138 85 1 173 305 788 925 4.26e-21 96.7
Msa0107500 MtrunA17_Chr2g0280081 34.058 138 86 1 173 305 287 424 1.60e-18 89.0
Msa0107500 MtrunA17_Chr5g0413911 35.714 140 87 1 169 305 310 449 4.75e-21 95.9
Msa0107500 MtrunA17_Chr4g0028321 38.060 134 51 4 253 355 25 157 6.73e-21 89.4
Msa0107500 MtrunA17_Chr8g0387101 35.971 139 83 2 173 305 288 426 2.19e-20 93.6
Msa0107500 MtrunA17_Chr4g0056981 54.167 72 33 0 212 283 1 72 3.06e-20 84.7
Msa0107500 MtrunA17_Chr2g0280121 34.437 151 92 3 160 305 282 430 9.08e-20 92.0
Msa0107500 MtrunA17_Chr8g0381571 31.461 178 115 4 133 304 242 418 1.54e-18 87.8
Msa0107500 MtrunA17_Chr8g0381541 31.461 178 115 4 133 304 242 418 1.63e-18 87.8
Msa0107500 MtrunA17_Chr5g0396521 33.071 127 77 2 186 305 348 473 1.68e-18 88.2
Msa0107500 MtrunA17_Chr2g0280061 32.558 129 82 1 182 305 4 132 1.97e-18 84.0
Msa0107500 MtrunA17_Chr4g0046701 50.000 78 39 0 228 305 1 78 2.63e-18 82.0
Msa0107500 MtrunA17_Chr2g0280011 31.783 129 83 1 182 305 4 132 3.23e-18 83.2
Msa0107500 MtrunA17_Chr3g0117301 44.118 68 38 0 237 304 1 68 7.72e-18 79.3
Msa0107500 MtrunA17_Chr6g0449341 32.692 156 97 4 159 306 333 488 1.30e-17 85.5
Msa0107500 MtrunA17_Chr3g0116731 42.424 66 38 0 239 304 3 68 2.05e-17 79.0
Msa0107500 MtrunA17_Chr2g0280041 32.117 137 88 1 173 304 319 455 4.50e-17 83.6
Msa0107500 MtrunA17_Chr6g0449331 31.613 155 98 4 159 305 285 439 7.95e-17 82.8
Msa0107500 MtrunA17_Chr4g0076171 28.342 187 77 4 202 352 1 166 1.06e-16 77.8
Msa0107500 MtrunA17_Chr2g0293421 30.682 176 116 3 134 304 244 418 1.38e-16 82.0
Msa0107500 MtrunA17_Chr2g0280071 29.710 138 92 1 173 305 320 457 2.08e-16 82.0
Msa0107500 MtrunA17_Chr7g0248991 31.092 119 80 2 186 304 235 351 2.27e-15 77.4
Msa0107500 MtrunA17_Chr2g0293411 30.726 179 114 5 134 304 240 416 3.92e-15 77.4
Msa0107500 MtrunA17_Chr0c19g0493771 28.758 153 89 4 186 338 453 585 5.35e-15 77.4
Msa0107500 MtrunA17_Chr8g0351441 30.864 162 99 3 157 305 272 433 1.56e-14 75.9
Msa0107500 MtrunA17_Chr4g0038271 28.395 162 103 3 157 305 324 485 1.95e-14 75.5
Msa0107500 MtrunA17_Chr8g0351401 27.624 181 117 5 139 305 254 434 3.21e-14 74.7
Msa0107500 MtrunA17_Chr8g0364631 39.091 110 65 1 198 305 310 419 4.08e-14 74.3
Msa0107500 MtrunA17_Chr6g0449381 26.404 178 123 5 137 306 253 430 5.02e-14 73.9
Msa0107500 MtrunA17_Chr4g0004481 26.012 173 121 4 139 305 245 416 5.07e-14 73.9
Msa0107500 MtrunA17_Chr5g0445361 28.906 128 61 2 256 353 8 135 5.76e-14 68.9
Msa0107500 MtrunA17_Chr8g0371761 32.727 110 63 2 205 303 1 110 7.41e-14 68.9
Msa0107500 MtrunA17_Chr8g0339861 29.379 177 118 3 133 304 241 415 9.67e-14 73.2
Msa0107500 MtrunA17_Chr1g0204271 21.471 340 207 8 25 305 91 429 1.32e-13 72.8
Msa0107500 MtrunA17_Chr4g0063221 31.405 121 81 2 185 304 324 443 1.62e-13 72.4
Msa0107500 MtrunA17_Chr1g0164321 28.659 164 102 4 157 305 308 471 1.73e-13 72.4
Msa0107500 MtrunA17_Chr6g0449361 27.778 162 107 4 155 306 267 428 2.03e-13 72.4
Msa0107500 MtrunA17_Chr8g0351461 28.342 187 104 4 157 330 272 441 2.77e-13 71.6
Msa0107500 MtrunA17_Chr6g0449351 25.568 176 125 4 137 306 213 388 3.16e-13 71.6
Msa0107500 MtrunA17_Chr8g0348751 28.780 205 122 8 131 311 238 442 3.82e-13 71.6
Msa0107500 MtrunA17_Chr8g0387001 27.907 172 112 4 146 305 259 430 4.86e-13 71.2
Msa0107500 MtrunA17_Chr1g0163431 28.571 161 106 4 155 306 229 389 7.36e-13 70.1
Msa0107500 MtrunA17_Chr7g0260831 28.472 144 99 2 163 305 280 420 9.45e-13 70.1
Msa0107500 MtrunA17_Chr7g0260821 26.708 161 114 2 146 305 264 421 1.26e-12 69.7
Msa0107500 MtrunA17_Chr6g0457421 31.447 159 105 4 159 316 291 446 1.27e-12 69.7
Msa0107500 MtrunA17_Chr3g0104351 26.087 161 107 3 159 307 278 438 1.63e-12 69.3
Msa0107500 MtrunA17_Chr1g0179811 28.105 153 91 3 186 338 344 477 1.83e-12 69.3
Msa0107500 MtrunA17_Chr1g0163451 26.490 151 106 3 160 305 298 448 2.07e-12 68.9
Msa0107500 MtrunA17_Chr5g0444971 39.506 81 49 0 1 81 2 82 3.08e-12 62.4
Msa0107500 MtrunA17_Chr4g0030741 24.291 247 151 6 2 215 112 355 7.04e-12 66.6
Msa0107500 MtrunA17_Chr7g0227281 28.125 160 99 5 157 305 264 418 7.37e-12 67.4
Msa0107500 MtrunA17_Chr1g0163511 29.032 155 101 4 157 305 292 443 1.05e-11 67.0
Msa0107500 MtrunA17_Chr6g0472221 29.114 158 98 6 157 305 299 451 1.77e-11 66.2
Msa0107500 MtrunA17_Chr1g0171041 25.134 187 126 6 129 305 249 431 2.24e-11 65.9
Msa0107500 MtrunA17_Chr1g0163391 29.221 154 99 4 160 305 275 426 2.45e-11 65.9
Msa0107500 MtrunA17_Chr7g0235261 28.090 178 113 8 142 308 266 439 2.65e-11 65.5
Msa0107500 MtrunA17_Chr8g0380501 24.713 174 123 4 139 305 243 415 2.81e-11 65.5
Msa0107500 MtrunA17_Chr1g0163371 31.250 128 83 3 183 305 19 146 3.74e-11 62.8
Msa0107500 MtrunA17_Chr5g0400421 27.528 178 120 5 133 304 245 419 9.71e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0107500 AT2G45560.1 39.243 423 189 6 1 355 85 507 3.08e-98 304
Msa0107500 AT1G33720.1 39.858 424 185 7 1 355 85 507 1.53e-96 300
Msa0107500 AT2G45550.1 37.825 423 195 7 1 355 85 507 5.05e-95 296
Msa0107500 AT2G45570.1 39.623 424 187 7 1 355 85 508 5.72e-95 296
Msa0107500 AT3G61040.1 37.767 421 192 6 1 355 80 496 2.37e-91 286
Msa0107500 AT2G45580.1 36.891 431 201 7 1 361 85 514 2.86e-91 286
Msa0107500 AT1G33720.4 40.267 375 155 6 49 355 2 375 1.48e-84 265
Msa0107500 AT1G33720.3 40.267 375 155 6 49 355 2 375 1.48e-84 265
Msa0107500 AT1G33720.5 40.267 375 155 6 49 355 2 375 1.48e-84 265
Msa0107500 AT1G33730.1 40.443 361 148 5 57 350 6 366 4.87e-82 258
Msa0107500 AT1G33730.2 40.443 361 148 5 57 350 6 366 4.87e-82 258
Msa0107500 AT1G33720.2 37.750 400 155 7 49 355 2 400 2.83e-79 252
Msa0107500 AT2G45580.2 37.500 360 154 6 72 361 2 360 1.20e-73 236
Msa0107500 AT5G07990.1 33.958 427 204 12 2 355 81 502 7.84e-64 215
Msa0107500 AT2G45580.3 37.931 319 157 6 1 279 85 402 4.75e-63 210
Msa0107500 AT3G61040.2 36.792 318 161 5 1 282 80 393 1.66e-60 203
Msa0107500 AT4G12300.1 31.206 423 220 10 1 355 89 508 7.52e-60 204
Msa0107500 AT5G44620.1 29.384 422 228 6 1 355 93 511 2.65e-59 203
Msa0107500 AT4G12330.1 30.806 422 221 7 1 355 93 510 4.59e-57 197
Msa0107500 AT4G12320.1 29.412 425 227 9 1 355 89 510 8.21e-57 196
Msa0107500 AT4G12310.1 29.176 425 228 8 1 355 91 512 8.29e-56 194
Msa0107500 AT3G26300.1 30.095 422 224 10 1 354 78 496 1.01e-55 193
Msa0107500 AT4G22710.1 29.673 428 217 10 1 355 101 517 3.24e-54 189
Msa0107500 AT4G36220.1 29.797 443 209 11 1 355 87 515 3.86e-54 189
Msa0107500 AT4G22690.1 29.673 428 217 10 1 355 132 548 7.32e-54 189
Msa0107500 AT5G57260.1 28.842 423 232 9 1 354 77 499 5.25e-53 186
Msa0107500 AT3G26310.1 28.199 422 237 9 1 356 77 498 1.32e-52 184
Msa0107500 AT3G26210.1 28.842 423 233 7 1 355 78 500 1.48e-52 184
Msa0107500 AT5G06900.1 30.000 430 220 14 1 362 81 497 2.43e-52 184
Msa0107500 AT4G37410.1 30.075 399 213 9 14 351 92 485 2.01e-51 181
Msa0107500 AT4G37430.1 29.829 409 207 12 14 351 89 488 3.27e-51 181
Msa0107500 AT4G37360.1 30.825 412 217 10 1 351 80 484 6.08e-51 180
Msa0107500 AT3G26330.1 27.896 423 232 8 1 354 78 496 1.15e-50 179
Msa0107500 AT3G52970.1 30.930 430 218 11 1 353 84 511 1.17e-50 180
Msa0107500 AT3G26320.1 28.333 420 234 10 1 354 78 496 2.05e-50 179
Msa0107500 AT4G31500.1 29.647 425 226 13 1 355 77 498 6.98e-50 177
Msa0107500 AT4G37400.1 30.193 414 219 13 14 365 92 497 1.31e-49 176
Msa0107500 AT3G52970.2 30.405 444 216 11 1 353 84 525 7.51e-49 175
Msa0107500 AT5G57220.1 31.830 399 211 12 14 356 91 484 8.62e-49 174
Msa0107500 AT1G66540.1 31.759 381 182 10 43 356 7 376 1.32e-48 171
Msa0107500 AT3G20960.2 30.045 446 221 13 1 368 89 521 6.68e-48 172
Msa0107500 AT2G40890.1 28.369 423 234 8 1 355 74 495 1.66e-47 171
Msa0107500 AT3G26280.2 27.465 426 235 8 1 355 96 518 3.67e-47 170
Msa0107500 AT3G26280.1 27.465 426 235 8 1 355 79 501 3.85e-47 170
Msa0107500 AT4G37340.1 30.024 413 220 11 1 351 80 485 7.80e-47 169
Msa0107500 AT5G67310.1 30.120 415 215 11 1 350 90 494 1.39e-46 169
Msa0107500 AT3G26270.1 26.744 430 228 9 1 353 79 498 1.44e-46 168
Msa0107500 AT4G37370.1 29.952 414 214 12 2 351 81 482 1.80e-46 168
Msa0107500 AT3G20960.1 31.250 400 184 13 47 368 32 418 5.23e-46 165
Msa0107500 AT3G20090.1 34.749 259 124 7 150 368 133 386 7.62e-46 164
Msa0107500 AT3G20950.1 29.032 434 228 10 2 363 95 520 8.76e-46 167
Msa0107500 AT1G13080.1 27.529 425 229 10 5 355 82 501 1.17e-45 166
Msa0107500 AT3G20090.2 28.251 446 230 13 1 368 91 524 1.33e-45 166
Msa0107500 AT5G42580.1 28.193 415 230 11 1 355 87 493 1.64e-45 166
Msa0107500 AT3G28740.1 30.843 415 213 14 1 351 89 493 1.71e-45 166
Msa0107500 AT5G25120.1 27.404 416 237 9 2 353 77 491 1.98e-45 165
Msa0107500 AT5G25180.1 27.404 416 237 11 2 353 77 491 2.69e-45 165
Msa0107500 AT4G15350.1 35.714 238 109 6 158 356 271 503 4.23e-45 164
Msa0107500 AT3G20130.1 27.752 436 227 11 1 360 90 513 5.43e-45 164
Msa0107500 AT4G37320.1 30.383 418 210 13 1 351 81 484 5.86e-45 164
Msa0107500 AT1G66540.2 38.095 252 121 6 132 356 74 317 6.27e-45 160
Msa0107500 AT5G25140.1 27.338 417 236 9 2 353 77 491 6.60e-45 164
Msa0107500 AT4G13770.1 28.266 421 235 10 1 354 78 498 1.04e-44 163
Msa0107500 AT2G24180.1 28.504 421 226 11 1 353 83 496 1.28e-44 163
Msa0107500 AT5G35715.1 27.465 426 230 11 1 352 13 433 2.00e-44 161
Msa0107500 AT5G47990.1 35.510 245 114 4 150 356 270 508 2.35e-44 162
Msa0107500 AT1G13110.1 27.187 423 238 9 1 353 79 501 3.42e-44 162
Msa0107500 AT3G26200.1 28.810 420 230 8 2 352 76 495 3.44e-44 162
Msa0107500 AT5G36220.1 28.070 399 218 8 14 351 100 490 3.59e-44 162
Msa0107500 AT3G20120.2 34.177 237 113 5 159 357 141 372 3.64e-44 159
Msa0107500 AT3G20120.3 34.177 237 113 5 159 357 141 372 3.64e-44 159
Msa0107500 AT3G20120.1 34.177 237 113 5 159 357 141 372 3.64e-44 159
Msa0107500 AT3G26180.2 34.615 260 131 5 131 354 110 366 3.69e-44 159
Msa0107500 AT5G04330.1 28.506 435 222 12 1 355 79 504 4.71e-44 162
Msa0107500 AT3G26180.1 27.869 427 232 7 1 354 77 500 7.30e-44 161
Msa0107500 AT3G32047.1 28.993 407 205 10 2 336 91 485 7.53e-44 161
Msa0107500 AT3G26170.1 27.400 427 234 7 1 354 77 500 9.22e-44 160
Msa0107500 AT2G14100.1 28.438 429 221 11 1 355 91 507 9.50e-44 161
Msa0107500 AT5G36220.2 35.417 240 121 5 138 351 113 344 1.00e-43 157
Msa0107500 AT4G15360.1 29.600 375 191 12 46 352 133 502 1.29e-43 160
Msa0107500 AT3G20130.2 28.645 391 191 11 46 360 107 485 1.66e-43 160
Msa0107500 AT3G20120.4 34.177 237 113 5 159 357 277 508 2.80e-43 159
Msa0107500 AT3G20100.1 26.118 425 239 9 1 355 89 508 4.52e-43 159
Msa0107500 AT4G15380.1 25.935 428 247 8 1 363 90 512 6.37e-43 159
Msa0107500 AT4G37330.1 30.144 418 218 14 1 356 81 486 6.58e-43 158
Msa0107500 AT1G13080.2 32.692 260 137 5 131 355 127 383 7.20e-43 155
Msa0107500 AT1G50560.1 26.484 438 232 10 1 360 91 516 7.33e-43 159
Msa0107500 AT3G20110.1 25.342 438 241 9 1 367 87 509 8.23e-43 158
Msa0107500 AT2G02580.1 29.904 418 222 9 5 354 82 496 1.17e-42 157
Msa0107500 AT1G13090.2 29.830 352 191 11 1 305 75 417 2.28e-42 157
Msa0107500 AT3G20940.1 26.620 432 242 9 2 363 91 517 2.38e-42 157
Msa0107500 AT2G27000.1 27.083 432 240 9 1 362 87 513 5.42e-42 156
Msa0107500 AT5G25130.1 27.229 415 239 9 2 353 77 491 2.83e-41 154
Msa0107500 AT4G15330.2 28.080 349 185 11 49 361 162 480 3.09e-41 154
Msa0107500 AT1G13100.1 29.480 346 203 8 1 305 72 417 3.35e-41 154
Msa0107500 AT4G15330.1 28.080 349 185 11 49 361 190 508 5.44e-41 153
Msa0107500 AT3G26190.1 27.725 422 236 8 1 353 75 496 6.36e-41 153
Msa0107500 AT3G26290.1 27.857 420 236 6 1 354 78 496 6.85e-41 153
Msa0107500 AT3G26290.2 27.857 420 236 6 1 354 91 509 8.63e-41 153
Msa0107500 AT2G27010.1 34.363 259 125 7 150 368 245 498 1.06e-40 152
Msa0107500 AT1G74540.1 28.230 418 218 12 1 348 74 479 1.20e-40 152
Msa0107500 AT3G26830.1 29.915 351 192 9 1 305 75 417 1.23e-40 152
Msa0107500 AT1G50520.1 27.083 432 238 11 1 361 91 516 1.51e-40 152
Msa0107500 AT1G28430.1 34.188 234 112 5 159 355 279 507 2.43e-40 152
Msa0107500 AT1G74550.1 36.150 213 104 2 173 355 270 480 4.04e-40 150
Msa0107500 AT3G26230.1 33.840 263 129 7 131 353 238 495 5.82e-40 150
Msa0107500 AT3G20140.1 33.333 234 116 5 159 357 278 506 6.91e-40 150
Msa0107500 AT2G30770.1 25.721 416 243 11 1 352 80 493 1.15e-39 149
Msa0107500 AT3G20080.4 32.114 246 123 6 150 356 133 373 2.92e-39 146
Msa0107500 AT3G20080.5 32.114 246 123 6 150 356 133 373 2.92e-39 146
Msa0107500 AT3G20080.6 32.114 246 123 6 150 356 133 373 2.92e-39 146
Msa0107500 AT3G20080.3 32.114 246 123 6 150 356 133 373 2.92e-39 146
Msa0107500 AT3G20080.2 26.526 426 238 10 1 356 90 510 3.44e-39 149
Msa0107500 AT3G20080.1 26.526 426 238 10 1 356 90 510 3.44e-39 149
Msa0107500 AT3G26150.1 33.840 263 129 6 131 354 244 500 3.81e-39 148
Msa0107500 AT4G31940.1 28.935 432 220 10 1 348 82 510 4.83e-39 148
Msa0107500 AT1G01280.1 26.328 433 225 12 5 355 83 503 1.02e-38 147
Msa0107500 AT3G53300.1 29.314 423 224 9 2 352 76 495 2.05e-38 146
Msa0107500 AT5G10600.1 23.832 428 230 12 1 351 94 502 3.55e-38 145
Msa0107500 AT2G23220.1 26.024 415 233 12 1 351 96 500 4.77e-38 145
Msa0107500 AT5G10610.1 25.060 419 236 10 1 352 80 487 5.93e-38 145
Msa0107500 AT5G06905.1 29.513 349 197 11 1 307 78 419 5.97e-38 145
Msa0107500 AT4G31970.1 28.074 431 224 9 1 348 82 509 1.41e-37 144
Msa0107500 AT2G05180.1 27.746 346 201 8 1 305 89 426 3.73e-37 141
Msa0107500 AT2G23190.1 27.273 418 223 14 1 351 125 528 4.54e-37 143
Msa0107500 AT3G26160.1 26.887 424 240 9 1 354 77 500 1.25e-36 141
Msa0107500 AT3G20935.1 32.093 215 105 4 185 363 133 342 2.10e-36 137
Msa0107500 AT4G13290.1 26.988 415 233 11 1 352 80 487 8.54e-36 139
Msa0107500 AT2G42250.1 30.962 239 118 5 157 353 275 508 9.16e-36 139
Msa0107500 AT4G37310.1 26.456 412 225 11 11 350 90 495 1.04e-35 139
Msa0107500 AT4G13310.1 26.555 418 239 13 1 352 79 494 1.23e-35 138
Msa0107500 AT1G11610.1 25.000 416 246 9 1 352 80 493 3.02e-34 134
Msa0107500 AT3G48310.1 26.098 410 241 12 1 351 79 485 6.60e-34 133
Msa0107500 AT3G48270.1 25.428 409 245 10 1 351 78 484 6.65e-34 133
Msa0107500 AT3G48280.1 25.485 412 242 12 1 351 77 484 2.14e-33 132
Msa0107500 AT3G48300.1 25.476 420 227 13 2 352 77 479 2.42e-33 131
Msa0107500 AT3G48300.2 25.476 420 227 13 2 352 79 481 2.48e-33 131
Msa0107500 AT2G22330.1 37.725 167 102 1 141 305 288 454 2.85e-33 132
Msa0107500 AT2G22330.2 37.725 167 102 1 141 305 311 477 3.01e-33 132
Msa0107500 AT4G39950.1 38.596 171 95 2 141 305 286 452 3.06e-33 132
Msa0107500 AT4G39950.2 38.596 171 95 2 141 305 326 492 3.37e-33 132
Msa0107500 AT3G48290.1 28.024 339 202 8 1 305 80 410 8.47e-33 130
Msa0107500 AT3G44250.1 27.765 425 227 12 1 351 75 493 1.28e-32 130
Msa0107500 AT5G05260.1 27.187 320 218 4 1 305 91 410 1.99e-32 129
Msa0107500 AT2G30490.1 38.922 167 99 2 141 305 257 422 2.55e-32 129
Msa0107500 AT3G53280.1 28.066 424 228 13 1 352 75 493 4.13e-32 128
Msa0107500 AT2G30750.1 26.442 416 240 10 1 352 80 493 4.72e-32 128
Msa0107500 AT1G74110.1 28.933 356 192 11 2 307 115 459 1.14e-31 127
Msa0107500 AT1G11610.2 24.755 408 241 9 1 344 80 485 1.37e-31 127
Msa0107500 AT3G25180.1 39.865 148 88 1 159 305 282 429 3.05e-31 126
Msa0107500 AT2G25160.1 46.923 130 67 1 178 305 304 433 3.74e-31 126
Msa0107500 AT1G01190.1 27.778 324 198 8 13 306 133 450 6.78e-31 125
Msa0107500 AT1G01190.2 27.778 324 198 8 13 306 138 455 7.77e-31 125
Msa0107500 AT3G26220.1 30.357 336 167 9 61 353 187 498 1.15e-30 124
Msa0107500 AT5G05260.2 37.427 171 97 2 141 305 276 442 1.68e-30 124
Msa0107500 AT3G61880.1 45.522 134 68 2 185 313 326 459 3.80e-30 123
Msa0107500 AT3G61880.2 45.522 134 68 2 185 313 326 459 3.92e-30 123
Msa0107500 AT1G16400.1 30.364 247 131 5 141 349 277 520 2.10e-29 121
Msa0107500 AT4G31950.1 33.597 253 122 8 137 348 251 498 3.18e-29 120
Msa0107500 AT3G48290.2 26.027 365 202 8 1 305 80 436 3.27e-29 120
Msa0107500 AT2G46660.1 25.323 387 221 11 34 358 150 530 7.21e-29 119
Msa0107500 AT1G79370.1 38.816 152 87 1 160 305 302 453 1.49e-28 118
Msa0107500 AT1G58260.1 37.500 168 102 2 141 305 269 436 2.82e-28 117
Msa0107500 AT1G16410.1 29.435 248 130 6 141 348 278 520 1.87e-27 115
Msa0107500 AT3G48320.1 26.829 410 238 11 1 351 79 485 5.05e-27 114
Msa0107500 AT5G09970.1 28.155 309 183 10 36 306 151 458 6.71e-27 114
Msa0107500 AT5G24950.1 23.501 417 252 10 1 352 79 493 3.34e-26 111
Msa0107500 AT1G64940.1 30.263 228 122 5 160 355 286 508 9.41e-26 110
Msa0107500 AT1G64930.1 37.162 148 90 2 160 306 284 429 9.68e-26 110
Msa0107500 AT5G35917.1 33.032 221 124 6 141 355 280 482 4.10e-25 108
Msa0107500 AT4G13310.2 26.923 312 195 8 1 279 79 390 8.60e-25 105
Msa0107500 AT1G13710.1 25.146 342 214 9 2 305 99 436 2.57e-23 103
Msa0107500 AT4G20240.1 35.065 154 95 4 158 307 265 417 3.81e-23 102
Msa0107500 AT1G11600.1 39.259 135 82 0 171 305 293 427 2.29e-22 100
Msa0107500 AT5G25900.1 27.935 247 138 7 135 351 267 503 3.12e-22 99.8
Msa0107500 AT5G24960.1 25.060 415 248 9 1 352 80 494 1.23e-21 97.8
Msa0107500 AT5G42590.1 26.608 342 206 6 1 303 79 414 1.83e-21 97.4
Msa0107500 AT5G61320.1 38.255 149 72 3 160 306 278 408 8.70e-21 95.1
Msa0107500 AT1G64950.1 29.386 228 124 5 160 355 285 507 1.27e-20 94.7
Msa0107500 AT5G04630.1 30.899 178 118 3 133 305 250 427 2.47e-20 94.0
Msa0107500 AT2G12190.1 36.486 148 91 2 160 306 285 430 2.90e-20 94.0
Msa0107500 AT1G16410.2 36.029 136 80 3 141 271 278 411 8.31e-20 91.7
Msa0107500 AT2G25160.2 48.352 91 47 0 178 268 304 394 2.53e-19 90.5
Msa0107500 AT3G53290.1 26.139 417 218 13 4 352 8 402 3.42e-19 89.7
Msa0107500 AT5G04660.1 34.188 117 77 0 189 305 314 430 8.46e-19 89.4
Msa0107500 AT4G15110.1 37.008 127 72 3 186 305 356 481 1.27e-18 89.0
Msa0107500 AT3G10560.1 29.714 175 120 2 133 305 258 431 2.38e-18 87.8
Msa0107500 AT2G45560.2 27.523 218 120 5 1 180 85 302 4.07e-18 85.5
Msa0107500 AT3G10570.1 35.593 118 75 1 189 306 316 432 4.39e-18 87.0
Msa0107500 AT2G45560.3 37.391 115 71 1 1 114 85 199 3.43e-17 81.3
Msa0107500 AT3G53130.1 32.258 155 86 3 184 338 342 477 2.99e-16 81.6
Msa0107500 AT3G25180.2 40.404 99 58 1 159 256 282 380 7.23e-16 79.7
Msa0107500 AT5G52320.2 33.884 121 76 2 186 305 309 426 1.46e-15 79.3
Msa0107500 AT5G52320.1 33.884 121 76 2 186 305 309 426 1.50e-15 79.3
Msa0107500 AT3G53305.1 26.613 372 181 13 1 343 13 321 4.58e-15 76.6
Msa0107500 AT1G57750.2 33.333 132 80 3 176 305 295 420 5.19e-15 77.4
Msa0107500 AT1G57750.1 33.083 133 81 3 176 306 295 421 5.77e-15 77.4
Msa0107500 AT3G03470.1 30.822 146 94 2 167 305 281 426 5.87e-15 77.4
Msa0107500 AT5G23190.1 31.892 185 105 7 141 305 282 465 6.85e-15 77.4
Msa0107500 AT1G24540.1 26.554 177 116 4 143 305 269 445 7.87e-15 77.0
Msa0107500 AT4G20240.2 33.600 125 79 3 158 279 265 388 8.10e-15 76.6
Msa0107500 AT1G64900.1 37.162 148 90 2 160 306 279 424 8.14e-15 77.0
Msa0107500 AT1G19630.3 28.188 149 103 2 159 304 257 404 8.78e-15 76.6
Msa0107500 AT1G19630.2 28.188 149 103 2 159 304 257 404 1.17e-14 76.3
Msa0107500 AT1G19630.1 28.188 149 103 2 159 304 257 404 1.38e-14 76.3
Msa0107500 AT4G39490.1 25.382 327 175 12 43 306 121 441 1.47e-14 76.3
Msa0107500 AT1G05160.2 31.285 179 111 5 134 304 244 418 1.84e-14 75.9
Msa0107500 AT1G05160.1 31.285 179 111 5 134 304 244 418 1.84e-14 75.9
Msa0107500 AT1G47620.1 28.846 156 104 4 157 305 284 439 2.51e-14 75.5
Msa0107500 AT2G32440.2 29.319 191 125 4 133 314 242 431 4.39e-14 74.7
Msa0107500 AT2G32440.1 29.319 191 125 4 133 314 242 431 4.39e-14 74.7
Msa0107500 AT5G02900.1 34.328 134 83 3 177 305 269 402 4.77e-14 74.7
Msa0107500 AT2G44890.1 25.967 181 122 3 137 305 252 432 7.75e-14 73.9
Msa0107500 AT5G08250.2 32.051 156 89 5 165 305 310 463 1.18e-13 73.6
Msa0107500 AT2G26710.1 29.252 147 98 4 159 304 298 439 1.39e-13 73.2
Msa0107500 AT5G08250.1 32.051 156 89 5 165 305 248 401 1.62e-13 72.8
Msa0107500 AT2G45510.1 24.862 181 124 3 137 305 252 432 1.79e-13 72.8
Msa0107500 AT3G56630.1 29.651 172 108 6 141 305 255 420 2.11e-13 72.4
Msa0107500 AT2G44890.2 28.125 160 103 3 158 305 269 428 3.34e-13 72.0
Msa0107500 AT4G39510.1 32.576 132 86 3 177 305 298 429 3.39e-13 72.0
Msa0107500 AT1G13150.1 25.131 191 123 4 135 305 252 442 3.73e-13 72.0
Msa0107500 AT1G34540.1 28.846 156 100 4 157 305 269 420 4.94e-13 71.2
Msa0107500 AT1G65340.1 28.926 121 82 2 186 305 310 427 6.82e-13 70.9
Msa0107500 AT1G13140.1 23.239 284 163 9 126 383 261 515 1.32e-12 70.1
Msa0107500 AT4G32170.1 30.597 134 86 4 177 305 296 427 1.92e-12 69.7
Msa0107500 AT5G58860.1 28.302 159 102 4 159 305 272 430 2.09e-12 69.3
Msa0107500 AT2G21910.1 28.689 122 85 2 186 305 308 429 2.33e-12 69.3
Msa0107500 AT1G31800.1 26.891 119 85 2 186 304 374 490 2.59e-12 69.3
Msa0107500 AT2G23180.1 28.676 136 91 4 177 306 302 437 2.89e-12 68.9
Msa0107500 AT4G39480.1 30.147 136 82 3 184 306 303 438 3.38e-12 68.9
Msa0107500 AT5G24960.2 24.611 321 198 9 1 283 80 394 4.36e-12 68.2
Msa0107500 AT1G13140.2 21.220 377 239 11 43 383 135 489 7.78e-12 67.8
Msa0107500 AT5G35920.1 44.444 63 35 0 243 305 6 68 1.39e-11 63.2
Msa0107500 AT4G39500.1 30.534 131 89 2 177 305 260 390 2.41e-11 66.2
Msa0107500 AT4G39500.2 30.534 131 89 2 177 305 310 440 2.50e-11 66.2
Msa0107500 AT5G38970.2 29.139 151 103 2 158 305 165 314 2.87e-11 65.5
Msa0107500 AT5G38970.4 29.139 151 103 2 158 305 165 314 2.87e-11 65.5
Msa0107500 AT5G38970.1 29.139 151 103 2 158 305 246 395 3.17e-11 65.9
Msa0107500 AT5G38970.3 29.139 151 103 2 158 305 246 395 3.33e-11 65.5
Msa0107500 AT3G14620.1 30.323 155 103 5 153 304 287 439 3.83e-11 65.5
Msa0107500 AT3G14610.1 25.000 172 123 4 137 304 267 436 4.01e-11 65.5
Msa0107500 AT3G26125.1 26.042 192 112 6 141 305 269 457 6.36e-11 65.1
Msa0107500 AT5G38450.1 33.600 125 81 2 186 309 325 448 8.50e-11 64.3

Find 76 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTATTGCTAACTTTAAT+TGG 0.149982 1_3:+18147673 None:intergenic
TTTATTATTGCTTGTAAATA+AGG 0.150921 1_3:+18148104 None:intergenic
AGTTTCCTTTGCCAATAATT+TGG 0.189947 1_3:+18148156 None:intergenic
TCAGAGTTAAACCAAATTAT+TGG 0.201049 1_3:-18148167 Msa0107500:CDS
TGTATTCGACAACATATTAA+TGG 0.205226 1_3:+18149209 None:intergenic
TGATGATGATGTGGCGCTTC+TGG 0.214180 1_3:+18142506 None:intergenic
CTCTCTGGTGAAAATTCATT+TGG 0.221318 1_3:+18147930 None:intergenic
ATGAATATGGATGATAAATT+TGG 0.244209 1_3:-18147733 Msa0107500:CDS
TTCAGTTGATCTTCAGCTTC+TGG 0.254677 1_3:+18142456 None:intergenic
GAAACTGATTTAGAAATAAA+TGG 0.260839 1_3:-18148029 Msa0107500:CDS
CTGGTCACTGGTGAATATTT+TGG 0.263799 1_3:-18149035 Msa0107500:CDS
TTGATTAATGTTTGGGCTAT+TGG 0.267285 1_3:-18147978 Msa0107500:CDS
TTGGAAGAGATTCAAATCTA+TGG 0.271551 1_3:-18147959 Msa0107500:CDS
TACAATTTATTCAGTTGATT+TGG 0.289757 1_3:-18149190 Msa0107500:intron
TAAATCCTAAACTGTAATTA+TGG 0.300818 1_3:+18149415 None:intergenic
CAAACCTGAGGATATGAATA+TGG 0.332702 1_3:-18147746 Msa0107500:CDS
AACCACCATAATTACAGTTT+AGG 0.346143 1_3:-18149420 Msa0107500:CDS
ATCTTCAGCTTCTGGTGAAA+TGG 0.346704 1_3:+18142464 None:intergenic
GTTTCAAAGGTGTTCTTCAT+AGG 0.351616 1_3:-18142287 Msa0107500:CDS
AAGTTTGAAGCGGTTAATAT+TGG 0.371144 1_3:-18149252 Msa0107500:CDS
TGATAAATTTGGACTTACTT+TGG 0.371174 1_3:-18147722 Msa0107500:CDS
TTATTATTGCTTGTAAATAA+GGG 0.377471 1_3:+18148105 None:intergenic
TTAGCACCTTTCATTGCATC+AGG 0.397338 1_3:+18149441 None:intergenic
GGGATTGGTCGTTGATTTGA+AGG 0.403874 1_3:+18149481 None:intergenic
GTCATTTCAAAGGTGTTTGA+AGG 0.427320 1_3:-18142349 Msa0107500:CDS
AACTGAATTTGAGAAATTCA+AGG 0.440191 1_3:-18142440 Msa0107500:CDS
GTTGATTTGAAGGACTGGTT+TGG 0.447479 1_3:+18149491 None:intergenic
AGGAAGTTGGAGGGTTATTG+TGG 0.449988 1_3:-18148963 Msa0107500:CDS
CTATTCTATTAGAGAGGGAT+TGG 0.464078 1_3:+18149466 None:intergenic
ACAACTAATATTTGTTTCAA+AGG 0.464593 1_3:-18142300 Msa0107500:CDS
CATAGGACAACAACCAAATC+AGG 0.467136 1_3:-18142270 Msa0107500:CDS
CAAATCAGGCAAAAGATCAT+TGG 0.472983 1_3:-18142256 Msa0107500:CDS
AAAGGACAGCAAAAGATTAG+TGG 0.476012 1_3:-18142384 Msa0107500:CDS
TGCTAGGACTTGTTCGTGGC+AGG 0.476050 1_3:-18148269 Msa0107500:intron
TATGGATCAAAATTCTTCAA+AGG 0.477480 1_3:-18142402 Msa0107500:CDS
TCATCCATATTCATATCCTC+AGG 0.488432 1_3:+18147742 None:intergenic
CAGTTACTTCAACAATAGAA+TGG 0.499800 1_3:-18148238 Msa0107500:CDS
CTTGATGATGAGAATAATGC+TGG 0.512638 1_3:-18148915 Msa0107500:CDS
TGGTCGTTGATTTGAAGGAC+TGG 0.513266 1_3:+18149486 None:intergenic
ACGGTTGAAGATGAGGAAGT+TGG 0.514225 1_3:-18148976 Msa0107500:CDS
AGTTACTTCAACAATAGAAT+GGG 0.517835 1_3:-18148237 Msa0107500:CDS
TGGAAGAGATTCAAATCTAT+GGG 0.521672 1_3:-18147958 Msa0107500:CDS
GATTTGAAGGACTGGTTTGG+CGG 0.525970 1_3:+18149494 None:intergenic
ATTTGGACTTACTTTGGAGA+AGG 0.528189 1_3:-18147716 Msa0107500:CDS
GGAAGTAATAGTGGAACTGC+TGG 0.530742 1_3:+18148062 None:intergenic
TTAAACCAAATTATTGGCAA+AGG 0.532811 1_3:-18148161 Msa0107500:CDS
TTAGAAGAAGGACTGGTCAC+TGG 0.547599 1_3:-18149047 Msa0107500:CDS
TTCAAGGGTTGGTTGATCAA+CGG 0.549575 1_3:-18148995 Msa0107500:CDS
GTTGAAGATGAGGAAGTTGG+AGG 0.553662 1_3:-18148973 Msa0107500:CDS
ATCCTATCGGTATTAGAAGA+AGG 0.553895 1_3:-18149059 Msa0107500:CDS
ATCGGTATTAGAAGAAGGAC+TGG 0.554655 1_3:-18149054 Msa0107500:CDS
TTGATCAACGGTTGAAGATG+AGG 0.560591 1_3:-18148983 Msa0107500:CDS
TTAATTGGAACAGCTAGCAA+AGG 0.568621 1_3:+18147688 None:intergenic
CAGGGACTATTCTATTAGAG+AGG 0.570905 1_3:+18149460 None:intergenic
TGAGTGTGTGATTCATGTCA+AGG 0.572874 1_3:+18149325 None:intergenic
CTGCTGCTAGGACTTGTTCG+TGG 0.573126 1_3:-18148273 Msa0107500:intron
TGGTGAAATGGCTTCTGATG+AGG 0.574708 1_3:+18142476 None:intergenic
TTTGATTGGGAACTTGATGG+TGG 0.582667 1_3:-18147772 Msa0107500:CDS
AGGGACTATTCTATTAGAGA+GGG 0.586197 1_3:+18149461 None:intergenic
TTAGTTGAAGAATCAGACAT+AGG 0.586441 1_3:-18148134 Msa0107500:CDS
TTATGCATATCTCTCAACGT+TGG 0.592834 1_3:-18149395 Msa0107500:CDS
ATCCTAAACTGTAATTATGG+TGG 0.593620 1_3:+18149418 None:intergenic
TTGAAGATGAGGAAGTTGGA+GGG 0.608240 1_3:-18148972 Msa0107500:CDS
TAAGATTGAACGTTTATCTG+TGG 0.609066 1_3:-18148877 Msa0107500:intron
TTCAACAATAGAATGGGCAA+TGG 0.609121 1_3:-18148231 Msa0107500:CDS
AAGGCATGTGCATTCAAAGG+TGG 0.622451 1_3:-18142330 Msa0107500:CDS
TAGCACCTTTCATTGCATCA+GGG 0.622880 1_3:+18149442 None:intergenic
TACCATAGTTATGTCTTCTG+CGG 0.631331 1_3:-18149520 None:intergenic
TTGAAGGCATGTGCATTCAA+AGG 0.632719 1_3:-18142333 Msa0107500:CDS
GAAGTAATAGTGGAACTGCT+GGG 0.634745 1_3:+18148063 None:intergenic
GTCCTTCTTCTAATACCGAT+AGG 0.637955 1_3:+18149057 None:intergenic
ATAGTCCCTGATGCAATGAA+AGG 0.640878 1_3:-18149447 Msa0107500:CDS
GGCAGCTTCTGATGATGATG+TGG 0.657954 1_3:+18142497 None:intergenic
TAGCGCGGAGAAGTTTGAAG+CGG 0.688043 1_3:-18149262 Msa0107500:CDS
AAACGATATAAACAATAGCG+CGG 0.694100 1_3:-18149277 Msa0107500:CDS
TGATGGTGGAATCAAACCTG+AGG 0.698321 1_3:-18147758 Msa0107500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATATAATATATATA+AGG - chr1_3:18145803-18145822 Msa0107500:intron 0.0%
!! TAATAATATGAGAAAATAAA+TGG + chr1_3:18143149-18143168 None:intergenic 10.0%
!!! TTTTTATTTTTTTGCTATTA+TGG + chr1_3:18143377-18143396 None:intergenic 10.0%
!!! GAAATTTTTGTTTATATTTA+AGG - chr1_3:18144527-18144546 Msa0107500:intron 10.0%
!!! ATACTTTTTTTTTTTTTTGA+AGG - chr1_3:18144645-18144664 Msa0107500:intron 10.0%
!!! AATTTTAATGACATTAAAAA+CGG + chr1_3:18144907-18144926 None:intergenic 10.0%
!! AATATTAATGACATTAAAAA+TGG + chr1_3:18145029-18145048 None:intergenic 10.0%
!!! GAAATTATTTTTCATAATAA+AGG + chr1_3:18145067-18145086 None:intergenic 10.0%
!! ATAAGATATATATAATAAAG+TGG - chr1_3:18146527-18146546 Msa0107500:intron 10.0%
!! ATTATATAAAATATCGTTTA+AGG + chr1_3:18146762-18146781 None:intergenic 10.0%
!!! AAATTACTATTTTTTTTTTG+AGG + chr1_3:18146913-18146932 None:intergenic 10.0%
!!! TAAAATTTATTTTTTTACGT+GGG + chr1_3:18146978-18146997 None:intergenic 10.0%
!!! ATAAAATTTATTTTTTTACG+TGG + chr1_3:18146979-18146998 None:intergenic 10.0%
!! GTTCAAAAAAAAAAAAAAAT+TGG + chr1_3:18147088-18147107 None:intergenic 10.0%
!!! ATGATAGATTTTTTTTTTTT+TGG - chr1_3:18148193-18148212 Msa0107500:CDS 10.0%
!!! TTACAATTTTTAATTGATAA+AGG + chr1_3:18148719-18148738 None:intergenic 10.0%
!!! AGAATTTTTTTTTTGTTTAA+GGG + chr1_3:18148791-18148810 None:intergenic 10.0%
!!! TAGAATTTTTTTTTTGTTTA+AGG + chr1_3:18148792-18148811 None:intergenic 10.0%
!!! TATATTTTTACATCATTAAT+TGG - chr1_3:18149000-18149019 Msa0107500:CDS 10.0%
!! ATTAGTTAGAAATATTATGA+AGG - chr1_3:18142592-18142611 Msa0107500:intron 15.0%
!! ATTAGATAATATAACTTATG+TGG + chr1_3:18142917-18142936 None:intergenic 15.0%
!! TTATTATTGCTTGTAAATAA+GGG + chr1_3:18143623-18143642 None:intergenic 15.0%
!! TTTATTATTGCTTGTAAATA+AGG + chr1_3:18143624-18143643 None:intergenic 15.0%
!!! TGTTTATTAATTGTTTTGAT+TGG - chr1_3:18143939-18143958 Msa0107500:intron 15.0%
!!! GTTTATTAATTGTTTTGATT+GGG - chr1_3:18143940-18143959 Msa0107500:intron 15.0%
!! ATTACAAACAAATTAACAAA+AGG + chr1_3:18144160-18144179 None:intergenic 15.0%
!! TCATTAAAATTAGATTTGAA+TGG - chr1_3:18144916-18144935 Msa0107500:intron 15.0%
!!! CAAATTGTTTTTCATAATAA+AGG + chr1_3:18144945-18144964 None:intergenic 15.0%
!! GAAAAATAATTTCATTTGAA+TGG - chr1_3:18145074-18145093 Msa0107500:intron 15.0%
!! TTTCAAAAAAAAAAAGTCAT+TGG - chr1_3:18145144-18145163 Msa0107500:intron 15.0%
!!! TTTTAAGACACTAAATTATA+AGG + chr1_3:18146335-18146354 None:intergenic 15.0%
!!! TATATCTTTCTTTTTTCAAA+TGG - chr1_3:18146597-18146616 Msa0107500:intron 15.0%
!!! AAAATTTATTTTTTTACGTG+GGG + chr1_3:18146977-18146996 None:intergenic 15.0%
!!! TTTTTTTGAACAAATCAAAA+TGG - chr1_3:18147097-18147116 Msa0107500:intron 15.0%
!!! TAATTTTTGTTTTTTTTCCT+TGG + chr1_3:18147234-18147253 None:intergenic 15.0%
!!! TTAAGCTAAATTCTTTTTTA+TGG + chr1_3:18147334-18147353 None:intergenic 15.0%
!! ATCATTATTTAAAGGTTATT+TGG + chr1_3:18147445-18147464 None:intergenic 15.0%
!! TCTTAATAGAGAAATTAATT+TGG + chr1_3:18147542-18147561 None:intergenic 15.0%
!! TTGTTTATAATTTATGCTTA+GGG + chr1_3:18147615-18147634 None:intergenic 15.0%
!! TTTGTTTATAATTTATGCTT+AGG + chr1_3:18147616-18147635 None:intergenic 15.0%
!!! TTTGTTTATAACTTTTCTTT+TGG + chr1_3:18147716-18147735 None:intergenic 15.0%
!! AGGTATTAAAAATTGTAAAT+TGG - chr1_3:18148940-18148959 Msa0107500:CDS 15.0%
!! TAAATCCTAAACTGTAATTA+TGG + chr1_3:18142313-18142332 None:intergenic 20.0%
!! TACAATTTATTCAGTTGATT+TGG - chr1_3:18142535-18142554 Msa0107500:intron 20.0%
!!! TAGACTAATTTGTTCTTTTA+TGG - chr1_3:18143088-18143107 Msa0107500:intron 20.0%
!!! TAGTTTTACTAAGTTTAGTT+TGG - chr1_3:18143278-18143297 Msa0107500:intron 20.0%
!!! TTTGCTTTTGACATAATATT+TGG + chr1_3:18143537-18143556 None:intergenic 20.0%
!!! GAAACTGATTTAGAAATAAA+TGG - chr1_3:18143696-18143715 Msa0107500:intron 20.0%
!!! ACAAGTTTTGATTAATGTTT+GGG - chr1_3:18143740-18143759 Msa0107500:intron 20.0%
!! ATGAATATGGATGATAAATT+TGG - chr1_3:18143992-18144011 Msa0107500:intron 20.0%
!! CAATTATTGCTAACTTTAAT+TGG + chr1_3:18144055-18144074 None:intergenic 20.0%
!! AAAGCAATGTAAAAATGAAT+TGG - chr1_3:18144215-18144234 Msa0107500:intron 20.0%
!! TACTGAATAAATGAATAAAG+TGG + chr1_3:18144264-18144283 None:intergenic 20.0%
!! TTGAATGTGAGAAAAAAAAA+AGG - chr1_3:18144298-18144317 Msa0107500:intron 20.0%
!!! TTTTTGTTTATATTTAAGGC+TGG - chr1_3:18144531-18144550 Msa0107500:intron 20.0%
!!! GTTTTGACTTATTCTTAAAT+TGG + chr1_3:18144880-18144899 None:intergenic 20.0%
!!! GTTTTGACTTATTCTTAAAT+TGG + chr1_3:18144880-18144899 None:intergenic 20.0%
!! GTATGTATATAGATATAGAT+AGG - chr1_3:18145256-18145275 Msa0107500:intron 20.0%
!! ACATCAAAACAATAAGAAAA+AGG - chr1_3:18145466-18145485 Msa0107500:intron 20.0%
!! ATAAGAAAAAGGAAATATGA+TGG - chr1_3:18145477-18145496 Msa0107500:intron 20.0%
!!! CTAATGATGTTCTTTTAATT+AGG + chr1_3:18145780-18145799 None:intergenic 20.0%
!! TATATATATTCACACAAACA+GGG + chr1_3:18145986-18146005 None:intergenic 20.0%
!! ATATATATATTCACACAAAC+AGG + chr1_3:18145987-18146006 None:intergenic 20.0%
!! TTATATATATCTTATGTCTG+CGG + chr1_3:18146522-18146541 None:intergenic 20.0%
!! TATCGTTTAAGGATATAATT+GGG + chr1_3:18146751-18146770 None:intergenic 20.0%
!! ATATCGTTTAAGGATATAAT+TGG + chr1_3:18146752-18146771 None:intergenic 20.0%
!!! TTTTTGATGGAATCTTTAAA+TGG + chr1_3:18147012-18147031 None:intergenic 20.0%
!! ATCTGTTCATCATTATTTAA+AGG + chr1_3:18147453-18147472 None:intergenic 20.0%
!! AACAATGCATAATAAATGTA+AGG - chr1_3:18147668-18147687 Msa0107500:intron 20.0%
!! TAAAAAAAAAAAGGTTATCG+AGG + chr1_3:18147834-18147853 None:intergenic 20.0%
!!! CTTTTGTCAAATAATTATTG+AGG + chr1_3:18148069-18148088 None:intergenic 20.0%
!! ATACGTAAAATCAAAATTGT+TGG - chr1_3:18148437-18148456 Msa0107500:intron 20.0%
!!! GAAAATTAAGAGCATTTTTT+TGG + chr1_3:18148609-18148628 None:intergenic 20.0%
!! GTATAATTGAGATAATGAAA+AGG + chr1_3:18148769-18148788 None:intergenic 20.0%
!! TCTATAATAAAGATTGTTGT+TGG - chr1_3:18148808-18148827 Msa0107500:intron 20.0%
!! ATGATGTAAAAATATAGTTC+TGG + chr1_3:18148996-18149015 None:intergenic 20.0%
!! ACAACTAATATTTGTTTCAA+AGG - chr1_3:18149425-18149444 Msa0107500:CDS 20.0%
! TGTATTCGACAACATATTAA+TGG + chr1_3:18142519-18142538 None:intergenic 25.0%
! AGAAATATTATGAAGGAAGT+TGG - chr1_3:18142599-18142618 Msa0107500:intron 25.0%
!!! TTTTCCTGTTTTGAAAGTTT+TGG - chr1_3:18142643-18142662 Msa0107500:intron 25.0%
!!! ATAGATAATATCGACTTTTG+TGG - chr1_3:18142981-18143000 Msa0107500:intron 25.0%
!! ATTTTTCCGTGTTCTATAAA+AGG + chr1_3:18143027-18143046 None:intergenic 25.0%
! AATGAATCAAACTTAACAAG+AGG + chr1_3:18143053-18143072 None:intergenic 25.0%
! AGTTACTTCAACAATAGAAT+GGG - chr1_3:18143488-18143507 Msa0107500:intron 25.0%
! TCAGAGTTAAACCAAATTAT+TGG - chr1_3:18143558-18143577 Msa0107500:intron 25.0%
! TTAAACCAAATTATTGGCAA+AGG - chr1_3:18143564-18143583 Msa0107500:intron 25.0%
!!! CACAAGTTTTGATTAATGTT+TGG - chr1_3:18143739-18143758 Msa0107500:intron 25.0%
!!! AAATTTTGAGTTGACACTTT+TGG - chr1_3:18143851-18143870 Msa0107500:intron 25.0%
! TGATAAATTTGGACTTACTT+TGG - chr1_3:18144003-18144022 Msa0107500:intron 25.0%
! TATTGAATAACTCATGTATC+TGG - chr1_3:18144383-18144402 Msa0107500:intron 25.0%
!! TAAACAACATTTCACGTTTT+AGG + chr1_3:18144447-18144466 None:intergenic 25.0%
! CTTGGCAGTTTAATATAATA+GGG + chr1_3:18144694-18144713 None:intergenic 25.0%
! ACTTGGCAGTTTAATATAAT+AGG + chr1_3:18144695-18144714 None:intergenic 25.0%
! TTATATTAAACTGCCAAGTA+CGG - chr1_3:18144696-18144715 Msa0107500:intron 25.0%
!! CATGATTAAGCAGTATATTT+TGG - chr1_3:18144800-18144819 Msa0107500:intron 25.0%
! AAACTAATGACAATAGTCAT+TGG - chr1_3:18145103-18145122 Msa0107500:intron 25.0%
!!! AAAAAAAAAGTCATTGGCTT+TGG - chr1_3:18145150-18145169 Msa0107500:intron 25.0%
! TAGATATAGATAGGAGATAT+AGG - chr1_3:18145265-18145284 Msa0107500:intron 25.0%
! ACTGCTGTAAATAAAAAAGT+AGG + chr1_3:18145351-18145370 None:intergenic 25.0%
!!! TACTTTTTTATTTACAGCAG+TGG - chr1_3:18145350-18145369 Msa0107500:intron 25.0%
! ATATTGAAATGACAGAAACT+TGG - chr1_3:18146003-18146022 Msa0107500:intron 25.0%
! TATTGAAATGACAGAAACTT+GGG - chr1_3:18146004-18146023 Msa0107500:intron 25.0%
! AGACACTAAATTATAAGGTT+GGG + chr1_3:18146330-18146349 None:intergenic 25.0%
! AAGACACTAAATTATAAGGT+TGG + chr1_3:18146331-18146350 None:intergenic 25.0%
! AGAAGAAAATGAATTGCAAA+TGG - chr1_3:18146626-18146645 Msa0107500:intron 25.0%
!!! ATTGAATGCTACTTCAATTT+TGG - chr1_3:18146936-18146955 Msa0107500:intron 25.0%
!!! TTGAATGCTACTTCAATTTT+GGG - chr1_3:18146937-18146956 Msa0107500:intron 25.0%
!!! ATTTTATTTGCCTTGTTAGA+CGG + chr1_3:18147046-18147065 None:intergenic 25.0%
!!! TTTTTGTTTTTTTTCCTTGG+TGG + chr1_3:18147231-18147250 None:intergenic 25.0%
! TCATGATAACAATACCTAAA+TGG - chr1_3:18147291-18147310 Msa0107500:intron 25.0%
! AAATAATGATGAACAGATCA+CGG - chr1_3:18147455-18147474 Msa0107500:intron 25.0%
! AAACTATGCGATCAAATTAT+TGG - chr1_3:18147584-18147603 Msa0107500:intron 25.0%
!!! TATAACTTTTCTTTTGGTTG+TGG + chr1_3:18147710-18147729 None:intergenic 25.0%
! AATTTATGTTACGACTATGA+AGG - chr1_3:18147740-18147759 Msa0107500:CDS 25.0%
! AACAATGCATAATATATGCA+AGG - chr1_3:18147795-18147814 Msa0107500:CDS 25.0%
! TATGTTAATTACGACTATGA+AGG - chr1_3:18147870-18147889 Msa0107500:intron 25.0%
!! AAAACAATGGGTTCAAATTA+TGG + chr1_3:18147988-18148007 None:intergenic 25.0%
! AACTGTCTTAGAAAAACAAT+GGG + chr1_3:18148000-18148019 None:intergenic 25.0%
! TTACTGATCCTAATAATTCA+TGG - chr1_3:18148288-18148307 Msa0107500:intron 25.0%
! GTATGTAACCATGAATTATT+AGG + chr1_3:18148299-18148318 None:intergenic 25.0%
! TAAAATTGCAACTAAATCGA+AGG - chr1_3:18148378-18148397 Msa0107500:intron 25.0%
!!! GTATTCTTATATCGATTCTA+CGG + chr1_3:18148421-18148440 None:intergenic 25.0%
! GTTATCATCAATACTCTTTA+AGG + chr1_3:18148919-18148938 None:intergenic 25.0%
!!! AAAGAGTATTGATGATAACA+AGG - chr1_3:18148920-18148939 Msa0107500:CDS 25.0%
! TAATATTTGTTCAAGTGTAC+AGG - chr1_3:18148969-18148988 Msa0107500:CDS 25.0%
! TAAAGAGCAAAAGAAATCAA+CGG - chr1_3:18149037-18149056 Msa0107500:CDS 25.0%
! AACTGAATTTGAGAAATTCA+AGG - chr1_3:18149285-18149304 Msa0107500:CDS 25.0%
! TATGGATCAAAATTCTTCAA+AGG - chr1_3:18149323-18149342 Msa0107500:CDS 25.0%
AACCACCATAATTACAGTTT+AGG - chr1_3:18142305-18142324 Msa0107500:CDS 30.0%
ATCCTAAACTGTAATTATGG+TGG + chr1_3:18142310-18142329 None:intergenic 30.0%
AAACGATATAAACAATAGCG+CGG - chr1_3:18142448-18142467 Msa0107500:CDS 30.0%
! AAGTTTGAAGCGGTTAATAT+TGG - chr1_3:18142473-18142492 Msa0107500:CDS 30.0%
TTAGTTCAAGTGATATAGCT+GGG - chr1_3:18142558-18142577 Msa0107500:intron 30.0%
!!! TTGAAAGTTTTGGATCCTAT+CGG - chr1_3:18142653-18142672 Msa0107500:intron 30.0%
!!! AAGTTGGTAGGTATTTTTCA+AGG - chr1_3:18142714-18142733 Msa0107500:intron 30.0%
!!! AGTTGGTAGGTATTTTTCAA+GGG - chr1_3:18142715-18142734 Msa0107500:intron 30.0%
TAAGATTGAACGTTTATCTG+TGG - chr1_3:18142848-18142867 Msa0107500:intron 30.0%
!! GTGGTACTGATGTAAAAAAT+GGG + chr1_3:18142898-18142917 None:intergenic 30.0%
!! TGTGGTACTGATGTAAAAAA+TGG + chr1_3:18142899-18142918 None:intergenic 30.0%
TATCTATCAAAGAGTGAAAG+TGG + chr1_3:18142968-18142987 None:intergenic 30.0%
AAAAGGTTGGAGATTGAATT+CGG + chr1_3:18143010-18143029 None:intergenic 30.0%
!!! CTAATTTGTTTTCCTCACAA+TGG + chr1_3:18143119-18143138 None:intergenic 30.0%
! CGGAGAGTTCAAATATTTTA+TGG - chr1_3:18143331-18143350 Msa0107500:intron 30.0%
CAGTTACTTCAACAATAGAA+TGG - chr1_3:18143487-18143506 Msa0107500:intron 30.0%
AGTTTCCTTTGCCAATAATT+TGG + chr1_3:18143572-18143591 None:intergenic 30.0%
TTAGTTGAAGAATCAGACAT+AGG - chr1_3:18143591-18143610 Msa0107500:intron 30.0%
! AAATCAGTTTCAGCTTTTCT+TGG + chr1_3:18143687-18143706 None:intergenic 30.0%
TTGATTAATGTTTGGGCTAT+TGG - chr1_3:18143747-18143766 Msa0107500:intron 30.0%
TTGGAAGAGATTCAAATCTA+TGG - chr1_3:18143766-18143785 Msa0107500:intron 30.0%
TGGAAGAGATTCAAATCTAT+GGG - chr1_3:18143767-18143786 Msa0107500:intron 30.0%
! TTTTCACCAGAGAGATTTTT+AGG - chr1_3:18143804-18143823 Msa0107500:intron 30.0%
! TTTCACCAGAGAGATTTTTA+GGG - chr1_3:18143805-18143824 Msa0107500:intron 30.0%
!!! GGGTCAGATATTGATTTTAA+AGG - chr1_3:18143825-18143844 Msa0107500:intron 30.0%
!!! TAGGGTTTTGTTTTTGATGT+TGG - chr1_3:18143913-18143932 Msa0107500:intron 30.0%
!!! AGGGTTTTGTTTTTGATGTT+GGG - chr1_3:18143914-18143933 Msa0107500:intron 30.0%
! TTTTATCATCTAATGCAGCA+TGG - chr1_3:18144126-18144145 Msa0107500:intron 30.0%
!! TAAAGTTGATATAGTCCCTT+TGG - chr1_3:18144326-18144345 Msa0107500:intron 30.0%
TTGTTTATACTTGAGATCGA+TGG - chr1_3:18144460-18144479 Msa0107500:intron 30.0%
TCAAACAGTATAAATGTAGC+TGG + chr1_3:18144509-18144528 None:intergenic 30.0%
TTAAGGCTGGAGTAATAATA+AGG - chr1_3:18144544-18144563 Msa0107500:intron 30.0%
TATATTAAACTGCCAAGTAC+GGG - chr1_3:18144697-18144716 Msa0107500:intron 30.0%
AATGATGATTGCAAACACAA+CGG + chr1_3:18145681-18145700 None:intergenic 30.0%
AAGGAATATTATTAGCGTAC+AGG - chr1_3:18145822-18145841 Msa0107500:intron 30.0%
AAATACAAGAAGAGCAATCA+AGG - chr1_3:18145891-18145910 Msa0107500:intron 30.0%
GTCAAGAAGATACAAAGAAA+TGG + chr1_3:18145944-18145963 None:intergenic 30.0%
AACGTTTCTATTCAAAAGAG+AGG - chr1_3:18146031-18146050 Msa0107500:intron 30.0%
!!! ACTTGCTTACTGCTTTTTTT+AGG - chr1_3:18146279-18146298 Msa0107500:intron 30.0%
AGAATATACTTTGCACTTTG+TGG + chr1_3:18146390-18146409 None:intergenic 30.0%
CAAAGTGCAAAGTATATTCT+AGG - chr1_3:18146390-18146409 Msa0107500:intron 30.0%
!! TGCAAAGTATATTCTAGGAT+AGG - chr1_3:18146395-18146414 Msa0107500:intron 30.0%
!! TATATTCTAGGATAGGAAGT+AGG - chr1_3:18146402-18146421 Msa0107500:intron 30.0%
AATTAACATGATACCCACAA+TGG + chr1_3:18146460-18146479 None:intergenic 30.0%
!! TTTTATTTGCCTTGTTAGAC+GGG + chr1_3:18147045-18147064 None:intergenic 30.0%
ACAAGGCAAATAAAATGATG+TGG - chr1_3:18147050-18147069 Msa0107500:intron 30.0%
! TTAGGTATTGTTATCATGAC+TGG + chr1_3:18147290-18147309 None:intergenic 30.0%
CATTCGTATCTTTAACAATG+TGG + chr1_3:18147387-18147406 None:intergenic 30.0%
! CATTGTAAGTTTAGTTCAGT+TGG - chr1_3:18147641-18147660 Msa0107500:intron 30.0%
ACGACTATGAAGGAAAATAA+AGG - chr1_3:18147750-18147769 Msa0107500:CDS 30.0%
TTATGCATTGTTCTTACCAA+GGG + chr1_3:18147787-18147806 None:intergenic 30.0%
ATTATGCATTGTTCTTACCA+AGG + chr1_3:18147788-18147807 None:intergenic 30.0%
ACGACTATGAAGGAAAATAA+AGG - chr1_3:18147750-18147769 Msa0107500:CDS 30.0%
CAACTGTCTTAGAAAAACAA+TGG + chr1_3:18148001-18148020 None:intergenic 30.0%
!!! CATTGTTTTTCTAAGACAGT+TGG - chr1_3:18147999-18148018 Msa0107500:CDS 30.0%
ATGCATATTTGATCATCTGA+CGG - chr1_3:18148127-18148146 Msa0107500:CDS 30.0%
TGGATTATTGGGAAAAGAAT+AGG + chr1_3:18148244-18148263 None:intergenic 30.0%
TCAGTAACATCTGGATTATT+GGG + chr1_3:18148255-18148274 None:intergenic 30.0%
ATCAGTAACATCTGGATTAT+TGG + chr1_3:18148256-18148275 None:intergenic 30.0%
TCCAGATGTTACTGATAAAT+TGG - chr1_3:18148260-18148279 Msa0107500:CDS 30.0%
CCAGATGTTACTGATAAATT+GGG - chr1_3:18148261-18148280 Msa0107500:CDS 30.0%
ATGTTACTGATAAATTGGGA+AGG - chr1_3:18148265-18148284 Msa0107500:CDS 30.0%
GACAATGCATAAAATATGCA+AGG - chr1_3:18148558-18148577 Msa0107500:intron 30.0%
!!! TAAGAGCATTTTTTTGGTAG+TGG + chr1_3:18148603-18148622 None:intergenic 30.0%
!! ATATTCGACATTGATTCTGT+TGG - chr1_3:18148870-18148889 Msa0107500:intron 30.0%
!! AGGATTCAAGAGTTGTTTTA+TGG - chr1_3:18149305-18149324 Msa0107500:CDS 30.0%
! AGATTAGTGGAATTTTGCAA+CGG - chr1_3:18149354-18149373 Msa0107500:CDS 30.0%
CTATTCTATTAGAGAGGGAT+TGG + chr1_3:18142262-18142281 None:intergenic 35.0%
AGGGACTATTCTATTAGAGA+GGG + chr1_3:18142267-18142286 None:intergenic 35.0%
TTATGCATATCTCTCAACGT+TGG - chr1_3:18142330-18142349 Msa0107500:CDS 35.0%
GTTAGTTCAAGTGATATAGC+TGG - chr1_3:18142557-18142576 Msa0107500:intron 35.0%
TAGTTCAAGTGATATAGCTG+GGG - chr1_3:18142559-18142578 Msa0107500:intron 35.0%
GGATCCAAAACTTTCAAAAC+AGG + chr1_3:18142650-18142669 None:intergenic 35.0%
ATCCTATCGGTATTAGAAGA+AGG - chr1_3:18142666-18142685 Msa0107500:intron 35.0%
! TGGTCACTGGTGAATATTTT+GGG - chr1_3:18142691-18142710 Msa0107500:intron 35.0%
!! TGGTGAATATTTTGGGAAGT+TGG - chr1_3:18142698-18142717 Msa0107500:intron 35.0%
!! GAATATTTTGGGAAGTTGGT+AGG - chr1_3:18142702-18142721 Msa0107500:intron 35.0%
!! CTTGATGATGAGAATAATGC+TGG - chr1_3:18142810-18142829 Msa0107500:intron 35.0%
!!! GATAATATCGACTTTTGTGG+TGG - chr1_3:18142984-18143003 Msa0107500:intron 35.0%
! CTCCAACCTTTTATAGAACA+CGG - chr1_3:18143018-18143037 Msa0107500:intron 35.0%
TTCCGTGTTCTATAAAAGGT+TGG + chr1_3:18143023-18143042 None:intergenic 35.0%
TTTATGGAAATGCCATTGTG+AGG - chr1_3:18143104-18143123 Msa0107500:intron 35.0%
TTTCTCTTACACTTGACATG+AGG - chr1_3:18143238-18143257 Msa0107500:intron 35.0%
! CACATTCAAACTATGGATTG+TGG + chr1_3:18143307-18143326 None:intergenic 35.0%
TTCAACAATAGAATGGGCAA+TGG - chr1_3:18143494-18143513 Msa0107500:intron 35.0%
! GCTTTTCTTGGAAGTAATAG+TGG + chr1_3:18143675-18143694 None:intergenic 35.0%
CTCTCTGGTGAAAATTCATT+TGG + chr1_3:18143798-18143817 None:intergenic 35.0%
!!! TTTTGAGTTGACACTTTTGG+TGG - chr1_3:18143854-18143873 Msa0107500:intron 35.0%
AATTTGTCCTGGTTTACCAT+TGG - chr1_3:18143886-18143905 Msa0107500:intron 35.0%
! TGGTTTACCATTGGCTATTA+GGG - chr1_3:18143895-18143914 Msa0107500:intron 35.0%
AACAAAACCCTAATAGCCAA+TGG + chr1_3:18143905-18143924 None:intergenic 35.0%
!!! TGTTTTGATTGGGAACTTGA+TGG - chr1_3:18143950-18143969 Msa0107500:intron 35.0%
CAAACCTGAGGATATGAATA+TGG - chr1_3:18143979-18143998 Msa0107500:intron 35.0%
TCATCCATATTCATATCCTC+AGG + chr1_3:18143986-18144005 None:intergenic 35.0%
! ATTTGGACTTACTTTGGAGA+AGG - chr1_3:18144009-18144028 Msa0107500:intron 35.0%
TTAATTGGAACAGCTAGCAA+AGG + chr1_3:18144040-18144059 None:intergenic 35.0%
TTCTCACATTCAAGATCAGA+AGG + chr1_3:18144291-18144310 None:intergenic 35.0%
TACTTGCAATTGAGACCAAA+GGG + chr1_3:18144344-18144363 None:intergenic 35.0%
TTACTTGCAATTGAGACCAA+AGG + chr1_3:18144345-18144364 None:intergenic 35.0%
TACGATTAATTTCCCGTACT+TGG + chr1_3:18144712-18144731 None:intergenic 35.0%
!! ATGACAATAGTCATTGGCTT+TGG - chr1_3:18145109-18145128 Msa0107500:intron 35.0%
GAAAATAATAGACTGCCAAG+TGG - chr1_3:18145175-18145194 Msa0107500:intron 35.0%
TTCCAAGTAGTTAATCCACT+TGG + chr1_3:18145193-18145212 None:intergenic 35.0%
AGATAGGAGATATAGGAGAT+AGG - chr1_3:18145272-18145291 Msa0107500:intron 35.0%
TTGCAATCATCATTACAAGC+AGG - chr1_3:18145687-18145706 Msa0107500:intron 35.0%
TTGTATTTGCAGGAGATATG+TGG + chr1_3:18145879-18145898 None:intergenic 35.0%
ATTGCTCTTCTTGTATTTGC+AGG + chr1_3:18145889-18145908 None:intergenic 35.0%
TATACTTTGCACTTTGTGGT+AGG + chr1_3:18146386-18146405 None:intergenic 35.0%
ACATTCGTGAAACTCTTGTT+CGG - chr1_3:18146662-18146681 Msa0107500:intron 35.0%
GATGGAATCTTTAAATGGCA+AGG + chr1_3:18147007-18147026 None:intergenic 35.0%
! TTTATTTGCCTTGTTAGACG+GGG + chr1_3:18147044-18147063 None:intergenic 35.0%
CACAATCATTTACAGAGACA+TGG - chr1_3:18147184-18147203 Msa0107500:intron 35.0%
!!! TGTTTTTTTTCCTTGGTGGT+TGG + chr1_3:18147227-18147246 None:intergenic 35.0%
ATTACATGACACCCATACAA+AGG - chr1_3:18147250-18147269 Msa0107500:intron 35.0%
ACTTCTTACAGTTACTCACT+TGG + chr1_3:18147489-18147508 None:intergenic 35.0%
!!! AATTTGGCTTTTGCTTTTCC+TGG + chr1_3:18147526-18147545 None:intergenic 35.0%
! GTAAGTTTAGTTCAGTTGGT+AGG - chr1_3:18147645-18147664 Msa0107500:intron 35.0%
!! AACTTTTCTTTTGGTTGTGG+AGG + chr1_3:18147707-18147726 None:intergenic 35.0%
TCTATTCAGACTGCAACATA+TGG - chr1_3:18147926-18147945 Msa0107500:CDS 35.0%
!!! TTTTCTAAGACAGTTGGAAG+AGG - chr1_3:18148005-18148024 Msa0107500:CDS 35.0%
ATTACCTCTTGCTAACTTCA+TGG + chr1_3:18148037-18148056 None:intergenic 35.0%
CCCAATTTATCAGTAACATC+TGG + chr1_3:18148264-18148283 None:intergenic 35.0%
! CAATATCGAGATTTTGCTTC+AGG - chr1_3:18148326-18148345 Msa0107500:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr1_3:18148563-18148582 Msa0107500:intron 35.0%
!!! AGCATTTTTTTGGTAGTGGT+CGG + chr1_3:18148599-18148618 None:intergenic 35.0%
AAAGGACAGCAAAAGATTAG+TGG - chr1_3:18149341-18149360 Msa0107500:CDS 35.0%
! TTTTGCAACGGTCATTTCAA+AGG - chr1_3:18149366-18149385 Msa0107500:CDS 35.0%
!! GTCATTTCAAAGGTGTTTGA+AGG - chr1_3:18149376-18149395 Msa0107500:CDS 35.0%
!! GTTTCAAAGGTGTTCTTCAT+AGG - chr1_3:18149438-18149457 Msa0107500:CDS 35.0%
! CAATGATCTTTTGCCTGATT+TGG + chr1_3:18149471-18149490 None:intergenic 35.0%
CAAATCAGGCAAAAGATCAT+TGG - chr1_3:18149469-18149488 Msa0107500:CDS 35.0%
!! GTTGATTTGAAGGACTGGTT+TGG + chr1_3:18142237-18142256 None:intergenic 40.0%
CAGGGACTATTCTATTAGAG+AGG + chr1_3:18142268-18142287 None:intergenic 40.0%
ATAGTCCCTGATGCAATGAA+AGG - chr1_3:18142278-18142297 Msa0107500:CDS 40.0%
TAGCACCTTTCATTGCATCA+GGG + chr1_3:18142286-18142305 None:intergenic 40.0%
TTAGCACCTTTCATTGCATC+AGG + chr1_3:18142287-18142306 None:intergenic 40.0%
TGAGTGTGTGATTCATGTCA+AGG + chr1_3:18142403-18142422 None:intergenic 40.0%
TGATATAGCTGGGGAGTTTA+AGG - chr1_3:18142568-18142587 Msa0107500:intron 40.0%
GTCCTTCTTCTAATACCGAT+AGG + chr1_3:18142671-18142690 None:intergenic 40.0%
ATCGGTATTAGAAGAAGGAC+TGG - chr1_3:18142671-18142690 Msa0107500:intron 40.0%
! CTGGTCACTGGTGAATATTT+TGG - chr1_3:18142690-18142709 Msa0107500:intron 40.0%
!!! GGTAGGTATTTTTCAAGGGT+TGG - chr1_3:18142719-18142738 Msa0107500:intron 40.0%
!! TTCAAGGGTTGGTTGATCAA+CGG - chr1_3:18142730-18142749 Msa0107500:intron 40.0%
TTGATCAACGGTTGAAGATG+AGG - chr1_3:18142742-18142761 Msa0107500:intron 40.0%
TTGAAGATGAGGAAGTTGGA+GGG - chr1_3:18142753-18142772 Msa0107500:intron 40.0%
CACATGTGCTATATGTGTCA+CGG - chr1_3:18142938-18142957 Msa0107500:intron 40.0%
CCATAGTTTGAATGTGACTG+CGG - chr1_3:18143311-18143330 Msa0107500:intron 40.0%
! TTGTTGTTGTTACTGCTGCT+AGG - chr1_3:18143440-18143459 Msa0107500:intron 40.0%
! GAAGTAATAGTGGAACTGCT+GGG + chr1_3:18143665-18143684 None:intergenic 40.0%
TCTGACCCTAAAAATCTCTC+TGG + chr1_3:18143813-18143832 None:intergenic 40.0%
CTAATAGCCAATGGTAAACC+AGG + chr1_3:18143896-18143915 None:intergenic 40.0%
! CTGGTTTACCATTGGCTATT+AGG - chr1_3:18143894-18143913 Msa0107500:intron 40.0%
TTTGATTGGGAACTTGATGG+TGG - chr1_3:18143953-18143972 Msa0107500:intron 40.0%
GTGACTAGTGAGAATGTTAG+TGG - chr1_3:18144183-18144202 Msa0107500:intron 40.0%
CCTTTCAATCCTGAAGAACT+CGG - chr1_3:18144582-18144601 Msa0107500:intron 40.0%
!! TGCCAAGTGGATTAACTACT+TGG - chr1_3:18145188-18145207 Msa0107500:intron 40.0%
! CAACAACAATACTGCTGCTT+CGG - chr1_3:18145630-18145649 Msa0107500:intron 40.0%
TAACATGATACCCACAATGG+TGG + chr1_3:18146457-18146476 None:intergenic 40.0%
GGAATCTTTAAATGGCAAGG+TGG + chr1_3:18147004-18147023 None:intergenic 40.0%
!!! GGGGTTAAGGTTGTTTTTGA+TGG + chr1_3:18147025-18147044 None:intergenic 40.0%
! ACTTTTAGCACACTTTGTGC+GGG + chr1_3:18147153-18147172 None:intergenic 40.0%
! CACTTTTAGCACACTTTGTG+CGG + chr1_3:18147154-18147173 None:intergenic 40.0%
ATTGTTATCATGACTGGTGG+CGG + chr1_3:18147284-18147303 None:intergenic 40.0%
GGTATTGTTATCATGACTGG+TGG + chr1_3:18147287-18147306 None:intergenic 40.0%
TCTTCGAATCGTGTCCATTT+AGG + chr1_3:18147308-18147327 None:intergenic 40.0%
!! TATTTGGCTTGCATGTGCTT+GGG + chr1_3:18147429-18147448 None:intergenic 40.0%
!! TTATTTGGCTTGCATGTGCT+TGG + chr1_3:18147430-18147449 None:intergenic 40.0%
TCTTACAGTTACTCACTTGG+CGG + chr1_3:18147486-18147505 None:intergenic 40.0%
AAGTGATCAACAAGAGATCC+AGG - chr1_3:18147505-18147524 Msa0107500:intron 40.0%
AAAGGTTAAAAGCAAGCCCT+TGG - chr1_3:18147768-18147787 Msa0107500:CDS 40.0%
GGTTATCGAGGTTTGAATCA+TGG + chr1_3:18147822-18147841 None:intergenic 40.0%
AGTCTGAATAGAGCTCTGTT+GGG + chr1_3:18147918-18147937 None:intergenic 40.0%
ATGACCATGAAGTTAGCAAG+AGG - chr1_3:18148030-18148049 Msa0107500:CDS 40.0%
TGCATACAAACGAAGCTTCA+TGG + chr1_3:18148112-18148131 None:intergenic 40.0%
ATGCATTGTCCTAACCAACT+GGG + chr1_3:18148548-18148567 None:intergenic 40.0%
TATGCATTGTCCTAACCAAC+TGG + chr1_3:18148549-18148568 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr1_3:18148564-18148583 Msa0107500:intron 40.0%
!!! CATTTTTTTGGTAGTGGTCG+GGG + chr1_3:18148597-18148616 None:intergenic 40.0%
!!! GCATTTTTTTGGTAGTGGTC+GGG + chr1_3:18148598-18148617 None:intergenic 40.0%
ATCTTCAGCTTCTGGTGAAA+TGG + chr1_3:18149264-18149283 None:intergenic 40.0%
TTCAGTTGATCTTCAGCTTC+TGG + chr1_3:18149272-18149291 None:intergenic 40.0%
! TTGAAGGCATGTGCATTCAA+AGG - chr1_3:18149392-18149411 Msa0107500:CDS 40.0%
CATAGGACAACAACCAAATC+AGG - chr1_3:18149455-18149474 Msa0107500:CDS 40.0%
!! GATTTGAAGGACTGGTTTGG+CGG + chr1_3:18142234-18142253 None:intergenic 45.0%
!! TGGTCGTTGATTTGAAGGAC+TGG + chr1_3:18142242-18142261 None:intergenic 45.0%
!! GGGATTGGTCGTTGATTTGA+AGG + chr1_3:18142247-18142266 None:intergenic 45.0%
!! TTAGAAGAAGGACTGGTCAC+TGG - chr1_3:18142678-18142697 Msa0107500:intron 45.0%
ACGGTTGAAGATGAGGAAGT+TGG - chr1_3:18142749-18142768 Msa0107500:intron 45.0%
GTTGAAGATGAGGAAGTTGG+AGG - chr1_3:18142752-18142771 Msa0107500:intron 45.0%
AGGAAGTTGGAGGGTTATTG+TGG - chr1_3:18142762-18142781 Msa0107500:intron 45.0%
ACTTGACATGAGGTCAAGCA+AGG - chr1_3:18143248-18143267 Msa0107500:intron 45.0%
CCGCAGTCACATTCAAACTA+TGG + chr1_3:18143314-18143333 None:intergenic 45.0%
! GGAAGTAATAGTGGAACTGC+TGG + chr1_3:18143666-18143685 None:intergenic 45.0%
!! TGAGTTGACACTTTTGGTGG+TGG - chr1_3:18143857-18143876 Msa0107500:intron 45.0%
!! GAGTTGACACTTTTGGTGGT+GGG - chr1_3:18143858-18143877 Msa0107500:intron 45.0%
!! TGATGGTGGAATCAAACCTG+AGG - chr1_3:18143967-18143986 Msa0107500:intron 45.0%
CCGAGTTCTTCAGGATTGAA+AGG + chr1_3:18144585-18144604 None:intergenic 45.0%
! AAGAACTCGGTTCGAGACTT+TGG - chr1_3:18144595-18144614 Msa0107500:intron 45.0%
GAAGATGACACTCGTGATAG+CGG + chr1_3:18146433-18146452 None:intergenic 45.0%
TGTCATCTTCACCACCATTG+TGG - chr1_3:18146443-18146462 Msa0107500:intron 45.0%
GTCATCTTCACCACCATTGT+GGG - chr1_3:18146444-18146463 Msa0107500:intron 45.0%
AACCTTAACCCCGTCTAACA+AGG - chr1_3:18147033-18147052 Msa0107500:intron 45.0%
! CTTTTAGCACACTTTGTGCG+GGG + chr1_3:18147152-18147171 None:intergenic 45.0%
ATGACACCCATACAAAGGAG+AGG - chr1_3:18147255-18147274 Msa0107500:intron 45.0%
TGACACCCATACAAAGGAGA+GGG - chr1_3:18147256-18147275 Msa0107500:intron 45.0%
CTTGGGCAATATGGAAGGAA+AGG + chr1_3:18147412-18147431 None:intergenic 45.0%
ATGTGCTTGGGCAATATGGA+AGG + chr1_3:18147417-18147436 None:intergenic 45.0%
TTGCATGTGCTTGGGCAATA+TGG + chr1_3:18147421-18147440 None:intergenic 45.0%
CTTACAGTTACTCACTTGGC+GGG + chr1_3:18147485-18147504 None:intergenic 45.0%
GGTTGTGGAGGTTTGAATCT+TGG + chr1_3:18147695-18147714 None:intergenic 45.0%
GTCTGAATAGAGCTCTGTTG+GGG + chr1_3:18147917-18147936 None:intergenic 45.0%
CAGTCTGAATAGAGCTCTGT+TGG + chr1_3:18147919-18147938 None:intergenic 45.0%
! TTCAGGAGCATATTGCCTTC+AGG + chr1_3:18149081-18149100 None:intergenic 45.0%
CACTTTACTCACTTCAGGAG+CGG + chr1_3:18149129-18149148 None:intergenic 45.0%
!! AGGAGCACTTTACTCACTTC+AGG + chr1_3:18149134-18149153 None:intergenic 45.0%
!! TCAGGAGCACTTATTTCGTC+AGG + chr1_3:18149172-18149191 None:intergenic 45.0%
!! CTTCAGGAGCACTAATCTTC+AGG + chr1_3:18149190-18149209 None:intergenic 45.0%
TTAGTGCTCCTGAAGACTAG+AGG - chr1_3:18149195-18149214 Msa0107500:CDS 45.0%
TGGTGAAATGGCTTCTGATG+AGG + chr1_3:18149252-18149271 None:intergenic 45.0%
AAGGCATGTGCATTCAAAGG+TGG - chr1_3:18149395-18149414 Msa0107500:CDS 45.0%
!! TTAAAGTTAAATATTAATAT+TGG + chr1_3:18145407-18145426 None:intergenic 5.0%
!!! TTTAACTTTAAATAATTATT+TGG - chr1_3:18145416-18145435 Msa0107500:intron 5.0%
!! AAAAAAAAAATATAATAAAG+TGG - chr1_3:18146559-18146578 Msa0107500:intron 5.0%
!!! AATTTATTACATTTTTTAAA+CGG + chr1_3:18146699-18146718 None:intergenic 5.0%
!!! ATTTTTTTTTATTATATTGT+TGG - chr1_3:18146822-18146841 Msa0107500:intron 5.0%
!! ATTTGTTTATAAAAAAAAAA+AGG + chr1_3:18147843-18147862 None:intergenic 5.0%
!!! CATTTTATTTTATTTTATTT+TGG + chr1_3:18148176-18148195 None:intergenic 5.0%
TAGCGCGGAGAAGTTTGAAG+CGG - chr1_3:18142463-18142482 Msa0107500:CDS 50.0%
TGACATGAGGTCAAGCAAGG+AGG - chr1_3:18143251-18143270 Msa0107500:intron 50.0%
GGTGGGAGAAGAATTTGTCC+TGG - chr1_3:18143875-18143894 Msa0107500:intron 50.0%
AGTCTCGAACCGAGTTCTTC+AGG + chr1_3:18144594-18144613 None:intergenic 50.0%
AACACAACGGCTATGCGAGA+GGG + chr1_3:18145668-18145687 None:intergenic 50.0%
AAACACAACGGCTATGCGAG+AGG + chr1_3:18145669-18145688 None:intergenic 50.0%
! GCATCGGTCCATGTCAACAT+GGG + chr1_3:18145716-18145735 None:intergenic 50.0%
! TGCATCGGTCCATGTCAACA+TGG + chr1_3:18145717-18145736 None:intergenic 50.0%
ATGTTGACATGGACCGATGC+AGG - chr1_3:18145716-18145735 Msa0107500:intron 50.0%
! TGCCTTGTTAGACGGGGTTA+AGG + chr1_3:18147038-18147057 None:intergenic 50.0%
! TGTGCGGGGTGATTCACTTT+TGG + chr1_3:18147138-18147157 None:intergenic 50.0%
TGAGCTTAGCCCAGTTGGTT+AGG - chr1_3:18148536-18148555 Msa0107500:intron 50.0%
TGAAGCTTAGACGCTCCTGA+AGG - chr1_3:18149063-18149082 Msa0107500:CDS 50.0%
!! TCAGGAGCGCTTTAGTCTTC+AGG + chr1_3:18149154-18149173 None:intergenic 50.0%
! CTTCTGGACCTCTAGTCTTC+AGG + chr1_3:18149206-18149225 None:intergenic 50.0%
! TGATGATGATGTGGCGCTTC+TGG + chr1_3:18149222-18149241 None:intergenic 50.0%
! GGCAGCTTCTGATGATGATG+TGG + chr1_3:18149231-18149250 None:intergenic 50.0%
! CTGCTGCTAGGACTTGTTCG+TGG - chr1_3:18143452-18143471 Msa0107500:intron 55.0%
! TGCTAGGACTTGTTCGTGGC+AGG - chr1_3:18143456-18143475 Msa0107500:intron 55.0%
ACACAACGGCTATGCGAGAG+GGG + chr1_3:18145667-18145686 None:intergenic 55.0%
GCAGGAGACCCATGTTGACA+TGG - chr1_3:18145705-18145724 Msa0107500:intron 55.0%
TTGACATGGACCGATGCAGG+TGG - chr1_3:18145719-18145738 Msa0107500:intron 55.0%
GTCGTACGTACCACCTGCAT+CGG + chr1_3:18145732-18145751 None:intergenic 55.0%
AAGCAAGTGAGCGCGTTCGT+GGG + chr1_3:18146267-18146286 None:intergenic 55.0%
TAAGCAAGTGAGCGCGTTCG+TGG + chr1_3:18146268-18146287 None:intergenic 55.0%
!! GATGACACTCGTGATAGCGG+TGG + chr1_3:18146430-18146449 None:intergenic 55.0%
CGGCACCCTCTCCTTTGTAT+GGG + chr1_3:18147264-18147283 None:intergenic 55.0%
AGTGGTCGGGGTTTGAATCC+CGG + chr1_3:18148585-18148604 None:intergenic 55.0%
!!! CAGGAGCGCTTTTCGTCTTC+AGG + chr1_3:18149098-18149117 None:intergenic 55.0%
TTCAGGAGCGGCTTGACTTC+AGG + chr1_3:18149117-18149136 None:intergenic 55.0%
GCGGCACCCTCTCCTTTGTA+TGG + chr1_3:18147265-18147284 None:intergenic 60.0%
TGGGCTAAGCTCACGAGGAC+GGG + chr1_3:18148529-18148548 None:intergenic 60.0%
CTGGGCTAAGCTCACGAGGA+CGG + chr1_3:18148530-18148549 None:intergenic 60.0%
CCAACTGGGCTAAGCTCACG+AGG + chr1_3:18148534-18148553 None:intergenic 60.0%
CCTCGTGAGCTTAGCCCAGT+TGG - chr1_3:18148531-18148550 Msa0107500:intron 60.0%
GGCTAAGCTCACGAGGACGG+GGG + chr1_3:18148527-18148546 None:intergenic 65.0%
GGGCTAAGCTCACGAGGACG+GGG + chr1_3:18148528-18148547 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 18142215 18149532 18142215 ID=Msa0107500;Name=Msa0107500
chr1_3 mRNA 18142215 18149532 18142215 ID=Msa0107500-mRNA-1;Parent=Msa0107500;Name=Msa0107500-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.25|0|0.8|1|1|5|0|459
chr1_3 exon 18149191 18149532 18149191 ID=Msa0107500-mRNA-1:exon:6717;Parent=Msa0107500-mRNA-1
chr1_3 exon 18148878 18149087 18148878 ID=Msa0107500-mRNA-1:exon:6716;Parent=Msa0107500-mRNA-1
chr1_3 exon 18147921 18148285 18147921 ID=Msa0107500-mRNA-1:exon:6715;Parent=Msa0107500-mRNA-1
chr1_3 exon 18147687 18147831 18147687 ID=Msa0107500-mRNA-1:exon:6714;Parent=Msa0107500-mRNA-1
chr1_3 exon 18142215 18142532 18142215 ID=Msa0107500-mRNA-1:exon:6713;Parent=Msa0107500-mRNA-1
chr1_3 CDS 18149191 18149532 18149191 ID=Msa0107500-mRNA-1:cds;Parent=Msa0107500-mRNA-1
chr1_3 CDS 18148878 18149087 18148878 ID=Msa0107500-mRNA-1:cds;Parent=Msa0107500-mRNA-1
chr1_3 CDS 18147921 18148285 18147921 ID=Msa0107500-mRNA-1:cds;Parent=Msa0107500-mRNA-1
chr1_3 CDS 18147687 18147831 18147687 ID=Msa0107500-mRNA-1:cds;Parent=Msa0107500-mRNA-1
chr1_3 CDS 18142215 18142532 18142215 ID=Msa0107500-mRNA-1:cds;Parent=Msa0107500-mRNA-1
Gene Sequence

>Msa0107500

ATGTCTTCTGCGGAAACCGCCAAACCAGTCCTTCAAATCAACGACCAATCCCTCTCTAATAGAATAGTCCCTGATGCAATGAAAGGTGCTAACCACCATAATTACAGTTTAGGATTTATGCATATCTCTCAACGTTGGAAAGACATCAGAAAAATATGCAACAACTTATTATTCTCGAACAAAAACCTTGACATGAATCACACACTCAGACAGAAGAAGATTCTCGAACTTTCAAACGATATAAACAATAGCGCGGAGAAGTTTGAAGCGGTTAATATTGGAAGACTTGCTTTTAAAACAACCATTAATATGTTGTCGAATACAATTTATTCAGTTGATTTGTTTTGGATCCTATCGGTATTAGAAGAAGGACTGGTCACTGGTGAATATTTTGGGAAGTTGGTAGGTATTTTTCAAGGGTTGGTTGATCAACGGTTGAAGATGAGGAAGTTGGAGGGTTATTGTGGTAAAAGTGATATGTTAGATGATATGCTTGATGATGAGAATAATGCTGGAGAGATGTATAAAGATAAGATTGAACGTTTATCTGTGGACTTGTTCGTGGCAGGAACTGACACAGTTACTTCAACAATAGAATGGGCAATGGCTGAATTACTTCACAATCCAAATATTATGTCAAAAGCAAAATCAGAGTTAAACCAAATTATTGGCAAAGGAAACTTAGTTGAAGAATCAGACATAGGAAAACTCCCTTATTTACAAGCAATAATAAAAGAAACTTTCAGATTACACCCAGCAGTTCCACTATTACTTCCAAGAAAAGCTGAAACTGATTTAGAAATAAATGGTTATAAAGTAGCAAAAGATTCACAAGTTTTGATTAATGTTTGGGCTATTGGAAGAGATTCAAATCTATGGGAAAATCCAAATGAATTTTCACCAGAGAGATTTTTAGGGGTTTTGTTTTTGATGTTGGGTTTGTTTATTAATTGTTTTGATTGGGAACTTGATGGTGGAATCAAACCTGAGGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAGGCTCAACCTTTGCTAGCTGTTCCAATTAAAAGGTCCAGAAGCGCCACATCATCATCAGAAGCTGCCTCATCAGAAGCCATTTCACCAGAAGCTGAAGATCAACTGAATTTGAGAAATTCAAGGATTCAAGAGTTGTTTTATGGATCAAAATTCTTCAAAGGACAGCAAAAGATTAGTGGAATTTTGCAACGGTCATTTCAAAGGTGTTTGAAGGCATGTGCATTCAAAGGTGGCAATTTCACAACTAATATTTGTTTCAAAGGTGTTCTTCATAGGACAACAACCAAATCAGGCAAAAGATCATTGGTGAAAGATCAAGCTTCAACAACGACTCTTTTGATGCGCTGA
Protein sequence

>Msa0107500

MSSAETAKPVLQINDQSLSNRIVPDAMKGANHHNYSLGFMHISQRWKDIRKICNNLLFSNKNLDMNHTLRQKKILELSNDINNSAEKFEAVNIGRLAFKTTINMLSNTIYSVDLFWILSVLEEGLVTGEYFGKLVGIFQGLVDQRLKMRKLEGYCGKSDMLDDMLDDENNAGEMYKDKIERLSVDLFVAGTDTVTSTIEWAMAELLHNPNIMSKAKSELNQIIGKGNLVEESDIGKLPYLQAIIKETFRLHPAVPLLLPRKAETDLEINGYKVAKDSQVLINVWAIGRDSNLWENPNEFSPERFLGVLFLMLGLFINCFDWELDGGIKPEDMNMDDKFGLTLEKAQPLLAVPIKRSRSATSSSEAASSEAISPEAEDQLNLRNSRIQELFYGSKFFKGQQKISGILQRSFQRCLKACAFKGGNFTTNICFKGVLHRTTTKSGKRSLVKDQASTTTLLMR*