AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0113690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113690 MtrunA17_Chr1g0171451 93.353 677 11 2 1 644 1 676 0.0 1289
Msa0113690 MtrunA17_Chr1g0179331 51.230 691 250 8 32 640 128 813 0.0 645
Msa0113690 MtrunA17_Chr5g0427651 39.800 701 309 13 35 640 222 904 1.13e-154 469
Msa0113690 MtrunA17_Chr3g0132791 50.355 282 107 1 392 640 630 911 7.27e-88 293
Msa0113690 MtrunA17_Chr3g0132791 39.935 308 160 6 19 321 179 466 3.53e-56 205
Msa0113690 MtrunA17_Chr8g0392871 46.129 310 120 4 366 639 696 994 1.54e-82 280
Msa0113690 MtrunA17_Chr8g0392871 31.673 281 167 6 40 310 102 367 5.63e-32 132
Msa0113690 MtrunA17_Chr1g0191171 49.818 275 100 3 402 640 676 948 9.96e-82 277
Msa0113690 MtrunA17_Chr1g0191171 34.965 286 148 8 41 308 88 353 1.67e-36 146
Msa0113690 MtrunA17_Chr6g0482711 48.727 275 103 3 407 645 652 924 1.07e-80 274
Msa0113690 MtrunA17_Chr6g0482711 32.740 281 164 6 40 310 101 366 2.56e-32 133
Msa0113690 MtrunA17_Chr1g0151541 48.746 279 105 3 399 641 647 923 1.20e-78 268
Msa0113690 MtrunA17_Chr1g0151541 33.721 258 154 4 42 290 82 331 1.86e-33 137
Msa0113690 MtrunA17_Chr2g0294351 47.253 273 109 2 400 639 451 721 1.97e-72 248
Msa0113690 MtrunA17_Chr4g0068411 46.442 267 106 3 398 629 441 705 3.86e-68 236
Msa0113690 MtrunA17_Chr5g0397931 41.353 266 121 2 409 641 417 680 1.46e-61 217
Msa0113690 MtrunA17_Chr4g0041201 40.299 268 125 3 403 639 535 798 2.37e-57 207
Msa0113690 MtrunA17_Chr2g0325851 39.623 265 125 3 403 636 545 805 1.65e-56 205
Msa0113690 MtrunA17_Chr5g0406251 36.154 260 136 5 409 639 289 547 2.44e-47 175
Msa0113690 MtrunA17_Chr3g0143531 34.375 256 138 4 413 639 23 277 1.61e-43 158
Msa0113690 MtrunA17_Chr1g0211611 35.341 249 131 4 420 639 306 553 2.45e-41 158
Msa0113690 MtrunA17_Chr2g0305141 31.081 370 200 12 319 641 990 1351 2.63e-36 146
Msa0113690 MtrunA17_Chr4g0065211 33.829 269 130 7 421 644 1127 1392 5.01e-36 145
Msa0113690 MtrunA17_Chr4g0075541 31.690 284 155 5 390 638 64 343 5.72e-36 139
Msa0113690 MtrunA17_Chr4g0059121 31.481 270 148 4 404 638 47 314 9.10e-36 138
Msa0113690 MtrunA17_Chr1g0202101 33.463 257 136 6 407 632 275 527 5.64e-35 139
Msa0113690 MtrunA17_Chr4g0047191 30.797 276 152 4 401 639 30 303 5.28e-34 133
Msa0113690 MtrunA17_Chr4g0047211 30.797 276 152 4 401 639 25 298 5.86e-34 132
Msa0113690 MtrunA17_Chr3g0090261 30.519 308 173 7 368 637 33 337 1.14e-33 132
Msa0113690 MtrunA17_Chr2g0310781 33.088 272 133 8 417 643 848 1115 1.58e-33 137
Msa0113690 MtrunA17_Chr3g0117731 31.734 271 142 6 405 637 47 312 1.93e-33 131
Msa0113690 MtrunA17_Chr4g0072741 32.593 270 134 8 421 645 841 1107 2.04e-33 137
Msa0113690 MtrunA17_Chr2g0310761 28.535 389 214 12 311 643 829 1209 2.05e-33 137
Msa0113690 MtrunA17_Chr2g0282321 32.841 271 143 4 406 639 152 420 8.75e-33 132
Msa0113690 MtrunA17_Chr1g0196631 32.584 267 130 9 421 641 906 1168 1.48e-32 134
Msa0113690 MtrunA17_Chr8g0357611 31.716 268 135 7 421 643 1376 1640 2.62e-32 134
Msa0113690 MtrunA17_Chr6g0461841 32.955 264 129 7 421 639 973 1233 3.11e-32 134
Msa0113690 MtrunA17_Chr3g0117811 29.310 290 150 5 404 639 49 337 2.40e-30 122
Msa0113690 MtrunA17_Chr4g0047201 30.258 271 150 4 406 639 191 459 1.64e-29 122
Msa0113690 MtrunA17_Chr4g0059181 29.097 299 139 5 404 639 78 366 1.72e-29 120
Msa0113690 MtrunA17_Chr6g0450871 29.524 315 158 6 379 639 45 349 2.07e-29 120
Msa0113690 MtrunA17_Chr7g0244621 29.252 294 161 8 389 640 22 310 5.71e-29 119
Msa0113690 MtrunA17_Chr4g0042731 31.274 259 141 5 421 642 149 407 7.61e-28 116
Msa0113690 MtrunA17_Chr3g0136131 31.387 274 137 8 413 637 85 356 5.03e-27 113
Msa0113690 MtrunA17_Chr1g0205071 26.059 307 171 4 388 639 51 356 2.78e-26 111
Msa0113690 MtrunA17_Chr2g0284901 32.103 271 143 7 409 639 142 411 1.73e-24 107
Msa0113690 MtrunA17_Chr1g0157231 30.000 220 121 6 409 599 140 355 2.84e-24 105
Msa0113690 MtrunA17_Chr8g0380551 27.839 273 149 7 414 642 223 491 5.35e-24 106
Msa0113690 MtrunA17_Chr5g0443471 30.357 280 146 7 400 639 157 427 4.05e-23 103
Msa0113690 MtrunA17_Chr3g0137191 29.520 271 137 6 421 640 72 339 4.89e-23 101
Msa0113690 MtrunA17_Chr5g0394681 25.552 317 171 5 381 639 55 364 5.30e-23 101
Msa0113690 MtrunA17_Chr3g0116981 27.402 281 153 11 403 636 10 286 9.36e-21 94.4
Msa0113690 MtrunA17_Chr6g0449241 26.855 283 158 10 405 641 12 291 8.01e-20 91.7
Msa0113690 MtrunA17_Chr8g0388891 26.214 309 164 9 368 637 84 367 1.01e-19 92.0
Msa0113690 MtrunA17_Chr2g0299331 64.407 59 19 1 522 580 2 58 1.20e-18 80.1
Msa0113690 MtrunA17_Chr2g0317001 28.947 266 136 10 419 644 19 271 2.80e-18 89.4
Msa0113690 MtrunA17_Chr4g0044691 27.881 269 139 7 421 638 331 595 5.83e-17 84.7
Msa0113690 MtrunA17_Chr2g0297961 31.088 193 93 7 421 576 80 269 8.53e-17 83.2
Msa0113690 MtrunA17_Chr7g0215641 26.667 285 146 11 406 641 473 743 1.03e-16 84.3
Msa0113690 MtrunA17_Chr2g0297911 26.766 269 142 10 421 637 81 346 1.04e-16 82.8
Msa0113690 MtrunA17_Chr4g0038501 24.111 253 159 5 413 633 18 269 1.26e-16 84.3
Msa0113690 MtrunA17_Chr8g0345801 28.218 202 111 5 414 582 14 214 1.83e-16 80.1
Msa0113690 MtrunA17_Chr4g0038091 24.111 253 159 5 413 633 18 269 5.64e-16 82.4
Msa0113690 MtrunA17_Chr1g0171571 27.451 306 146 9 408 645 24 321 1.95e-15 80.1
Msa0113690 MtrunA17_Chr3g0105891 24.503 302 165 12 378 636 299 580 3.44e-15 79.0
Msa0113690 MtrunA17_Chr5g0441021 27.113 284 137 10 421 639 76 354 4.02e-15 77.8
Msa0113690 MtrunA17_Chr4g0048951 29.779 272 137 8 421 644 124 389 1.29e-14 76.6
Msa0113690 MtrunA17_Chr1g0172951 26.766 269 148 7 421 640 349 617 1.41e-14 77.4
Msa0113690 MtrunA17_Chr4g0001331 27.309 249 140 9 421 633 26 269 1.08e-13 73.9
Msa0113690 MtrunA17_Chr4g0042441 28.125 192 102 5 421 576 506 697 1.41e-13 74.3
Msa0113690 MtrunA17_Chr8g0379931 28.519 270 134 13 421 637 716 979 1.45e-13 74.3
Msa0113690 MtrunA17_Chr5g0416311 25.704 284 144 10 421 641 82 361 4.26e-13 71.6
Msa0113690 MtrunA17_Chr5g0431191 31.579 95 61 1 548 638 491 585 5.35e-13 72.0
Msa0113690 MtrunA17_Chr1g0165941 43.860 57 32 0 562 618 12 68 1.47e-12 63.2
Msa0113690 MtrunA17_Chr2g0288841 25.926 243 136 7 421 628 11 244 1.73e-12 70.1
Msa0113690 MtrunA17_Chr7g0244521 25.806 248 147 8 421 634 18 262 4.17e-12 68.9
Msa0113690 MtrunA17_Chr4g0048641 31.395 172 100 5 421 580 494 659 6.94e-12 68.9
Msa0113690 MtrunA17_Chr8g0341081 25.098 255 158 9 417 641 50 301 4.12e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113690 AT5G03730.2 53.625 662 242 9 37 643 161 812 0.0 624
Msa0113690 AT5G03730.1 53.625 662 242 9 37 643 161 812 0.0 624
Msa0113690 AT4G24480.2 38.493 730 331 14 10 640 217 927 5.66e-150 458
Msa0113690 AT4G24480.3 38.493 730 331 14 10 640 217 927 6.05e-150 458
Msa0113690 AT4G24480.1 38.231 735 331 15 10 640 217 932 1.79e-147 452
Msa0113690 AT1G08720.1 49.815 271 101 2 402 639 656 924 1.19e-81 277
Msa0113690 AT1G08720.1 32.107 299 182 6 41 331 76 361 8.18e-35 142
Msa0113690 AT1G18160.1 51.515 264 93 2 409 639 709 970 1.27e-81 278
Msa0113690 AT1G18160.1 32.014 278 170 4 28 298 99 364 4.67e-30 127
Msa0113690 AT1G73660.1 48.013 302 117 4 372 639 708 1003 5.59e-81 276
Msa0113690 AT1G73660.1 33.208 265 154 4 42 298 139 388 2.44e-30 128
Msa0113690 AT5G11850.1 50.000 264 97 2 409 639 603 864 5.94e-79 269
Msa0113690 AT5G11850.1 35.385 260 147 4 42 290 92 341 1.82e-36 147
Msa0113690 AT5G49470.1 47.101 276 109 3 399 639 186 459 3.57e-77 254
Msa0113690 AT1G08720.2 50.988 253 89 2 402 621 656 906 1.04e-76 263
Msa0113690 AT1G08720.2 32.107 299 182 6 41 331 76 361 6.19e-35 142
Msa0113690 AT5G49470.7 47.101 276 109 3 399 639 346 619 7.19e-76 255
Msa0113690 AT5G49470.4 47.101 276 109 3 399 639 447 720 5.96e-75 255
Msa0113690 AT5G49470.3 47.101 276 109 3 399 639 473 746 6.31e-75 256
Msa0113690 AT1G18160.2 51.220 246 85 2 409 621 709 952 6.16e-74 256
Msa0113690 AT1G18160.2 32.014 278 170 4 28 298 99 364 3.86e-30 127
Msa0113690 AT1G67890.1 46.014 276 111 4 399 639 469 741 1.08e-70 244
Msa0113690 AT3G06620.1 44.203 276 117 3 399 639 476 749 2.53e-69 240
Msa0113690 AT3G06630.2 43.636 275 118 3 400 639 417 689 2.38e-68 236
Msa0113690 AT3G06640.2 43.985 266 114 2 407 639 438 701 2.89e-67 234
Msa0113690 AT3G06640.3 43.985 266 114 2 407 639 438 701 2.89e-67 234
Msa0113690 AT3G06640.1 43.985 266 114 2 407 639 438 701 2.97e-67 234
Msa0113690 AT4G23050.1 42.049 283 128 3 391 640 444 723 7.92e-67 233
Msa0113690 AT4G23050.2 42.049 283 128 3 391 640 445 724 8.30e-67 233
Msa0113690 AT1G67890.4 46.484 256 99 4 399 619 341 593 1.45e-65 227
Msa0113690 AT1G67890.3 46.484 256 99 4 399 619 469 721 1.04e-64 227
Msa0113690 AT1G67890.2 46.484 256 99 4 399 619 469 721 1.04e-64 227
Msa0113690 AT3G06630.1 45.490 255 102 3 400 619 417 669 1.15e-64 226
Msa0113690 AT3G58640.1 41.132 265 121 3 403 636 541 801 1.51e-60 217
Msa0113690 AT3G58640.2 41.132 265 121 3 403 636 541 801 1.51e-60 217
Msa0113690 AT2G31010.1 40.377 265 123 3 403 636 507 767 1.67e-58 210
Msa0113690 AT2G31010.2 40.377 265 123 3 403 636 507 767 1.67e-58 210
Msa0113690 AT5G49470.5 46.256 227 85 3 399 590 473 697 7.96e-54 196
Msa0113690 AT5G49470.6 46.018 226 85 3 399 589 473 696 3.80e-53 194
Msa0113690 AT3G06630.6 44.248 226 89 3 400 590 333 556 3.21e-52 189
Msa0113690 AT3G06630.4 44.248 226 89 3 400 590 417 640 1.78e-51 189
Msa0113690 AT3G06630.3 44.248 226 89 3 400 590 417 640 1.78e-51 189
Msa0113690 AT3G06630.5 44.248 226 89 3 400 590 417 640 1.78e-51 189
Msa0113690 AT2G42640.1 37.786 262 127 4 406 637 519 774 2.97e-49 184
Msa0113690 AT2G42640.4 37.786 262 127 4 406 637 481 736 3.76e-49 183
Msa0113690 AT2G17700.1 29.891 368 214 8 317 645 182 544 1.19e-42 162
Msa0113690 AT4G35780.1 32.576 264 148 5 406 640 283 545 1.37e-41 159
Msa0113690 AT4G38470.1 34.615 260 140 5 409 639 284 542 1.95e-40 156
Msa0113690 AT5G49470.2 58.974 117 48 0 523 639 691 807 2.16e-40 158
Msa0113690 AT5G49470.2 49.038 104 51 1 399 500 470 573 9.19e-22 100
Msa0113690 AT4G38470.2 34.615 260 140 5 409 639 284 542 2.23e-40 155
Msa0113690 AT3G06630.7 42.424 198 77 3 400 562 417 612 8.39e-39 152
Msa0113690 AT5G57610.1 33.083 266 130 8 421 641 787 1049 1.49e-34 141
Msa0113690 AT2G35050.1 32.721 272 133 8 417 643 977 1243 3.18e-34 140
Msa0113690 AT2G35050.2 32.721 272 133 8 417 643 977 1243 3.18e-34 140
Msa0113690 AT1G16270.1 34.586 266 125 8 417 637 866 1127 1.80e-33 137
Msa0113690 AT1G16270.2 34.586 266 125 8 417 637 866 1127 1.80e-33 137
Msa0113690 AT1G16270.3 34.586 266 125 8 417 637 866 1127 1.80e-33 137
Msa0113690 AT1G79570.2 33.969 262 125 7 421 637 970 1228 3.32e-33 137
Msa0113690 AT1G79570.1 33.969 262 125 7 421 637 970 1228 3.32e-33 137
Msa0113690 AT1G62400.1 31.481 270 148 4 404 638 75 342 6.19e-33 131
Msa0113690 AT1G04700.1 31.698 265 131 7 421 639 772 1032 1.58e-32 135
Msa0113690 AT1G04700.2 31.698 265 131 7 421 639 772 1032 1.58e-32 135
Msa0113690 AT3G46920.2 34.091 264 126 8 421 639 878 1138 9.36e-32 132
Msa0113690 AT3G46920.1 34.091 264 126 8 421 639 812 1072 1.01e-31 132
Msa0113690 AT4G31170.7 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.6 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.5 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.1 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.2 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.3 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT4G31170.8 29.010 293 158 7 391 644 116 397 1.14e-31 128
Msa0113690 AT5G58950.1 31.365 271 147 5 406 639 198 466 1.39e-31 129
Msa0113690 AT4G38470.3 35.000 220 111 6 409 599 284 500 2.43e-30 125
Msa0113690 AT3G01490.1 29.730 296 153 4 398 639 91 385 9.10e-30 122
Msa0113690 AT2G24360.1 28.025 314 169 7 370 637 83 385 3.13e-29 120
Msa0113690 AT3G24715.1 31.008 258 128 8 421 632 842 1095 7.29e-29 123
Msa0113690 AT3G24715.3 31.008 258 128 8 421 632 842 1095 7.29e-29 123
Msa0113690 AT3G24715.2 31.008 258 128 8 421 632 842 1095 7.29e-29 123
Msa0113690 AT1G14000.1 31.250 256 139 4 421 639 168 423 1.82e-28 119
Msa0113690 AT5G50000.1 29.352 293 136 6 409 639 76 359 1.88e-28 118
Msa0113690 AT4G14780.1 27.682 289 154 4 405 639 51 338 1.58e-27 115
Msa0113690 AT4G18950.2 31.206 282 143 9 400 642 150 419 6.86e-27 114
Msa0113690 AT4G18950.1 31.206 282 143 9 400 642 150 419 1.33e-26 114
Msa0113690 AT3G63260.1 26.543 324 171 7 375 639 50 365 5.07e-26 111
Msa0113690 AT5G01850.1 29.286 280 154 9 402 639 5 282 7.50e-26 109
Msa0113690 AT3G46930.2 29.787 282 139 8 403 639 191 458 1.88e-25 111
Msa0113690 AT3G46930.1 29.787 282 139 8 403 639 156 423 2.20e-25 110
Msa0113690 AT3G22750.1 25.503 298 150 4 405 639 64 352 3.38e-24 105
Msa0113690 AT2G43850.3 30.916 262 134 6 425 642 205 463 8.47e-24 105
Msa0113690 AT2G43850.1 30.916 262 134 6 425 642 205 463 8.70e-24 105
Msa0113690 AT2G43850.2 30.980 255 129 6 432 642 212 463 1.18e-23 105
Msa0113690 AT3G58760.1 29.496 278 155 8 402 639 151 427 2.11e-22 101
Msa0113690 AT3G58760.3 29.391 279 156 8 401 639 213 490 3.35e-22 101
Msa0113690 AT3G58760.5 29.391 279 156 8 401 639 213 490 3.35e-22 101
Msa0113690 AT3G01490.2 29.880 251 121 4 398 594 91 340 6.56e-22 98.2
Msa0113690 AT3G50730.1 28.289 304 155 13 385 640 12 300 1.20e-21 97.8
Msa0113690 AT5G40540.1 28.808 302 150 15 392 639 3 293 1.90e-21 97.1
Msa0113690 AT5G01850.2 26.974 304 154 10 402 639 5 306 5.17e-21 95.5
Msa0113690 AT5G50000.2 29.461 241 113 5 409 594 76 314 3.50e-20 92.8
Msa0113690 AT3G27560.1 26.923 286 146 11 404 636 11 286 7.46e-20 92.0
Msa0113690 AT2G42640.3 41.237 97 57 0 406 502 519 615 1.06e-19 94.0
Msa0113690 AT3G15220.1 31.923 260 136 9 419 644 19 271 2.62e-19 92.8
Msa0113690 AT5G50180.1 26.894 264 148 8 415 636 20 280 6.57e-19 89.0
Msa0113690 AT1G53570.5 28.125 224 148 5 421 634 220 440 1.69e-18 90.1
Msa0113690 AT3G50720.1 27.554 323 173 11 362 640 6 311 2.13e-18 88.2
Msa0113690 AT1G53165.2 30.451 266 132 11 419 644 19 271 1.75e-17 87.0
Msa0113690 AT1G53165.3 30.451 266 132 11 419 644 19 271 1.87e-17 87.0
Msa0113690 AT1G53165.1 30.451 266 132 11 419 644 19 271 1.97e-17 86.7
Msa0113690 AT3G58760.6 31.628 215 108 6 402 578 151 364 2.54e-17 84.7
Msa0113690 AT3G58760.2 31.628 215 108 6 402 578 214 427 4.06e-17 84.7
Msa0113690 AT3G58760.4 31.628 215 108 6 402 578 214 427 4.06e-17 84.7
Msa0113690 AT1G79570.4 33.684 190 78 7 421 565 970 1156 6.82e-17 85.5
Msa0113690 AT1G79570.5 33.684 190 78 7 421 565 970 1156 6.82e-17 85.5
Msa0113690 AT3G07980.1 25.490 255 153 7 413 633 18 269 7.35e-17 85.5
Msa0113690 AT3G07980.2 25.490 255 153 7 413 633 18 269 7.83e-17 85.5
Msa0113690 AT5G40540.4 29.365 252 124 12 392 596 3 247 3.65e-16 79.7
Msa0113690 AT3G13530.1 24.111 253 159 5 413 633 18 269 4.64e-16 83.2
Msa0113690 AT5G58520.1 26.190 252 143 8 428 641 357 603 1.42e-15 80.9
Msa0113690 AT2G25880.2 30.539 167 106 4 413 576 23 182 2.46e-15 77.0
Msa0113690 AT4G08500.1 27.935 247 141 10 421 633 339 582 1.30e-13 74.3
Msa0113690 AT5G01810.1 27.778 252 137 9 421 634 18 262 6.25e-13 71.6
Msa0113690 AT5G01810.2 27.778 252 137 9 421 634 18 262 6.25e-13 71.6
Msa0113690 AT5G38240.3 30.392 204 103 9 417 586 273 471 6.62e-13 72.0
Msa0113690 AT4G31170.9 27.919 197 96 6 391 552 116 301 6.69e-13 70.5
Msa0113690 AT4G31170.10 27.919 197 96 6 391 552 116 301 6.69e-13 70.5
Msa0113690 AT4G31170.4 27.919 197 96 6 391 552 116 301 6.69e-13 70.5
Msa0113690 AT5G38240.2 30.392 204 103 9 417 586 319 517 8.60e-13 72.0
Msa0113690 AT5G38240.1 30.392 204 103 9 417 586 337 535 8.65e-13 72.0
Msa0113690 AT5G01810.3 27.778 252 137 9 421 634 18 262 9.40e-13 70.9
Msa0113690 AT4G08470.1 27.419 248 141 10 421 633 309 552 6.72e-12 68.9
Msa0113690 AT4G08470.3 26.996 263 152 11 406 633 213 470 1.39e-11 67.8
Msa0113690 AT1G34210.1 27.737 274 143 10 418 637 308 580 8.65e-11 65.5
Msa0113690 AT1G34210.2 27.737 274 143 10 418 637 308 580 8.65e-11 65.5

Find 178 sgRNAs with CRISPR-Local

Find 1263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCAATCCAATCGCTTCT+TGG 0.169405 1_3:+29693683 Msa0113690:CDS
ATCCAATCGCTTCTTGGATT+TGG 0.194032 1_3:+29693689 Msa0113690:CDS
AATCACTTTCACACCGGTTT+TGG 0.232248 1_3:+29693763 Msa0113690:CDS
ATCTTTCCTGACCAGGTAAA+TGG 0.234135 1_3:+29694219 Msa0113690:intron
GCTTCTTGTATAGTGCAATT+TGG 0.260572 1_3:+29695114 Msa0113690:CDS
CTTCTTCTTCTTTCAAGAGC+TGG 0.264659 1_3:+29693586 Msa0113690:CDS
AATGGCCCAATTGTATTTCT+TGG 0.265818 1_3:+29697048 Msa0113690:CDS
TCTGTTACTATTGATAATTT+TGG 0.267330 1_3:-29701635 None:intergenic
TATTAAGTCTTTCAAGTAAC+TGG 0.270249 1_3:+29694457 Msa0113690:CDS
CTACTTGCTCACCACCATTT+TGG 0.272481 1_3:-29693402 None:intergenic
TCTTCCGACGAGGAAAATTT+AGG 0.284706 1_3:+29694631 Msa0113690:CDS
AGTTCACCTTTGATGACTTC+TGG 0.298215 1_3:-29706535 None:intergenic
TCCAAACATTGTACTTCTAA+TGG 0.306270 1_3:+29701595 Msa0113690:CDS
ACTTGGATTACAGTTTATTC+AGG 0.307495 1_3:+29708819 Msa0113690:three_prime_UTR
ATGCATCCATCCCGTGAATT+AGG 0.314439 1_3:-29694281 None:intergenic
ACTTCTGGTGCCATCCATTC+AGG 0.323918 1_3:-29706520 None:intergenic
CTGATCAGTTGCATCTTTGA+TGG 0.334565 1_3:-29694484 None:intergenic
ATATCATATATAACATTAAA+AGG 0.337987 1_3:-29709802 None:intergenic
TTAAGTTAAAAGAGGAAAGT+TGG 0.348451 1_3:+29693425 Msa0113690:five_prime_UTR
TCTTACTGAACGCACCTATA+TGG 0.353399 1_3:-29698755 None:intergenic
CCCATTAGAAGTACAATGTT+TGG 0.354786 1_3:-29701596 None:intergenic
TAATGATCATATCTTACTTC+GGG 0.356298 1_3:+29709884 Msa0113690:three_prime_UTR
GCCTTGAGAGAACTGCTAAC+TGG 0.362157 1_3:+29694432 Msa0113690:CDS
AGACCAGCAGAGCTCAATTA+AGG 0.363030 1_3:-29708375 None:intergenic
TTCTTCTTCTTTCAAGAGCT+GGG 0.365101 1_3:+29693587 Msa0113690:CDS
GTATATTCAGCTGTTTCAAC+TGG 0.366760 1_3:-29697019 None:intergenic
TTGTTTGAGAGAGCTGAGAT+AGG 0.372354 1_3:+29693473 Msa0113690:five_prime_UTR
TAAGTTAAAAGAGGAAAGTT+GGG 0.377616 1_3:+29693426 Msa0113690:five_prime_UTR
TCGAATAATTCACTACTGAT+TGG 0.381267 1_3:-29698987 None:intergenic
CTATATTATACTATTTACTT+TGG 0.383607 1_3:+29709852 Msa0113690:three_prime_UTR
TAGAAACTCTTCAAATCGTT+CGG 0.389648 1_3:-29701391 None:intergenic
TGGTGTAATCTTGTGGGAAC+TGG 0.393497 1_3:+29706588 Msa0113690:CDS
TGACCTTGAGGAGGAGGATC+TGG 0.396757 1_3:+29699020 Msa0113690:CDS
ACTGCCTCCATGGTTGTTGA+AGG 0.402660 1_3:-29706615 None:intergenic
CTGCCTTAATTGAGCTCTGC+TGG 0.403646 1_3:+29708372 Msa0113690:CDS
TACTCTGACAAAGTTCTAGA+TGG 0.408190 1_3:+29694252 Msa0113690:CDS
GGGAGTTAAGTTTGCGAAAG+AGG 0.408267 1_3:+29693446 Msa0113690:five_prime_UTR
GTTTCAACTGGCTTGAACCT+TGG 0.409838 1_3:-29697007 None:intergenic
CAGCTTTGGTGTAATCTTGT+GGG 0.410216 1_3:+29706582 Msa0113690:CDS
TTGCAAATCTTGTTTGTAGT+AGG 0.416842 1_3:+29694508 Msa0113690:CDS
CTTCAGCAAACTGAAATGTT+TGG 0.420528 1_3:+29698708 Msa0113690:CDS
CTTGTGTTTGAGACCACGTC+AGG 0.421797 1_3:+29697088 Msa0113690:CDS
TGAGAAGCGTCGTTTAAGTA+TGG 0.425065 1_3:+29701819 Msa0113690:CDS
CTCAACATTGTCATTACAAT+GGG 0.425900 1_3:+29709951 Msa0113690:three_prime_UTR
ATATTGAACAATATTATACT+TGG 0.427067 1_3:+29708802 Msa0113690:three_prime_UTR
CTGCAAACATTTCATAATGT+AGG 0.429013 1_3:-29708725 None:intergenic
CAGTGTATCATTCTTCCAAT+TGG 0.429190 1_3:+29694697 Msa0113690:CDS
GATTGTCCAAGAAATACAAT+TGG 0.430286 1_3:-29697054 None:intergenic
ATCAGGTTGGCATGTATCCC+CGG 0.432496 1_3:-29696933 None:intergenic
CAGGAGGTACTGTTGATTGT+AGG 0.435550 1_3:+29698673 Msa0113690:intron
TGAAAGTGATTGAGGGGAAT+CGG 0.440351 1_3:-29693751 None:intergenic
CCAAACATTGTACTTCTAAT+GGG 0.441035 1_3:+29701596 Msa0113690:CDS
TCAACTCAGGTATGTGACTT+TGG 0.447038 1_3:+29706347 Msa0113690:intron
TTGAACCTTGGATGACATAA+TGG 0.449304 1_3:-29696995 None:intergenic
AAACTCTAAATCAGCCTGAA+TGG 0.449450 1_3:+29706506 Msa0113690:intron
GCAGAATTCACTGAAGAATC+AGG 0.454417 1_3:-29696950 None:intergenic
GACATTAGTGATTCAAATGA+TGG 0.455196 1_3:-29694348 None:intergenic
CCTTGAGAGAACTGCTAACT+GGG 0.455830 1_3:+29694433 Msa0113690:CDS
CTTTCATCTAAAACAGCTGC+TGG 0.457184 1_3:+29706398 Msa0113690:CDS
CCAACGGGTAAGCTTCCAAT+TGG 0.458781 1_3:-29694712 None:intergenic
GAGGAGAAACAAGACCAAAA+TGG 0.460381 1_3:+29693388 Msa0113690:five_prime_UTR
GAGAAAGAAGGCCGCCTCCT+TGG 0.466171 1_3:-29708703 None:intergenic
CATACCAACATTCTGCATAT+CGG 0.467556 1_3:-29694322 None:intergenic
GAGTATATGATTGATTTAGT+AGG 0.468429 1_3:+29696905 Msa0113690:CDS
ACGATTTGAAGAGTTTCTAA+AGG 0.470175 1_3:+29701395 Msa0113690:CDS
AGAAGAAGAAGGAGAAGGAG+AGG 0.474237 1_3:-29693721 None:intergenic
CGATGGACACAAAGGCCAAC+GGG 0.476519 1_3:-29694727 None:intergenic
ACGACGCTTCTCACTGATTG+AGG 0.476805 1_3:-29701809 None:intergenic
ATTGTCCAAGAAATACAATT+GGG 0.479780 1_3:-29697053 None:intergenic
GAACTGTACTTCGTGCGGAT+TGG 0.481915 1_3:+29699227 Msa0113690:CDS
CTGATTGAGGAACCAACACC+TGG 0.483548 1_3:-29701796 None:intergenic
GCAAGTAGTTAAGTTAAAAG+AGG 0.484158 1_3:+29693417 Msa0113690:five_prime_UTR
AAATCTTGTTTGTAGTAGGA+TGG 0.484748 1_3:+29694512 Msa0113690:CDS
TCAGCTTTGGTGTAATCTTG+TGG 0.488001 1_3:+29706581 Msa0113690:CDS
AAATGCGATGTATTCAGCTT+TGG 0.489589 1_3:+29706568 Msa0113690:CDS
ATCATTTGAATCACTAATGT+CGG 0.491978 1_3:+29694350 Msa0113690:CDS
CATATATAACATTAAAAGGT+AGG 0.494981 1_3:-29709798 None:intergenic
GTTAGCAGTTCTCTCAAGGC+AGG 0.502796 1_3:-29694429 None:intergenic
ATTGATTTAGTAGGAAGGCC+CGG 0.503026 1_3:+29696914 Msa0113690:CDS
AGGAGGTACTGTTGATTGTA+GGG 0.505051 1_3:+29698674 Msa0113690:intron
GAAGGAGAAGGAGAGGAGGT+AGG 0.505965 1_3:-29693714 None:intergenic
ATAATGATCATATCTTACTT+CGG 0.508169 1_3:+29709883 Msa0113690:three_prime_UTR
TAGTGCAATTTGGTTCTGAC+AGG 0.508741 1_3:+29695124 Msa0113690:CDS
AGAGAATAAATACCCAAAAC+CGG 0.510221 1_3:-29693776 None:intergenic
TGAAGTTGACCTTGAGGAGG+AGG 0.511456 1_3:+29699014 Msa0113690:CDS
GTGTAGGTTGTTGCAGCTGT+TGG 0.515691 1_3:+29708299 Msa0113690:intron
ACTTATTCACACTTTAGCAT+TGG 0.516905 1_3:-29708758 None:intergenic
AGGAAAATTTAGGTGTGCGC+TGG 0.517585 1_3:+29694641 Msa0113690:CDS
TCTCAACATTGTCATTACAA+TGG 0.521398 1_3:+29709950 Msa0113690:three_prime_UTR
GCTGTTGGGAACAACCATAT+AGG 0.521887 1_3:+29698741 Msa0113690:CDS
CAAGTATTGTAGAAAGGACA+TGG 0.523570 1_3:+29695089 Msa0113690:CDS
AGAAGAAGGAGAAGGAGAGG+AGG 0.523827 1_3:-29693718 None:intergenic
TTCCAAATCCAAGAAGCGAT+TGG 0.525298 1_3:-29693691 None:intergenic
GACACATGTTCCTCGGTACC+AGG 0.525797 1_3:-29698949 None:intergenic
AACCGGTGTGAAAGTGATTG+AGG 0.529537 1_3:-29693759 None:intergenic
ACCGGTGTGAAAGTGATTGA+GGG 0.533854 1_3:-29693758 None:intergenic
TCTAAATCAGCCTGAATGGA+TGG 0.535865 1_3:+29706510 Msa0113690:intron
TATGAACTTCTGCAGATGCC+AGG 0.536200 1_3:+29701778 Msa0113690:CDS
TCAATTAAGGCAGCCACTTG+AGG 0.540560 1_3:-29708362 None:intergenic
CTTGTTTCTCCTCGTCACAA+TGG 0.540678 1_3:-29693378 None:intergenic
TATTTGCCTTTGTACGTGAA+AGG 0.542445 1_3:-29706370 None:intergenic
CTTTGGCCTTTCACGTACAA+AGG 0.546273 1_3:+29706364 Msa0113690:CDS
TTGAAGGAGAACATTGGGAC+AGG 0.546450 1_3:+29699066 Msa0113690:CDS
ATCTTGTTTGTAGTAGGATG+GGG 0.546717 1_3:+29694514 Msa0113690:CDS
TTCATAATGTAGGAGAAAGA+AGG 0.549377 1_3:-29708715 None:intergenic
GAGGCAGTTAAATCCTTCAC+AGG 0.551140 1_3:+29706630 Msa0113690:CDS
AATCTTGTTTGTAGTAGGAT+GGG 0.552756 1_3:+29694513 Msa0113690:CDS
CTTGGATGACATAATGGTGA+AGG 0.553501 1_3:-29696989 None:intergenic
ATTGAAAGACACATGTTCCT+CGG 0.553717 1_3:-29698956 None:intergenic
GAAGAGCTGAATTACTCTGC+TGG 0.556779 1_3:+29709757 Msa0113690:three_prime_UTR
CTTCACCATTATGTCATCCA+AGG 0.557932 1_3:+29696990 Msa0113690:CDS
CTTCTGCAGATGCCAGGTGT+TGG 0.558172 1_3:+29701784 Msa0113690:CDS
TAGTAACAGAATATTTATCA+AGG 0.558703 1_3:+29701648 Msa0113690:CDS
CCAATTGGAAGCTTACCCGT+TGG 0.559384 1_3:+29694712 Msa0113690:CDS
CCCAGTTAGCAGTTCTCTCA+AGG 0.560523 1_3:-29694433 None:intergenic
ATAAGGAAAATAACCTGTGA+AGG 0.562136 1_3:-29706643 None:intergenic
GGGATGCAAGTATTGTAGAA+AGG 0.563567 1_3:+29695083 Msa0113690:CDS
ACTTGAGGATTCACATGCCT+CGG 0.563742 1_3:-29708347 None:intergenic
TGTCCAGATCCTCCTCCTCA+AGG 0.564900 1_3:-29699023 None:intergenic
TTTGGTGCAAACTATGCTGT+TGG 0.567608 1_3:+29698726 Msa0113690:CDS
TTGATTTAGTAGGAAGGCCC+GGG 0.569889 1_3:+29696915 Msa0113690:CDS
CCCCTCAATCACTTTCACAC+CGG 0.572453 1_3:+29693757 Msa0113690:CDS
AAATTTAGGTGTGCGCTGGA+AGG 0.574722 1_3:+29694645 Msa0113690:CDS
GAAGATGAAGAAGACGAAGA+AGG 0.574808 1_3:+29693561 Msa0113690:CDS
CTGCCTCCATGGTTGTTGAA+GGG 0.577783 1_3:-29706614 None:intergenic
CCTACCGTGTCGAATCGCTA+AGG 0.577869 1_3:+29695062 Msa0113690:CDS
GAAGGATTTAACTGCCTCCA+TGG 0.578225 1_3:-29706625 None:intergenic
CTTTAAAGAGCAATGCTCGA+TGG 0.578607 1_3:-29694744 None:intergenic
CTACCGTGTCGAATCGCTAA+GGG 0.579256 1_3:+29695063 Msa0113690:CDS
TGTTGCTGTGAAGATACTTA+AGG 0.582434 1_3:+29701353 Msa0113690:CDS
ATTTGAAGAGTTTCTAAAGG+AGG 0.583073 1_3:+29701398 Msa0113690:CDS
TCAGGTTGGCATGTATCCCC+GGG 0.585442 1_3:-29696932 None:intergenic
AGGAGGATCTGGACATTCCG+TGG 0.586232 1_3:+29699031 Msa0113690:CDS
TTGGTGCAAACTATGCTGTT+GGG 0.590246 1_3:+29698727 Msa0113690:CDS
AGTAGTTAAAATATTACTGA+GGG 0.591033 1_3:-29709992 None:intergenic
TTTCTTACTGTAGGGAACCA+AGG 0.593666 1_3:+29708686 Msa0113690:intron
TCGTTTAGGTCCTGGTACCG+AGG 0.595673 1_3:+29698939 Msa0113690:intron
AGATAGGAAATGTACGGCGG+TGG 0.596519 1_3:+29693489 Msa0113690:exon
TGTTGATTGTAGGGACAAAG+TGG 0.601250 1_3:+29698683 Msa0113690:CDS
AGTACCGATATGCAGAATGT+TGG 0.601833 1_3:+29694318 Msa0113690:CDS
CATCCCTTAGCGATTCGACA+CGG 0.604936 1_3:-29695066 None:intergenic
ACGGGATGGATGCATATACA+TGG 0.610530 1_3:+29694289 Msa0113690:CDS
GTGAAGATACTTAAGGTGCA+AGG 0.610544 1_3:+29701360 Msa0113690:CDS
TGATAACTCGTCAGTTGTAG+TGG 0.611571 1_3:+29694383 Msa0113690:CDS
TGGTGACCCTTCAACAACCA+TGG 0.618144 1_3:+29706608 Msa0113690:CDS
GTACTTCGTGCGGATTGGCG+TGG 0.618791 1_3:+29699232 Msa0113690:CDS
TTGGATGACATAATGGTGAA+GGG 0.620571 1_3:-29696988 None:intergenic
ATTTGGAACTGTACTTCGTG+CGG 0.623599 1_3:+29699222 Msa0113690:CDS
TTCAAAATAAGTTCACTCCA+CGG 0.626128 1_3:-29699048 None:intergenic
ATATGATTGATTTAGTAGGA+AGG 0.628312 1_3:+29696909 Msa0113690:CDS
TTAGCAGTTCTCTCAAGGCA+GGG 0.628638 1_3:-29694428 None:intergenic
GAGCTGAGATAGGAAATGTA+CGG 0.628659 1_3:+29693483 Msa0113690:exon
TCGATGGACACAAAGGCCAA+CGG 0.633131 1_3:-29694728 None:intergenic
AATTCACTGAAGAATCAGGT+TGG 0.635393 1_3:-29696946 None:intergenic
CAAGAAGCGATTGGATTGAG+CGG 0.638658 1_3:-29693682 None:intergenic
AAGTAGTTAAAATATTACTG+AGG 0.643839 1_3:-29709993 None:intergenic
AGCTGAATATACAAAGACAA+TGG 0.652209 1_3:+29697030 Msa0113690:CDS
GAGGCATGTGAATCCTCAAG+TGG 0.653414 1_3:+29708349 Msa0113690:CDS
GCAATGCTCGATGGACACAA+AGG 0.654233 1_3:-29694735 None:intergenic
GAGTCATGAAGTTGACCTTG+AGG 0.654694 1_3:+29699008 Msa0113690:CDS
CCGGTGTGAAAGTGATTGAG+GGG 0.656051 1_3:-29693757 None:intergenic
TCATGAAGTTGACCTTGAGG+AGG 0.660990 1_3:+29699011 Msa0113690:CDS
ATGGCACCAGAAGTCATCAA+AGG 0.661499 1_3:+29706529 Msa0113690:CDS
GAGAAACAAGACCAAAATGG+TGG 0.675670 1_3:+29693391 Msa0113690:five_prime_UTR
CCTTAGCGATTCGACACGGT+AGG 0.676647 1_3:-29695062 None:intergenic
GCAAAAGGCTAGAAATTCCG+AGG 0.678048 1_3:+29708330 Msa0113690:CDS
GCAAAGGAAACAACCTGACG+TGG 0.679428 1_3:-29697101 None:intergenic
TTTAAGTATGGCATATGACG+TGG 0.682060 1_3:+29701831 Msa0113690:CDS
ACTGTAGGGAACCAAGGAGG+CGG 0.683282 1_3:+29708692 Msa0113690:intron
TGATTTAGTAGGAAGGCCCG+GGG 0.686428 1_3:+29696916 Msa0113690:CDS
AGTCAGAGACCATTGTGACG+AGG 0.702445 1_3:+29693369 None:intergenic
ACAACTGACGAGTTATCACA+CGG 0.704651 1_3:-29694378 None:intergenic
CTTACTGTAGGGAACCAAGG+AGG 0.707435 1_3:+29708689 Msa0113690:intron
AAGTATTGTAGAAAGGACAT+GGG 0.708862 1_3:+29695090 Msa0113690:CDS
CTTGAGAGAACTGCTAACTG+GGG 0.732889 1_3:+29694434 Msa0113690:CDS
CTGAGATAGGAAATGTACGG+CGG 0.744607 1_3:+29693486 Msa0113690:exon
TGACCCTTCAACAACCATGG+AGG 0.747642 1_3:+29706611 Msa0113690:CDS
TAGGGGAGGATCTTCCGACG+AGG 0.775756 1_3:+29694621 Msa0113690:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAATTTATTTAAAAA+AGG - chr1_3:29697138-29697157 None:intergenic 0.0%
!!! TTTTTAAATAAATTAATTAT+CGG + chr1_3:29697138-29697157 Msa0113690:intron 0.0%
!! TCTTATTAAAGATTATAATA+TGG - chr1_3:29696848-29696867 None:intergenic 10.0%
!! ATATTATAATCTTTAATAAG+AGG + chr1_3:29696847-29696866 Msa0113690:intron 10.0%
!!! ATAAATAAGTTTATTGATTT+TGG + chr1_3:29697600-29697619 Msa0113690:intron 10.0%
!! ATTTATTAAAGAAACAAATT+AGG - chr1_3:29698848-29698867 None:intergenic 10.0%
!!! ACTAAAATTGATAATTTTTA+TGG - chr1_3:29702284-29702303 None:intergenic 10.0%
!!! AAATTATCAATTTTAGTTAT+TGG + chr1_3:29702287-29702306 Msa0113690:intron 10.0%
!!! CATAATTTCTTTTAAAAAAA+AGG + chr1_3:29703288-29703307 Msa0113690:intron 10.0%
!!! GTTATTTTTTTTAATAAAAG+TGG - chr1_3:29704603-29704622 None:intergenic 10.0%
!! TATAGGTAAAATATAAATAA+TGG + chr1_3:29706980-29706999 Msa0113690:intron 10.0%
!!! AAATTTTTTATTAAGATGAA+AGG - chr1_3:29708075-29708094 None:intergenic 10.0%
!! ATATCATATATAACATTAAA+AGG - chr1_3:29709805-29709824 None:intergenic 10.0%
!! TATTAAAGATTATAATATGG+AGG - chr1_3:29696845-29696864 None:intergenic 15.0%
!! TAAGAAAAAATTACAACTTT+AGG + chr1_3:29697446-29697465 Msa0113690:intron 15.0%
!! TGAACATATGTTTATAAATT+GGG - chr1_3:29697991-29698010 None:intergenic 15.0%
!! TAAATATCAAAAGTTTAACA+TGG + chr1_3:29698602-29698621 Msa0113690:intron 15.0%
!! ATCTTTCAGTATATAAAATA+TGG - chr1_3:29699403-29699422 None:intergenic 15.0%
!!! TGATTATTTAGTTCATAATA+TGG + chr1_3:29699509-29699528 Msa0113690:intron 15.0%
!!! TTAACCAATTTTAACATATA+TGG + chr1_3:29699777-29699796 Msa0113690:intron 15.0%
!! TAATAATCAAATTTATCTTG+CGG + chr1_3:29700175-29700194 Msa0113690:intron 15.0%
!!! TTTTGGTTAAAAATGATTTT+AGG + chr1_3:29701702-29701721 Msa0113690:intron 15.0%
!! TTTACTTTCTATGAATATTT+GGG + chr1_3:29703026-29703045 Msa0113690:intron 15.0%
!! AATGTCAATTTCTTAAATTA+AGG + chr1_3:29704318-29704337 Msa0113690:intron 15.0%
!!! TGGATAAAAAATATTTGTTT+TGG - chr1_3:29704570-29704589 None:intergenic 15.0%
!! ATAAACAAATATCATAAAAC+TGG + chr1_3:29704640-29704659 Msa0113690:intron 15.0%
!! AAGGTGTATAATTAAAATTT+GGG + chr1_3:29705355-29705374 Msa0113690:intron 15.0%
!!! TCTAATACAATAATTTTAGT+GGG - chr1_3:29706183-29706202 None:intergenic 15.0%
!!! TTTATTTTTTGTATTAGTTC+AGG - chr1_3:29706217-29706236 None:intergenic 15.0%
!! TATGTAAAATAATTCTTTGA+TGG + chr1_3:29706479-29706498 Msa0113690:intron 15.0%
!!! AAAAAATTGACAATTGATTT+TGG + chr1_3:29706766-29706785 Msa0113690:intron 15.0%
!! AATTAGATAATGAATGATTA+AGG + chr1_3:29706953-29706972 Msa0113690:intron 15.0%
!! ATTAGATAATGAATGATTAA+GGG + chr1_3:29706954-29706973 Msa0113690:intron 15.0%
!!! AAATTTCTTTTTATACGAAA+AGG + chr1_3:29708089-29708108 Msa0113690:intron 15.0%
!! ATATTGAACAATATTATACT+TGG + chr1_3:29708802-29708821 Msa0113690:three_prime_UTR 15.0%
!!! TTACTTATTTTTGTTTAAAG+TGG + chr1_3:29708880-29708899 Msa0113690:intron 15.0%
!! CTATATTATACTATTTACTT+TGG + chr1_3:29709852-29709871 Msa0113690:three_prime_UTR 15.0%
!! TACATAACATAAGCATTTAT+AGG - chr1_3:29693904-29693923 None:intergenic 20.0%
!! CTAATTGAGATACTATTATT+TGG - chr1_3:29694005-29694024 None:intergenic 20.0%
!! TTTGAAAATTACTCATCAAA+AGG - chr1_3:29694050-29694069 None:intergenic 20.0%
!!! ATATTCAATTAAAAGGTACA+TGG - chr1_3:29694114-29694133 None:intergenic 20.0%
!! CGACTAAATATTCAATTAAA+AGG - chr1_3:29694121-29694140 None:intergenic 20.0%
!! TTAATTGAATATTTAGTCGA+TGG + chr1_3:29694122-29694141 Msa0113690:intron 20.0%
!!! TTTTTTGAAAAAATGAAGAG+AGG - chr1_3:29694548-29694567 None:intergenic 20.0%
!!! AAGCTTTTATTCTTTTCAAT+AGG + chr1_3:29694602-29694621 Msa0113690:intron 20.0%
!!! AGCTTTTATTCTTTTCAATA+GGG + chr1_3:29694603-29694622 Msa0113690:intron 20.0%
!! GAAATGAAGACAATAAAATA+CGG - chr1_3:29694911-29694930 None:intergenic 20.0%
!!! AACCAAATTGATGATTTTAT+TGG - chr1_3:29695427-29695446 None:intergenic 20.0%
!!! GGTTTTTAATGATTTGAAAT+AGG + chr1_3:29695512-29695531 Msa0113690:intron 20.0%
!! AAAAGATACTCTAATAATTG+TGG + chr1_3:29695664-29695683 Msa0113690:intron 20.0%
!! AAAGATACTCTAATAATTGT+GGG + chr1_3:29695665-29695684 Msa0113690:intron 20.0%
!!! GAACTTGTATTTTTTTAACT+AGG + chr1_3:29695710-29695729 Msa0113690:intron 20.0%
!!! AAATGGAATAGAAGATTTTT+AGG + chr1_3:29695865-29695884 Msa0113690:intron 20.0%
!! TATCATGTATAAATTGTGAA+GGG - chr1_3:29695976-29695995 None:intergenic 20.0%
!! TTATCATGTATAAATTGTGA+AGG - chr1_3:29695977-29695996 None:intergenic 20.0%
!!! TAAGATAATAAGAGTTTGTT+AGG - chr1_3:29696067-29696086 None:intergenic 20.0%
!!! TATTGATTGCCATTTTTAAA+TGG + chr1_3:29696217-29696236 Msa0113690:intron 20.0%
!!! ATTGATTGCCATTTTTAAAT+GGG + chr1_3:29696218-29696237 Msa0113690:intron 20.0%
!! TGTGTTTATGAATATTTATG+AGG + chr1_3:29696277-29696296 Msa0113690:intron 20.0%
!! GTGTTTATGAATATTTATGA+GGG + chr1_3:29696278-29696297 Msa0113690:intron 20.0%
!! TTTGCTTGTTTCAAATATTT+AGG + chr1_3:29696351-29696370 Msa0113690:intron 20.0%
!! AGTAAGAATATGATAGTATT+AGG + chr1_3:29696493-29696512 Msa0113690:intron 20.0%
!!! CAATTAGAGTATTAAGAAAA+GGG + chr1_3:29697164-29697183 Msa0113690:intron 20.0%
!!! GATAGTTATTTTCAGTATAA+AGG - chr1_3:29697207-29697226 None:intergenic 20.0%
!! AAAGTCAATATTTGAAAGTT+CGG - chr1_3:29697281-29697300 None:intergenic 20.0%
!! TATTGTCTTTGTAATATTAG+TGG + chr1_3:29697511-29697530 Msa0113690:intron 20.0%
!! ATTGTCTTTGTAATATTAGT+GGG + chr1_3:29697512-29697531 Msa0113690:intron 20.0%
!!! TTTATTGATTTTGGTTTTTC+TGG + chr1_3:29697609-29697628 Msa0113690:intron 20.0%
!!! AAAGTTTTCTTCTTTATTGA+AGG + chr1_3:29697784-29697803 Msa0113690:intron 20.0%
!! AACATATGTTTATAAATTGG+GGG - chr1_3:29697989-29698008 None:intergenic 20.0%
!! GAACATATGTTTATAAATTG+GGG - chr1_3:29697990-29698009 None:intergenic 20.0%
!! CTGAACATATGTTTATAAAT+TGG - chr1_3:29697992-29698011 None:intergenic 20.0%
!! CAATTTATAAACATATGTTC+AGG + chr1_3:29697990-29698009 Msa0113690:intron 20.0%
!! TTGTCTATTCTATCAATAAA+AGG + chr1_3:29698783-29698802 Msa0113690:intron 20.0%
!! AGTATATAAAATATGGAGAT+AGG - chr1_3:29699396-29699415 None:intergenic 20.0%
!! TCTATATATTTACTTCTCAA+GGG - chr1_3:29699681-29699700 None:intergenic 20.0%
!! CATACATATTTAACTCTTAA+GGG - chr1_3:29699752-29699771 None:intergenic 20.0%
!! TCATACATATTTAACTCTTA+AGG - chr1_3:29699753-29699772 None:intergenic 20.0%
!! ACATCCATATATGTTAAAAT+TGG - chr1_3:29699784-29699803 None:intergenic 20.0%
!! AATAATCAAATTTATCTTGC+GGG + chr1_3:29700176-29700195 Msa0113690:intron 20.0%
!! AAATCTATTCATAGATGAAT+GGG - chr1_3:29700211-29700230 None:intergenic 20.0%
!! AAAATCTATTCATAGATGAA+TGG - chr1_3:29700212-29700231 None:intergenic 20.0%
!!! ATTTATTCTTTCATCACTTT+TGG - chr1_3:29701217-29701236 None:intergenic 20.0%
!!! TATTTTTCTTTTTCAGATTG+AGG + chr1_3:29701460-29701479 Msa0113690:intron 20.0%
!!! TCTGTTACTATTGATAATTT+TGG - chr1_3:29701638-29701657 None:intergenic 20.0%
!! TAGTAACAGAATATTTATCA+AGG + chr1_3:29701648-29701667 Msa0113690:CDS 20.0%
!!! ATGTTTTATTCTTAACCAAA+TGG + chr1_3:29701729-29701748 Msa0113690:intron 20.0%
!! TGAAGAGAAATAATAGAATA+GGG - chr1_3:29702461-29702480 None:intergenic 20.0%
!! TTGAAGAGAAATAATAGAAT+AGG - chr1_3:29702460-29702479 None:intergenic 20.0%
!! TTGAAGAGAAATAATAGAAT+AGG + chr1_3:29702460-29702479 Msa0113690:intron 20.0%
!! TGAAGAGAAATAATAGAATA+GGG + chr1_3:29702461-29702480 Msa0113690:intron 20.0%
!! GAAATTAAAAAAGCTCATTT+AGG - chr1_3:29702501-29702520 None:intergenic 20.0%
!!! TCTAATTGGGTAATTTTAAT+CGG + chr1_3:29702704-29702723 Msa0113690:intron 20.0%
!! TAATTGAATTCATTGTAAAG+AGG + chr1_3:29702789-29702808 Msa0113690:intron 20.0%
!! AGAAAATCTGTCTTTATAAA+AGG + chr1_3:29702867-29702886 Msa0113690:intron 20.0%
!! GTTTACTTTCTATGAATATT+TGG + chr1_3:29703025-29703044 Msa0113690:intron 20.0%
!! TTAGGAAAGTCAAAATTAAT+AGG + chr1_3:29703210-29703229 Msa0113690:intron 20.0%
!! TAGGAAAGTCAAAATTAATA+GGG + chr1_3:29703211-29703230 Msa0113690:intron 20.0%
!!! AACTGTAATATTTTGATAGA+GGG + chr1_3:29703241-29703260 Msa0113690:intron 20.0%
!! ATACCATGTTGAAATTAATA+TGG + chr1_3:29704236-29704255 Msa0113690:intron 20.0%
!! TTCTTAAATTAAGGATTGAT+AGG + chr1_3:29704327-29704346 Msa0113690:intron 20.0%
!! ATAAAAACTGATCTCAATAA+GGG + chr1_3:29704381-29704400 Msa0113690:intron 20.0%
!!! AAAAAATATTTGTTTTGGTC+TGG - chr1_3:29704565-29704584 None:intergenic 20.0%
!!! ATAAAAGTGGTTTTATTCAT+TGG - chr1_3:29704590-29704609 None:intergenic 20.0%
!! CAAGGTGTATAATTAAAATT+TGG + chr1_3:29705354-29705373 Msa0113690:intron 20.0%
!! TATAATTAAAATTTGGGCTT+AGG + chr1_3:29705361-29705380 Msa0113690:intron 20.0%
!! ATAATTAAAATTTGGGCTTA+GGG + chr1_3:29705362-29705381 Msa0113690:intron 20.0%
!! TCAATACATGATAGTTAAAA+CGG + chr1_3:29705593-29705612 Msa0113690:intron 20.0%
!!! CTAATACAATAATTTTAGTG+GGG - chr1_3:29706182-29706201 None:intergenic 20.0%
!!! CTCTAATACAATAATTTTAG+TGG - chr1_3:29706184-29706203 None:intergenic 20.0%
!! CACTAAAATTATTGTATTAG+AGG + chr1_3:29706182-29706201 Msa0113690:intron 20.0%
!! TTTGTTTATAATATCAACTC+AGG + chr1_3:29706334-29706353 Msa0113690:intron 20.0%
!!! TATTTTACATACGAAAAAGT+TGG - chr1_3:29706470-29706489 None:intergenic 20.0%
!! AATGTGAGTTTAAAAACAAA+CGG - chr1_3:29706820-29706839 None:intergenic 20.0%
!! AGATGATAACTAATACTATT+TGG + chr1_3:29707270-29707289 Msa0113690:intron 20.0%
!! AAATATTACGAATAGAACAA+AGG - chr1_3:29708050-29708069 None:intergenic 20.0%
!!! TTTTGGTGAATTACAATATA+AGG - chr1_3:29708144-29708163 None:intergenic 20.0%
!! TCACCAAAATTAAAATTTGA+TGG + chr1_3:29708155-29708174 Msa0113690:intron 20.0%
!! TAATTATAATGTGGTTCAAT+AGG + chr1_3:29708612-29708631 Msa0113690:intron 20.0%
!! AACTTAGCTTATTTATCAAA+GGG + chr1_3:29709014-29709033 Msa0113690:intron 20.0%
!! AATTTCGTGTAAAAATATAC+TGG + chr1_3:29709662-29709681 Msa0113690:intron 20.0%
!! CATATATAACATTAAAAGGT+AGG - chr1_3:29709801-29709820 None:intergenic 20.0%
!! ATAATGATCATATCTTACTT+CGG + chr1_3:29709883-29709902 Msa0113690:three_prime_UTR 20.0%
!!! AATTGCATTTTCAAAAAGAA+TGG - chr1_3:29709927-29709946 None:intergenic 20.0%
!! AGTAGTTAAAATATTACTGA+GGG - chr1_3:29709995-29710014 None:intergenic 20.0%
!! AAGTAGTTAAAATATTACTG+AGG - chr1_3:29709996-29710015 None:intergenic 20.0%
! TTAAGTTAAAAGAGGAAAGT+TGG + chr1_3:29693425-29693444 Msa0113690:five_prime_UTR 25.0%
! TAAGTTAAAAGAGGAAAGTT+GGG + chr1_3:29693426-29693445 Msa0113690:five_prime_UTR 25.0%
!! AAACATTCTCGATTTACTTT+TGG + chr1_3:29693848-29693867 Msa0113690:intron 25.0%
! ACTATTATTTGGATAGGTTA+TGG - chr1_3:29693994-29694013 None:intergenic 25.0%
! TGAGATACTATTATTTGGAT+AGG - chr1_3:29694000-29694019 None:intergenic 25.0%
! CAAAGCTAATTTACATTATC+AGG - chr1_3:29694084-29694103 None:intergenic 25.0%
!! CTGATAATGTAAATTAGCTT+TGG + chr1_3:29694082-29694101 Msa0113690:intron 25.0%
! TTCATTAATATTTCCTGAAC+TGG + chr1_3:29694175-29694194 Msa0113690:intron 25.0%
! ATCATTTGAATCACTAATGT+CGG + chr1_3:29694350-29694369 Msa0113690:CDS 25.0%
!! TATTAAGTCTTTCAAGTAAC+TGG + chr1_3:29694457-29694476 Msa0113690:CDS 25.0%
!! GCTTTTATTCTTTTCAATAG+GGG + chr1_3:29694604-29694623 Msa0113690:intron 25.0%
! TTGTCTTCATTTCTTAATGA+TGG + chr1_3:29694918-29694937 Msa0113690:intron 25.0%
! CCTGCAATTAAAATTATCAT+AGG - chr1_3:29695023-29695042 None:intergenic 25.0%
!!! CCTATGATAATTTTAATTGC+AGG + chr1_3:29695020-29695039 Msa0113690:intron 25.0%
!!! ATTGATGATTTTATTGGTGT+GGG - chr1_3:29695421-29695440 None:intergenic 25.0%
!!! AATTGATGATTTTATTGGTG+TGG - chr1_3:29695422-29695441 None:intergenic 25.0%
! CACCAATAAAATCATCAATT+TGG + chr1_3:29695422-29695441 Msa0113690:intron 25.0%
!! ATTTGAAATAGGCATATGTT+AGG + chr1_3:29695523-29695542 Msa0113690:intron 25.0%
!! TTTGAAATAGGCATATGTTA+GGG + chr1_3:29695524-29695543 Msa0113690:intron 25.0%
! TATATGAAACGTTAGAGATA+TGG + chr1_3:29695794-29695813 Msa0113690:intron 25.0%
! CATAAGTAAAACAGAGTAAA+TGG + chr1_3:29695848-29695867 Msa0113690:intron 25.0%
! TTATATTCCATCCAATTACT+GGG - chr1_3:29695893-29695912 None:intergenic 25.0%
! TTTATATTCCATCCAATTAC+TGG - chr1_3:29695894-29695913 None:intergenic 25.0%
! ATCATGTATAAATTGTGAAG+GGG - chr1_3:29695975-29695994 None:intergenic 25.0%
! GCTAACTAGGAATATTAATT+AGG - chr1_3:29696001-29696020 None:intergenic 25.0%
!!! TTGATTGCCATTTTTAAATG+GGG + chr1_3:29696219-29696238 Msa0113690:intron 25.0%
! TTTCAAATATTTAGGAGAAC+TGG + chr1_3:29696359-29696378 Msa0113690:intron 25.0%
! TGAACAATTGAAAACATTGA+TGG - chr1_3:29696403-29696422 None:intergenic 25.0%
! GAATTTACATTGATGTACTT+TGG + chr1_3:29696515-29696534 Msa0113690:intron 25.0%
! TAAAAATCTCAACTGAGTTA+GGG + chr1_3:29696540-29696559 Msa0113690:intron 25.0%
!!! TGCTGTTTTATGTTTATTTC+TGG - chr1_3:29696772-29696791 None:intergenic 25.0%
!! GAGTATATGATTGATTTAGT+AGG + chr1_3:29696905-29696924 Msa0113690:CDS 25.0%
!! ATATGATTGATTTAGTAGGA+AGG + chr1_3:29696909-29696928 Msa0113690:CDS 25.0%
! ATTGTCCAAGAAATACAATT+GGG - chr1_3:29697056-29697075 None:intergenic 25.0%
!! GCAATTAGAGTATTAAGAAA+AGG + chr1_3:29697163-29697182 Msa0113690:intron 25.0%
! CAGTATAAAGGCAAATAAAA+AGG - chr1_3:29697195-29697214 None:intergenic 25.0%
!! TGACTTTTGTAGTAAATCTT+TGG + chr1_3:29697294-29697313 Msa0113690:intron 25.0%
! CAAAAAAAGCTCTTATGATT+AGG - chr1_3:29697416-29697435 None:intergenic 25.0%
!!! CTAATCATAAGAGCTTTTTT+TGG + chr1_3:29697414-29697433 Msa0113690:intron 25.0%
! CAAAGACAATATCTTAAATG+AGG - chr1_3:29697502-29697521 None:intergenic 25.0%
! TAACATTATAATACTACCGT+TGG - chr1_3:29697644-29697663 None:intergenic 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_3:29697837-29697856 Msa0113690:intron 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_3:29697837-29697856 Msa0113690:intron 25.0%
! TACGAACATATGTTTATAAG+TGG - chr1_3:29698208-29698227 None:intergenic 25.0%
! CGACAAATATAAAATAACAC+AGG - chr1_3:29698471-29698490 None:intergenic 25.0%
!! AAACTTAGAGGTATATAACT+GGG - chr1_3:29698636-29698655 None:intergenic 25.0%
! ATGAAAATTAGCAAACTTAG+AGG - chr1_3:29698648-29698667 None:intergenic 25.0%
!! TTCTATGTTTTCTGTCTTAA+TGG + chr1_3:29698886-29698905 Msa0113690:intron 25.0%
!!! TTATTTTGAAGGAGAACATT+GGG + chr1_3:29699061-29699080 Msa0113690:CDS 25.0%
! CTCTATATATATCTTGTACA+AGG - chr1_3:29699106-29699125 None:intergenic 25.0%
! ATTCATTTGTCCTCATTATA+AGG + chr1_3:29699289-29699308 Msa0113690:intron 25.0%
! ATGTTGATATCCTTATAATG+AGG - chr1_3:29699302-29699321 None:intergenic 25.0%
!! TCCTTTTTATAAGAGACAAA+TGG + chr1_3:29699474-29699493 Msa0113690:intron 25.0%
!! CCTTTTTATAAGAGACAAAT+GGG + chr1_3:29699475-29699494 Msa0113690:intron 25.0%
!!! TCAACAAAAGTTGATGTATT+TGG - chr1_3:29699536-29699555 None:intergenic 25.0%
!! TCCTTTTTATAAGAGACAAT+GGG - chr1_3:29699559-29699578 None:intergenic 25.0%
! CTCTATATATTTACTTCTCA+AGG - chr1_3:29699682-29699701 None:intergenic 25.0%
! AATACTTTGACAGTAAATTG+TGG - chr1_3:29699832-29699851 None:intergenic 25.0%
! ATTGCTTCATAGTTTCTAAT+AGG + chr1_3:29699892-29699911 Msa0113690:intron 25.0%
! TTGCTTCATAGTTTCTAATA+GGG + chr1_3:29699893-29699912 Msa0113690:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + chr1_3:29700024-29700043 Msa0113690:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + chr1_3:29700025-29700044 Msa0113690:intron 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG + chr1_3:29700026-29700045 Msa0113690:intron 25.0%
!!! GTGTATATTTTAACCTATGA+GGG + chr1_3:29700128-29700147 Msa0113690:intron 25.0%
!!! TGTATATTTTAACCTATGAG+GGG + chr1_3:29700129-29700148 Msa0113690:intron 25.0%
! ATAATCAAATTTATCTTGCG+GGG + chr1_3:29700177-29700196 Msa0113690:intron 25.0%
! AATCTATTCATAGATGAATG+GGG - chr1_3:29700210-29700229 None:intergenic 25.0%
! ACATGCGATAAAAAAAATCT+AGG + chr1_3:29700564-29700583 Msa0113690:intron 25.0%
! CAATTCCATTTATTAACTCT+AGG + chr1_3:29701004-29701023 Msa0113690:intron 25.0%
!!! CTCACTATTTTAAACAAAAG+AGG + chr1_3:29701073-29701092 Msa0113690:intron 25.0%
! AGGAATATTAATTGTCACAA+TGG - chr1_3:29701242-29701261 None:intergenic 25.0%
! TATAATATAAAACCATTCCC+TGG - chr1_3:29701486-29701505 None:intergenic 25.0%
!!! GTTACTATTGATAATTTTGG+TGG - chr1_3:29701635-29701654 None:intergenic 25.0%
! TTCAAATCTCTATGAACAAT+GGG - chr1_3:29702001-29702020 None:intergenic 25.0%
! TATCTTTACGTGAGAATAAA+AGG + chr1_3:29702093-29702112 Msa0113690:intron 25.0%
! AGAATAAAAGGAATAGTTAC+TGG + chr1_3:29702105-29702124 Msa0113690:intron 25.0%
!! ATTTTTATGGATTCTCCAAT+CGG - chr1_3:29702271-29702290 None:intergenic 25.0%
!! AACTTTCAAGTCTGTTATTA+TGG + chr1_3:29702337-29702356 Msa0113690:intron 25.0%
!! ACTTTCAAGTCTGTTATTAT+GGG + chr1_3:29702338-29702357 Msa0113690:intron 25.0%
! TTAGTTATCAGAGAGTTAAA+TGG + chr1_3:29702390-29702409 Msa0113690:intron 25.0%
! TAGTTATCAGAGAGTTAAAT+GGG + chr1_3:29702391-29702410 Msa0113690:intron 25.0%
! AAGAAGATGAAAAGATCAAT+AGG + chr1_3:29702437-29702456 Msa0113690:intron 25.0%
!!! ACCATCTATTTTTGATCTAA+TGG + chr1_3:29702522-29702541 Msa0113690:intron 25.0%
! ACCATTAGATCAAAAATAGA+TGG - chr1_3:29702526-29702545 None:intergenic 25.0%
!! TTCTAATTAGTCTCTTTATG+AGG - chr1_3:29702602-29702621 None:intergenic 25.0%
!!! TCTAATTGGGTGATTTTAAT+TGG - chr1_3:29702660-29702679 None:intergenic 25.0%
! AGTTAATGATGTGTCTAATT+GGG - chr1_3:29702673-29702692 None:intergenic 25.0%
! TAGTTAATGATGTGTCTAAT+TGG - chr1_3:29702674-29702693 None:intergenic 25.0%
! TGTCTTTATAAAAGGAAACA+AGG + chr1_3:29702875-29702894 Msa0113690:intron 25.0%
! GTCTTTATAAAAGGAAACAA+GGG + chr1_3:29702876-29702895 Msa0113690:intron 25.0%
! TCTTTATAAAAGGAAACAAG+GGG + chr1_3:29702877-29702896 Msa0113690:intron 25.0%
!!! GAACTGTAATATTTTGATAG+AGG + chr1_3:29703240-29703259 Msa0113690:intron 25.0%
! ATGTGTAATTCTCCTATTTA+AGG - chr1_3:29703271-29703290 None:intergenic 25.0%
! TTAACAAAGAACTAGATAAG+GGG - chr1_3:29703421-29703440 None:intergenic 25.0%
! CTTAACAAAGAACTAGATAA+GGG - chr1_3:29703422-29703441 None:intergenic 25.0%
! TCTTAACAAAGAACTAGATA+AGG - chr1_3:29703423-29703442 None:intergenic 25.0%
! TGTTTGGTTAATTAATTCGA+TGG - chr1_3:29703723-29703742 None:intergenic 25.0%
! AGAGTTAGAAAAAAACATCA+TGG + chr1_3:29703913-29703932 Msa0113690:intron 25.0%
! TAGCCATATTAATTTCAACA+TGG - chr1_3:29704242-29704261 None:intergenic 25.0%
! ATGTGTAATTCTCCTATTTA+AGG - chr1_3:29703271-29703290 None:intergenic 25.0%
! CATAAAAACTGATCTCAATA+AGG + chr1_3:29704380-29704399 Msa0113690:intron 25.0%
! ACCATTTCAACAAATTAGTT+CGG - chr1_3:29704442-29704461 None:intergenic 25.0%
!!! ACTAATTTGTTGAAATGGTT+CGG + chr1_3:29704443-29704462 Msa0113690:intron 25.0%
!!! ACAGTAAATAGTTGTTTTCA+TGG - chr1_3:29704804-29704823 None:intergenic 25.0%
! TCCAGTACAATTCATTAAAA+AGG + chr1_3:29704825-29704844 Msa0113690:intron 25.0%
!! ACCTTTTTAATGAATTGTAC+TGG - chr1_3:29704829-29704848 None:intergenic 25.0%
! ACTCACAAAATCAATTTGTA+AGG + chr1_3:29705389-29705408 Msa0113690:intron 25.0%
! ATCTTCAATGTAGACTATTA+CGG + chr1_3:29705504-29705523 Msa0113690:intron 25.0%
!! AAGTCTTGTAAAAACTACTT+TGG - chr1_3:29705748-29705767 None:intergenic 25.0%
!!! TTACTTACATGTTTTCAAGA+AGG + chr1_3:29706105-29706124 Msa0113690:intron 25.0%
! CTTTAGCAAGTTTAGTATTT+GGG - chr1_3:29706150-29706169 None:intergenic 25.0%
! GTACAAGGAATAATTATTCT+AGG - chr1_3:29706253-29706272 None:intergenic 25.0%
! ATATATGGATCTACAGATTA+TGG + chr1_3:29706296-29706315 Msa0113690:intron 25.0%
!! GTTTTTAAACTCACATTTGA+AGG + chr1_3:29706823-29706842 Msa0113690:intron 25.0%
! CTCAATGCAACATTAATTAT+TGG + chr1_3:29706881-29706900 Msa0113690:intron 25.0%
! TCTCAGTAATAAATAGCTAA+GGG - chr1_3:29706920-29706939 None:intergenic 25.0%
! TGAATGATTAAGGGTAATAT+AGG + chr1_3:29706963-29706982 Msa0113690:intron 25.0%
! TCTAACAATGTGTTTATATG+TGG + chr1_3:29707048-29707067 Msa0113690:intron 25.0%
! CTAACAATGTGTTTATATGT+GGG + chr1_3:29707049-29707068 Msa0113690:intron 25.0%
! TAACAATGTGTTTATATGTG+GGG + chr1_3:29707050-29707069 Msa0113690:intron 25.0%
! TGATACCATCTTATAAATTG+TGG - chr1_3:29707124-29707143 None:intergenic 25.0%
!!! AACTAGCTTTTTGTTTTTCA+TGG - chr1_3:29707467-29707486 None:intergenic 25.0%
! ACGCTACTTATATAATTGAA+GGG - chr1_3:29707956-29707975 None:intergenic 25.0%
! AACGCTACTTATATAATTGA+AGG - chr1_3:29707957-29707976 None:intergenic 25.0%
! AAAGCAAAAAGAAAAATCAG+TGG - chr1_3:29707983-29708002 None:intergenic 25.0%
!!! ATGTTTTGTAATTTCTGAAG+AGG + chr1_3:29708015-29708034 Msa0113690:intron 25.0%
!!! TGGCCATCAAATTTTAATTT+TGG - chr1_3:29708161-29708180 None:intergenic 25.0%
!! AAATTAAAATTTGATGGCCA+AGG + chr1_3:29708161-29708180 Msa0113690:intron 25.0%
! TATTTGGATGTCAAATCAAA+AGG - chr1_3:29708273-29708292 None:intergenic 25.0%
!!! AATAGATGAAGTTTTAAGCT+TGG + chr1_3:29708440-29708459 Msa0113690:intron 25.0%
! TGAACCACATTATAATTAGT+TGG - chr1_3:29708610-29708629 None:intergenic 25.0%
! CAATGTATTACAAAAAATGC+AGG - chr1_3:29708640-29708659 None:intergenic 25.0%
!! TTTTGTAATACATTGCCATA+TGG + chr1_3:29708645-29708664 Msa0113690:intron 25.0%
! AAACAATAGTTTCTTACTGT+AGG + chr1_3:29708677-29708696 Msa0113690:intron 25.0%
! AACAATAGTTTCTTACTGTA+GGG + chr1_3:29708678-29708697 Msa0113690:intron 25.0%
!!! TTCAGAAATGGTTCTAAATT+TGG - chr1_3:29708919-29708938 None:intergenic 25.0%
! TTGATAAATAAGCTAAGTTC+AGG - chr1_3:29709013-29709032 None:intergenic 25.0%
! GAACTTAGCTTATTTATCAA+AGG + chr1_3:29709013-29709032 Msa0113690:intron 25.0%
! GAATTTCGTAAATGTCTAAT+TGG - chr1_3:29709118-29709137 None:intergenic 25.0%
! AATAATCACTGAAAAACACA+AGG + chr1_3:29709423-29709442 Msa0113690:intron 25.0%
! ATAATCACTGAAAAACACAA+GGG + chr1_3:29709424-29709443 Msa0113690:intron 25.0%
! TAGAAAAATTGTCTATTGCT+TGG - chr1_3:29709540-29709559 None:intergenic 25.0%
! GTACTTTAGTATAGCAATTA+GGG - chr1_3:29709615-29709634 None:intergenic 25.0%
! AGTACTTTAGTATAGCAATT+AGG - chr1_3:29709616-29709635 None:intergenic 25.0%
!! ACGAAATTTTAAGCAAAACA+GGG - chr1_3:29709650-29709669 None:intergenic 25.0%
!!! TATTGCTGATTGTTTCTATT+TGG + chr1_3:29709718-29709737 Msa0113690:intron 25.0%
! TAATGATCATATCTTACTTC+GGG + chr1_3:29709884-29709903 Msa0113690:three_prime_UTR 25.0%
GCAAGTAGTTAAGTTAAAAG+AGG + chr1_3:29693417-29693436 Msa0113690:five_prime_UTR 30.0%
AGAGAATAAATACCCAAAAC+CGG - chr1_3:29693779-29693798 None:intergenic 30.0%
! ATTACTCATCAAAAGGTACA+TGG - chr1_3:29694043-29694062 None:intergenic 30.0%
!! GATGGATTTTACCTAATTCA+CGG + chr1_3:29694270-29694289 Msa0113690:CDS 30.0%
! ATGGATTTTACCTAATTCAC+GGG + chr1_3:29694271-29694290 Msa0113690:CDS 30.0%
GACATTAGTGATTCAAATGA+TGG - chr1_3:29694351-29694370 None:intergenic 30.0%
! TTGCAAATCTTGTTTGTAGT+AGG + chr1_3:29694508-29694527 Msa0113690:CDS 30.0%
! AAATCTTGTTTGTAGTAGGA+TGG + chr1_3:29694512-29694531 Msa0113690:CDS 30.0%
! AATCTTGTTTGTAGTAGGAT+GGG + chr1_3:29694513-29694532 Msa0113690:CDS 30.0%
! TTTATTCTTTTCAATAGGGG+AGG + chr1_3:29694607-29694626 Msa0113690:intron 30.0%
ATGGGTCAAAAATAACGAAT+CGG - chr1_3:29694783-29694802 None:intergenic 30.0%
!!! GTTATTTTTGACCCATTTTC+TGG + chr1_3:29694787-29694806 Msa0113690:intron 30.0%
AAATGTTCTGACCAGAAAAT+GGG - chr1_3:29694801-29694820 None:intergenic 30.0%
AAAATGTTCTGACCAGAAAA+TGG - chr1_3:29694802-29694821 None:intergenic 30.0%
ATACGGAACTAGAAGATAAA+TGG - chr1_3:29694894-29694913 None:intergenic 30.0%
!!! ATTTTAATTGCAGGTGTTAG+CGG + chr1_3:29695029-29695048 Msa0113690:intron 30.0%
! AAGTATTGTAGAAAGGACAT+GGG + chr1_3:29695090-29695109 Msa0113690:CDS 30.0%
ATAAAACTGCCACATTATAC+CGG + chr1_3:29695327-29695346 Msa0113690:intron 30.0%
CTTCAAATATATGTATGACG+AGG + chr1_3:29695602-29695621 Msa0113690:intron 30.0%
! ACTCTGTTTTACTTATGCTT+AGG - chr1_3:29695845-29695864 None:intergenic 30.0%
!! ATTTTTAGGAACCCAGTAAT+TGG + chr1_3:29695879-29695898 Msa0113690:intron 30.0%
TTGTGAGTTAGTAACAATAC+AGG - chr1_3:29696034-29696053 None:intergenic 30.0%
ATCTTATATCCCAACAAAGA+TGG + chr1_3:29696081-29696100 Msa0113690:intron 30.0%
CCAAAACTATTACAAGACTA+TGG - chr1_3:29696180-29696199 None:intergenic 30.0%
!!! CCATAGTCTTGTAATAGTTT+TGG + chr1_3:29696177-29696196 Msa0113690:intron 30.0%
!!! CTTGTAATAGTTTTGGCTAA+AGG + chr1_3:29696184-29696203 Msa0113690:intron 30.0%
TGCTATTCCCCATTTAAAAA+TGG - chr1_3:29696229-29696248 None:intergenic 30.0%
GTAAAAATCTCAACTGAGTT+AGG + chr1_3:29696539-29696558 Msa0113690:intron 30.0%
AAAAATCTCAACTGAGTTAG+GGG + chr1_3:29696541-29696560 Msa0113690:intron 30.0%
! TGAAATTAGAGTCGTTGATT+GGG - chr1_3:29696681-29696700 None:intergenic 30.0%
AAGATTATAATATGGAGGAG+AGG - chr1_3:29696840-29696859 None:intergenic 30.0%
TAAATCAATCATATACTCCC+TGG - chr1_3:29696903-29696922 None:intergenic 30.0%
AGCTGAATATACAAAGACAA+TGG + chr1_3:29697030-29697049 Msa0113690:CDS 30.0%
GATTGTCCAAGAAATACAAT+TGG - chr1_3:29697057-29697076 None:intergenic 30.0%
!! TTTAAAAAAGGCATCCAGAA+GGG - chr1_3:29697126-29697145 None:intergenic 30.0%
!! ATTTAAAAAAGGCATCCAGA+AGG - chr1_3:29697127-29697146 None:intergenic 30.0%
ATCTATAACTATAAAAGCCC+AGG - chr1_3:29697258-29697277 None:intergenic 30.0%
AGTTACCATGTACACAAAAA+CGG + chr1_3:29697336-29697355 Msa0113690:intron 30.0%
!! ACTGTGTTATTTACAACTTC+TGG + chr1_3:29697389-29697408 Msa0113690:intron 30.0%
!! ATTTTCCATGAAGGTATGTT+TGG + chr1_3:29697553-29697572 Msa0113690:intron 30.0%
! TTTTTCCAAACATACCTTCA+TGG - chr1_3:29697561-29697580 None:intergenic 30.0%
!!! ATTTTGGTTTTTCTGGTAAC+TGG + chr1_3:29697616-29697635 Msa0113690:intron 30.0%
!!! TTTTGGTTTTTCTGGTAACT+GGG + chr1_3:29697617-29697636 Msa0113690:intron 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_3:29697836-29697855 Msa0113690:intron 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_3:29697836-29697855 Msa0113690:intron 30.0%
!! CCAAAATTCTAAGATGGTAT+CGG - chr1_3:29698142-29698161 None:intergenic 30.0%
! CGATACCATCTTAGAATTTT+GGG + chr1_3:29698140-29698159 Msa0113690:intron 30.0%
TACCTTATCTCATCAAATGT+GGG + chr1_3:29698246-29698265 Msa0113690:intron 30.0%
!! TCAACAATTCCTTTTGTTGT+GGG + chr1_3:29698273-29698292 Msa0113690:intron 30.0%
!! GAAATTTCCTAGTAGTTTTG+TGG + chr1_3:29698308-29698327 Msa0113690:intron 30.0%
CACAATGCAAGGAAAAATTA+CGG - chr1_3:29698355-29698374 None:intergenic 30.0%
AACAATATCAATATCACGCA+AGG - chr1_3:29698516-29698535 None:intergenic 30.0%
! AACTTAGAGGTATATAACTG+GGG - chr1_3:29698635-29698654 None:intergenic 30.0%
! CAAACTTAGAGGTATATAAC+TGG - chr1_3:29698637-29698656 None:intergenic 30.0%
! TTGCTAATTTTCATCATGAC+AGG + chr1_3:29698654-29698673 Msa0113690:intron 30.0%
TAGGCATATTAAGTATCAGA+AGG - chr1_3:29698829-29698848 None:intergenic 30.0%
TCGAATAATTCACTACTGAT+TGG - chr1_3:29698990-29699009 None:intergenic 30.0%
TTCAAAATAAGTTCACTCCA+CGG - chr1_3:29699051-29699070 None:intergenic 30.0%
!!! CTTATTTTGAAGGAGAACAT+TGG + chr1_3:29699060-29699079 Msa0113690:CDS 30.0%
TGAAAGATAAAACACGTCAT+AGG + chr1_3:29699415-29699434 Msa0113690:intron 30.0%
CTCTTATAAAAAGGACAAGA+GGG - chr1_3:29699469-29699488 None:intergenic 30.0%
TCTCTTATAAAAAGGACAAG+AGG - chr1_3:29699470-29699489 None:intergenic 30.0%
CCCATTTGTCTCTTATAAAA+AGG - chr1_3:29699478-29699497 None:intergenic 30.0%
ACCCATTGTCTCTTATAAAA+AGG + chr1_3:29699555-29699574 Msa0113690:intron 30.0%
! GTCCTTTTTATAAGAGACAA+TGG - chr1_3:29699473-29699492 None:intergenic 30.0%
ATATATTTACTTCTCAAGGG+AGG - chr1_3:29699678-29699697 None:intergenic 30.0%
AATTGACCAAGTGTTTATCA+AGG + chr1_3:29699995-29700014 Msa0113690:intron 30.0%
ATGTGATTCAATCATCTTTC+AGG + chr1_3:29700055-29700074 Msa0113690:intron 30.0%
TGTGATTCAATCATCTTTCA+GGG + chr1_3:29700056-29700075 Msa0113690:intron 30.0%
TCTAGTATACTTTGCATAAG+AGG + chr1_3:29700097-29700116 Msa0113690:intron 30.0%
CTAGTATACTTTGCATAAGA+GGG + chr1_3:29700098-29700117 Msa0113690:intron 30.0%
TAGTATACTTTGCATAAGAG+GGG + chr1_3:29700099-29700118 Msa0113690:intron 30.0%
!!! CGTGTATATTTTAACCTATG+AGG + chr1_3:29700127-29700146 Msa0113690:intron 30.0%
ATCTATTCATAGATGAATGG+GGG - chr1_3:29700209-29700228 None:intergenic 30.0%
GTTTGAATTGGTGTATACAA+TGG - chr1_3:29700235-29700254 None:intergenic 30.0%
AGTCTAAATATACCAAGCAA+TGG - chr1_3:29700268-29700287 None:intergenic 30.0%
!!! GTTAACTGTTTTAATCTCCT+AGG - chr1_3:29700382-29700401 None:intergenic 30.0%
AATATCCTAAGAAAGTTCAC+TGG + chr1_3:29700488-29700507 Msa0113690:intron 30.0%
TGCGATAAAAAAAATCTAGG+AGG + chr1_3:29700567-29700586 Msa0113690:intron 30.0%
ATGGAAAGAGGATAAAGTAA+GGG + chr1_3:29700610-29700629 Msa0113690:intron 30.0%
ACCATCTATATAGCAAAAGA+AGG + chr1_3:29700638-29700657 Msa0113690:intron 30.0%
!! ACCTTCTTTTGCTATATAGA+TGG - chr1_3:29700642-29700661 None:intergenic 30.0%
!!! CAATTTTTTAACACTGCTGT+TGG + chr1_3:29700669-29700688 Msa0113690:intron 30.0%
CATCACTTCTCAACAAAATA+TGG - chr1_3:29700787-29700806 None:intergenic 30.0%
TTCCATTTATTAACTCTAGG+TGG + chr1_3:29701007-29701026 Msa0113690:intron 30.0%
ATCCACCTAGAGTTAATAAA+TGG - chr1_3:29701012-29701031 None:intergenic 30.0%
! CTTGAAGTTGTATCCTATTT+TGG - chr1_3:29701102-29701121 None:intergenic 30.0%
CAAAATAGGATACAACTTCA+AGG + chr1_3:29701100-29701119 Msa0113690:intron 30.0%
! GATACAACTTCAAGGTATTT+GGG + chr1_3:29701108-29701127 Msa0113690:intron 30.0%
CAGCACAAAAACATCTAAAA+AGG - chr1_3:29701262-29701281 None:intergenic 30.0%
CACAGTTAGTATTTGGTTAT+CGG - chr1_3:29701320-29701339 None:intergenic 30.0%
TAGAAACTCTTCAAATCGTT+CGG - chr1_3:29701394-29701413 None:intergenic 30.0%
ACGATTTGAAGAGTTTCTAA+AGG + chr1_3:29701395-29701414 Msa0113690:CDS 30.0%
! ATTTGAAGAGTTTCTAAAGG+AGG + chr1_3:29701398-29701417 Msa0113690:CDS 30.0%
AGTATCCCAGTTTATTTCAT+AGG + chr1_3:29701547-29701566 Msa0113690:intron 30.0%
TGTGACCTATGAAATAAACT+GGG - chr1_3:29701555-29701574 None:intergenic 30.0%
TCCAAACATTGTACTTCTAA+TGG + chr1_3:29701595-29701614 Msa0113690:CDS 30.0%
CCAAACATTGTACTTCTAAT+GGG + chr1_3:29701596-29701615 Msa0113690:CDS 30.0%
!! CTATTGATAATTTTGGTGGT+TGG - chr1_3:29701631-29701650 None:intergenic 30.0%
AAAAAAGTGATGATTGTGTC+AGG - chr1_3:29701685-29701704 None:intergenic 30.0%
!!! GACACAATCATCACTTTTTT+TGG + chr1_3:29701685-29701704 Msa0113690:intron 30.0%
CTTCAAATCTCTATGAACAA+TGG - chr1_3:29702002-29702021 None:intergenic 30.0%
!! TTTGAAGTCTCCAAATCTTT+TGG + chr1_3:29702015-29702034 Msa0113690:intron 30.0%
GAATCATCAACCAAAAGATT+TGG - chr1_3:29702028-29702047 None:intergenic 30.0%
TGATGATTCATACACTGTTA+AGG + chr1_3:29702039-29702058 Msa0113690:intron 30.0%
GCCATTAGATCAAAAGTAAA+CGG + chr1_3:29702127-29702146 Msa0113690:intron 30.0%
!! ACCGTTTACTTTTGATCTAA+TGG - chr1_3:29702131-29702150 None:intergenic 30.0%
AATCGGCAATTCAATTTCAA+AGG - chr1_3:29702254-29702273 None:intergenic 30.0%
! TTTGAAATTGAATTGCCGAT+TGG + chr1_3:29702253-29702272 Msa0113690:intron 30.0%
TATCTTTACGTGAGAATGAA+AGG - chr1_3:29702560-29702579 None:intergenic 30.0%
GACTAATTAGAATAGACTGA+TGG + chr1_3:29702610-29702629 Msa0113690:intron 30.0%
ACTAAGATGATGTGTCTAAT+TGG + chr1_3:29702690-29702709 Msa0113690:intron 30.0%
CTAAGATGATGTGTCTAATT+GGG + chr1_3:29702691-29702710 Msa0113690:intron 30.0%
! ATAAAGACAGATTTTCTTCC+AGG - chr1_3:29702864-29702883 None:intergenic 30.0%
CACAATCTTAAAACCATGTA+TGG - chr1_3:29703120-29703139 None:intergenic 30.0%
!!! CATACATGGTTTTAAGATTG+TGG + chr1_3:29703118-29703137 Msa0113690:intron 30.0%
TAAATCTTCTCAACGAGATA+GGG - chr1_3:29703193-29703212 None:intergenic 30.0%
TGTTCAGTTTATTTAGATGC+AGG - chr1_3:29703477-29703496 None:intergenic 30.0%
GGTCAACAATTCATTGTAAT+TGG + chr1_3:29703547-29703566 Msa0113690:intron 30.0%
AGATTATGCAACAGTAAAGA+GGG - chr1_3:29703589-29703608 None:intergenic 30.0%
AAGATTATGCAACAGTAAAG+AGG - chr1_3:29703590-29703609 None:intergenic 30.0%
CTGAAAACTCAATCATTGTT+TGG - chr1_3:29703739-29703758 None:intergenic 30.0%
ATGGAAAAAACTTCATGGAA+TGG - chr1_3:29703868-29703887 None:intergenic 30.0%
ACTCAATGGAAAAAACTTCA+TGG - chr1_3:29703873-29703892 None:intergenic 30.0%
! AAATATTCATTCTAGGAGGA+TGG - chr1_3:29703969-29703988 None:intergenic 30.0%
ATAGGATCACAAAATAGAGA+GGG + chr1_3:29704345-29704364 Msa0113690:intron 30.0%
!! ACCGAACTAATTTGTTGAAA+TGG + chr1_3:29704438-29704457 Msa0113690:intron 30.0%
GGTTACTTCCAAACTTTAAA+CGG - chr1_3:29704484-29704503 None:intergenic 30.0%
ACCAAACTGAACCAAATTTA+TGG + chr1_3:29704501-29704520 Msa0113690:intron 30.0%
! ACCATAAATTTGGTTCAGTT+TGG - chr1_3:29704505-29704524 None:intergenic 30.0%
ACTGAACCAAATTTATGGTT+TGG + chr1_3:29704506-29704525 Msa0113690:intron 30.0%
GGTTAACCAAACCATAAATT+TGG - chr1_3:29704515-29704534 None:intergenic 30.0%
!!! ATATTTGTTTTGGTCTGGTT+CGG - chr1_3:29704560-29704579 None:intergenic 30.0%
!! AAGGTATCGTCATTTATCAA+AGG - chr1_3:29704735-29704754 None:intergenic 30.0%
ATGTTAGAATTGAAGGATCT+TGG - chr1_3:29704922-29704941 None:intergenic 30.0%
AGTAGCAATGTTAGAATTGA+AGG - chr1_3:29704929-29704948 None:intergenic 30.0%
ATGCTATCAATATGTACATG+TGG + chr1_3:29704992-29705011 Msa0113690:intron 30.0%
! AAGTAATGTTTGCTGCATAA+GGG - chr1_3:29705299-29705318 None:intergenic 30.0%
! AAAGTAATGTTTGCTGCATA+AGG - chr1_3:29705300-29705319 None:intergenic 30.0%
CAAAATCAATTTGTAAGGTG+TGG + chr1_3:29705394-29705413 Msa0113690:intron 30.0%
AACTAGAGATATGACTAAGA+CGG - chr1_3:29705441-29705460 None:intergenic 30.0%
TTAGTCATATCTCTAGTTGA+TGG + chr1_3:29705443-29705462 Msa0113690:intron 30.0%
TAGTCATATCTCTAGTTGAT+GGG + chr1_3:29705444-29705463 Msa0113690:intron 30.0%
TCTTCAATGTAGACTATTAC+GGG + chr1_3:29705505-29705524 Msa0113690:intron 30.0%
!! TACCCAAAACACTTGTTATA+GGG + chr1_3:29705851-29705870 Msa0113690:intron 30.0%
! TAACAAATTTTACAACCCCT+TGG + chr1_3:29705889-29705908 Msa0113690:intron 30.0%
!!! ATACATCACTTTTTCTAGCT+AGG + chr1_3:29706061-29706080 Msa0113690:intron 30.0%
!!! TACATCACTTTTTCTAGCTA+GGG + chr1_3:29706062-29706081 Msa0113690:intron 30.0%
CCTTTAGCAAGTTTAGTATT+TGG - chr1_3:29706151-29706170 None:intergenic 30.0%
!! CCAAATACTAAACTTGCTAA+AGG + chr1_3:29706148-29706167 Msa0113690:intron 30.0%
ATAAGGAAAATAACCTGTGA+AGG - chr1_3:29706646-29706665 None:intergenic 30.0%
! TTTTCCTTATCACAATGCTT+TGG + chr1_3:29706656-29706675 Msa0113690:intron 30.0%
TGAGTTTAAAAACAAACGGA+GGG - chr1_3:29706816-29706835 None:intergenic 30.0%
CTCTCAGTAATAAATAGCTA+AGG - chr1_3:29706921-29706940 None:intergenic 30.0%
ATTACTGAGAGAGAAATAGA+TGG + chr1_3:29706930-29706949 Msa0113690:intron 30.0%
AACAATGTGTTTATATGTGG+GGG + chr1_3:29707051-29707070 Msa0113690:intron 30.0%
CCATCTTATAAATTGTGGTT+GGG - chr1_3:29707119-29707138 None:intergenic 30.0%
ACCATCTTATAAATTGTGGT+TGG - chr1_3:29707120-29707139 None:intergenic 30.0%
! ATCTGGAGCATGAATATAAA+TGG - chr1_3:29707207-29707226 None:intergenic 30.0%
CTGAGATAGTGATATAATAC+AGG + chr1_3:29707355-29707374 Msa0113690:intron 30.0%
TATAATACAGGAATCCTAGT+AGG + chr1_3:29707367-29707386 Msa0113690:intron 30.0%
! AAAAGCTAGTTTCATGTGTT+TGG + chr1_3:29707476-29707495 Msa0113690:intron 30.0%
CGCTACTTATATAATTGAAG+GGG - chr1_3:29707955-29707974 None:intergenic 30.0%
!! ATGTCAAATCAAAAGGCATT+TGG - chr1_3:29708266-29708285 None:intergenic 30.0%
CATCCAAATATCATTAGTGT+AGG + chr1_3:29708283-29708302 Msa0113690:intron 30.0%
CAACCTACACTAATGATATT+TGG - chr1_3:29708289-29708308 None:intergenic 30.0%
TTATCTGTATGTGCTCTATA+AGG - chr1_3:29708516-29708535 None:intergenic 30.0%
CATTATAATTAGTTGGCCAA+TGG - chr1_3:29708603-29708622 None:intergenic 30.0%
TTGGCCAACTAATTATAATG+TGG + chr1_3:29708603-29708622 Msa0113690:intron 30.0%
TTGTTTCAGATTCAACCATA+TGG - chr1_3:29708663-29708682 None:intergenic 30.0%
TTCATAATGTAGGAGAAAGA+AGG - chr1_3:29708718-29708737 None:intergenic 30.0%
CTGCAAACATTTCATAATGT+AGG - chr1_3:29708728-29708747 None:intergenic 30.0%
ACTTATTCACACTTTAGCAT+TGG - chr1_3:29708761-29708780 None:intergenic 30.0%
ACTTGGATTACAGTTTATTC+AGG + chr1_3:29708819-29708838 Msa0113690:three_prime_UTR 30.0%
TGAGCTATTCATGATTTACT+TGG + chr1_3:29708968-29708987 Msa0113690:intron 30.0%
ATCAAAGGGAAAATTGAGTA+TGG + chr1_3:29709028-29709047 Msa0113690:intron 30.0%
TCTAATATGTTTGACCCAAA+AGG - chr1_3:29709095-29709114 None:intergenic 30.0%
ATTTACGAAATTCACCCAAA+CGG + chr1_3:29709125-29709144 Msa0113690:intron 30.0%
GGTTAGTGAAATCAATTAAG+TGG + chr1_3:29709185-29709204 Msa0113690:intron 30.0%
! ATGGACCATTGTTGTTAAAT+GGG + chr1_3:29709217-29709236 Msa0113690:intron 30.0%
! ATGTTTTCAATTGCAGATTG+CGG - chr1_3:29709351-29709370 None:intergenic 30.0%
TGCCAATAGTATTTCTTGTT+GGG + chr1_3:29709383-29709402 Msa0113690:intron 30.0%
!!! ATTTTTAGCAAACTAGTTGC+AGG + chr1_3:29709477-29709496 Msa0113690:intron 30.0%
! AGGGATTTTCATTGTTAGTT+GGG - chr1_3:29709596-29709615 None:intergenic 30.0%
! TAGGGATTTTCATTGTTAGT+TGG - chr1_3:29709597-29709616 None:intergenic 30.0%
! GAAATTTTAAGCAAAACAGG+GGG - chr1_3:29709648-29709667 None:intergenic 30.0%
! CGAAATTTTAAGCAAAACAG+GGG - chr1_3:29709649-29709668 None:intergenic 30.0%
! CACGAAATTTTAAGCAAAAC+AGG - chr1_3:29709651-29709670 None:intergenic 30.0%
ACAAGCTTAACCATCAATTA+AGG - chr1_3:29709692-29709711 None:intergenic 30.0%
TCTCAACATTGTCATTACAA+TGG + chr1_3:29709950-29709969 Msa0113690:three_prime_UTR 30.0%
CTCAACATTGTCATTACAAT+GGG + chr1_3:29709951-29709970 Msa0113690:three_prime_UTR 30.0%
TTCTTCTTCTTTCAAGAGCT+GGG + chr1_3:29693587-29693606 Msa0113690:CDS 35.0%
GAGAATGTTTATGCGATGAT+AGG - chr1_3:29693838-29693857 None:intergenic 35.0%
AATAAGCTGAAACCAGCTTA+TGG + chr1_3:29693950-29693969 Msa0113690:intron 35.0%
TTTATGATGAGTCCATAAGC+TGG - chr1_3:29693965-29693984 None:intergenic 35.0%
TCCTGAACTGGAATTATATC+AGG + chr1_3:29694187-29694206 Msa0113690:intron 35.0%
ACCTGATATAATTCCAGTTC+AGG - chr1_3:29694191-29694210 None:intergenic 35.0%
TTCATTAATCTTTCCTGACC+AGG + chr1_3:29694212-29694231 Msa0113690:intron 35.0%
ATTGCAAACAACCATTTACC+TGG - chr1_3:29694233-29694252 None:intergenic 35.0%
!! TACTCTGACAAAGTTCTAGA+TGG + chr1_3:29694252-29694271 Msa0113690:CDS 35.0%
! ATTTTACCTAATTCACGGGA+TGG + chr1_3:29694275-29694294 Msa0113690:CDS 35.0%
CATACCAACATTCTGCATAT+CGG - chr1_3:29694325-29694344 None:intergenic 35.0%
! ATCTTGTTTGTAGTAGGATG+GGG + chr1_3:29694514-29694533 Msa0113690:CDS 35.0%
CAGTGTATCATTCTTCCAAT+TGG + chr1_3:29694697-29694716 Msa0113690:CDS 35.0%
!! TCTTAATGATGGATACACCT+TGG + chr1_3:29694929-29694948 Msa0113690:intron 35.0%
! CAAGTATTGTAGAAAGGACA+TGG + chr1_3:29695089-29695108 Msa0113690:CDS 35.0%
GCTTCTTGTATAGTGCAATT+TGG + chr1_3:29695114-29695133 Msa0113690:CDS 35.0%
ATTATTTGCGACTTTGTGTG+TGG + chr1_3:29695194-29695213 Msa0113690:intron 35.0%
TTATTTGCGACTTTGTGTGT+GGG + chr1_3:29695195-29695214 Msa0113690:intron 35.0%
CATTAAACTCCGGTATAATG+TGG - chr1_3:29695339-29695358 None:intergenic 35.0%
CACATTATACCGGAGTTTAA+TGG + chr1_3:29695337-29695356 Msa0113690:intron 35.0%
!! TAGGGTACCTAGAGATATTT+TGG + chr1_3:29695542-29695561 Msa0113690:intron 35.0%
!! AGGGTACCTAGAGATATTTT+GGG + chr1_3:29695543-29695562 Msa0113690:intron 35.0%
TCATATAGCTAAGCTAAGCA+TGG - chr1_3:29695781-29695800 None:intergenic 35.0%
TTAGGCACCATATGTTTCAA+AGG - chr1_3:29695827-29695846 None:intergenic 35.0%
AGTAACAATACAGGCTAATG+AGG - chr1_3:29696025-29696044 None:intergenic 35.0%
TTATATCCCAACAAAGATGG+TGG + chr1_3:29696084-29696103 Msa0113690:intron 35.0%
GAAATTCCACCATCTTTGTT+GGG - chr1_3:29696093-29696112 None:intergenic 35.0%
TGAAATTCCACCATCTTTGT+TGG - chr1_3:29696094-29696113 None:intergenic 35.0%
GTATGTAGAAGACTTGTAGT+TGG + chr1_3:29696133-29696152 Msa0113690:intron 35.0%
CATGTAATATGTCTGCAACA+TGG + chr1_3:29696435-29696454 Msa0113690:intron 35.0%
CTGAAATTAGAGTCGTTGAT+TGG - chr1_3:29696682-29696701 None:intergenic 35.0%
CAATCAACGACTCTAATTTC+AGG + chr1_3:29696680-29696699 Msa0113690:intron 35.0%
! CATACTGACATGATCAGTTT+TGG + chr1_3:29696814-29696833 Msa0113690:intron 35.0%
AATACATGTACACCTTTCCA+GGG + chr1_3:29696883-29696902 Msa0113690:intron 35.0%
AATTCACTGAAGAATCAGGT+TGG - chr1_3:29696949-29696968 None:intergenic 35.0%
TTGGATGACATAATGGTGAA+GGG - chr1_3:29696991-29697010 None:intergenic 35.0%
TTGAACCTTGGATGACATAA+TGG - chr1_3:29696998-29697017 None:intergenic 35.0%
! GTATATTCAGCTGTTTCAAC+TGG - chr1_3:29697022-29697041 None:intergenic 35.0%
AATGGCCCAATTGTATTTCT+TGG + chr1_3:29697048-29697067 Msa0113690:CDS 35.0%
AAACCACATGTTCCTTTGTT+TGG + chr1_3:29697360-29697379 Msa0113690:intron 35.0%
CACAGTAATGTTCCAAACAA+AGG - chr1_3:29697375-29697394 None:intergenic 35.0%
! TGTCTCACAATTTTCCATGA+AGG + chr1_3:29697544-29697563 Msa0113690:intron 35.0%
!! TTGAGTTTGACTTGCATACT+TGG + chr1_3:29697673-29697692 Msa0113690:intron 35.0%
!! TGAGTTTGACTTGCATACTT+GGG + chr1_3:29697674-29697693 Msa0113690:intron 35.0%
TCTTCTTTATTGAAGGCAGA+AGG + chr1_3:29697791-29697810 Msa0113690:intron 35.0%
! CTCAACCCAAAATTCTAAGA+GGG - chr1_3:29697845-29697864 None:intergenic 35.0%
TCTAAGAGGGATAAACTAGA+GGG - chr1_3:29697912-29697931 None:intergenic 35.0%
! TTCTAAGAGGGATAAACTAG+AGG - chr1_3:29697913-29697932 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr1_3:29697866-29697885 Msa0113690:intron 35.0%
AGGCATTAACTCATTCAATG+TGG + chr1_3:29698010-29698029 Msa0113690:intron 35.0%
GGCATTAACTCATTCAATGT+GGG + chr1_3:29698011-29698030 Msa0113690:intron 35.0%
! CCGATACCATCTTAGAATTT+TGG + chr1_3:29698139-29698158 Msa0113690:intron 35.0%
! CACAACCCAAAATTCTAAGA+TGG - chr1_3:29698148-29698167 None:intergenic 35.0%
CCTAACTCAACCTTTCAAAT+CGG + chr1_3:29698168-29698187 Msa0113690:intron 35.0%
AGGTACGAACATATGTGATA+AGG - chr1_3:29698231-29698250 None:intergenic 35.0%
GTACCTTATCTCATCAAATG+TGG + chr1_3:29698245-29698264 Msa0113690:intron 35.0%
! CTCAACAATTCCTTTTGTTG+TGG + chr1_3:29698272-29698291 Msa0113690:intron 35.0%
AACAAAACACCCACAACAAA+AGG - chr1_3:29698285-29698304 None:intergenic 35.0%
ACAATAGCCACAAAACTACT+AGG - chr1_3:29698318-29698337 None:intergenic 35.0%
!!! TAGTAGTTTTGTGGCTATTG+TGG + chr1_3:29698317-29698336 Msa0113690:intron 35.0%
CACAAAACAAACACAATGCA+AGG - chr1_3:29698366-29698385 None:intergenic 35.0%
!!! TTTGTTTTGTGCTTTCCTAC+AGG + chr1_3:29698375-29698394 Msa0113690:intron 35.0%
TTACACCATAAAATGCCTGT+AGG - chr1_3:29698393-29698412 None:intergenic 35.0%
GGTATTACTATTCTGTTGCT+TGG + chr1_3:29698440-29698459 Msa0113690:intron 35.0%
!!! CGCAAGGTTTTAAACTGATA+TGG - chr1_3:29698500-29698519 None:intergenic 35.0%
! CTAATTTTCATCATGACAGG+AGG + chr1_3:29698657-29698676 Msa0113690:intron 35.0%
CTTCAGCAAACTGAAATGTT+TGG + chr1_3:29698708-29698727 Msa0113690:CDS 35.0%
ACGAGATGGCATATCAAATT+AGG - chr1_3:29698923-29698942 None:intergenic 35.0%
TTTGATATGCCATCTCGTTT+AGG + chr1_3:29698925-29698944 Msa0113690:intron 35.0%
ATTGAAAGACACATGTTCCT+CGG - chr1_3:29698959-29698978 None:intergenic 35.0%
!!! GTGGAGTGAACTTATTTTGA+AGG + chr1_3:29699050-29699069 Msa0113690:CDS 35.0%
!! AGCACCAATAACTGTTTTTC+AGG + chr1_3:29699196-29699215 Msa0113690:intron 35.0%
!! GCACCAATAACTGTTTTTCA+GGG + chr1_3:29699197-29699216 Msa0113690:intron 35.0%
TGACCCTGAAAAACAGTTAT+TGG - chr1_3:29699203-29699222 None:intergenic 35.0%
!!! AACTGTTTTTCAGGGTCATT+TGG + chr1_3:29699205-29699224 Msa0113690:intron 35.0%
AAGATAAAACACGTCATAGG+AGG + chr1_3:29699418-29699437 Msa0113690:intron 35.0%
AGATAAAACACGTCATAGGA+GGG + chr1_3:29699419-29699438 Msa0113690:intron 35.0%
!!! AGGGAGCATTTTATAAAGCT+GGG - chr1_3:29699450-29699469 None:intergenic 35.0%
TCTCTTATAAAAAGGACCAG+AGG + chr1_3:29699563-29699582 Msa0113690:intron 35.0%
CTCTTATAAAAAGGACCAGA+GGG + chr1_3:29699564-29699583 Msa0113690:intron 35.0%
GTAATTCAAACCTCTCTCAT+GGG - chr1_3:29699620-29699639 None:intergenic 35.0%
TGTAATTCAAACCTCTCTCA+TGG - chr1_3:29699621-29699640 None:intergenic 35.0%
! ACTTTAACACAAGAGGGTAT+GGG - chr1_3:29699646-29699665 None:intergenic 35.0%
GTGTACACTTTAACACAAGA+GGG - chr1_3:29699652-29699671 None:intergenic 35.0%
AGTGTACACTTTAACACAAG+AGG - chr1_3:29699653-29699672 None:intergenic 35.0%
GTGATTCAATCATCTTTCAG+GGG + chr1_3:29700057-29700076 Msa0113690:intron 35.0%
!!! ATATTTTAACCTATGAGGGG+AGG + chr1_3:29700132-29700151 Msa0113690:intron 35.0%
!!! TATTTTAACCTATGAGGGGA+GGG + chr1_3:29700133-29700152 Msa0113690:intron 35.0%
AATATACCAAGCAATGGCAA+AGG - chr1_3:29700262-29700281 None:intergenic 35.0%
CAAGTAACAACACTTCAACT+TGG + chr1_3:29700292-29700311 Msa0113690:intron 35.0%
CATTGTTGTCTTTGGTATAG+AGG - chr1_3:29700443-29700462 None:intergenic 35.0%
! CTAGTTTGCATTGTTGTCTT+TGG - chr1_3:29700451-29700470 None:intergenic 35.0%
CAAAGACAACAATGCAAACT+AGG + chr1_3:29700449-29700468 Msa0113690:intron 35.0%
TCATTCTCGAAACTCTTAGT+TGG - chr1_3:29700527-29700546 None:intergenic 35.0%
GATGGAAAGAGGATAAAGTA+AGG + chr1_3:29700609-29700628 Msa0113690:intron 35.0%
CACTTCTCAACAAAATATGG+AGG - chr1_3:29700784-29700803 None:intergenic 35.0%
TGTTGAGAAGTGATGATACA+AGG + chr1_3:29700792-29700811 Msa0113690:intron 35.0%
ACAAAAGAGGTCTCCAAAAT+AGG + chr1_3:29701086-29701105 Msa0113690:intron 35.0%
! GGATACAACTTCAAGGTATT+TGG + chr1_3:29701107-29701126 Msa0113690:intron 35.0%
AGGGTAACACAGTTAGTATT+TGG - chr1_3:29701327-29701346 None:intergenic 35.0%
TGTTGCTGTGAAGATACTTA+AGG + chr1_3:29701353-29701372 Msa0113690:CDS 35.0%
GTGTGACCTATGAAATAAAC+TGG - chr1_3:29701556-29701575 None:intergenic 35.0%
! CCCATTAGAAGTACAATGTT+TGG - chr1_3:29701599-29701618 None:intergenic 35.0%
TTTAAGTATGGCATATGACG+TGG + chr1_3:29701831-29701850 Msa0113690:CDS 35.0%
GAGATGTGATATGTTTGTCT+AGG + chr1_3:29701940-29701959 Msa0113690:intron 35.0%
AAATCTCTATGAACAATGGG+AGG - chr1_3:29701998-29702017 None:intergenic 35.0%
ATTTCAAAGGAAGGAGATGA+AGG - chr1_3:29702241-29702260 None:intergenic 35.0%
GGCAATTCAATTTCAAAGGA+AGG - chr1_3:29702250-29702269 None:intergenic 35.0%
TACTTGCTTAGAATAGAGCT+AGG + chr1_3:29702836-29702855 Msa0113690:intron 35.0%
GTTATTGTATGCTTTCTAGG+TGG - chr1_3:29703000-29703019 None:intergenic 35.0%
CACGTTATTGTATGCTTTCT+AGG - chr1_3:29703003-29703022 None:intergenic 35.0%
! AACGCAAATGCTCATTTTGT+AGG - chr1_3:29703052-29703071 None:intergenic 35.0%
!! AAGAGCACTACTATTAGGAA+GGG - chr1_3:29703097-29703116 None:intergenic 35.0%
!! TATGGAAGAGCACTACTATT+AGG - chr1_3:29703102-29703121 None:intergenic 35.0%
!!! TGGTTTTAAGATTGTGGAAC+AGG + chr1_3:29703124-29703143 Msa0113690:intron 35.0%
CTAAATCTTCTCAACGAGAT+AGG - chr1_3:29703194-29703213 None:intergenic 35.0%
CTATCTCGTTGAGAAGATTT+AGG + chr1_3:29703192-29703211 Msa0113690:intron 35.0%
TACCAATCATAACCCTTTGT+TGG + chr1_3:29703319-29703338 Msa0113690:intron 35.0%
ACCAATCATAACCCTTTGTT+GGG + chr1_3:29703320-29703339 Msa0113690:intron 35.0%
! TATTTGTGAGACTTTTCCAG+AGG - chr1_3:29703368-29703387 None:intergenic 35.0%
TGGAAAAGTCTCACAAATAG+TGG + chr1_3:29703369-29703388 Msa0113690:intron 35.0%
GGAAAAGTCTCACAAATAGT+GGG + chr1_3:29703370-29703389 Msa0113690:intron 35.0%
! TCTCAAACTTCTTTTCCTGT+AGG + chr1_3:29703666-29703685 Msa0113690:intron 35.0%
!! TTCAGATTTCTAGAACCTGT+AGG + chr1_3:29703754-29703773 Msa0113690:intron 35.0%
!!! AGTTTTTTCCATTGAGTCAC+TGG + chr1_3:29703876-29703895 Msa0113690:intron 35.0%
!!! GTTTTTTCCATTGAGTCACT+GGG + chr1_3:29703877-29703896 Msa0113690:intron 35.0%
GCTGAAATATTCATTCTAGG+AGG - chr1_3:29703973-29703992 None:intergenic 35.0%
GGAGCTGAAATATTCATTCT+AGG - chr1_3:29703976-29703995 None:intergenic 35.0%
!! AGCTCTAGGTTATTCAATCT+AGG - chr1_3:29704212-29704231 None:intergenic 35.0%
AGAGAGAACACTCCTTAAAT+AGG + chr1_3:29704283-29704302 Msa0113690:intron 35.0%
GATAGGATCACAAAATAGAG+AGG + chr1_3:29704344-29704363 Msa0113690:intron 35.0%
AAAACTGATCTCAATAAGGG+TGG + chr1_3:29704384-29704403 Msa0113690:intron 35.0%
AAACTGATCTCAATAAGGGT+GGG + chr1_3:29704385-29704404 Msa0113690:intron 35.0%
CAAATTAGTTCGGTTCAGTT+CGG - chr1_3:29704432-29704451 None:intergenic 35.0%
!! AAACTTTAAACGGTTCGGTT+TGG - chr1_3:29704474-29704493 None:intergenic 35.0%
! AAACCGAACCGTTTAAAGTT+TGG + chr1_3:29704473-29704492 Msa0113690:intron 35.0%
CTTCCAAACTTTAAACGGTT+CGG - chr1_3:29704479-29704498 None:intergenic 35.0%
TTGGTTCATAGGTAAGCAAA+TGG - chr1_3:29704536-29704555 None:intergenic 35.0%
TGATGTATCCTTCAAAGCAA+AGG - chr1_3:29704754-29704773 None:intergenic 35.0%
TGAAGGATACATCAATCTCA+AGG + chr1_3:29704760-29704779 Msa0113690:intron 35.0%
AGTTCAAACTCAAATGAAGC+AGG + chr1_3:29704885-29704904 Msa0113690:intron 35.0%
TAGAATTGAAGGATCTTGGA+AGG - chr1_3:29704918-29704937 None:intergenic 35.0%
! TCCTTTACGATTTGCTTAGT+TGG + chr1_3:29704955-29704974 Msa0113690:intron 35.0%
ACCAACTAAGCAAATCGTAA+AGG - chr1_3:29704959-29704978 None:intergenic 35.0%
TACAATGAGTTTATACCTCG+TGG + chr1_3:29705015-29705034 Msa0113690:intron 35.0%
! GTGTAAAGTAGAGAGTATGA+TGG + chr1_3:29705045-29705064 Msa0113690:intron 35.0%
CTAAGATACACTGAAAGTGA+AGG - chr1_3:29705071-29705090 None:intergenic 35.0%
CTTCACTTTCAGTGTATCTT+AGG + chr1_3:29705069-29705088 Msa0113690:intron 35.0%
CTCTAATGCAATTGAGTACA+GGG + chr1_3:29705186-29705205 Msa0113690:intron 35.0%
ACTATTCATCCATGAAGACT+TGG - chr1_3:29705237-29705256 None:intergenic 35.0%
ATGCTGATCTGATGTATCAT+TGG + chr1_3:29705320-29705339 Msa0113690:intron 35.0%
TGCTGATCTGATGTATCATT+GGG + chr1_3:29705321-29705340 Msa0113690:intron 35.0%
TCATTGGGTTCACTATTTCA+AGG + chr1_3:29705336-29705355 Msa0113690:intron 35.0%
TTGAGAGACTAGGAAACAAA+AGG - chr1_3:29705577-29705596 None:intergenic 35.0%
CTATCATGTATTGAGAGACT+AGG - chr1_3:29705587-29705606 None:intergenic 35.0%
AAACGGTAATCATAATCGCA+AGG + chr1_3:29705610-29705629 Msa0113690:intron 35.0%
TTGTCACACTAAGCATGATT+TGG + chr1_3:29705650-29705669 Msa0113690:intron 35.0%
!! ATGATTTGGTGAGGTTGTAT+GGG + chr1_3:29705664-29705683 Msa0113690:intron 35.0%
GTGTTTAGGTGTAGAATTAG+TGG + chr1_3:29705692-29705711 Msa0113690:intron 35.0%
! AAAAACTAACTCTAGAGGTG+AGG - chr1_3:29705778-29705797 None:intergenic 35.0%
!!! CACCTCTAGAGTTAGTTTTT+CGG + chr1_3:29705778-29705797 Msa0113690:intron 35.0%
ATCCGAAAAACTAACTCTAG+AGG - chr1_3:29705783-29705802 None:intergenic 35.0%
!! CTACCCAAAACACTTGTTAT+AGG + chr1_3:29705850-29705869 Msa0113690:intron 35.0%
!! ACCCAAAACACTTGTTATAG+GGG + chr1_3:29705852-29705871 Msa0113690:intron 35.0%
TGGAAGCAGAAGACAAATAA+GGG - chr1_3:29705917-29705936 None:intergenic 35.0%
TTGGAAGCAGAAGACAAATA+AGG - chr1_3:29705918-29705937 None:intergenic 35.0%
!! TACTAAACTTGCTAAAGGCA+AGG + chr1_3:29706153-29706172 Msa0113690:intron 35.0%
TATATCCATAAACGCATGCA+AGG - chr1_3:29706281-29706300 None:intergenic 35.0%
TGCATGCGTTTATGGATATA+TGG + chr1_3:29706281-29706300 Msa0113690:intron 35.0%
TATTTGCCTTTGTACGTGAA+AGG - chr1_3:29706373-29706392 None:intergenic 35.0%
AAACTCTAAATCAGCCTGAA+TGG + chr1_3:29706506-29706525 Msa0113690:intron 35.0%
AAATGCGATGTATTCAGCTT+TGG + chr1_3:29706568-29706587 Msa0113690:CDS 35.0%
!! CAATCCAAAGCATTGTGATA+AGG - chr1_3:29706663-29706682 None:intergenic 35.0%
CAAAATCAGCACTCAAAAAG+AGG - chr1_3:29706724-29706743 None:intergenic 35.0%
!!! CTCTTTTTGAGTGCTGATTT+TGG + chr1_3:29706722-29706741 Msa0113690:intron 35.0%
GTGAGTTTAAAAACAAACGG+AGG - chr1_3:29706817-29706836 None:intergenic 35.0%
CCCAACCACAATTTATAAGA+TGG + chr1_3:29707116-29707135 Msa0113690:intron 35.0%
GGAGCATGAATATAAATGGT+GGG - chr1_3:29707203-29707222 None:intergenic 35.0%
TGGAGCATGAATATAAATGG+TGG - chr1_3:29707204-29707223 None:intergenic 35.0%
TATCATCTCTTATCCGATGT+GGG - chr1_3:29707258-29707277 None:intergenic 35.0%
TTATCATCTCTTATCCGATG+TGG - chr1_3:29707259-29707278 None:intergenic 35.0%
CAATTCACGTAGAAAATCTC+AGG + chr1_3:29707551-29707570 Msa0113690:intron 35.0%
TAATCACTCATCATGGTAAG+AGG + chr1_3:29707693-29707712 Msa0113690:intron 35.0%
TGCATTACAGTAAGCATGAA+AGG + chr1_3:29707723-29707742 Msa0113690:intron 35.0%
!! TCATCCCTTCTTTTGATAGT+TGG + chr1_3:29707919-29707938 Msa0113690:intron 35.0%
TACGAATAGAACAAAGGAGA+AGG - chr1_3:29708044-29708063 None:intergenic 35.0%
AGATAACTAACATACAGCCT+TGG - chr1_3:29708181-29708200 None:intergenic 35.0%
AGTAATGATCTATGCACAGA+CGG - chr1_3:29708232-29708251 None:intergenic 35.0%
!!! AGATGAAGTTTTAAGCTTGG+TGG + chr1_3:29708443-29708462 Msa0113690:intron 35.0%
AATGGCATAACTCTGAATGT+AGG - chr1_3:29708481-29708500 None:intergenic 35.0%
TACATTCAGAGTTATGCCAT+TGG + chr1_3:29708480-29708499 Msa0113690:intron 35.0%
TACAGATAACTCATCAACGA+TGG + chr1_3:29708527-29708546 Msa0113690:intron 35.0%
ATAATTAGTTGGCCAATGGT+TGG - chr1_3:29708599-29708618 None:intergenic 35.0%
TTGCAAGCTATGTTCAGAAA+TGG - chr1_3:29708931-29708950 None:intergenic 35.0%
TAGTTAACCCAGGAAGAAAT+TGG + chr1_3:29709164-29709183 Msa0113690:intron 35.0%
TCACTAACCAATTTCTTCCT+GGG - chr1_3:29709174-29709193 None:intergenic 35.0%
TTCACTAACCAATTTCTTCC+TGG - chr1_3:29709175-29709194 None:intergenic 35.0%
AATTAAGTGGTTCACCTTCA+TGG + chr1_3:29709198-29709217 Msa0113690:intron 35.0%
TTAACAACAATGGTCCATGA+AGG - chr1_3:29709215-29709234 None:intergenic 35.0%
! CATGGACCATTGTTGTTAAA+TGG + chr1_3:29709216-29709235 Msa0113690:intron 35.0%
CAACAAGAAATACTATTGGC+AGG - chr1_3:29709384-29709403 None:intergenic 35.0%
CTGCCAATAGTATTTCTTGT+TGG + chr1_3:29709382-29709401 Msa0113690:intron 35.0%
GACCCAACAAGAAATACTAT+TGG - chr1_3:29709388-29709407 None:intergenic 35.0%
AATTGTCTATTGCTTGGCTT+AGG - chr1_3:29709534-29709553 None:intergenic 35.0%
! TGTTAGTTGGGGTACTTAAT+TGG - chr1_3:29709584-29709603 None:intergenic 35.0%
! GGGATTTTCATTGTTAGTTG+GGG - chr1_3:29709595-29709614 None:intergenic 35.0%
TACTGGTGTACCTTAATTGA+TGG + chr1_3:29709679-29709698 Msa0113690:intron 35.0%
GAGGAGAAACAAGACCAAAA+TGG + chr1_3:29693388-29693407 Msa0113690:five_prime_UTR 40.0%
GAGAAACAAGACCAAAATGG+TGG + chr1_3:29693391-29693410 Msa0113690:five_prime_UTR 40.0%
TTGTTTGAGAGAGCTGAGAT+AGG + chr1_3:29693473-29693492 Msa0113690:five_prime_UTR 40.0%
GAGCTGAGATAGGAAATGTA+CGG + chr1_3:29693483-29693502 Msa0113690:exon 40.0%
GAAGATGAAGAAGACGAAGA+AGG + chr1_3:29693561-29693580 Msa0113690:CDS 40.0%
CTTCTTCTTCTTTCAAGAGC+TGG + chr1_3:29693586-29693605 Msa0113690:CDS 40.0%
ATCCAATCGCTTCTTGGATT+TGG + chr1_3:29693689-29693708 Msa0113690:CDS 40.0%
TTCCAAATCCAAGAAGCGAT+TGG - chr1_3:29693694-29693713 None:intergenic 40.0%
GAAGAAGAAGAAGAAGGAGA+AGG - chr1_3:29693729-29693748 None:intergenic 40.0%
TCGGAAGAAGAAGAAGAAGA+AGG - chr1_3:29693735-29693754 None:intergenic 40.0%
TGAAAGTGATTGAGGGGAAT+CGG - chr1_3:29693754-29693773 None:intergenic 40.0%
!!! AATCACTTTCACACCGGTTT+TGG + chr1_3:29693763-29693782 Msa0113690:CDS 40.0%
!!! ATCACTTTCACACCGGTTTT+GGG + chr1_3:29693764-29693783 Msa0113690:CDS 40.0%
AGCTAGATTGAAGAGTCTTC+AGG + chr1_3:29693926-29693945 Msa0113690:intron 40.0%
ATCTTTCCTGACCAGGTAAA+TGG + chr1_3:29694219-29694238 Msa0113690:intron 40.0%
AAACAACCATTTACCTGGTC+AGG - chr1_3:29694228-29694247 None:intergenic 40.0%
!! AGTACCGATATGCAGAATGT+TGG + chr1_3:29694318-29694337 Msa0113690:CDS 40.0%
ACAACTGACGAGTTATCACA+CGG - chr1_3:29694381-29694400 None:intergenic 40.0%
TGATAACTCGTCAGTTGTAG+TGG + chr1_3:29694383-29694402 Msa0113690:CDS 40.0%
CTGATCAGTTGCATCTTTGA+TGG - chr1_3:29694487-29694506 None:intergenic 40.0%
TCTTCCGACGAGGAAAATTT+AGG + chr1_3:29694631-29694650 Msa0113690:CDS 40.0%
! CACACCTAAATTTTCCTCGT+CGG - chr1_3:29694638-29694657 None:intergenic 40.0%
! CTTTAAAGAGCAATGCTCGA+TGG - chr1_3:29694747-29694766 None:intergenic 40.0%
ATTCACAGTTCGAAACTCCA+AGG - chr1_3:29694949-29694968 None:intergenic 40.0%
! GGGATGCAAGTATTGTAGAA+AGG + chr1_3:29695083-29695102 Msa0113690:CDS 40.0%
!! TAGTGCAATTTGGTTCTGAC+AGG + chr1_3:29695124-29695143 Msa0113690:CDS 40.0%
! TATACCGGAGTTTAATGGAC+TGG + chr1_3:29695342-29695361 Msa0113690:intron 40.0%
! GGGTACCTAGAGATATTTTG+GGG + chr1_3:29695544-29695563 Msa0113690:intron 40.0%
!! ACCTAGAGATATTTTGGGGA+AGG + chr1_3:29695548-29695567 Msa0113690:intron 40.0%
TCCTTCCCCAAAATATCTCT+AGG - chr1_3:29695552-29695571 None:intergenic 40.0%
!! TGGCGTTCTTACACTAGTTT+TGG - chr1_3:29695628-29695647 None:intergenic 40.0%
CACCAAAATGAGCCAAGAAT+TGG + chr1_3:29695746-29695765 Msa0113690:intron 40.0%
! CACCAATTCTTGGCTCATTT+TGG - chr1_3:29695751-29695770 None:intergenic 40.0%
AACGTTAGAGATATGGTGAC+AGG + chr1_3:29695801-29695820 Msa0113690:intron 40.0%
!! TGACAGGCCTTTGAAACATA+TGG + chr1_3:29695817-29695836 Msa0113690:intron 40.0%
TTAGGAACCCAGTAATTGGA+TGG + chr1_3:29695883-29695902 Msa0113690:intron 40.0%
ATAGCACTTGTCTACAAGAC+CGG + chr1_3:29696243-29696262 Msa0113690:intron 40.0%
TAAACACAACCTTCTGTCAC+CGG - chr1_3:29696265-29696284 None:intergenic 40.0%
GATCAGAGACATGATAGACT+CGG + chr1_3:29696612-29696631 Msa0113690:intron 40.0%
CTCTTGAGTCTTGAATCTCT+TGG - chr1_3:29696643-29696662 None:intergenic 40.0%
GAATACATGTACACCTTTCC+AGG + chr1_3:29696882-29696901 Msa0113690:intron 40.0%
CAATCATATACTCCCTGGAA+AGG - chr1_3:29696898-29696917 None:intergenic 40.0%
! ATTGATTTAGTAGGAAGGCC+CGG + chr1_3:29696914-29696933 Msa0113690:CDS 40.0%
GCAGAATTCACTGAAGAATC+AGG - chr1_3:29696953-29696972 None:intergenic 40.0%
CTTGGATGACATAATGGTGA+AGG - chr1_3:29696992-29697011 None:intergenic 40.0%
CTTCACCATTATGTCATCCA+AGG + chr1_3:29696990-29697009 Msa0113690:CDS 40.0%
!!! GTTTGCCGTTTTTGTGTACA+TGG - chr1_3:29697344-29697363 None:intergenic 40.0%
GTTCCAAACAAAGGAACATG+TGG - chr1_3:29697366-29697385 None:intergenic 40.0%
GCTCAACCCAAAATTCTAAG+AGG - chr1_3:29697846-29697865 None:intergenic 40.0%
TAAGAGGGATAAACTAGAGG+GGG - chr1_3:29697910-29697929 None:intergenic 40.0%
CTAAGAGGGATAAACTAGAG+GGG - chr1_3:29697911-29697930 None:intergenic 40.0%
! CTCGACCCAAAATTCTAAGA+GGG - chr1_3:29697925-29697944 None:intergenic 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr1_3:29697868-29697887 None:intergenic 40.0%
GCTATCAGGTTACCACTATT+GGG - chr1_3:29698091-29698110 None:intergenic 40.0%
TGCTATCAGGTTACCACTAT+TGG - chr1_3:29698092-29698111 None:intergenic 40.0%
! CCGATTTGAAAGGTTGAGTT+AGG - chr1_3:29698171-29698190 None:intergenic 40.0%
!! AACCTTTCAAATCGGCTTGT+TGG + chr1_3:29698176-29698195 Msa0113690:intron 40.0%
GTCCCACATTTGATGAGATA+AGG - chr1_3:29698251-29698270 None:intergenic 40.0%
!! TTGTTGTGGGTGTTTTGTTG+AGG + chr1_3:29698286-29698305 Msa0113690:intron 40.0%
!!! TAGTTTTGTGGCTATTGTGG+TGG + chr1_3:29698320-29698339 Msa0113690:intron 40.0%
! GCTTTCCTACAGGCATTTTA+TGG + chr1_3:29698385-29698404 Msa0113690:intron 40.0%
TAATCCTTTGATTGCGTCTG+TGG + chr1_3:29698410-29698429 Msa0113690:intron 40.0%
TTTCTTCCTATGCCGTATCA+AGG - chr1_3:29698552-29698571 None:intergenic 40.0%
!! AGGAGGTACTGTTGATTGTA+GGG + chr1_3:29698674-29698693 Msa0113690:intron 40.0%
! TGTTGATTGTAGGGACAAAG+TGG + chr1_3:29698683-29698702 Msa0113690:CDS 40.0%
! TTTGGTGCAAACTATGCTGT+TGG + chr1_3:29698726-29698745 Msa0113690:CDS 40.0%
TTGGTGCAAACTATGCTGTT+GGG + chr1_3:29698727-29698746 Msa0113690:CDS 40.0%
TCTTACTGAACGCACCTATA+TGG - chr1_3:29698758-29698777 None:intergenic 40.0%
!! CTCTAAGACAAAGACTGCAT+GGG - chr1_3:29699148-29699167 None:intergenic 40.0%
!! TCTCTAAGACAAAGACTGCA+TGG - chr1_3:29699149-29699168 None:intergenic 40.0%
! ATTTGGAACTGTACTTCGTG+CGG + chr1_3:29699222-29699241 Msa0113690:CDS 40.0%
!!! GAGGGAGCATTTTATAAAGC+TGG - chr1_3:29699451-29699470 None:intergenic 40.0%
CTCTATTGTTATACTCCCTC+TGG - chr1_3:29699582-29699601 None:intergenic 40.0%
CACTTTAACACAAGAGGGTA+TGG - chr1_3:29699647-29699666 None:intergenic 40.0%
AAGGGAGTAGAGTGTAATTC+AGG - chr1_3:29699734-29699753 None:intergenic 40.0%
ATTCAATCATCTTTCAGGGG+AGG + chr1_3:29700060-29700079 Msa0113690:intron 40.0%
TATACTTTGCATAAGAGGGG+AGG + chr1_3:29700102-29700121 Msa0113690:intron 40.0%
ATACTTTGCATAAGAGGGGA+GGG + chr1_3:29700103-29700122 Msa0113690:intron 40.0%
GGCAAAGGTAACGTTTGAAT+TGG - chr1_3:29700247-29700266 None:intergenic 40.0%
CTTCTCACTTCTCTGATAAG+TGG + chr1_3:29700316-29700335 Msa0113690:intron 40.0%
TTGGTATAGAGGTCATTCCA+TGG - chr1_3:29700432-29700451 None:intergenic 40.0%
TCTCTCCAGTGAACTTTCTT+AGG - chr1_3:29700496-29700515 None:intergenic 40.0%
TCTAGGAGGAAGAGAAAATG+AGG + chr1_3:29700581-29700600 Msa0113690:intron 40.0%
AGAGAAAATGAGGATTGCGA+TGG + chr1_3:29700591-29700610 Msa0113690:intron 40.0%
! ATGATGCTGATGCTTTTGCA+TGG + chr1_3:29700825-29700844 Msa0113690:intron 40.0%
! TGCTTTTGCATGGATGTGTA+AGG + chr1_3:29700835-29700854 Msa0113690:intron 40.0%
TGTTCACTTGTACACTCTGT+AGG - chr1_3:29700967-29700986 None:intergenic 40.0%
CTAAACAGTAAACACCACCA+AGG - chr1_3:29701040-29701059 None:intergenic 40.0%
! AACTTCAAGGTATTTGGGAG+AGG + chr1_3:29701113-29701132 Msa0113690:intron 40.0%
CTTCATCTACATTGTCATCC+TGG - chr1_3:29701143-29701162 None:intergenic 40.0%
GCAAAGAAATCAGACGACTA+TGG + chr1_3:29701174-29701193 Msa0113690:intron 40.0%
TACTAACTGTGTTACCCTTC+AGG + chr1_3:29701329-29701348 Msa0113690:intron 40.0%
GTGAAGATACTTAAGGTGCA+AGG + chr1_3:29701360-29701379 Msa0113690:CDS 40.0%
!!! TTCTTTTTCAGATTGAGGCC+AGG + chr1_3:29701465-29701484 Msa0113690:intron 40.0%
!!! TCTTTTTCAGATTGAGGCCA+GGG + chr1_3:29701466-29701485 Msa0113690:intron 40.0%
TGCAATTCAAGGAGACCATT+TGG - chr1_3:29701747-29701766 None:intergenic 40.0%
!! TGAGAAGCGTCGTTTAAGTA+TGG + chr1_3:29701819-29701838 Msa0113690:CDS 40.0%
GATATGTTTGTCTAGGCAAG+TGG + chr1_3:29701947-29701966 Msa0113690:intron 40.0%
TGGGAAGAAGATGGATCAAT+GGG - chr1_3:29702218-29702237 None:intergenic 40.0%
ATCAGAGAGTTAAATGGGCA+TGG + chr1_3:29702396-29702415 Msa0113690:intron 40.0%
TCAGAGAGTTAAATGGGCAT+GGG + chr1_3:29702397-29702416 Msa0113690:intron 40.0%
TTAGAATAGAGCTAGGTTCC+TGG + chr1_3:29702843-29702862 Msa0113690:intron 40.0%
ATGCTTTCTAGGTGGAAAAC+TGG - chr1_3:29702992-29703011 None:intergenic 40.0%
!! GAAGAGCACTACTATTAGGA+AGG - chr1_3:29703098-29703117 None:intergenic 40.0%
TAGTAGTGCTCTTCCATACA+TGG + chr1_3:29703104-29703123 Msa0113690:intron 40.0%
AAGATTGTGGAACAGGATCT+AGG + chr1_3:29703131-29703150 Msa0113690:intron 40.0%
!! ATAGAGGGCACTCCTTAAAT+AGG + chr1_3:29703256-29703275 Msa0113690:intron 40.0%
TAGATAAGGGGCAGAATTCT+CGG - chr1_3:29703409-29703428 None:intergenic 40.0%
! GGACTTGGACATTTTCTATG+AGG - chr1_3:29703519-29703538 None:intergenic 40.0%
ACAATGAATTGTTGACCCTG+TGG - chr1_3:29703544-29703563 None:intergenic 40.0%
TTTCAAGCTGTAAGTCTGAG+AGG + chr1_3:29703613-29703632 Msa0113690:intron 40.0%
! CACGAAGGGTTTTCGATTAT+TGG + chr1_3:29703695-29703714 Msa0113690:intron 40.0%
GGAAAATACGAGTTTCACAC+CGG - chr1_3:29703812-29703831 None:intergenic 40.0%
CAGAATTAGCCAGACAGTTT+GGG + chr1_3:29703841-29703860 Msa0113690:intron 40.0%
CATGGCCATTAGAAAACTCA+CGG + chr1_3:29703931-29703950 Msa0113690:intron 40.0%
ATGGCCATTAGAAAACTCAC+GGG + chr1_3:29703932-29703951 Msa0113690:intron 40.0%
! TCGGTTCAGTTCGGTTTTTA+TGG - chr1_3:29704423-29704442 None:intergenic 40.0%
TGACGATACCTTTGCTTTGA+AGG + chr1_3:29704743-29704762 Msa0113690:intron 40.0%
CTTTACACTTTCATTCCACG+AGG - chr1_3:29705033-29705052 None:intergenic 40.0%
AATCTTCCAAACTAGGCATG+AGG + chr1_3:29705110-29705129 Msa0113690:intron 40.0%
GAGGAAGAAACATGATGTAC+AGG - chr1_3:29705169-29705188 None:intergenic 40.0%
CCTGTACTCAATTGCATTAG+AGG - chr1_3:29705188-29705207 None:intergenic 40.0%
CCTCTAATGCAATTGAGTAC+AGG + chr1_3:29705185-29705204 Msa0113690:intron 40.0%
ATTCATCCATGAAGACTTGG+TGG - chr1_3:29705234-29705253 None:intergenic 40.0%
AAGACGGTGCTTGTAAAGTT+TGG - chr1_3:29705425-29705444 None:intergenic 40.0%
TCAATGTAGACTATTACGGG+TGG + chr1_3:29705508-29705527 Msa0113690:intron 40.0%
ACTATTACGGGTGGAATAAC+TGG + chr1_3:29705517-29705536 Msa0113690:intron 40.0%
CTATTACGGGTGGAATAACT+GGG + chr1_3:29705518-29705537 Msa0113690:intron 40.0%
CTAGGAAACAAAAGGCTAGT+GGG - chr1_3:29705569-29705588 None:intergenic 40.0%
ACTAGGAAACAAAAGGCTAG+TGG - chr1_3:29705570-29705589 None:intergenic 40.0%
!! ACACTAAGCATGATTTGGTG+AGG + chr1_3:29705655-29705674 Msa0113690:intron 40.0%
!! CATGATTTGGTGAGGTTGTA+TGG + chr1_3:29705663-29705682 Msa0113690:intron 40.0%
TTGTATGGGATGTCGTGTTT+AGG + chr1_3:29705678-29705697 Msa0113690:intron 40.0%
!! AAGTGTTTTGGGTAGCATAG+GGG - chr1_3:29705845-29705864 None:intergenic 40.0%
!! CAAGTGTTTTGGGTAGCATA+GGG - chr1_3:29705846-29705865 None:intergenic 40.0%
!! ACAAGTGTTTTGGGTAGCAT+AGG - chr1_3:29705847-29705866 None:intergenic 40.0%
! CCCCCTATAACAAGTGTTTT+GGG - chr1_3:29705856-29705875 None:intergenic 40.0%
!! CCCAAAACACTTGTTATAGG+GGG + chr1_3:29705853-29705872 Msa0113690:intron 40.0%
! TCCCCCTATAACAAGTGTTT+TGG - chr1_3:29705857-29705876 None:intergenic 40.0%
AAGACAAATAAGGGCTCCAA+GGG - chr1_3:29705908-29705927 None:intergenic 40.0%
!! ATGTTGAAGGGCATTGCATT+TGG - chr1_3:29705937-29705956 None:intergenic 40.0%
ACAAGAGGGAACATGTTGAA+GGG - chr1_3:29705949-29705968 None:intergenic 40.0%
AACAAGAGGGAACATGTTGA+AGG - chr1_3:29705950-29705969 None:intergenic 40.0%
ACTACGCAAGGAGTTATGTT+TGG + chr1_3:29705999-29706018 Msa0113690:intron 40.0%
CTACGCAAGGAGTTATGTTT+GGG + chr1_3:29706000-29706019 Msa0113690:intron 40.0%
TTTGGGCCATGATAATACAC+AGG + chr1_3:29706017-29706036 Msa0113690:intron 40.0%
TTGGGCCATGATAATACACA+GGG + chr1_3:29706018-29706037 Msa0113690:intron 40.0%
CATGATAATACACAGGGCAA+CGG + chr1_3:29706024-29706043 Msa0113690:intron 40.0%
TTTCAAGAAGGTCAATACCG+TGG + chr1_3:29706117-29706136 Msa0113690:intron 40.0%
AATCTCCTTGCATGCGTTTA+TGG + chr1_3:29706273-29706292 Msa0113690:intron 40.0%
TCAACTCAGGTATGTGACTT+TGG + chr1_3:29706347-29706366 Msa0113690:intron 40.0%
! CTTTCATCTAAAACAGCTGC+TGG + chr1_3:29706398-29706417 Msa0113690:CDS 40.0%
! AAACGAACGCTTTTCAGTTG+AGG - chr1_3:29706440-29706459 None:intergenic 40.0%
TCTAAATCAGCCTGAATGGA+TGG + chr1_3:29706510-29706529 Msa0113690:intron 40.0%
! AGTTCACCTTTGATGACTTC+TGG - chr1_3:29706538-29706557 None:intergenic 40.0%
! TCAGCTTTGGTGTAATCTTG+TGG + chr1_3:29706581-29706600 Msa0113690:CDS 40.0%
! CAGCTTTGGTGTAATCTTGT+GGG + chr1_3:29706582-29706601 Msa0113690:CDS 40.0%
GAGGAACAATGTCTTTCTCA+TGG - chr1_3:29706705-29706724 None:intergenic 40.0%
ACTGTTAAAGAGTCCCACAT+CGG + chr1_3:29707014-29707033 Msa0113690:intron 40.0%
GACAATCTCTTATCCGATGT+GGG - chr1_3:29707030-29707049 None:intergenic 40.0%
AGACAATCTCTTATCCGATG+TGG - chr1_3:29707031-29707050 None:intergenic 40.0%
! GCATGAATATAAATGGTGGG+TGG - chr1_3:29707200-29707219 None:intergenic 40.0%
TGTGTTAAAGAGTCCCACAT+CGG + chr1_3:29707242-29707261 Msa0113690:intron 40.0%
!! TTCATGTGTTTGGTTCTGCA+TGG + chr1_3:29707486-29707505 Msa0113690:intron 40.0%
GGCAACCACATACTGTTTAT+TGG + chr1_3:29707622-29707641 Msa0113690:intron 40.0%
GTGGTCCAATAAACAGTATG+TGG - chr1_3:29707630-29707649 None:intergenic 40.0%
! TTGTGTCTTCCTTTTGTCCT+CGG - chr1_3:29707652-29707671 None:intergenic 40.0%
GATTACCACTGCTCAAATTC+AGG - chr1_3:29707678-29707697 None:intergenic 40.0%
CAGTAAGCATGAAAGGCTAA+AGG + chr1_3:29707730-29707749 Msa0113690:intron 40.0%
!!! TCCGGATGCATTTGTTTTGA+AGG + chr1_3:29707771-29707790 Msa0113690:intron 40.0%
GCCTTCAAAACAAATGCATC+CGG - chr1_3:29707775-29707794 None:intergenic 40.0%
TCCATTGTGATTCCAGTGAT+TGG + chr1_3:29707797-29707816 Msa0113690:intron 40.0%
CCATTGTGATTCCAGTGATT+GGG + chr1_3:29707798-29707817 Msa0113690:intron 40.0%
GATGTCGAAAGATGAGTTGT+TGG - chr1_3:29707883-29707902 None:intergenic 40.0%
GCGTCCAACTATCAAAAGAA+GGG - chr1_3:29707926-29707945 None:intergenic 40.0%
TGCGTCCAACTATCAAAAGA+AGG - chr1_3:29707927-29707946 None:intergenic 40.0%
!! TCTTTTGATAGTTGGACGCA+TGG + chr1_3:29707927-29707946 Msa0113690:intron 40.0%
GTAATGATCTATGCACAGAC+GGG - chr1_3:29708231-29708250 None:intergenic 40.0%
!!! TGTTGCAGCTGTTGGTTTTA+TGG + chr1_3:29708307-29708326 Msa0113690:CDS 40.0%
!!! GTTGCAGCTGTTGGTTTTAT+GGG + chr1_3:29708308-29708327 Msa0113690:CDS 40.0%
!!! CTGTTGGTTTTATGGGCAAA+AGG + chr1_3:29708315-29708334 Msa0113690:CDS 40.0%
ATAAGGTCTCATTGAGCCAA+TGG - chr1_3:29708499-29708518 None:intergenic 40.0%
ATAACTGGTTAGAGTCTCCT+TGG - chr1_3:29708575-29708594 None:intergenic 40.0%
TAACCAGTTATGCCAACCAT+TGG + chr1_3:29708584-29708603 Msa0113690:intron 40.0%
TTTCTTACTGTAGGGAACCA+AGG + chr1_3:29708686-29708705 Msa0113690:intron 40.0%
ACCATCCTAGCTATTTGTGA+AGG + chr1_3:29709276-29709295 Msa0113690:intron 40.0%
CCATCCTAGCTATTTGTGAA+GGG + chr1_3:29709277-29709296 Msa0113690:intron 40.0%
TTCCATATAAACACGCACTG+CGG - chr1_3:29709307-29709326 None:intergenic 40.0%
ATTGCAGATTGCGGAATAAC+AGG - chr1_3:29709342-29709361 None:intergenic 40.0%
ATCACTGAAAAACACAAGGG+TGG + chr1_3:29709427-29709446 Msa0113690:intron 40.0%
! TTAGGAGTTAGGCTTTGGTT+GGG - chr1_3:29709516-29709535 None:intergenic 40.0%
TATTGCTTGGCTTAGGAGTT+AGG - chr1_3:29709527-29709546 None:intergenic 40.0%
! TAGTTGGGGTACTTAATTGG+AGG - chr1_3:29709581-29709600 None:intergenic 40.0%
! ATTTTAAGCAAAACAGGGGG+TGG - chr1_3:29709645-29709664 None:intergenic 40.0%
! CTTGTTTCTCCTCGTCACAA+TGG - chr1_3:29693381-29693400 None:intergenic 45.0%
! CTACTTGCTCACCACCATTT+TGG - chr1_3:29693405-29693424 None:intergenic 45.0%
GGGAGTTAAGTTTGCGAAAG+AGG + chr1_3:29693446-29693465 Msa0113690:five_prime_UTR 45.0%
CTGAGATAGGAAATGTACGG+CGG + chr1_3:29693486-29693505 Msa0113690:exon 45.0%
CAAGAAGCGATTGGATTGAG+CGG - chr1_3:29693685-29693704 None:intergenic 45.0%
AGAAGAAGAAGGAGAAGGAG+AGG - chr1_3:29693724-29693743 None:intergenic 45.0%
ACCGGTGTGAAAGTGATTGA+GGG - chr1_3:29693761-29693780 None:intergenic 45.0%
AACCGGTGTGAAAGTGATTG+AGG - chr1_3:29693762-29693781 None:intergenic 45.0%
ATGCATCCATCCCGTGAATT+AGG - chr1_3:29694284-29694303 None:intergenic 45.0%
ACGGGATGGATGCATATACA+TGG + chr1_3:29694289-29694308 Msa0113690:CDS 45.0%
TTAGCAGTTCTCTCAAGGCA+GGG - chr1_3:29694431-29694450 None:intergenic 45.0%
CCTTGAGAGAACTGCTAACT+GGG + chr1_3:29694433-29694452 Msa0113690:CDS 45.0%
CTTGAGAGAACTGCTAACTG+GGG + chr1_3:29694434-29694453 Msa0113690:CDS 45.0%
AGGAAAATTTAGGTGTGCGC+TGG + chr1_3:29694641-29694660 Msa0113690:CDS 45.0%
AAATTTAGGTGTGCGCTGGA+AGG + chr1_3:29694645-29694664 Msa0113690:CDS 45.0%
GTGACCAGTCCATTAAACTC+CGG - chr1_3:29695349-29695368 None:intergenic 45.0%
GAAGCTGTGGGAGTTAGTAA+TGG + chr1_3:29695374-29695393 Msa0113690:intron 45.0%
TAGCAAGCGTGTAACTTCCA+TGG - chr1_3:29695466-29695485 None:intergenic 45.0%
ATGGAAGTTACACGCTTGCT+AGG + chr1_3:29695465-29695484 Msa0113690:intron 45.0%
CCATGTGTGCATCTCATAGT+GGG - chr1_3:29695494-29695513 None:intergenic 45.0%
ACCATGTGTGCATCTCATAG+TGG - chr1_3:29695495-29695514 None:intergenic 45.0%
TAATTGTGGGTGTGCACGAA+AGG + chr1_3:29695678-29695697 Msa0113690:intron 45.0%
AATTGTGGGTGTGCACGAAA+GGG + chr1_3:29695679-29695698 Msa0113690:intron 45.0%
TGGACAGTAGCACCAATTCT+TGG - chr1_3:29695761-29695780 None:intergenic 45.0%
AAGAGAGAATCTCTCCTCCA+AGG + chr1_3:29695945-29695964 Msa0113690:intron 45.0%
AGAGAGAATCTCTCCTCCAA+GGG + chr1_3:29695946-29695965 Msa0113690:intron 45.0%
AATTGTGAAGGGGAAACCCT+TGG - chr1_3:29695965-29695984 None:intergenic 45.0%
AGGCTAATGAGGAGCTAACT+AGG - chr1_3:29696014-29696033 None:intergenic 45.0%
GATTCAAGACTCAAGAGCCT+TGG + chr1_3:29696646-29696665 Msa0113690:intron 45.0%
! ATTAGAGTCGTTGATTGGGC+AGG - chr1_3:29696677-29696696 None:intergenic 45.0%
TTGATTTAGTAGGAAGGCCC+GGG + chr1_3:29696915-29696934 Msa0113690:CDS 45.0%
!! GTTTCAACTGGCTTGAACCT+TGG - chr1_3:29697010-29697029 None:intergenic 45.0%
AGGTGATGAAGACTGACAAG+GGG - chr1_3:29697238-29697257 None:intergenic 45.0%
CAGGTGATGAAGACTGACAA+GGG - chr1_3:29697239-29697258 None:intergenic 45.0%
CTTGTCAGTCTTCATCACCT+GGG + chr1_3:29697238-29697257 Msa0113690:intron 45.0%
! TTTCTGGTAACTGGGACCAA+CGG + chr1_3:29697625-29697644 Msa0113690:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_3:29697881-29697900 Msa0113690:intron 45.0%
GCTCGACCCAAAATTCTAAG+AGG - chr1_3:29697926-29697945 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_3:29697878-29697897 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_3:29697875-29697894 Msa0113690:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_3:29697881-29697900 Msa0113690:intron 45.0%
TCTAGATATCCACTCCTGGA+CGG - chr1_3:29698053-29698072 None:intergenic 45.0%
ACACTCTAGATATCCACTCC+TGG - chr1_3:29698057-29698076 None:intergenic 45.0%
GTTACCACTATTGGGTCACT+CGG - chr1_3:29698083-29698102 None:intergenic 45.0%
!! CACCAACAAGCCGATTTGAA+AGG - chr1_3:29698181-29698200 None:intergenic 45.0%
!! TTCAAATCGGCTTGTTGGTG+AGG + chr1_3:29698181-29698200 Msa0113690:intron 45.0%
ATGACCACAGACGCAATCAA+AGG - chr1_3:29698417-29698436 None:intergenic 45.0%
! GATTGCGTCTGTGGTCATTT+TGG + chr1_3:29698419-29698438 Msa0113690:intron 45.0%
ATGCAGCGTGATCCTTGATA+CGG + chr1_3:29698537-29698556 Msa0113690:intron 45.0%
!! CAGGAGGTACTGTTGATTGT+AGG + chr1_3:29698673-29698692 Msa0113690:intron 45.0%
GCTGTTGGGAACAACCATAT+AGG + chr1_3:29698741-29698760 Msa0113690:CDS 45.0%
! GTTTTCTGTCTTAATGGCGC+TGG + chr1_3:29698892-29698911 Msa0113690:intron 45.0%
GAGTCATGAAGTTGACCTTG+AGG + chr1_3:29699008-29699027 Msa0113690:CDS 45.0%
TCATGAAGTTGACCTTGAGG+AGG + chr1_3:29699011-29699030 Msa0113690:CDS 45.0%
TTGAAGGAGAACATTGGGAC+AGG + chr1_3:29699066-29699085 Msa0113690:CDS 45.0%
TTCACTCTTTCCCATGAGAG+AGG + chr1_3:29699607-29699626 Msa0113690:intron 45.0%
ATTCAGGCATCTCTTAGCAG+AGG - chr1_3:29699718-29699737 None:intergenic 45.0%
GACCAAGTGTTTATCAAGGC+AGG + chr1_3:29699999-29700018 Msa0113690:intron 45.0%
CTCCTGCCTTGATAAACACT+TGG - chr1_3:29700004-29700023 None:intergenic 45.0%
TACTTTGCATAAGAGGGGAG+GGG + chr1_3:29700104-29700123 Msa0113690:intron 45.0%
TCAAATTTATCTTGCGGGGC+AGG + chr1_3:29700181-29700200 Msa0113690:intron 45.0%
ACGTTACCTTTGCCATTGCT+TGG + chr1_3:29700253-29700272 Msa0113690:intron 45.0%
TCGCTATATGTCGATGTCCT+AGG + chr1_3:29700362-29700381 Msa0113690:intron 45.0%
CCATGGACATGCTTCTACTA+AGG - chr1_3:29700415-29700434 None:intergenic 45.0%
! CCTTAGTAGAAGCATGTCCA+TGG + chr1_3:29700412-29700431 Msa0113690:intron 45.0%
ATGAGGATTGCGATGGAAAG+AGG + chr1_3:29700598-29700617 Msa0113690:intron 45.0%
!! CGGGCTCTTTTGTTTCAAAC+GGG - chr1_3:29700726-29700745 None:intergenic 45.0%
!! CCGGGCTCTTTTGTTTCAAA+CGG - chr1_3:29700727-29700746 None:intergenic 45.0%
! CCGTTTGAAACAAAAGAGCC+CGG + chr1_3:29700724-29700743 Msa0113690:intron 45.0%
! CGTTTGAAACAAAAGAGCCC+GGG + chr1_3:29700725-29700744 Msa0113690:intron 45.0%
CATGGATGTGTAAGGCAATG+TGG + chr1_3:29700843-29700862 Msa0113690:intron 45.0%
CTCTAGGTGGATGATTTCCT+TGG + chr1_3:29701020-29701039 Msa0113690:intron 45.0%
TAGGTGGATGATTTCCTTGG+TGG + chr1_3:29701023-29701042 Msa0113690:intron 45.0%
TAACCTCAACCAACGCTGAA+AGG - chr1_3:29701286-29701305 None:intergenic 45.0%
!! TCAGCGTTGGTTGAGGTTAT+AGG + chr1_3:29701287-29701306 Msa0113690:intron 45.0%
!! CAGCGTTGGTTGAGGTTATA+GGG + chr1_3:29701288-29701307 Msa0113690:intron 45.0%
CTTCACAGCAACATCCTGAA+GGG - chr1_3:29701346-29701365 None:intergenic 45.0%
TCTTCACAGCAACATCCTGA+AGG - chr1_3:29701347-29701366 None:intergenic 45.0%
ATGGTCTCCTTGAATTGCAG+AGG + chr1_3:29701748-29701767 Msa0113690:intron 45.0%
CAAGCTTCCTCTGCAATTCA+AGG - chr1_3:29701758-29701777 None:intergenic 45.0%
TATGAACTTCTGCAGATGCC+AGG + chr1_3:29701778-29701797 Msa0113690:CDS 45.0%
GTGGGAAGAAGATGGATCAA+TGG - chr1_3:29702219-29702238 None:intergenic 45.0%
AGATGAAGGTGGGAAGAAGA+TGG - chr1_3:29702227-29702246 None:intergenic 45.0%
CAAAGGAAGGAGATGAAGGT+GGG - chr1_3:29702237-29702256 None:intergenic 45.0%
TCAAAGGAAGGAGATGAAGG+TGG - chr1_3:29702238-29702257 None:intergenic 45.0%
TCTAGGTGGAAAACTGGTCA+TGG - chr1_3:29702986-29703005 None:intergenic 45.0%
GAAGGGCGGAAATCTATTCA+TGG - chr1_3:29703080-29703099 None:intergenic 45.0%
AGCACTACTATTAGGAAGGG+CGG - chr1_3:29703094-29703113 None:intergenic 45.0%
AGGCTACTGGTGTAAATTGC+AGG - chr1_3:29703157-29703176 None:intergenic 45.0%
TCAACGAGATAGGGAAGCTT+GGG - chr1_3:29703184-29703203 None:intergenic 45.0%
GCCCAACAAAGGGTTATGAT+TGG - chr1_3:29703324-29703343 None:intergenic 45.0%
GAGAGAAGAAGCCCAACAAA+GGG - chr1_3:29703334-29703353 None:intergenic 45.0%
TGAGAGAAGAAGCCCAACAA+AGG - chr1_3:29703335-29703354 None:intergenic 45.0%
!! GTCTCACAAATAGTGGGCAA+AGG + chr1_3:29703376-29703395 Msa0113690:intron 45.0%
AGATAAGGGGCAGAATTCTC+GGG - chr1_3:29703408-29703427 None:intergenic 45.0%
! CGTGCTTTTGTCTTTCTTGC+AGG - chr1_3:29703446-29703465 None:intergenic 45.0%
!! GATTTCTAGAACCTGTAGGC+CGG + chr1_3:29703758-29703777 Msa0113690:intron 45.0%
TGGCTAATTCTGGATGGCAA+AGG - chr1_3:29703833-29703852 None:intergenic 45.0%
ACTGTCTGGCTAATTCTGGA+TGG - chr1_3:29703839-29703858 None:intergenic 45.0%
CCAAACTGTCTGGCTAATTC+TGG - chr1_3:29703843-29703862 None:intergenic 45.0%
CCAGAATTAGCCAGACAGTT+TGG + chr1_3:29703840-29703859 Msa0113690:intron 45.0%
TGGCCATTAGAAAACTCACG+GGG + chr1_3:29703933-29703952 Msa0113690:intron 45.0%
! AACCCCCGTGAGTTTTCTAA+TGG - chr1_3:29703939-29703958 None:intergenic 45.0%
! TCATTCTAGGAGGATGGTGA+CGG - chr1_3:29703963-29703982 None:intergenic 45.0%
GCGACACATCATACATACCA+GGG - chr1_3:29704036-29704055 None:intergenic 45.0%
TGGTATGTATGATGTGTCGC+CGG + chr1_3:29704036-29704055 Msa0113690:intron 45.0%
AACATGGTATCAGCAGCTCT+AGG - chr1_3:29704226-29704245 None:intergenic 45.0%
!! TCTGGTTCGGTTTGGTTCAT+AGG - chr1_3:29704547-29704566 None:intergenic 45.0%
!!! TGTTTTGGTCTGGTTCGGTT+TGG - chr1_3:29704555-29704574 None:intergenic 45.0%
CGTCGTGAATCTTCCAAACT+AGG + chr1_3:29705103-29705122 Msa0113690:intron 45.0%
CTTCTTCCACCAAGTCTTCA+TGG + chr1_3:29705225-29705244 Msa0113690:intron 45.0%
! TAAGGGTACACGGTAACTTG+TGG - chr1_3:29705282-29705301 None:intergenic 45.0%
! GTTTGCTGCATAAGGGTACA+CGG - chr1_3:29705292-29705311 None:intergenic 45.0%
TGTCAAGTCTTGAGCGTGAT+GGG - chr1_3:29705485-29705504 None:intergenic 45.0%
ATGTCAAGTCTTGAGCGTGA+TGG - chr1_3:29705486-29705505 None:intergenic 45.0%
CATAGGGGGATTGTTTCACT+TGG - chr1_3:29705830-29705849 None:intergenic 45.0%
!! AGTGTTTTGGGTAGCATAGG+GGG - chr1_3:29705844-29705863 None:intergenic 45.0%
AGACAAATAAGGGCTCCAAG+GGG - chr1_3:29705907-29705926 None:intergenic 45.0%
GAAGACAAATAAGGGCTCCA+AGG - chr1_3:29705909-29705928 None:intergenic 45.0%
TTCCCTCTTGTTCTACCTGT+TGG + chr1_3:29705958-29705977 Msa0113690:intron 45.0%
AGCCAACAGGTAGAACAAGA+GGG - chr1_3:29705963-29705982 None:intergenic 45.0%
AAGCCAACAGGTAGAACAAG+AGG - chr1_3:29705964-29705983 None:intergenic 45.0%
!! CTTGTTCTACCTGTTGGCTT+CGG + chr1_3:29705964-29705983 Msa0113690:intron 45.0%
ATAGCTGACACAACTACGCA+AGG + chr1_3:29705987-29706006 Msa0113690:intron 45.0%
CGTTGCCCTGTGTATTATCA+TGG - chr1_3:29706026-29706045 None:intergenic 45.0%
GCATGCAAGGAGATTGTACA+AGG - chr1_3:29706268-29706287 None:intergenic 45.0%
! CTTTGGCCTTTCACGTACAA+AGG + chr1_3:29706364-29706383 Msa0113690:CDS 45.0%
ATGGCACCAGAAGTCATCAA+AGG + chr1_3:29706529-29706548 Msa0113690:CDS 45.0%
TGGTGTAATCTTGTGGGAAC+TGG + chr1_3:29706588-29706607 Msa0113690:CDS 45.0%
GAAGGATTTAACTGCCTCCA+TGG - chr1_3:29706628-29706647 None:intergenic 45.0%
GAGGCAGTTAAATCCTTCAC+AGG + chr1_3:29706630-29706649 Msa0113690:CDS 45.0%
TGCTATCAGGTTTCCGCTAT+CGG + chr1_3:29707173-29707192 Msa0113690:intron 45.0%
TCATGTGGAGGGGGTTATAT+TGG - chr1_3:29707301-29707320 None:intergenic 45.0%
ATATAACCCCCTCCACATGA+AGG + chr1_3:29707301-29707320 Msa0113690:intron 45.0%
! AAGGAGGGTGTGATACTAAG+AGG + chr1_3:29707320-29707339 Msa0113690:intron 45.0%
! AGGAGGGTGTGATACTAAGA+GGG + chr1_3:29707321-29707340 Msa0113690:intron 45.0%
GTTCTACATGTACCAGCTCA+GGG - chr1_3:29707419-29707438 None:intergenic 45.0%
TGTTCTACATGTACCAGCTC+AGG - chr1_3:29707420-29707439 None:intergenic 45.0%
CACGTAGAAAATCTCAGGAG+TGG + chr1_3:29707556-29707575 Msa0113690:intron 45.0%
CAAGCAGAGAAGCTGAACAT+AGG - chr1_3:29707598-29707617 None:intergenic 45.0%
TTCAGCTTCTCTGCTTGACT+GGG + chr1_3:29707601-29707620 Msa0113690:intron 45.0%
TACTGTTTATTGGACCACCG+AGG + chr1_3:29707632-29707651 Msa0113690:intron 45.0%
AAGCACCTGAATTTGAGCAG+TGG + chr1_3:29707670-29707689 Msa0113690:intron 45.0%
GCAGTGGTAATCACTCATCA+TGG + chr1_3:29707686-29707705 Msa0113690:intron 45.0%
CCCAATCACTGGAATCACAA+TGG - chr1_3:29707801-29707820 None:intergenic 45.0%
CCAAATCTTGTCCCAATCAC+TGG - chr1_3:29707812-29707831 None:intergenic 45.0%
CCAGTGATTGGGACAAGATT+TGG + chr1_3:29707809-29707828 Msa0113690:intron 45.0%
ACAAGATTTGGCACACTCTG+TGG + chr1_3:29707821-29707840 Msa0113690:intron 45.0%
TGAGAAAGGAGCTCAAACAG+AGG - chr1_3:29708204-29708223 None:intergenic 45.0%
GCAAAAGGCTAGAAATTCCG+AGG + chr1_3:29708330-29708349 Msa0113690:CDS 45.0%
ACTTGAGGATTCACATGCCT+CGG - chr1_3:29708350-29708369 None:intergenic 45.0%
TCAATTAAGGCAGCCACTTG+AGG - chr1_3:29708365-29708384 None:intergenic 45.0%
AGACCAGCAGAGCTCAATTA+AGG - chr1_3:29708378-29708397 None:intergenic 45.0%
TAACTCATCAACGATGGCTG+TGG + chr1_3:29708533-29708552 Msa0113690:intron 45.0%
! TTCCCAGCTCTTGTTCCTTT+TGG + chr1_3:29709077-29709096 Msa0113690:intron 45.0%
! TCCCAGCTCTTGTTCCTTTT+GGG + chr1_3:29709078-29709097 Msa0113690:intron 45.0%
ACCCAAAAGGAACAAGAGCT+GGG - chr1_3:29709082-29709101 None:intergenic 45.0%
CCAGCTGTCAATTTCCGTTT+GGG - chr1_3:29709142-29709161 None:intergenic 45.0%
TCCAGCTGTCAATTTCCGTT+TGG - chr1_3:29709143-29709162 None:intergenic 45.0%
ACAGCTGGAATAGTTAACCC+AGG + chr1_3:29709154-29709173 Msa0113690:intron 45.0%
GGCTGCCCATTTAACAACAA+TGG - chr1_3:29709225-29709244 None:intergenic 45.0%
TGTTGTTAAATGGGCAGCCA+TGG + chr1_3:29709226-29709245 Msa0113690:intron 45.0%
CCCTTCACAAATAGCTAGGA+TGG - chr1_3:29709280-29709299 None:intergenic 45.0%
GCATCCCTTCACAAATAGCT+AGG - chr1_3:29709284-29709303 None:intergenic 45.0%
TCCATATAAACACGCACTGC+GGG - chr1_3:29709306-29709325 None:intergenic 45.0%
! GGCTTTGGTTGGGAATTAAG+AGG - chr1_3:29709506-29709525 None:intergenic 45.0%
! CTTAGGAGTTAGGCTTTGGT+TGG - chr1_3:29709517-29709536 None:intergenic 45.0%
TTGGCTTAGGAGTTAGGCTT+TGG - chr1_3:29709521-29709540 None:intergenic 45.0%
GAAGAGCTGAATTACTCTGC+TGG + chr1_3:29709757-29709776 Msa0113690:three_prime_UTR 45.0%
!!! TTTTGTATTTTTATTATATT+TGG - chr1_3:29695648-29695667 None:intergenic 5.0%
!!! TTTTAAATAAATTAATTATC+GGG + chr1_3:29697139-29697158 Msa0113690:intron 5.0%
!!! AAATAATTTAGAATATATAA+AGG + chr1_3:29698572-29698591 Msa0113690:intron 5.0%
!!! ATTATTATTTTTTTTTTGAA+TGG - chr1_3:29700924-29700943 None:intergenic 5.0%
AGATAGGAAATGTACGGCGG+TGG + chr1_3:29693489-29693508 Msa0113690:exon 50.0%
CGCTCAATCCAATCGCTTCT+TGG + chr1_3:29693683-29693702 Msa0113690:CDS 50.0%
AGAAGAAGGAGAAGGAGAGG+AGG - chr1_3:29693721-29693740 None:intergenic 50.0%
CCGGTGTGAAAGTGATTGAG+GGG - chr1_3:29693760-29693779 None:intergenic 50.0%
CCCCTCAATCACTTTCACAC+CGG + chr1_3:29693757-29693776 Msa0113690:CDS 50.0%
GTTAGCAGTTCTCTCAAGGC+AGG - chr1_3:29694432-29694451 None:intergenic 50.0%
GCCTTGAGAGAACTGCTAAC+TGG + chr1_3:29694432-29694451 Msa0113690:CDS 50.0%
CCCAGTTAGCAGTTCTCTCA+AGG - chr1_3:29694436-29694455 None:intergenic 50.0%
CCAACGGGTAAGCTTCCAAT+TGG - chr1_3:29694715-29694734 None:intergenic 50.0%
CCAATTGGAAGCTTACCCGT+TGG + chr1_3:29694712-29694731 Msa0113690:CDS 50.0%
TCGATGGACACAAAGGCCAA+CGG - chr1_3:29694731-29694750 None:intergenic 50.0%
GCAATGCTCGATGGACACAA+AGG - chr1_3:29694738-29694757 None:intergenic 50.0%
CTACCGTGTCGAATCGCTAA+GGG + chr1_3:29695063-29695082 Msa0113690:CDS 50.0%
CATCCCTTAGCGATTCGACA+CGG - chr1_3:29695069-29695088 None:intergenic 50.0%
TTTGCGACTTTGTGTGTGGG+TGG + chr1_3:29695198-29695217 Msa0113690:intron 50.0%
TTGCGACTTTGTGTGTGGGT+GGG + chr1_3:29695199-29695218 Msa0113690:intron 50.0%
TGGTCACACTGTGAAGCTGT+GGG + chr1_3:29695362-29695381 Msa0113690:intron 50.0%
AAGCGTGTAACTTCCATGGC+AGG - chr1_3:29695462-29695481 None:intergenic 50.0%
CCCACTATGAGATGCACACA+TGG + chr1_3:29695491-29695510 Msa0113690:intron 50.0%
TCTACAAGACCGGTGACAGA+AGG + chr1_3:29696253-29696272 Msa0113690:intron 50.0%
TGATTTAGTAGGAAGGCCCG+GGG + chr1_3:29696916-29696935 Msa0113690:CDS 50.0%
!! ATCAGGTTGGCATGTATCCC+CGG - chr1_3:29696936-29696955 None:intergenic 50.0%
! CTTGTGTTTGAGACCACGTC+AGG + chr1_3:29697088-29697107 Msa0113690:CDS 50.0%
GCAAAGGAAACAACCTGACG+TGG - chr1_3:29697104-29697123 None:intergenic 50.0%
! GGTTGTTTCCTTTGCCCTTC+TGG + chr1_3:29697109-29697128 Msa0113690:intron 50.0%
!! AAAGGCATCCAGAAGGGCAA+AGG - chr1_3:29697120-29697139 None:intergenic 50.0%
CCAGGTGATGAAGACTGACA+AGG - chr1_3:29697240-29697259 None:intergenic 50.0%
CCTTGTCAGTCTTCATCACC+TGG + chr1_3:29697237-29697256 Msa0113690:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_3:29697880-29697899 Msa0113690:intron 50.0%
GAAACCCTCACCTTACAAGC+CGG - chr1_3:29697888-29697907 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_3:29697880-29697899 Msa0113690:intron 50.0%
TGATCCGAGTGACCCAATAG+TGG + chr1_3:29698076-29698095 Msa0113690:intron 50.0%
AGTGGTAACCTGATAGCACG+TGG + chr1_3:29698094-29698113 Msa0113690:intron 50.0%
CGTGATCCTTGATACGGCAT+AGG + chr1_3:29698543-29698562 Msa0113690:intron 50.0%
ATGCCATCTCGTTTAGGTCC+TGG + chr1_3:29698931-29698950 Msa0113690:intron 50.0%
GTACCAGGACCTAAACGAGA+TGG - chr1_3:29698937-29698956 None:intergenic 50.0%
TGAAGTTGACCTTGAGGAGG+AGG + chr1_3:29699014-29699033 Msa0113690:CDS 50.0%
GAACTGTACTTCGTGCGGAT+TGG + chr1_3:29699227-29699246 Msa0113690:CDS 50.0%
TTACTCTACCCTCCCCTCAT+AGG - chr1_3:29700144-29700163 None:intergenic 50.0%
!! ACACTTGCTTCAAGTTGCCC+GGG - chr1_3:29700745-29700764 None:intergenic 50.0%
!! GACACTTGCTTCAAGTTGCC+CGG - chr1_3:29700746-29700765 None:intergenic 50.0%
GTATTTGGGAGAGGATGTCC+AGG + chr1_3:29701122-29701141 Msa0113690:intron 50.0%
TTGTGCTGTCCTTTCAGCGT+TGG + chr1_3:29701274-29701293 Msa0113690:intron 50.0%
!! TGTCCTTTCAGCGTTGGTTG+AGG + chr1_3:29701280-29701299 Msa0113690:intron 50.0%
TTCAGATTGAGGCCAGGGAA+TGG + chr1_3:29701471-29701490 Msa0113690:intron 50.0%
CTGATTGAGGAACCAACACC+TGG - chr1_3:29701799-29701818 None:intergenic 50.0%
! ACGACGCTTCTCACTGATTG+AGG - chr1_3:29701812-29701831 None:intergenic 50.0%
GAGAGTTAAATGGGCATGGG+TGG + chr1_3:29702400-29702419 Msa0113690:intron 50.0%
AGGTGGAAAACTGGTCATGG+AGG - chr1_3:29702983-29703002 None:intergenic 50.0%
AAGCTTGGGTGTAAGGCTAC+TGG - chr1_3:29703170-29703189 None:intergenic 50.0%
GATAGGGAAGCTTGGGTGTA+AGG - chr1_3:29703177-29703196 None:intergenic 50.0%
CTCAACGAGATAGGGAAGCT+TGG - chr1_3:29703185-29703204 None:intergenic 50.0%
CTCTCAGTAGTTCGTACCTC+TGG + chr1_3:29703349-29703368 Msa0113690:intron 50.0%
AAATGTCCAAGTCCTGCCAC+AGG + chr1_3:29703525-29703544 Msa0113690:intron 50.0%
AATGTCCAAGTCCTGCCACA+GGG + chr1_3:29703526-29703545 Msa0113690:intron 50.0%
TGAATTGTTGACCCTGTGGC+AGG - chr1_3:29703540-29703559 None:intergenic 50.0%
! GCAACAGTAAAGAGGGTGCA+GGG - chr1_3:29703582-29703601 None:intergenic 50.0%
! TGCAACAGTAAAGAGGGTGC+AGG - chr1_3:29703583-29703602 None:intergenic 50.0%
TCCTGTAGGCAGAAACACGA+AGG + chr1_3:29703680-29703699 Msa0113690:intron 50.0%
CCTGTAGGCAGAAACACGAA+GGG + chr1_3:29703681-29703700 Msa0113690:intron 50.0%
AGTTGTTCCTCAACCTCCAG+AGG - chr1_3:29703789-29703808 None:intergenic 50.0%
TGGAGGTTGAGGAACAACTC+CGG + chr1_3:29703790-29703809 Msa0113690:intron 50.0%
TGGAATGGTCCCAAACTGTC+TGG - chr1_3:29703853-29703872 None:intergenic 50.0%
GTCAACACCCAGTGACTCAA+TGG - chr1_3:29703887-29703906 None:intergenic 50.0%
GGCCATTAGAAAACTCACGG+GGG + chr1_3:29703934-29703953 Msa0113690:intron 50.0%
GGCGACACATCATACATACC+AGG - chr1_3:29704037-29704056 None:intergenic 50.0%
GGTATGTATGATGTGTCGCC+GGG + chr1_3:29704037-29704056 Msa0113690:intron 50.0%
CATCTGATCACCGTGACTGA+AGG - chr1_3:29704129-29704148 None:intergenic 50.0%
GGTGATCAGATGAGCTGATG+CGG + chr1_3:29704137-29704156 Msa0113690:intron 50.0%
GTGATCAGATGAGCTGATGC+GGG + chr1_3:29704138-29704157 Msa0113690:intron 50.0%
CATGCCACCAACTAGTTAGG+CGG + chr1_3:29704161-29704180 Msa0113690:intron 50.0%
TCATGAGCCGCCTAACTAGT+TGG - chr1_3:29704171-29704190 None:intergenic 50.0%
ACTAGTTAGGCGGCTCATGA+AGG + chr1_3:29704171-29704190 Msa0113690:intron 50.0%
CTAGTTAGGCGGCTCATGAA+GGG + chr1_3:29704172-29704191 Msa0113690:intron 50.0%
CTGATCTCAATAAGGGTGGG+CGG + chr1_3:29704388-29704407 Msa0113690:intron 50.0%
GAAGGATCTTGGAAGGCTGA+AGG - chr1_3:29704911-29704930 None:intergenic 50.0%
CAGTCTCCTCATGCCTAGTT+TGG - chr1_3:29705119-29705138 None:intergenic 50.0%
GTCAAGTCTTGAGCGTGATG+GGG - chr1_3:29705484-29705503 None:intergenic 50.0%
! AAAAGGCTAGTGGGTGCATG+TGG - chr1_3:29705560-29705579 None:intergenic 50.0%
CAAGAAGGTCAATACCGTGG+TGG + chr1_3:29706120-29706139 Msa0113690:intron 50.0%
AGTATTTGGGTGAGCCACCA+CGG - chr1_3:29706137-29706156 None:intergenic 50.0%
!! ACTTCTGGTGCCATCCATTC+AGG - chr1_3:29706523-29706542 None:intergenic 50.0%
TGGTGACCCTTCAACAACCA+TGG + chr1_3:29706608-29706627 Msa0113690:CDS 50.0%
TGACCCTTCAACAACCATGG+AGG + chr1_3:29706611-29706630 Msa0113690:CDS 50.0%
CTGCCTCCATGGTTGTTGAA+GGG - chr1_3:29706617-29706636 None:intergenic 50.0%
ACTGCCTCCATGGTTGTTGA+AGG - chr1_3:29706618-29706637 None:intergenic 50.0%
GCAATCTTCACCTCAGAAGC+CGG + chr1_3:29707073-29707092 Msa0113690:intron 50.0%
!! ACCTCAGAAGCCGGTTTTGT+GGG + chr1_3:29707082-29707101 Msa0113690:intron 50.0%
CCAACACAACCCCACAAAAC+CGG - chr1_3:29707095-29707114 None:intergenic 50.0%
!! GATAGCGGAAACCTGATAGC+AGG - chr1_3:29707174-29707193 None:intergenic 50.0%
GCTATCAGGTTTCCGCTATC+GGG + chr1_3:29707174-29707193 Msa0113690:intron 50.0%
ATGCTCCAGATGTCCAGTTC+TGG + chr1_3:29707216-29707235 Msa0113690:intron 50.0%
TGCTCCAGATGTCCAGTTCT+GGG + chr1_3:29707217-29707236 Msa0113690:intron 50.0%
CTTTAACACACGCCCAGAAC+TGG - chr1_3:29707232-29707251 None:intergenic 50.0%
GTATCACACCCTCCTTCATG+TGG - chr1_3:29707316-29707335 None:intergenic 50.0%
CAGGAATCCTAGTAGGAGAG+AGG + chr1_3:29707374-29707393 Msa0113690:intron 50.0%
!! TTTGGTTCTGCATGGAGCAC+AGG + chr1_3:29707494-29707513 Msa0113690:intron 50.0%
!! TTGGTTCTGCATGGAGCACA+GGG + chr1_3:29707495-29707514 Msa0113690:intron 50.0%
AGGAGTGGCATGAACAAGAG+AGG + chr1_3:29707571-29707590 Msa0113690:intron 50.0%
GTTCAGCTTCTCTGCTTGAC+TGG + chr1_3:29707600-29707619 Msa0113690:intron 50.0%
ATTGGACCACCGAGGACAAA+AGG + chr1_3:29707640-29707659 Msa0113690:intron 50.0%
! TGTCTTCCTTTTGTCCTCGG+TGG - chr1_3:29707649-29707668 None:intergenic 50.0%
CTGCGAGCAATATGAGAGTC+CGG + chr1_3:29707753-29707772 Msa0113690:intron 50.0%
GTGTAGGTTGTTGCAGCTGT+TGG + chr1_3:29708299-29708318 Msa0113690:intron 50.0%
GAGGCATGTGAATCCTCAAG+TGG + chr1_3:29708349-29708368 Msa0113690:CDS 50.0%
CTGCCTTAATTGAGCTCTGC+TGG + chr1_3:29708372-29708391 Msa0113690:CDS 50.0%
TCATCAACGATGGCTGTGGT+GGG + chr1_3:29708537-29708556 Msa0113690:intron 50.0%
GTGGGATTCAAATCCCACCA+AGG + chr1_3:29708555-29708574 Msa0113690:intron 50.0%
CTGGTTAGAGTCTCCTTGGT+GGG - chr1_3:29708571-29708590 None:intergenic 50.0%
ACTGGTTAGAGTCTCCTTGG+TGG - chr1_3:29708572-29708591 None:intergenic 50.0%
TGGCCAATGGTTGGCATAAC+TGG - chr1_3:29708590-29708609 None:intergenic 50.0%
CTTACTGTAGGGAACCAAGG+AGG + chr1_3:29708689-29708708 Msa0113690:intron 50.0%
GACCCAAAAGGAACAAGAGC+TGG - chr1_3:29709083-29709102 None:intergenic 50.0%
CCCAAACGGAAATTGACAGC+TGG + chr1_3:29709139-29709158 Msa0113690:intron 50.0%
TGTTAAATGGGCAGCCATGG+CGG + chr1_3:29709229-29709248 Msa0113690:intron 50.0%
GCAGATTGCGGAATAACAGG+TGG - chr1_3:29709339-29709358 None:intergenic 50.0%
GAAGGAGAAGGAGAGGAGGT+AGG - chr1_3:29693717-29693736 None:intergenic 55.0%
CGATGGACACAAAGGCCAAC+GGG - chr1_3:29694730-29694749 None:intergenic 55.0%
CCTTAGCGATTCGACACGGT+AGG - chr1_3:29695065-29695084 None:intergenic 55.0%
CCTACCGTGTCGAATCGCTA+AGG + chr1_3:29695062-29695081 Msa0113690:CDS 55.0%
GACTTTGTGTGTGGGTGGGT+GGG + chr1_3:29695203-29695222 Msa0113690:intron 55.0%
ACTTTGTGTGTGGGTGGGTG+GGG + chr1_3:29695204-29695223 Msa0113690:intron 55.0%
CTGGTCACACTGTGAAGCTG+TGG + chr1_3:29695361-29695380 Msa0113690:intron 55.0%
TTTGCCAGACAGACCTGCCA+TGG + chr1_3:29695446-29695465 Msa0113690:intron 55.0%
ACTTCCATGGCAGGTCTGTC+TGG - chr1_3:29695453-29695472 None:intergenic 55.0%
TGTGAAGGGGAAACCCTTGG+AGG - chr1_3:29695962-29695981 None:intergenic 55.0%
TGATTGGGCAGGAGAGACCA+AGG - chr1_3:29696666-29696685 None:intergenic 55.0%
!! TCAGGTTGGCATGTATCCCC+GGG - chr1_3:29696935-29696954 None:intergenic 55.0%
! TTTTAACACCCCCACCGTCC+AGG + chr1_3:29698036-29698055 Msa0113690:intron 55.0%
ATATCCACTCCTGGACGGTG+GGG - chr1_3:29698048-29698067 None:intergenic 55.0%
GATATCCACTCCTGGACGGT+GGG - chr1_3:29698049-29698068 None:intergenic 55.0%
AGATATCCACTCCTGGACGG+TGG - chr1_3:29698050-29698069 None:intergenic 55.0%
CCTGATAGCACGTGGCACAA+CGG + chr1_3:29698102-29698121 Msa0113690:intron 55.0%
TCGTTTAGGTCCTGGTACCG+AGG + chr1_3:29698939-29698958 Msa0113690:intron 55.0%
GACACATGTTCCTCGGTACC+AGG - chr1_3:29698952-29698971 None:intergenic 55.0%
TGACCTTGAGGAGGAGGATC+TGG + chr1_3:29699020-29699039 Msa0113690:CDS 55.0%
TGTCCAGATCCTCCTCCTCA+AGG - chr1_3:29699026-29699045 None:intergenic 55.0%
AGGAGGATCTGGACATTCCG+TGG + chr1_3:29699031-29699050 Msa0113690:CDS 55.0%
CTTCTGCAGATGCCAGGTGT+TGG + chr1_3:29701784-29701803 Msa0113690:CDS 55.0%
GGGCATGGGTGGAAGAAGAT+CGG + chr1_3:29702411-29702430 Msa0113690:intron 55.0%
! CCCTTCGTGTTTCTGCCTAC+AGG - chr1_3:29703684-29703703 None:intergenic 55.0%
GTTCCTCAACCTCCAGAGGT+GGG - chr1_3:29703785-29703804 None:intergenic 55.0%
TGTTCCTCAACCTCCAGAGG+TGG - chr1_3:29703786-29703805 None:intergenic 55.0%
CAGATTCGACGGTGGCTACA+GGG - chr1_3:29704004-29704023 None:intergenic 55.0%
CATCATACATACCAGGGCGC+AGG - chr1_3:29704030-29704049 None:intergenic 55.0%
GTGACTGAAGGAAGCCCCAA+CGG - chr1_3:29704117-29704136 None:intergenic 55.0%
GTTGGGGCTTCCTTCAGTCA+CGG + chr1_3:29704116-29704135 Msa0113690:intron 55.0%
GGGCATGCCACCAACTAGTT+AGG + chr1_3:29704158-29704177 Msa0113690:intron 55.0%
TGAGCCGCCTAACTAGTTGG+TGG - chr1_3:29704168-29704187 None:intergenic 55.0%
GGCTCATGAAGGGAGAGAGT+TGG + chr1_3:29704182-29704201 Msa0113690:intron 55.0%
CTCAATAAGGGTGGGCGGTT+CGG + chr1_3:29704393-29704412 Msa0113690:intron 55.0%
GTCAGCTATCCGAAGCCAAC+AGG - chr1_3:29705976-29705995 None:intergenic 55.0%
!! CACCTCAGAAGCCGGTTTTG+TGG + chr1_3:29707081-29707100 Msa0113690:intron 55.0%
!! CCTCAGAAGCCGGTTTTGTG+GGG + chr1_3:29707083-29707102 Msa0113690:intron 55.0%
!! CCGGTTTTGTGGGGTTGTGT+TGG + chr1_3:29707092-29707111 Msa0113690:intron 55.0%
AGCCTCCTCCAAAATCCGCT+GGG + chr1_3:29707145-29707164 Msa0113690:intron 55.0%
AGCGGAAACCTGATAGCAGG+TGG - chr1_3:29707171-29707190 None:intergenic 55.0%
TAACCCCCTCCACATGAAGG+AGG + chr1_3:29707304-29707323 Msa0113690:intron 55.0%
AACCCCCTCCACATGAAGGA+GGG + chr1_3:29707305-29707324 Msa0113690:intron 55.0%
ACACCCTCCTTCATGTGGAG+GGG - chr1_3:29707311-29707330 None:intergenic 55.0%
CACACCCTCCTTCATGTGGA+GGG - chr1_3:29707312-29707331 None:intergenic 55.0%
TCACACCCTCCTTCATGTGG+AGG - chr1_3:29707313-29707332 None:intergenic 55.0%
CTTGGGACCTCTCTCCTACT+AGG - chr1_3:29707384-29707403 None:intergenic 55.0%
GAGGTCCCAAGTGAGACACA+TGG + chr1_3:29707393-29707412 Msa0113690:intron 55.0%
CAGGGCCATGTGTCTCACTT+GGG - chr1_3:29707401-29707420 None:intergenic 55.0%
TCAGGGCCATGTGTCTCACT+TGG - chr1_3:29707402-29707421 None:intergenic 55.0%
!! CACAGACGGGCTAGTGAGAA+AGG - chr1_3:29708218-29708237 None:intergenic 55.0%
CTCATCAACGATGGCTGTGG+TGG + chr1_3:29708536-29708555 Msa0113690:intron 55.0%
ACTGTAGGGAACCAAGGAGG+CGG + chr1_3:29708692-29708711 Msa0113690:intron 55.0%
TCTGTCACTCCATTCCGCCA+TGG - chr1_3:29709246-29709265 None:intergenic 55.0%
GCCCGCAGTGCGTGTTTATA+TGG + chr1_3:29709302-29709321 Msa0113690:intron 55.0%
TAGGGGAGGATCTTCCGACG+AGG + chr1_3:29694621-29694640 Msa0113690:intron 60.0%
CGACTTTGTGTGTGGGTGGG+TGG + chr1_3:29695202-29695221 Msa0113690:intron 60.0%
GGAGCCCTCACCTTACAAGC+CGG - chr1_3:29697968-29697987 None:intergenic 60.0%
TATCCACTCCTGGACGGTGG+GGG - chr1_3:29698047-29698066 None:intergenic 60.0%
CCGTTGTGCCACGTGCTATC+AGG - chr1_3:29698105-29698124 None:intergenic 60.0%
!! GTACTTCGTGCGGATTGGCG+TGG + chr1_3:29699232-29699251 Msa0113690:CDS 60.0%
GTTGACCCTGTGGCAGGACT+TGG - chr1_3:29703534-29703553 None:intergenic 60.0%
TCAACCTCCAGAGGTGGGTC+CGG - chr1_3:29703780-29703799 None:intergenic 60.0%
GCAGATTCGACGGTGGCTAC+AGG - chr1_3:29704005-29704024 None:intergenic 60.0%
CATACATACCAGGGCGCAGG+TGG - chr1_3:29704027-29704046 None:intergenic 60.0%
AACACCAGACCCGACACAGG+AGG - chr1_3:29704067-29704086 None:intergenic 60.0%
TCCTGTGTCGGGTCTGGTGT+TGG + chr1_3:29704066-29704085 Msa0113690:intron 60.0%
ACCAACACCAGACCCGACAC+AGG - chr1_3:29704070-29704089 None:intergenic 60.0%
! CGGTGGTGTAGGAGGCACAT+AGG - chr1_3:29704097-29704116 None:intergenic 60.0%
TGTGCCTCCTACACCACCGT+TGG + chr1_3:29704098-29704117 Msa0113690:intron 60.0%
GTGCCTCCTACACCACCGTT+GGG + chr1_3:29704099-29704118 Msa0113690:intron 60.0%
TGCCTCCTACACCACCGTTG+GGG + chr1_3:29704100-29704119 Msa0113690:intron 60.0%
ACTGAAGGAAGCCCCAACGG+TGG - chr1_3:29704114-29704133 None:intergenic 60.0%
! CCCCACAAAACCGGCTTCTG+AGG - chr1_3:29707086-29707105 None:intergenic 60.0%
GAGCCTCCTCCAAAATCCGC+TGG + chr1_3:29707144-29707163 Msa0113690:intron 60.0%
!! AATGGTGGGTGGCCCGATAG+CGG - chr1_3:29707189-29707208 None:intergenic 60.0%
CACGCCCAGAACTGGACATC+TGG - chr1_3:29707224-29707243 None:intergenic 60.0%
CACCCTCCTTCATGTGGAGG+GGG - chr1_3:29707310-29707329 None:intergenic 60.0%
TGAGACACATGGCCCTGAGC+TGG + chr1_3:29707404-29707423 Msa0113690:intron 60.0%
GAGAAAGAAGGCCGCCTCCT+TGG - chr1_3:29708706-29708725 None:intergenic 60.0%
! AATGGGCAGCCATGGCGGAA+TGG + chr1_3:29709234-29709253 Msa0113690:intron 60.0%
TTGTGTGTGGGTGGGTGGGG+TGG + chr1_3:29695207-29695226 Msa0113690:intron 65.0%
TGTGTGTGGGTGGGTGGGGT+GGG + chr1_3:29695208-29695227 Msa0113690:intron 65.0%
! GGACCCACCTCTGGAGGTTG+AGG + chr1_3:29703779-29703798 Msa0113690:intron 65.0%
TTCGACGGTGGCTACAGGGC+AGG - chr1_3:29704000-29704019 None:intergenic 65.0%
GCAGGTGGCAGATTCGACGG+TGG - chr1_3:29704012-29704031 None:intergenic 65.0%
GGCGCAGGTGGCAGATTCGA+CGG - chr1_3:29704015-29704034 None:intergenic 65.0%
ACCAGACCCGACACAGGAGG+CGG - chr1_3:29704064-29704083 None:intergenic 65.0%
AGCCCCAACGGTGGTGTAGG+AGG - chr1_3:29704105-29704124 None:intergenic 65.0%
GGAAGCCCCAACGGTGGTGT+AGG - chr1_3:29704108-29704127 None:intergenic 65.0%
!! GGCCCAGCGGATTTTGGAGG+AGG - chr1_3:29707150-29707169 None:intergenic 65.0%
!! GGTGGCCCAGCGGATTTTGG+AGG - chr1_3:29707153-29707172 None:intergenic 65.0%
!! GCAGGTGGCCCAGCGGATTT+TGG - chr1_3:29707156-29707175 None:intergenic 65.0%
CCTGATAGCAGGTGGCCCAG+CGG - chr1_3:29707163-29707182 None:intergenic 65.0%
GTGTGTGGGTGGGTGGGGTG+GGG + chr1_3:29695209-29695228 Msa0113690:intron 70.0%
TGTGTGGGTGGGTGGGGTGG+GGG + chr1_3:29695210-29695229 Msa0113690:intron 70.0%
ACACCCCCACCGTCCAGGAG+TGG + chr1_3:29698041-29698060 Msa0113690:intron 70.0%
CAGAGGTGGGTCCGGCCTAC+AGG - chr1_3:29703772-29703791 None:intergenic 70.0%
CTGTAGGCCGGACCCACCTC+TGG + chr1_3:29703770-29703789 Msa0113690:intron 70.0%
TAGGCCGGACCCACCTCTGG+AGG + chr1_3:29703773-29703792 Msa0113690:intron 70.0%
GACGGTGGCTACAGGGCAGG+CGG - chr1_3:29703997-29704016 None:intergenic 70.0%
CGAATCTGCCACCTGCGCCC+TGG + chr1_3:29704016-29704035 Msa0113690:intron 70.0%
TCCGCCTCCTGTGTCGGGTC+TGG + chr1_3:29704060-29704079 Msa0113690:intron 70.0%
CCGCTGGGCCACCTGCTATC+AGG + chr1_3:29707160-29707179 Msa0113690:intron 70.0%
GTGTGGGTGGGTGGGGTGGG+GGG + chr1_3:29695211-29695230 Msa0113690:intron 75.0%
TGTGGGTGGGTGGGGTGGGG+GGG + chr1_3:29695212-29695231 Msa0113690:intron 75.0%
GCCGGGTCCGCCTCCTGTGT+CGG + chr1_3:29704054-29704073 Msa0113690:intron 75.0%
CCCGACACAGGAGGCGGACC+CGG - chr1_3:29704058-29704077 None:intergenic 75.0%
CCGGGTCCGCCTCCTGTGTC+GGG + chr1_3:29704055-29704074 Msa0113690:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 29693376 29710029 29693376 ID=Msa0113690;Name=Msa0113690
chr1_3 mRNA 29693376 29710029 29693376 ID=Msa0113690-mRNA-1;Parent=Msa0113690;Name=Msa0113690-mRNA-1;_AED=0.21;_eAED=0.21;_QI=122|0.93|1|1|0.93|0.93|16|348|645
chr1_3 exon 29693376 29693785 29693376 ID=Msa0113690-mRNA-1:exon:9843;Parent=Msa0113690-mRNA-1
chr1_3 exon 29694234 29694535 29694234 ID=Msa0113690-mRNA-1:exon:9844;Parent=Msa0113690-mRNA-1
chr1_3 exon 29694624 29694765 29694624 ID=Msa0113690-mRNA-1:exon:9845;Parent=Msa0113690-mRNA-1
chr1_3 exon 29695042 29695145 29695042 ID=Msa0113690-mRNA-1:exon:9846;Parent=Msa0113690-mRNA-1
chr1_3 exon 29696904 29697109 29696904 ID=Msa0113690-mRNA-1:exon:9847;Parent=Msa0113690-mRNA-1
chr1_3 exon 29698676 29698762 29698676 ID=Msa0113690-mRNA-1:exon:9848;Parent=Msa0113690-mRNA-1
chr1_3 exon 29698947 29699087 29698947 ID=Msa0113690-mRNA-1:exon:9849;Parent=Msa0113690-mRNA-1
chr1_3 exon 29699218 29699258 29699218 ID=Msa0113690-mRNA-1:exon:9850;Parent=Msa0113690-mRNA-1
chr1_3 exon 29701351 29701419 29701351 ID=Msa0113690-mRNA-1:exon:9851;Parent=Msa0113690-mRNA-1
chr1_3 exon 29701569 29701669 29701569 ID=Msa0113690-mRNA-1:exon:9852;Parent=Msa0113690-mRNA-1
chr1_3 exon 29701768 29701852 29701768 ID=Msa0113690-mRNA-1:exon:9853;Parent=Msa0113690-mRNA-1
chr1_3 exon 29706356 29706424 29706356 ID=Msa0113690-mRNA-1:exon:9854;Parent=Msa0113690-mRNA-1
chr1_3 exon 29706520 29706651 29706520 ID=Msa0113690-mRNA-1:exon:9855;Parent=Msa0113690-mRNA-1
chr1_3 exon 29708305 29708399 29708305 ID=Msa0113690-mRNA-1:exon:9856;Parent=Msa0113690-mRNA-1
chr1_3 exon 29708699 29708840 29708699 ID=Msa0113690-mRNA-1:exon:9857;Parent=Msa0113690-mRNA-1
chr1_3 exon 29709748 29710029 29709748 ID=Msa0113690-mRNA-1:exon:9858;Parent=Msa0113690-mRNA-1
chr1_3 five_prime_UTR 29693376 29693497 29693376 ID=Msa0113690-mRNA-1:five_prime_utr;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29693498 29693785 29693498 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29694234 29694535 29694234 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29694624 29694765 29694624 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29695042 29695145 29695042 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29696904 29697109 29696904 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29698676 29698762 29698676 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29698947 29699087 29698947 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29699218 29699258 29699218 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29701351 29701419 29701351 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29701569 29701669 29701569 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29701768 29701852 29701768 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29706356 29706424 29706356 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29706520 29706651 29706520 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29708305 29708399 29708305 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 CDS 29708699 29708774 29708699 ID=Msa0113690-mRNA-1:cds;Parent=Msa0113690-mRNA-1
chr1_3 three_prime_UTR 29708775 29708840 29708775 ID=Msa0113690-mRNA-1:three_prime_utr;Parent=Msa0113690-mRNA-1
chr1_3 three_prime_UTR 29709748 29710029 29709748 ID=Msa0113690-mRNA-1:three_prime_utr;Parent=Msa0113690-mRNA-1
Gene Sequence

>Msa0113690

ATGTACGGCGGTGGTGAGCGTGAATGCGAATCTGAGAGCACGATGATGATTATGCAGAACGATGAAGATGAAGAAGACGAAGAAGGTTCTTCTTCTTCTTTCAAGAGCTGGGCAAAGCAAACAGAAGAGAGCTATCAATTGCAGCTCGCACTTGCTCTTCGCATTTCATCTCACTCTGCTTCTTCCGCTCAATCCAATCGCTTCTTGGATTTGGAACCTACCTCCTCTCCTTCTCCTTCTTCTTCTTCTTCTTCCGATTCCCCTCAATCACTTTCACACCGGTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAGTTCTAGATGGATTTTACCTAATTCACGGGATGGATGCATATACATGGACTATAAGTACCGATATGCAGAATGTTGGTATGATTCCATCATTTGAATCACTAATGTCGGTTAAACCGTGTGATAACTCGTCAGTTGTAGTGGTTGCTATTGACAAATCTAGAGACCCTGCCTTGAGAGAACTGCTAACTGGGGTATTAAGTCTTTCAAGTAACTGGATTACCATCAAAGATGCAACTGATCAGCTTGCAAATCTTGTTTGTAGTAGGATGGGGGGAGGATCTTCCGACGAGGAAAATTTAGGTGTGCGCTGGAAGGAATGCTCTGATATTCTTAAAAGCTGTCTGCAGTGTATCATTCTTCCAATTGGAAGCTTACCCGTTGGCCTTTGTGTCCATCGAGCATTGCTCTTTAAAGTGTTAGCGGATTTAATCAACCTACCGTGTCGAATCGCTAAGGGATGCAAGTATTGTAGAAAGGACATGGGTGCTTCTTGTATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCCGGGGATACATGCCAACCTGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCACCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACAATGGCCCAATTGTATTTCTTGGACAATCAAGCACTGCATCTTGTGTTTGAGACCACGTCAGGAGGTACTGTTGATTGTAGGGACAAAGTGGATCTTCAGCAAACTGAAATGTTTGGTGCAAACTATGCTGTTGGGAACAACCATATAGGTCCTGGTACCGAGGAACATGTGTCTTTCAATGAAGCAAACCAATCAGTAGTGAATTATTCGAGTCATGAAGTTGACCTTGAGGAGGAGGATCTGGACATTCCGTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTACTTCGTGCGGATTGGCGTGGCTCTGATGTTGCTGTGAAGATACTTAAGGTGCAAGGTTTTGATTCCGAACGATTTGAAGAGTTTCTAAAGGAGGTCACACTCATGAAGCGTCTACGTCATCCAAACATTGTACTTCTAATGGGCGCTGTTATCCAACCACCAAAATTATCAATAGTAACAGAATATTTATCAAGAGGAAGCTTGTATGAACTTCTGCAGATGCCAGGTGTTGGTTCCTCAATCAGTGAGAAGCGTCGTTTAAGTATGGCATATGACGTGGTATGTGACTTTGGCCTTTCACGTACAAAGGCAAATACATATCTTTCATCTAAAACAGCTGCTGGAACTCCTGAATGGATGGCACCAGAAGTCATCAAAGGTGAACTATCAAATGAAAAATGCGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTGGTGACCCTTCAACAACCATGGAGGCAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGAAATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTAATTGAGCTCTGCTGGTCTACGGAACCAAGGAGGCGGCCTTCTTTCTCCTACATTATGAAATGTTTGCAGCAAATAATTGCCAATGCTAAAGTGTGA
Protein sequence

>Msa0113690

MYGGGERECESESTMMIMQNDEDEEDEEGSSSSFKSWAKQTEESYQLQLALALRISSHSASSAQSNRFLDLEPTSSPSPSSSSSSDSPQSLSHRFWVNGCLQYSDKVLDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVAIDKSRDPALRELLTGVLSLSSNWITIKDATDQLANLVCSRMGGGSSDEENLGVRWKECSDILKSCLQCIILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCIVQFGSDREYMIDLVGRPGDTCQPDSSVNSASSMLIPSPLCHPRFKPVETAEYTKTMAQLYFLDNQALHLVFETTSGGTVDCRDKVDLQQTEMFGANYAVGNNHIGPGTEEHVSFNEANQSVVNYSSHEVDLEEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSERFEEFLKEVTLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLQMPGVGSSISEKRRLSMAYDVVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIKGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPRHVNPQVAALIELCWSTEPRRRPSFSYIMKCLQQIIANAKV*