AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0119170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0119170 MtrunA17_Chr1g0176421 85.217 345 19 1 78 390 295 639 0.0 595
Msa0119170 MtrunA17_Chr1g0170281 75.796 314 73 1 80 390 254 567 1.73e-176 504
Msa0119170 MtrunA17_Chr1g0176751 72.115 312 85 1 80 389 260 571 5.64e-163 469
Msa0119170 MtrunA17_Chr1g0200601 69.707 307 93 0 78 384 164 470 2.51e-157 452
Msa0119170 MtrunA17_Chr5g0448721 70.569 299 88 0 88 386 240 538 5.44e-155 448
Msa0119170 MtrunA17_Chr3g0131181 67.314 309 101 0 78 386 163 471 9.72e-154 444
Msa0119170 MtrunA17_Chr7g0267751 70.100 301 90 0 81 381 272 572 2.25e-153 446
Msa0119170 MtrunA17_Chr8g0385341 69.281 306 94 0 81 386 167 472 9.35e-153 441
Msa0119170 MtrunA17_Chr8g0387671 62.706 303 112 1 80 381 202 504 2.97e-137 401
Msa0119170 MtrunA17_Chr4g0074811 60.784 306 119 1 77 381 224 529 4.32e-136 399
Msa0119170 MtrunA17_Chr5g0444171 59.804 306 122 1 77 381 225 530 1.19e-133 393
Msa0119170 MtrunA17_Chr3g0098951 60.064 313 116 2 77 381 217 528 2.74e-133 392
Msa0119170 MtrunA17_Chr5g0397101 60.984 305 117 2 78 381 201 504 2.01e-132 389
Msa0119170 MtrunA17_Chr0c02g0489761 59.603 302 121 1 81 381 215 516 8.78e-132 388
Msa0119170 MtrunA17_Chr5g0441691 58.224 304 126 1 78 380 202 505 1.17e-129 382
Msa0119170 MtrunA17_Chr1g0157131 58.497 306 126 1 77 381 207 512 1.06e-128 380
Msa0119170 MtrunA17_Chr4g0059951 54.140 314 141 3 77 387 206 519 1.85e-114 345
Msa0119170 MtrunA17_Chr7g0242561 53.185 314 144 2 77 387 189 502 5.90e-113 340
Msa0119170 MtrunA17_Chr4g0074791 52.203 295 129 3 88 381 240 523 2.10e-105 320
Msa0119170 MtrunA17_Chr7g0257751 48.726 314 158 2 77 387 191 504 9.00e-105 319
Msa0119170 MtrunA17_Chr1g0173541 47.771 314 161 3 77 387 185 498 1.16e-104 318
Msa0119170 MtrunA17_Chr4g0033371 47.797 295 153 1 88 381 216 510 1.39e-98 303
Msa0119170 MtrunA17_Chr5g0405421 41.875 320 175 3 78 390 235 550 4.59e-83 264
Msa0119170 MtrunA17_Chr7g0267771 54.106 207 86 2 80 286 224 421 1.03e-63 211
Msa0119170 MtrunA17_Chr8g0374701 35.691 311 190 5 77 381 265 571 6.80e-59 201
Msa0119170 MtrunA17_Chr5g0402551 36.334 311 188 5 77 381 271 577 2.03e-58 199
Msa0119170 MtrunA17_Chr4g0045261 34.084 311 195 5 77 381 274 580 6.57e-57 196
Msa0119170 MtrunA17_Chr7g0256001 34.405 311 195 4 77 381 278 585 3.77e-53 186
Msa0119170 MtrunA17_Chr5g0444191 58.993 139 51 3 85 220 46 181 1.88e-52 174
Msa0119170 MtrunA17_Chr7g0276111 30.994 342 212 7 44 377 258 583 1.19e-50 179
Msa0119170 MtrunA17_Chr3g0127571 34.122 296 179 5 78 364 276 564 3.34e-48 172
Msa0119170 MtrunA17_Chr8g0355131 33.333 321 178 8 93 381 192 508 1.20e-39 147
Msa0119170 MtrunA17_Chr1g0203881 52.991 117 55 0 87 203 184 300 7.83e-35 134
Msa0119170 MtrunA17_Chr1g0190131 50.450 111 54 1 99 208 160 270 1.83e-33 125
Msa0119170 MtrunA17_Chr5g0441771 57.692 104 24 1 168 271 18 101 1.23e-30 113
Msa0119170 MtrunA17_Chr3g0132591 45.133 113 62 0 90 202 248 360 1.82e-27 113
Msa0119170 MtrunA17_Chr5g0440931 37.671 146 88 2 238 380 1 146 1.43e-24 98.2
Msa0119170 MtrunA17_Chr3g0093271 37.671 146 88 2 238 380 52 197 1.74e-24 99.8
Msa0119170 MtrunA17_Chr7g0254731 36.986 146 89 2 238 380 1 146 3.01e-24 97.4
Msa0119170 MtrunA17_Chr6g0460211 36.986 146 89 2 238 380 1 146 5.78e-24 96.7
Msa0119170 MtrunA17_Chr1g0188171 37.671 146 88 2 238 380 1 146 2.49e-23 95.1
Msa0119170 MtrunA17_Chr7g0274941 40.351 114 66 1 99 210 169 282 2.70e-23 98.6
Msa0119170 MtrunA17_Chr1g0166281 36.301 146 90 2 238 380 1 146 6.63e-22 91.3
Msa0119170 MtrunA17_Chr4g0001331 45.283 106 52 3 106 209 180 281 2.02e-20 92.8
Msa0119170 MtrunA17_Chr5g0441781 51.389 72 34 1 311 381 1 72 2.30e-20 85.1
Msa0119170 MtrunA17_Chr8g0366401 33.333 150 94 2 242 385 10 159 2.40e-19 84.3
Msa0119170 MtrunA17_Chr1g0185001 32.886 149 90 3 238 380 1 145 2.51e-19 84.0
Msa0119170 MtrunA17_Chr4g0033601 31.973 147 91 3 250 389 6 150 7.26e-18 80.1
Msa0119170 MtrunA17_Chr7g0274101 35.616 146 91 2 238 380 1 146 7.98e-18 79.7
Msa0119170 MtrunA17_Chr6g0453681 44.444 108 54 3 99 204 170 273 1.47e-17 84.3
Msa0119170 MtrunA17_Chr2g0333821 40.566 106 57 4 106 209 174 275 2.47e-17 83.2
Msa0119170 MtrunA17_Chr4g0062221 32.353 136 87 3 250 380 12 147 3.91e-17 78.6
Msa0119170 MtrunA17_Chr3g0132671 42.202 109 57 3 99 205 200 304 4.06e-17 82.8
Msa0119170 MtrunA17_Chr1g0150321 41.176 102 54 3 106 205 173 270 5.63e-17 82.0
Msa0119170 MtrunA17_Chr6g0468751 44.762 105 52 3 99 201 170 270 7.22e-17 82.0
Msa0119170 MtrunA17_Chr2g0329371 33.566 143 88 3 250 385 65 207 8.15e-17 78.6
Msa0119170 MtrunA17_Chr7g0245231 30.405 148 100 2 241 385 22 169 2.43e-16 76.3
Msa0119170 MtrunA17_Chr7g0244561 37.838 111 63 4 105 213 177 283 2.75e-16 80.1
Msa0119170 MtrunA17_Chr6g0450921 31.655 139 92 2 250 385 30 168 8.42e-16 74.7
Msa0119170 MtrunA17_Chr8g0353621 33.028 109 70 2 95 202 155 261 9.97e-16 76.6
Msa0119170 MtrunA17_Chr8g0351491 31.818 110 72 2 95 203 161 268 1.39e-15 76.3
Msa0119170 MtrunA17_Chr1g0187581 32.099 162 101 4 53 211 268 423 1.70e-15 78.2
Msa0119170 MtrunA17_Chr3g0135951 40.708 113 56 6 105 211 301 408 1.83e-15 77.8
Msa0119170 MtrunA17_Chr1g0167311 32.692 156 96 5 53 204 266 416 3.03e-15 77.4
Msa0119170 MtrunA17_Chr4g0008561 34.234 111 70 3 105 213 178 287 5.46e-15 76.6
Msa0119170 MtrunA17_Chr5g0399911 42.000 100 54 4 106 201 175 274 7.60e-15 75.1
Msa0119170 MtrunA17_Chr8g0392951 32.593 135 89 1 250 382 25 159 7.66e-15 72.0
Msa0119170 MtrunA17_Chr3g0125381 34.000 100 63 2 105 203 110 207 7.95e-15 73.2
Msa0119170 MtrunA17_Chr4g0069301 40.196 102 55 3 106 205 187 284 8.23e-15 75.9
Msa0119170 MtrunA17_Chr3g0140631 33.028 109 70 2 95 202 182 288 1.22e-14 73.9
Msa0119170 MtrunA17_Chr8g0380661 33.962 106 64 4 105 205 156 260 1.40e-14 73.9
Msa0119170 MtrunA17_Chr3g0131061 36.000 100 60 3 106 201 160 259 1.48e-14 74.3
Msa0119170 MtrunA17_Chr2g0304111 37.736 106 60 4 106 209 184 285 1.63e-14 74.7
Msa0119170 MtrunA17_Chr5g0398751 29.452 146 98 3 238 380 1 144 3.68e-14 69.3
Msa0119170 MtrunA17_Chr2g0277501 36.000 100 60 3 106 201 160 259 4.49e-14 72.8
Msa0119170 MtrunA17_Chr8g0381821 40.000 100 56 4 106 201 160 259 5.35e-14 72.4
Msa0119170 MtrunA17_Chr1g0167351 32.317 164 99 6 53 211 261 417 6.93e-14 73.2
Msa0119170 MtrunA17_Chr8g0385281 36.000 100 60 3 106 201 161 260 1.43e-13 71.2
Msa0119170 MtrunA17_Chr8g0351681 31.081 148 91 4 245 381 45 192 1.49e-13 68.9
Msa0119170 MtrunA17_Chr2g0299781 39.423 104 56 4 105 203 320 421 1.76e-13 72.0
Msa0119170 MtrunA17_Chr3g0123791 32.886 149 87 6 59 201 119 260 1.86e-13 70.9
Msa0119170 MtrunA17_Chr6g0478601 40.426 94 46 3 106 194 301 389 1.93e-13 71.6
Msa0119170 MtrunA17_Chr2g0284011 34.314 102 61 3 106 205 172 269 2.19e-13 71.2
Msa0119170 MtrunA17_Chr4g0045371 39.604 101 55 4 106 201 179 278 2.30e-13 70.9
Msa0119170 MtrunA17_Chr2g0284031 34.906 106 63 4 102 205 187 288 3.05e-13 71.2
Msa0119170 MtrunA17_Chr4g0055451 38.235 102 57 4 105 201 160 260 3.46e-13 70.1
Msa0119170 MtrunA17_Chr1g0183651 35.897 117 66 4 71 184 288 398 3.85e-13 70.9
Msa0119170 MtrunA17_Chr5g0428981 35.537 121 73 3 75 191 918 1037 3.89e-13 71.2
Msa0119170 MtrunA17_Chr5g0432491 33.981 103 62 4 105 205 183 281 5.00e-13 70.1
Msa0119170 MtrunA17_Chr6g0453671 39.450 109 58 5 99 204 170 273 5.24e-13 69.7
Msa0119170 MtrunA17_Chr4g0018201 35.200 125 68 4 75 191 914 1033 5.40e-13 70.9
Msa0119170 MtrunA17_Chr4g0063881 36.792 106 61 4 100 203 164 265 6.42e-13 69.7
Msa0119170 MtrunA17_Chr1g0205421 33.607 122 69 5 86 205 158 269 7.69e-13 69.7
Msa0119170 MtrunA17_Chr7g0244521 38.182 110 54 5 106 209 172 273 8.91e-13 69.3
Msa0119170 MtrunA17_Chr4g0013131 34.862 109 65 4 106 212 172 276 1.02e-12 69.3
Msa0119170 MtrunA17_Chr8g0368681 30.070 143 95 3 243 380 6 148 1.16e-12 65.5
Msa0119170 MtrunA17_Chr1g0162301 39.000 100 57 4 106 201 180 279 1.23e-12 68.6
Msa0119170 MtrunA17_Chr5g0426521 36.190 105 53 4 106 201 160 259 1.64e-12 68.2
Msa0119170 MtrunA17_Chr6g0482731 30.597 134 90 2 250 380 27 160 2.30e-12 65.1
Msa0119170 MtrunA17_Chr1g0153321 37.864 103 59 3 105 203 308 409 2.38e-12 68.2
Msa0119170 MtrunA17_Chr7g0256171 27.273 143 95 3 250 385 6 146 3.03e-12 64.3
Msa0119170 MtrunA17_Chr8g0374571 37.624 101 57 4 106 201 179 278 3.24e-12 67.4
Msa0119170 MtrunA17_Chr7g0245371 30.000 150 88 3 250 383 25 173 3.28e-12 64.7
Msa0119170 MtrunA17_Chr7g0261491 34.188 117 68 4 71 184 288 398 9.28e-12 66.6
Msa0119170 MtrunA17_Chr2g0302431 33.333 102 62 3 106 205 181 278 1.12e-11 66.2
Msa0119170 MtrunA17_Chr3g0116141 29.412 136 94 1 248 381 4 139 1.24e-11 62.0
Msa0119170 MtrunA17_Chr3g0116151 29.412 136 94 1 248 381 5 140 1.24e-11 62.0
Msa0119170 MtrunA17_Chr5g0402661 37.000 100 59 3 106 201 174 273 1.60e-11 65.1
Msa0119170 MtrunA17_Chr5g0402361 31.915 141 91 2 250 388 49 186 1.99e-11 65.1
Msa0119170 MtrunA17_Chr8g0338741 33.929 112 66 3 106 216 251 355 2.17e-11 65.1
Msa0119170 MtrunA17_Chr7g0260191 33.636 110 67 3 96 203 154 259 2.75e-11 65.1
Msa0119170 MtrunA17_Chr3g0115171 37.624 101 55 4 107 203 441 537 3.31e-11 64.7
Msa0119170 MtrunA17_Chr4g0044961 31.159 138 82 4 250 380 58 189 3.89e-11 62.0
Msa0119170 MtrunA17_Chr8g0391691 32.857 140 86 4 243 376 29 166 4.60e-11 61.6
Msa0119170 MtrunA17_Chr3g0107051 33.010 103 63 4 105 205 180 278 4.69e-11 64.3
Msa0119170 MtrunA17_Chr5g0402331 30.986 142 92 3 250 388 49 187 6.14e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0119170 AT2G38910.1 82.428 313 55 0 78 390 268 580 0.0 540
Msa0119170 AT5G04870.1 76.645 304 71 0 78 381 284 587 1.26e-171 493
Msa0119170 AT3G10660.2 75.658 304 74 0 78 381 320 623 2.45e-170 491
Msa0119170 AT3G10660.1 75.658 304 74 0 78 381 320 623 2.45e-170 491
Msa0119170 AT1G35670.1 69.381 307 94 0 78 384 160 466 6.90e-155 446
Msa0119170 AT4G09570.1 69.055 307 95 0 78 384 159 465 2.10e-154 445
Msa0119170 AT4G38230.1 68.333 300 95 0 88 387 24 323 3.83e-152 433
Msa0119170 AT4G38230.4 68.333 300 95 0 88 387 168 467 1.07e-150 435
Msa0119170 AT4G38230.3 68.333 300 95 0 88 387 168 467 1.07e-150 435
Msa0119170 AT4G38230.2 68.333 300 95 0 88 387 198 497 2.86e-150 435
Msa0119170 AT2G17290.1 68.896 299 93 0 88 386 229 527 2.90e-150 436
Msa0119170 AT2G17290.2 68.896 299 93 0 88 386 229 527 2.90e-150 436
Msa0119170 AT4G35310.2 69.231 299 92 0 88 386 241 539 4.34e-150 436
Msa0119170 AT4G35310.1 69.231 299 92 0 88 386 241 539 4.34e-150 436
Msa0119170 AT5G23580.1 65.574 305 105 0 77 381 155 459 1.29e-146 425
Msa0119170 AT4G04720.2 61.765 306 115 2 77 381 213 517 2.45e-138 405
Msa0119170 AT4G04720.1 61.765 306 115 2 77 381 213 517 2.45e-138 405
Msa0119170 AT1G76040.1 61.130 301 107 3 82 381 20 311 1.34e-134 388
Msa0119170 AT1G76040.4 61.130 301 107 3 82 381 20 311 1.34e-134 388
Msa0119170 AT4G21940.1 60.131 306 120 2 77 381 235 539 2.69e-134 395
Msa0119170 AT4G21940.2 60.131 306 120 2 77 381 235 539 3.16e-134 395
Msa0119170 AT5G19360.1 60.656 305 119 1 78 381 202 506 2.39e-133 392
Msa0119170 AT4G23650.1 60.000 305 121 1 78 381 212 516 7.75e-133 391
Msa0119170 AT5G12180.1 60.265 302 119 1 81 381 210 511 2.51e-132 390
Msa0119170 AT1G50700.1 59.477 306 123 1 77 381 206 511 7.58e-132 388
Msa0119170 AT1G76040.2 60.328 305 119 2 78 381 246 549 1.28e-131 389
Msa0119170 AT3G20410.2 58.824 306 125 1 77 381 224 529 3.10e-130 385
Msa0119170 AT3G20410.1 58.824 306 125 1 77 381 224 529 3.10e-130 385
Msa0119170 AT1G50700.2 54.819 332 123 2 77 381 206 537 1.11e-125 373
Msa0119170 AT1G61950.1 58.644 295 121 1 90 383 245 539 2.04e-124 370
Msa0119170 AT4G04740.4 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G04740.6 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G04740.5 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G04740.3 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G04740.1 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G04740.7 54.902 306 136 2 77 381 202 506 1.60e-120 359
Msa0119170 AT4G21940.3 62.162 259 97 1 77 335 235 492 1.54e-116 348
Msa0119170 AT3G51850.1 53.503 314 143 2 77 387 187 500 8.10e-114 342
Msa0119170 AT4G04710.2 54.723 307 130 3 77 382 173 471 3.50e-113 339
Msa0119170 AT4G04740.2 54.795 292 130 2 77 367 202 492 3.59e-113 341
Msa0119170 AT4G04710.3 54.723 307 130 3 77 382 159 457 3.75e-113 339
Msa0119170 AT1G74740.1 53.503 314 143 3 77 387 192 505 4.89e-113 341
Msa0119170 AT1G50700.3 61.004 259 101 0 77 335 206 464 5.31e-113 338
Msa0119170 AT5G12480.2 52.025 321 138 3 77 387 98 412 6.07e-113 337
Msa0119170 AT1G76040.3 61.538 260 99 1 78 337 246 504 1.43e-112 338
Msa0119170 AT1G18890.1 54.140 314 141 3 77 387 196 509 1.78e-112 339
Msa0119170 AT4G04710.1 53.822 314 135 3 77 382 173 484 3.16e-112 337
Msa0119170 AT5G12480.1 52.025 321 138 3 77 387 192 506 1.29e-111 337
Msa0119170 AT4G04710.4 53.481 316 135 4 77 382 173 486 2.54e-110 332
Msa0119170 AT5G19450.2 50.779 321 142 4 77 387 190 504 3.16e-108 328
Msa0119170 AT5G19450.1 50.779 321 142 4 77 387 190 504 3.16e-108 328
Msa0119170 AT3G57530.1 49.201 313 157 2 77 387 196 508 3.70e-106 323
Msa0119170 AT3G51850.2 53.082 292 135 1 77 366 187 478 1.67e-105 320
Msa0119170 AT4G04695.1 51.961 306 145 2 77 381 165 469 1.95e-105 319
Msa0119170 AT4G04700.1 49.673 306 152 2 77 381 165 469 1.75e-101 309
Msa0119170 AT2G41860.1 48.589 319 151 3 77 387 187 500 3.95e-101 310
Msa0119170 AT2G41860.2 48.276 319 152 3 77 387 187 500 1.36e-100 308
Msa0119170 AT2G35890.2 60.166 241 95 1 81 320 269 509 3.89e-98 302
Msa0119170 AT2G35890.1 60.166 241 95 1 81 320 269 509 3.89e-98 302
Msa0119170 AT2G31500.1 45.484 310 164 1 77 381 199 508 4.35e-95 296
Msa0119170 AT2G17890.1 44.373 311 162 3 78 381 244 550 3.78e-86 272
Msa0119170 AT5G66210.1 44.369 293 152 3 96 381 216 504 2.98e-81 258
Msa0119170 AT5G66210.2 44.369 293 152 3 96 381 216 504 2.98e-81 258
Msa0119170 AT4G36070.1 41.250 320 177 4 78 390 207 522 6.08e-81 258
Msa0119170 AT4G36070.2 41.250 320 177 4 78 390 207 522 1.04e-80 258
Msa0119170 AT3G51850.3 52.423 227 108 0 77 303 187 413 3.45e-80 252
Msa0119170 AT3G57530.2 51.613 217 105 0 80 296 199 415 7.98e-77 244
Msa0119170 AT5G66210.3 46.693 257 130 2 96 345 216 472 9.58e-77 246
Msa0119170 AT5G66210.5 46.667 255 129 2 96 343 216 470 3.30e-76 244
Msa0119170 AT5G66210.6 48.990 198 100 1 96 292 216 413 1.10e-61 205
Msa0119170 AT5G66210.4 48.990 198 100 1 96 292 216 413 1.10e-61 205
Msa0119170 AT3G50530.1 34.084 311 195 5 77 381 285 591 7.01e-58 199
Msa0119170 AT3G50530.2 35.764 288 175 5 100 381 339 622 2.74e-57 198
Msa0119170 AT1G49580.1 32.602 319 206 4 77 389 287 602 1.54e-55 192
Msa0119170 AT2G41140.1 34.084 311 195 5 77 381 260 566 7.53e-54 187
Msa0119170 AT3G19100.1 34.084 311 195 5 77 381 281 587 3.78e-53 186
Msa0119170 AT3G56760.1 32.353 340 214 7 49 381 237 567 8.50e-52 182
Msa0119170 AT2G46700.2 32.903 310 197 4 77 381 99 402 6.03e-48 168
Msa0119170 AT2G46700.3 32.903 310 197 4 77 381 99 402 6.03e-48 168
Msa0119170 AT2G46700.1 32.903 310 197 4 77 381 280 583 4.64e-47 169
Msa0119170 AT5G24430.1 31.902 326 204 6 44 364 257 569 4.81e-43 158
Msa0119170 AT3G49370.1 30.321 343 217 7 44 381 256 581 1.98e-42 157
Msa0119170 AT1G12580.1 51.282 117 57 0 87 203 187 303 1.17e-34 134
Msa0119170 AT1G08650.1 44.094 127 70 1 81 206 151 277 1.46e-32 124
Msa0119170 AT1G12680.1 48.739 119 61 0 84 202 237 355 3.59e-31 124
Msa0119170 AT3G04530.1 49.057 106 53 1 99 203 165 270 3.00e-28 112
Msa0119170 AT1G08650.2 43.220 118 66 1 81 197 151 268 1.03e-27 110
Msa0119170 AT5G21274.1 36.986 146 89 2 238 380 1 146 6.85e-24 97.1
Msa0119170 AT3G43810.1 36.986 146 89 2 238 380 1 146 7.98e-24 96.7
Msa0119170 AT3G43810.2 36.986 146 89 2 238 380 1 146 9.83e-24 98.6
Msa0119170 AT1G66410.1 36.986 146 89 2 238 380 1 146 1.13e-23 96.3
Msa0119170 AT5G37780.1 36.986 146 89 2 238 380 1 146 1.13e-23 96.3
Msa0119170 AT2G27030.3 35.714 154 96 2 238 388 1 154 1.19e-23 97.4
Msa0119170 AT3G56800.1 36.301 146 90 2 238 380 1 146 2.93e-23 95.1
Msa0119170 AT2G41110.1 36.301 146 90 2 238 380 1 146 2.93e-23 95.1
Msa0119170 AT2G27030.1 36.301 146 90 2 238 380 1 146 2.93e-23 95.1
Msa0119170 AT3G59440.1 34.266 143 90 1 250 388 52 194 2.18e-22 94.4
Msa0119170 AT4G14640.1 36.301 146 90 2 242 384 6 151 4.57e-21 89.4
Msa0119170 AT2G41110.2 33.544 158 90 3 238 380 1 158 1.07e-20 88.6
Msa0119170 AT3G22930.1 36.620 142 87 2 242 380 28 169 2.44e-20 87.8
Msa0119170 AT5G37780.2 33.540 161 89 3 238 380 1 161 7.63e-20 86.3
Msa0119170 AT1G66410.2 34.615 156 89 3 238 380 1 156 5.13e-19 84.0
Msa0119170 AT2G43290.1 34.247 146 86 2 250 385 66 211 5.68e-19 85.1
Msa0119170 AT1G05990.1 35.915 142 85 3 250 385 6 147 6.69e-19 83.2
Msa0119170 AT3G50360.1 32.857 140 91 2 250 386 28 167 1.09e-18 83.2
Msa0119170 AT3G03000.1 36.242 149 89 3 242 385 13 160 1.15e-18 83.2
Msa0119170 AT5G37780.3 31.395 172 89 3 238 380 1 172 1.80e-18 82.8
Msa0119170 AT4G37010.1 32.857 140 91 2 250 386 28 167 2.71e-18 82.0
Msa0119170 AT4G37010.2 32.857 140 91 2 250 386 32 171 2.97e-18 82.0
Msa0119170 AT2G25090.1 41.000 100 53 4 106 203 184 279 1.01e-17 85.1
Msa0119170 AT5G25110.1 39.000 100 55 3 106 203 203 298 1.14e-17 85.1
Msa0119170 AT2G41100.7 32.121 165 92 4 236 380 53 217 1.15e-17 83.2
Msa0119170 AT2G41100.6 32.121 165 92 4 236 380 53 217 1.15e-17 83.2
Msa0119170 AT2G41100.3 32.121 165 92 4 236 380 53 217 1.15e-17 83.2
Msa0119170 AT5G37780.4 36.885 122 74 2 262 380 12 133 1.32e-17 79.3
Msa0119170 AT1G30270.3 40.187 107 58 4 105 209 94 196 1.34e-17 84.0
Msa0119170 AT4G03290.1 32.639 144 89 2 250 385 6 149 1.71e-17 79.3
Msa0119170 AT1G30270.1 40.187 107 58 4 105 209 191 293 2.00e-17 84.3
Msa0119170 AT5G10930.1 34.188 117 66 4 106 215 173 285 2.16e-17 84.0
Msa0119170 AT2G41100.4 32.121 165 92 4 236 380 88 252 2.36e-17 82.8
Msa0119170 AT2G41100.4 30.864 162 93 3 238 380 1 162 1.93e-15 77.0
Msa0119170 AT2G41100.1 32.121 165 92 4 236 380 88 252 2.36e-17 82.8
Msa0119170 AT2G41100.1 30.864 162 93 3 238 380 1 162 1.93e-15 77.0
Msa0119170 AT1G30270.2 40.187 107 58 4 105 209 191 293 2.56e-17 84.0
Msa0119170 AT5G39440.1 41.346 104 56 2 99 201 170 269 2.66e-17 84.0
Msa0119170 AT3G01090.3 44.860 107 53 3 99 203 170 272 2.66e-17 84.0
Msa0119170 AT3G01090.1 44.860 107 53 3 99 203 170 272 2.66e-17 84.0
Msa0119170 AT3G01090.2 44.860 107 53 3 99 203 193 295 2.75e-17 84.0
Msa0119170 AT1G45160.2 39.252 107 52 4 105 203 855 956 3.20e-17 84.3
Msa0119170 AT4G14640.2 36.800 125 76 2 263 384 9 133 3.41e-17 77.8
Msa0119170 AT1G45160.1 39.252 107 52 4 105 203 855 956 4.40e-17 84.0
Msa0119170 AT1G32250.1 31.210 157 99 3 238 385 5 161 6.27e-17 78.2
Msa0119170 AT3G29160.3 44.860 107 53 3 99 203 171 273 1.53e-16 80.9
Msa0119170 AT3G10190.1 33.835 133 84 2 252 380 73 205 1.89e-16 77.8
Msa0119170 AT3G43810.4 37.273 110 66 2 274 380 1 110 2.90e-16 74.7
Msa0119170 AT3G43810.3 37.273 110 66 2 274 380 1 110 2.90e-16 74.7
Msa0119170 AT3G29160.1 44.860 107 53 3 99 203 171 273 3.25e-16 80.5
Msa0119170 AT3G29160.2 44.860 107 53 3 99 203 171 273 3.25e-16 80.5
Msa0119170 AT2G45490.1 32.110 109 71 2 95 202 167 273 8.63e-16 77.8
Msa0119170 AT1G66410.4 36.364 110 67 2 274 380 1 110 9.80e-16 73.2
Msa0119170 AT1G66410.3 36.364 110 67 2 274 380 1 110 9.80e-16 73.2
Msa0119170 AT2G41090.1 31.034 145 96 2 238 380 1 143 2.01e-15 74.7
Msa0119170 AT2G30360.1 34.307 137 79 5 105 234 182 314 2.48e-15 77.8
Msa0119170 AT1G30640.2 34.848 132 75 5 77 203 299 424 3.51e-15 77.4
Msa0119170 AT1G30640.1 34.848 132 75 5 77 203 299 424 3.51e-15 77.4
Msa0119170 AT1G30640.3 34.848 132 75 5 77 203 206 331 3.95e-15 77.0
Msa0119170 AT4G30960.1 39.000 100 55 4 106 203 184 279 5.25e-15 76.6
Msa0119170 AT1G18530.1 31.690 142 92 3 244 380 2 143 1.38e-14 71.2
Msa0119170 AT5G62310.1 41.489 94 45 3 105 193 943 1031 1.52e-14 76.3
Msa0119170 AT3G51920.1 30.137 146 99 2 238 380 1 146 2.24e-14 70.5
Msa0119170 AT2G25880.2 32.110 109 71 2 95 202 138 244 2.67e-14 72.8
Msa0119170 AT5G57630.3 28.261 184 116 8 98 270 73 251 3.05e-14 73.6
Msa0119170 AT2G25880.1 32.110 109 71 2 95 202 170 276 3.89e-14 72.8
Msa0119170 AT4G40010.1 39.623 106 56 4 106 205 160 263 3.92e-14 73.6
Msa0119170 AT5G08590.2 36.634 101 60 3 105 201 83 183 4.64e-14 72.4
Msa0119170 AT2G25880.4 32.110 109 71 2 95 202 183 289 4.72e-14 72.8
Msa0119170 AT5G08590.1 37.000 100 59 3 106 201 160 259 5.63e-14 73.2
Msa0119170 AT4G18700.1 35.849 106 62 4 102 205 182 283 5.92e-14 73.6
Msa0119170 AT5G45810.1 35.849 106 62 4 102 205 184 285 6.00e-14 73.6
Msa0119170 AT5G21326.1 39.000 100 55 4 106 203 174 269 6.69e-14 73.2
Msa0119170 AT4G32830.1 33.028 109 70 2 95 202 176 282 7.93e-14 72.0
Msa0119170 AT3G61960.1 35.345 116 70 3 97 210 164 276 8.75e-14 73.6
Msa0119170 AT5G57630.2 28.261 184 116 8 98 270 161 339 8.81e-14 72.8
Msa0119170 AT5G57630.1 28.261 184 116 8 98 270 161 339 8.96e-14 72.8
Msa0119170 AT2G34180.1 39.216 102 56 4 106 205 217 314 9.11e-14 73.2
Msa0119170 AT3G61960.2 35.345 116 70 3 97 210 164 276 1.02e-13 73.2
Msa0119170 AT1G48260.2 40.594 101 52 4 106 203 87 182 1.10e-13 72.0
Msa0119170 AT1G48260.4 40.594 101 52 4 106 203 87 182 1.10e-13 72.0
Msa0119170 AT1G48260.3 40.594 101 52 4 106 203 87 182 1.10e-13 72.0
Msa0119170 AT1G48260.5 40.594 101 52 4 106 203 87 182 1.10e-13 72.0
Msa0119170 AT2G25880.3 32.110 109 71 2 95 202 231 337 1.27e-13 72.0
Msa0119170 AT1G48260.1 40.594 101 52 4 106 203 172 267 1.34e-13 72.4
Msa0119170 AT1G01140.2 36.792 106 63 3 106 209 180 283 1.34e-13 72.4
Msa0119170 AT4G33950.2 38.000 100 58 3 106 201 177 276 1.64e-13 71.6
Msa0119170 AT5G01810.1 35.294 102 60 3 106 205 172 269 1.72e-13 72.0
Msa0119170 AT5G01810.2 35.294 102 60 3 106 205 172 269 1.72e-13 72.0
Msa0119170 AT5G09890.2 32.911 158 94 6 68 220 270 420 1.92e-13 72.0
Msa0119170 AT2G26980.1 39.000 100 55 3 106 203 175 270 1.94e-13 71.6
Msa0119170 AT4G33950.1 38.000 100 58 3 106 201 177 276 1.95e-13 71.6
Msa0119170 AT5G09890.1 32.911 158 94 6 68 220 270 420 2.02e-13 72.0
Msa0119170 AT2G20470.3 31.884 138 83 5 72 204 292 423 2.14e-13 72.0
Msa0119170 AT1G62820.1 29.167 144 97 3 240 380 4 145 2.38e-13 67.4
Msa0119170 AT1G03920.1 31.818 132 79 5 77 203 311 436 2.44e-13 72.0
Msa0119170 AT1G03920.3 31.818 132 79 5 77 203 311 436 2.44e-13 72.0
Msa0119170 AT2G26980.3 39.000 100 55 3 106 203 175 270 2.47e-13 71.6
Msa0119170 AT2G20470.2 31.884 138 83 5 72 204 292 423 2.53e-13 72.0
Msa0119170 AT2G20470.1 31.884 138 83 5 72 204 292 423 2.53e-13 72.0
Msa0119170 AT5G01810.3 35.294 102 60 3 106 205 172 269 2.57e-13 71.2
Msa0119170 AT2G26980.4 39.000 100 55 3 106 203 185 280 2.59e-13 71.6
Msa0119170 AT3G23310.1 40.196 102 54 4 105 201 321 420 2.65e-13 71.6
Msa0119170 AT4G14350.3 35.246 122 68 5 87 203 304 419 2.69e-13 71.6
Msa0119170 AT2G26980.5 39.000 100 55 3 106 203 175 270 2.74e-13 71.2
Msa0119170 AT4G14350.2 35.246 122 68 5 87 203 304 419 2.88e-13 71.6
Msa0119170 AT4G14350.1 35.246 122 68 5 87 203 304 419 2.88e-13 71.6
Msa0119170 AT4G14350.4 35.246 122 68 5 87 203 304 419 2.88e-13 71.6
Msa0119170 AT1G29230.1 39.048 105 52 5 106 205 234 331 3.53e-13 71.2
Msa0119170 AT1G03920.2 31.818 132 79 5 77 203 198 323 3.94e-13 70.9
Msa0119170 AT3G25600.1 30.496 141 93 3 245 380 8 148 5.09e-13 67.0
Msa0119170 AT3G17510.2 36.275 102 57 3 106 204 101 197 5.24e-13 70.1
Msa0119170 AT1G48490.3 34.400 125 70 4 75 194 983 1100 5.90e-13 71.2
Msa0119170 AT1G48490.2 34.400 125 70 4 75 194 983 1100 5.90e-13 71.2
Msa0119170 AT1G48490.1 34.400 125 70 4 75 194 983 1100 5.90e-13 71.2
Msa0119170 AT1G48490.4 34.400 125 70 4 75 194 984 1101 6.01e-13 71.2
Msa0119170 AT4G12860.1 32.624 141 90 3 250 385 6 146 6.82e-13 66.2
Msa0119170 AT3G17510.1 36.275 102 57 3 106 204 181 277 6.97e-13 70.1
Msa0119170 AT1G10940.2 36.000 100 60 3 106 201 168 267 8.19e-13 69.7
Msa0119170 AT4G33080.1 38.095 105 57 4 105 203 301 403 8.33e-13 70.1
Msa0119170 AT4G33080.2 38.095 105 57 4 105 203 301 403 9.42e-13 70.1
Msa0119170 AT1G10940.1 36.000 100 60 3 106 201 160 259 9.70e-13 69.3
Msa0119170 AT5G63650.1 35.294 102 62 3 104 201 158 259 1.02e-12 69.3
Msa0119170 AT3G17850.1 37.895 95 49 3 105 194 1071 1160 1.03e-12 70.5
Msa0119170 AT5G40030.1 33.571 140 76 5 94 219 333 469 1.07e-12 69.7
Msa0119170 AT1G60940.1 36.000 100 60 3 106 201 160 259 1.16e-12 68.9
Msa0119170 AT1G60940.2 36.000 100 60 3 106 201 160 259 1.16e-12 68.9
Msa0119170 AT1G12310.1 27.778 144 99 3 240 380 4 145 1.50e-12 65.5
Msa0119170 AT5G45820.1 36.275 102 59 4 106 205 172 269 1.59e-12 68.9
Msa0119170 AT2G19400.1 33.333 105 63 3 105 203 312 415 1.77e-12 69.3
Msa0119170 AT1G78290.3 38.235 102 55 5 106 201 160 259 2.59e-12 67.8
Msa0119170 AT1G78290.2 38.235 102 55 5 106 201 160 259 2.59e-12 67.8
Msa0119170 AT3G07490.1 31.293 147 96 3 248 389 4 150 2.71e-12 64.7
Msa0119170 AT1G18210.2 29.323 133 89 3 250 380 24 153 3.81e-12 64.7
Msa0119170 AT1G18210.1 29.323 133 89 3 250 380 24 153 3.81e-12 64.7
Msa0119170 AT3G12690.1 33.043 115 64 4 106 209 410 522 4.68e-12 67.8
Msa0119170 AT3G12690.3 33.043 115 64 4 106 209 410 522 4.68e-12 67.8
Msa0119170 AT3G12690.2 33.043 115 64 4 106 209 410 522 4.68e-12 67.8
Msa0119170 AT2G23030.1 35.000 100 61 3 106 201 160 259 5.76e-12 67.0
Msa0119170 AT5G44460.1 31.788 151 80 5 250 381 29 175 8.78e-12 63.9
Msa0119170 AT1G79250.1 33.010 103 62 3 106 203 381 481 2.68e-11 65.5
Msa0119170 AT1G79250.3 33.010 103 62 3 106 203 381 481 2.68e-11 65.5
Msa0119170 AT1G79250.2 33.010 103 62 3 106 203 381 481 2.68e-11 65.5
Msa0119170 AT1G79250.4 33.010 103 62 3 106 203 381 481 2.68e-11 65.5
Msa0119170 AT5G42380.1 29.412 136 92 2 250 381 50 185 2.82e-11 62.4
Msa0119170 AT4G14640.3 33.333 105 69 1 242 345 6 110 2.93e-11 60.8
Msa0119170 AT1G73630.1 28.148 135 90 4 250 381 21 151 3.84e-11 61.6
Msa0119170 AT3G07980.1 33.000 100 63 2 105 203 179 275 6.37e-11 64.7
Msa0119170 AT3G07980.2 33.000 100 63 2 105 203 179 275 6.81e-11 64.7
Msa0119170 AT2G20050.2 33.600 125 69 6 85 201 916 1034 6.91e-11 64.7
Msa0119170 AT2G20050.1 33.600 125 69 6 85 201 919 1037 7.04e-11 64.7

Find 91 sgRNAs with CRISPR-Local

Find 647 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCATTGCAGATGAAAATT+TGG 0.223629 1_3:+42827637 Msa0119170:CDS
TTGGAAAATGCTTGAGCTTC+AGG 0.224319 1_3:+42837153 Msa0119170:three_prime_UTR
ATCTTTGTCAAAGTAGTTAA+AGG 0.225553 1_3:-42836659 None:intergenic
TCAGTGGAGTTCCACCATTT+TGG 0.231852 1_3:+42835066 Msa0119170:CDS
ACTTCAGGAGCAACATAGTA+TGG 0.247958 1_3:-42834978 None:intergenic
TTGTTCGAAGAATGCTTATA+AGG 0.248695 1_3:+42835285 Msa0119170:CDS
TTGTAGGCCAAACTGGTTAC+AGG 0.264534 1_3:-42836719 None:intergenic
ATGATGCAAGACACTGATTT+TGG 0.279909 1_3:+42836985 Msa0119170:CDS
CGAGCGAGTTTCTTCTGTTC+TGG 0.286076 1_3:+42837104 Msa0119170:three_prime_UTR
TGCAGGCCATCCTTGGGTTC+AGG 0.290612 1_3:+42835854 Msa0119170:intron
TGTGCCGTCATCCTCTTCTT+AGG 0.306728 1_3:-42835311 None:intergenic
GATCATTTGCAGGCCATCCT+TGG 0.355708 1_3:+42835847 Msa0119170:intron
GCGGAGTCAAGCGGTTTATC+AGG 0.357684 1_3:-42835891 None:intergenic
AAGAGTTGGTTCGGTTCTTA+AGG 0.358306 1_3:+42836334 Msa0119170:CDS
ATTATGTAAGTGAATGCATT+TGG 0.358966 1_3:+42837134 Msa0119170:three_prime_UTR
CATCTAGATGATCATCTTGT+AGG 0.364118 1_3:-42836735 None:intergenic
CCAATTGTTGCTGCGGTGAT+GGG 0.367340 1_3:-42827475 None:intergenic
AGTGATTCTTGCTGCGGTGA+TGG 0.368387 1_3:-42827524 None:intergenic
GCATTCTCACCATCCCAAAA+TGG 0.379776 1_3:-42835080 None:intergenic
TAGTTCTTCCGTAAAACTTC+AGG 0.381380 1_3:-42834993 None:intergenic
TTTAACTACTTTGACAAAGA+TGG 0.384347 1_3:+42836661 Msa0119170:CDS
TATGAATTCACCATAGTCTA+TGG 0.385662 1_3:-42836584 None:intergenic
TTAAGGATTCTGAAATCAAC+TGG 0.396005 1_3:+42836351 Msa0119170:CDS
TGGAAAATGCTTGAGCTTCA+GGG 0.399810 1_3:+42837154 Msa0119170:three_prime_UTR
ATCATTTGCAGGCCATCCTT+GGG 0.399822 1_3:+42835848 Msa0119170:intron
GATCATCTTGTAGGCCAAAC+TGG 0.400649 1_3:-42836726 None:intergenic
CCCATCACCGCAGCAACAAT+TGG 0.400846 1_3:+42827475 Msa0119170:CDS
TCCAATTGTTGCTGCGGTGA+TGG 0.400935 1_3:-42827476 None:intergenic
TTATATATCAAGTCATCATT+TGG 0.415664 1_3:-42837078 None:intergenic
CAAACTGGTTACAGGCTTGT+TGG 0.417427 1_3:-42836711 None:intergenic
TGTTCGAAGAATGCTTATAA+GGG 0.420545 1_3:+42835286 Msa0119170:CDS
TGGCTTAGAAAGAGTTGGTT+CGG 0.424880 1_3:+42836325 Msa0119170:CDS
AAATGTCTCACCTGTGGTAA+TGG 0.426825 1_3:-42834937 None:intergenic
CAACAAGCCTGTAACCAGTT+TGG 0.430633 1_3:+42836712 Msa0119170:CDS
CATCCTTGGGTTCAGGTTGG+AGG 0.437957 1_3:+42835861 Msa0119170:CDS
GTGATTCTTGCTGCGGTGAT+GGG 0.438166 1_3:-42827523 None:intergenic
AATAGTGGTACCATAGACTA+TGG 0.450341 1_3:+42836574 Msa0119170:CDS
TTAACTACTTTGACAAAGAT+GGG 0.451171 1_3:+42836662 Msa0119170:CDS
TGCGGTGATGGGGAAACAAC+CGG 0.465818 1_3:-42827464 None:intergenic
TCATCTAAACAAGGTTCAAA+AGG 0.474233 1_3:+42836618 Msa0119170:CDS
GGCCATCCTTGGGTTCAGGT+TGG 0.477994 1_3:+42835858 Msa0119170:intron
CTGTCCGAGGAGGAAATTGC+AGG 0.481109 1_3:+42836233 Msa0119170:CDS
TTTGCACTTTCAGATATACT+TGG 0.486202 1_3:-42835257 None:intergenic
AAGTCCTGCAATTTCCTCCT+CGG 0.494533 1_3:-42836237 None:intergenic
GAATGTGATGTATGGAGCGC+TGG 0.498768 1_3:+42835023 Msa0119170:CDS
ATGAAAATTTGGCGCAACAA+GGG 0.514482 1_3:+42827648 Msa0119170:CDS
ACGGTCAAGAATGTGATGTA+TGG 0.516411 1_3:+42835015 Msa0119170:CDS
CAGGCAGACGTTGATAATAG+TGG 0.517313 1_3:+42836559 Msa0119170:intron
AGGGGATACATCTTCTCCTC+AGG 0.521732 1_3:+42827667 Msa0119170:CDS
TTCCAAAGCTATAAAAGCCT+CGG 0.531800 1_3:-42827582 None:intergenic
TTCTCGAGTGATTCTTGCTG+CGG 0.540836 1_3:-42827530 None:intergenic
GATGAAAATTTGGCGCAACA+AGG 0.548837 1_3:+42827647 Msa0119170:CDS
TGAAAATTTGGCGCAACAAG+GGG 0.553383 1_3:+42827649 Msa0119170:CDS
TTGACTTTATTTCTGATCCG+TGG 0.553882 1_3:+42835234 Msa0119170:CDS
ATATTTGAGCAAGTATTGAA+AGG 0.556312 1_3:+42835206 Msa0119170:CDS
TGATTCTTGCTGCGGTGATG+GGG 0.557844 1_3:-42827522 None:intergenic
ATCATTTATATTCTACTCAG+TGG 0.559649 1_3:+42835050 Msa0119170:CDS
GATAAGACAGCGGAGTCAAG+CGG 0.571129 1_3:-42835900 None:intergenic
TACTTTGACAAAGATGGGAG+TGG 0.576026 1_3:+42836667 Msa0119170:CDS
AACCTTGTTTAGATGAAGCA+TGG 0.582578 1_3:-42836611 None:intergenic
CAATTGTTGCTGCGGTGATG+GGG 0.584318 1_3:-42827474 None:intergenic
CTCCAACCTGAACCCAAGGA+TGG 0.586807 1_3:-42835860 None:intergenic
ATTGGAAACACATCCAGAGC+CGG 0.594976 1_3:+42827493 Msa0119170:CDS
GAGACATTTACTGATGTGGT+TGG 0.599894 1_3:+42834951 Msa0119170:CDS
CTTCAGGAGCAACATAGTAT+GGG 0.604517 1_3:-42834977 None:intergenic
ACACCTCCAACCTGAACCCA+AGG 0.608665 1_3:-42835864 None:intergenic
CTTTCAGATATACTTGGCCA+CGG 0.608736 1_3:-42835251 None:intergenic
TAGAGTTAGCTAATGCCTGA+AGG 0.609380 1_3:-42837048 None:intergenic
GCAGCAAGAATCACTCGAGA+AGG 0.612221 1_3:+42827532 Msa0119170:CDS
TCTAAACAAGGTTCAAAAGG+AGG 0.612349 1_3:+42836621 Msa0119170:CDS
TTCTCACCATCCCAAAATGG+TGG 0.617259 1_3:-42835077 None:intergenic
AGTGGAAAAGCATTCAGAGC+CGG 0.622815 1_3:+42827445 None:intergenic
AAGTATATCTGAAAGTGCAA+AGG 0.624329 1_3:+42835259 Msa0119170:CDS
GATTCTTGCTGCGGTGATGG+GGG 0.634384 1_3:-42827521 None:intergenic
AATGTGATGTATGGAGCGCT+GGG 0.634532 1_3:+42835024 Msa0119170:CDS
TGCTGAAAATCTGTCCGAGG+AGG 0.642777 1_3:+42836223 Msa0119170:CDS
AATCAACTGGTTAATGCAAG+CGG 0.643760 1_3:+42836364 Msa0119170:CDS
TGTGTTTCCAATTGTTGCTG+CGG 0.650143 1_3:-42827482 None:intergenic
TTTGTATCAGAAACTGAGCA+AGG 0.651514 1_3:+42835182 Msa0119170:intron
AGGTGAGACATTTACTGATG+TGG 0.652823 1_3:+42834947 Msa0119170:CDS
TTATAAGGGATCCTAAGAAG+AGG 0.653226 1_3:+42835300 Msa0119170:CDS
ATCAGTAAATGTCTCACCTG+TGG 0.653998 1_3:-42834943 None:intergenic
GGATCCTAAGAAGAGGATGA+CGG 0.662976 1_3:+42835307 Msa0119170:CDS
GTACTGGATACTCACTCGAA+TGG 0.664998 1_3:-42835967 None:intergenic
AGCCATGCTTCATCTAAACA+AGG 0.679512 1_3:+42836609 Msa0119170:CDS
AATTGCTGAAAATCTGTCCG+AGG 0.689428 1_3:+42836220 Msa0119170:CDS
ATGATAGACACAGATAATAG+CGG 0.693651 1_3:+42836275 Msa0119170:CDS
TGGGAGTGGATACATTACAA+AGG 0.697675 1_3:+42836681 Msa0119170:CDS
GCAAAACAACACATCAACCG+AGG 0.704004 1_3:+42827565 Msa0119170:CDS
CTTCAAACGAGATAAGACAG+CGG 0.794683 1_3:-42835910 None:intergenic
ATGTGATGTATGGAGCGCTG+GGG 0.809999 1_3:+42835025 Msa0119170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATAAAATTTTAGAGTT+TGG + chr1_3:42828331-42828350 Msa0119170:intron 10.0%
!!! TTATTTTTTTTTTTTAAGCA+AGG - chr1_3:42828432-42828451 None:intergenic 10.0%
!! TAAGTTAATAATTTATAACA+TGG + chr1_3:42829450-42829469 Msa0119170:intron 10.0%
!!! TGTATAAAATGAATTTTTAA+AGG + chr1_3:42829586-42829605 Msa0119170:intron 10.0%
!!! TTTGTTCAAAATATTAATTT+TGG - chr1_3:42834531-42834550 None:intergenic 10.0%
!!! TTTTAAATGATAATCATAAT+TGG + chr1_3:42835788-42835807 Msa0119170:intron 10.0%
!! AAAAAATATATACAAGAAGA+GGG - chr1_3:42828304-42828323 None:intergenic 15.0%
!!! ATAAGATAAACATAATTTGT+TGG - chr1_3:42828815-42828834 None:intergenic 15.0%
!!! ATTACAGAAAAATTTGTTAA+AGG + chr1_3:42828905-42828924 Msa0119170:intron 15.0%
!!! TTACAGAAAAATTTGTTAAA+GGG + chr1_3:42828906-42828925 Msa0119170:intron 15.0%
!! TTTCTTTATATATATACTAG+CGG + chr1_3:42828979-42828998 Msa0119170:intron 15.0%
!! CTATAATAATGTTATATTGT+TGG - chr1_3:42829206-42829225 None:intergenic 15.0%
!! CAACAATATAACATTATTAT+AGG + chr1_3:42829204-42829223 Msa0119170:intron 15.0%
!!! TTATAGGAAAATTTGTTTAA+AGG + chr1_3:42829220-42829239 Msa0119170:intron 15.0%
!! TTTATCAATTTCATGAAAAT+GGG - chr1_3:42832774-42832793 None:intergenic 15.0%
!! ATTTATCAATTTCATGAAAA+TGG - chr1_3:42832775-42832794 None:intergenic 15.0%
!! ATTAATAAGAACAATAATGT+TGG - chr1_3:42833799-42833818 None:intergenic 15.0%
!!! TTATGTATTGATTTGAAATT+TGG + chr1_3:42834304-42834323 Msa0119170:intron 15.0%
!!! TAATATTTTGAACAAAGTAA+AGG + chr1_3:42834535-42834554 Msa0119170:intron 15.0%
!!! TTCATATTTTATTAAGTACT+AGG + chr1_3:42834616-42834635 Msa0119170:intron 15.0%
!!! AAAGAAGTTGATTATTATAA+CGG + chr1_3:42834708-42834727 Msa0119170:intron 15.0%
!!! TTTTGCTTTTTCTTTATTTT+GGG + chr1_3:42834878-42834897 Msa0119170:intron 15.0%
!! AAATTGATGTTAGATAAATA+AGG - chr1_3:42836814-42836833 None:intergenic 15.0%
!! AAAAATATATACAAGAAGAG+GGG - chr1_3:42828303-42828322 None:intergenic 20.0%
!! GAAAAAATATATACAAGAAG+AGG - chr1_3:42828305-42828324 None:intergenic 20.0%
!!! AATAAAATTTTAGAGTTTGG+CGG + chr1_3:42828334-42828353 Msa0119170:intron 20.0%
!! AATAAAAAAAACGGAAAAAC+GGG - chr1_3:42828662-42828681 None:intergenic 20.0%
!! CAATAAAAAAAACGGAAAAA+CGG - chr1_3:42828663-42828682 None:intergenic 20.0%
!! CGTTAACACAATAAAAAAAA+CGG - chr1_3:42828671-42828690 None:intergenic 20.0%
!! CTGTAATAATGTTATATTGT+TGG - chr1_3:42828892-42828911 None:intergenic 20.0%
!!! TAAAGAAAATAGAGTCTTTT+GGG - chr1_3:42828959-42828978 None:intergenic 20.0%
!!! ATAAAGAAAATAGAGTCTTT+TGG - chr1_3:42828960-42828979 None:intergenic 20.0%
!!! AATTTGTTTAAAGGTATATC+TGG + chr1_3:42829229-42829248 Msa0119170:intron 20.0%
!!! AATTTTAGCATTTTAGCATA+AGG + chr1_3:42829493-42829512 Msa0119170:intron 20.0%
!! AAAATAAATCTAGCGAAAAT+CGG - chr1_3:42832162-42832181 None:intergenic 20.0%
!!! GTAGTAATCATTTTATTTAC+CGG + chr1_3:42832403-42832422 Msa0119170:intron 20.0%
!! ATTTCACATTTCATTTCATT+TGG + chr1_3:42832585-42832604 Msa0119170:intron 20.0%
!! TTTCACATTTCATTTCATTT+GGG + chr1_3:42832586-42832605 Msa0119170:intron 20.0%
!!! AAGAAACATTTTAGAAGTAT+TGG - chr1_3:42833448-42833467 None:intergenic 20.0%
!!! ATACTTCTAAAATGTTTCTT+TGG + chr1_3:42833448-42833467 Msa0119170:intron 20.0%
!! AATGATAAAACAAATATACC+TGG - chr1_3:42833773-42833792 None:intergenic 20.0%
!! TTAGTTGAATGAAAATATGA+TGG + chr1_3:42833818-42833837 Msa0119170:intron 20.0%
!! AATTATATTAAACAAGTTCG+AGG + chr1_3:42834142-42834161 Msa0119170:intron 20.0%
!!! TTGATTTGAAATTTGGAATA+TGG + chr1_3:42834311-42834330 Msa0119170:intron 20.0%
!! ATGAATAAAAGTAATTACGA+GGG - chr1_3:42834504-42834523 None:intergenic 20.0%
!!! TATGAAATTAGCTTTCATTA+CGG - chr1_3:42834602-42834621 None:intergenic 20.0%
!! AGAATTTAAGTCATATACAT+AGG + chr1_3:42834772-42834791 Msa0119170:intron 20.0%
!!! CTTTTGCTTTTTCTTTATTT+TGG + chr1_3:42834877-42834896 Msa0119170:intron 20.0%
!! TCTAATCTTAAAATACTGAT+GGG - chr1_3:42835992-42836011 None:intergenic 20.0%
!! TTCTAATCTTAAAATACTGA+TGG - chr1_3:42835993-42836012 None:intergenic 20.0%
!! TTATATATCAAGTCATCATT+TGG - chr1_3:42837081-42837100 None:intergenic 20.0%
! TCCAAATGATTCTGTTATAT+TGG + chr1_3:42828061-42828080 Msa0119170:intron 25.0%
! TCCAATATAACAGAATCATT+TGG - chr1_3:42828065-42828084 None:intergenic 25.0%
! ATGTGATTCAAAGTTCTATT+TGG + chr1_3:42828127-42828146 Msa0119170:intron 25.0%
! TATTTGGTTAGATACTCTTT+CGG + chr1_3:42828143-42828162 Msa0119170:intron 25.0%
! AAAATATATACAAGAAGAGG+GGG - chr1_3:42828302-42828321 None:intergenic 25.0%
!!! TTTTTTTAAGCAAGGAGTAA+TGG - chr1_3:42828424-42828443 None:intergenic 25.0%
! AAACAATTTACTGAAACTAG+TGG + chr1_3:42828617-42828636 Msa0119170:intron 25.0%
!! AATAAAAAGAGCATATAGAC+GGG - chr1_3:42829022-42829041 None:intergenic 25.0%
!! CAATAAAAAGAGCATATAGA+CGG - chr1_3:42829023-42829042 None:intergenic 25.0%
!! TAAAGGAGATATGAGATTTT+GGG - chr1_3:42829272-42829291 None:intergenic 25.0%
!! ATAAAGGAGATATGAGATTT+TGG - chr1_3:42829273-42829292 None:intergenic 25.0%
! AAGTTATTTAACGACTGTAT+TGG + chr1_3:42829641-42829660 Msa0119170:intron 25.0%
!! TAGAATATTTCATCCTTTTC+TGG + chr1_3:42829734-42829753 Msa0119170:intron 25.0%
!! GGTGTTTATAGATGATATTT+TGG + chr1_3:42829770-42829789 Msa0119170:intron 25.0%
!!! TAAGGGTTTTGATTCTATTT+GGG + chr1_3:42831099-42831118 Msa0119170:intron 25.0%
! TTGTAAGTAAACTCAATCAA+CGG - chr1_3:42831442-42831461 None:intergenic 25.0%
!! AACAGTTTTCATTCTAGTAT+CGG + chr1_3:42831463-42831482 Msa0119170:intron 25.0%
! AAATAAATCTAGCGAAAATC+GGG - chr1_3:42832161-42832180 None:intergenic 25.0%
!!! ATTTTAGTCATTTTGGACTT+AGG + chr1_3:42832277-42832296 Msa0119170:intron 25.0%
!!! TTTTAGTCATTTTGGACTTA+GGG + chr1_3:42832278-42832297 Msa0119170:intron 25.0%
!! TAGGGGTAATTTTGTAATTT+TGG + chr1_3:42832322-42832341 Msa0119170:intron 25.0%
! ATGGTAAATTACAACACTAA+CGG - chr1_3:42832436-42832455 None:intergenic 25.0%
! TATATGTGCTCTATTCAATT+GGG - chr1_3:42832528-42832547 None:intergenic 25.0%
! ATATATGTGCTCTATTCAAT+TGG - chr1_3:42832529-42832548 None:intergenic 25.0%
! CATATATAAACTCTAGTTGT+TGG + chr1_3:42832542-42832561 Msa0119170:intron 25.0%
! AGGCTTGAATTAAATATTCT+TGG + chr1_3:42832693-42832712 Msa0119170:intron 25.0%
!!! TTAAATATTCTTGGTGTTAG+AGG + chr1_3:42832702-42832721 Msa0119170:intron 25.0%
!! TTTTTCATCAAAATTGCTCA+AGG - chr1_3:42832924-42832943 None:intergenic 25.0%
!!! AGCAATTTTGATGAAAAATG+AGG + chr1_3:42832926-42832945 Msa0119170:intron 25.0%
! TAGAATCAAAATTGTGTAAC+TGG + chr1_3:42833012-42833031 Msa0119170:intron 25.0%
!!! TTTTGATTGTTTTGAGCTTT+GGG + chr1_3:42833414-42833433 Msa0119170:intron 25.0%
!!! ACATTTTAGAAGTATTGGAT+TGG - chr1_3:42833443-42833462 None:intergenic 25.0%
!!! TTTTTGGAAAAATTGACGTT+TGG - chr1_3:42833575-42833594 None:intergenic 25.0%
!!! NNNNNNGTGTTTTTTAGACC+AGG + chr1_3:42833752-42833771 Msa0119170:intron 25.0%
!! TAAGTTGAATATGATCATCA+TGG + chr1_3:42833867-42833886 Msa0119170:intron 25.0%
! AAATAACCATAGATCATACA+AGG - chr1_3:42834083-42834102 None:intergenic 25.0%
!!! TTAGTTCTATAAACAGCAAA+TGG - chr1_3:42834124-42834143 None:intergenic 25.0%
!!! TGTAAAAGTGTTGTTAAGTT+AGG + chr1_3:42834262-42834281 Msa0119170:intron 25.0%
! CATGAATAAAAGTAATTACG+AGG - chr1_3:42834505-42834524 None:intergenic 25.0%
!! TTATTATAACGGAGGTTTAT+CGG + chr1_3:42834719-42834738 Msa0119170:intron 25.0%
! AAGATAATGTGTCTTTGATA+CGG - chr1_3:42834811-42834830 None:intergenic 25.0%
!!! CAAAAGTTTTGAACATAGTT+AGG - chr1_3:42834863-42834882 None:intergenic 25.0%
! AAAAATATATCCATTACCAC+AGG + chr1_3:42834927-42834946 Msa0119170:CDS 25.0%
! ATCATTTATATTCTACTCAG+TGG + chr1_3:42835050-42835069 Msa0119170:CDS 25.0%
!! TAATATGTGCCTAATGTTTT+TGG + chr1_3:42835157-42835176 Msa0119170:intron 25.0%
! ATACAAAGACCAAAAACATT+AGG - chr1_3:42835169-42835188 None:intergenic 25.0%
!!! ATATTTGAGCAAGTATTGAA+AGG + chr1_3:42835206-42835225 Msa0119170:CDS 25.0%
! AAAAGAAAATCTTGCATAAC+AGG - chr1_3:42835442-42835461 None:intergenic 25.0%
! AGATATAGAATTTCTCTCTT+AGG + chr1_3:42835633-42835652 Msa0119170:intron 25.0%
! AATGTTGAAGAGATAGATAT+AGG + chr1_3:42835703-42835722 Msa0119170:intron 25.0%
!!! TAGAAGTATTGCATATTACA+TGG + chr1_3:42836008-42836027 Msa0119170:intron 25.0%
! GAAACATCTAAGAATTTACA+AGG + chr1_3:42836030-42836049 Msa0119170:intron 25.0%
!! AATATTGAACATTTTGCCAA+TGG + chr1_3:42836126-42836145 Msa0119170:intron 25.0%
!! ATATTGAACATTTTGCCAAT+GGG + chr1_3:42836127-42836146 Msa0119170:intron 25.0%
!!! TCCTTTCTTCTTTAAAATTC+AGG + chr1_3:42836540-42836559 Msa0119170:intron 25.0%
! ATCTTTGTCAAAGTAGTTAA+AGG - chr1_3:42836662-42836681 None:intergenic 25.0%
! TTTAACTACTTTGACAAAGA+TGG + chr1_3:42836661-42836680 Msa0119170:CDS 25.0%
! TTAACTACTTTGACAAAGAT+GGG + chr1_3:42836662-42836681 Msa0119170:CDS 25.0%
! ATTATGTAAGTGAATGCATT+TGG + chr1_3:42837134-42837153 Msa0119170:three_prime_UTR 25.0%
TACCATTGCAGATGAAAATT+TGG + chr1_3:42827637-42827656 Msa0119170:CDS 30.0%
! TTCAAGATGGTCTTGATTTA+TGG + chr1_3:42827900-42827919 Msa0119170:intron 30.0%
! TCAAGATGGTCTTGATTTAT+GGG + chr1_3:42827901-42827920 Msa0119170:intron 30.0%
TAACAGAATCATTTGGAAGA+TGG - chr1_3:42828058-42828077 None:intergenic 30.0%
GAAAAACAAACAGAAAAAGC+TGG - chr1_3:42828257-42828276 None:intergenic 30.0%
!! TTCTGTTTGTTTTTCTTCTG+AGG + chr1_3:42828262-42828281 Msa0119170:intron 30.0%
!! TCTGTTTGTTTTTCTTCTGA+GGG + chr1_3:42828263-42828282 Msa0119170:intron 30.0%
AAATATATACAAGAAGAGGG+GGG - chr1_3:42828301-42828320 None:intergenic 30.0%
ATATATATACTAGCGGTTGA+CGG + chr1_3:42828986-42829005 Msa0119170:intron 30.0%
CTCACTTCAAAAACATACTT+AGG - chr1_3:42829993-42830012 None:intergenic 30.0%
!!! CTAAGTATGTTTTTGAAGTG+AGG + chr1_3:42829991-42830010 Msa0119170:intron 30.0%
TATTATCAGAGGTTCATTGA+AGG + chr1_3:42830035-42830054 Msa0119170:intron 30.0%
AAAAGGACAAGCTTATGTTT+GGG + chr1_3:42830097-42830116 Msa0119170:intron 30.0%
!! TATTGTGATGCTTCTAAGAT+GGG + chr1_3:42830215-42830234 Msa0119170:intron 30.0%
TTGTGTATGTGTTGAAGATT+TGG + chr1_3:42830345-42830364 Msa0119170:intron 30.0%
!! ATTTGGAGGCATTATCTATA+TGG + chr1_3:42830362-42830381 Msa0119170:intron 30.0%
!! TCTATATGGTTCTAAGTTTG+AGG + chr1_3:42830376-42830395 Msa0119170:intron 30.0%
ACAAATACTTCAAACTCTTG+TGG - chr1_3:42830412-42830431 None:intergenic 30.0%
GAAGTTGACAAGTAATATTC+TGG + chr1_3:42830664-42830683 Msa0119170:intron 30.0%
! AGTATATCAATGGACTTTGT+TGG + chr1_3:42831058-42831077 Msa0119170:intron 30.0%
!!! CTAAGGGTTTTGATTCTATT+TGG + chr1_3:42831098-42831117 Msa0119170:intron 30.0%
! CATTTTGTTCCTATTAAGAC+CGG + chr1_3:42831151-42831170 Msa0119170:intron 30.0%
! TGTTCCTTCTAGTATTTTGT+CGG + chr1_3:42831231-42831250 Msa0119170:intron 30.0%
CAAAACTTAGAAGTAAACCT+CGG - chr1_3:42831265-42831284 None:intergenic 30.0%
! GAGGTTTACTTCTAAGTTTT+GGG + chr1_3:42831264-42831283 Msa0119170:intron 30.0%
!! TTTTCATTCTAGTATCGGAA+TGG + chr1_3:42831468-42831487 Msa0119170:intron 30.0%
TTGAATCATCTTAACCTTCT+TGG - chr1_3:42831596-42831615 None:intergenic 30.0%
TCGTTCTGATTAAAGTGATT+TGG + chr1_3:42832007-42832026 Msa0119170:intron 30.0%
CGTTCTGATTAAAGTGATTT+GGG + chr1_3:42832008-42832027 Msa0119170:intron 30.0%
! AGGGCAAAAATTCTTTTTAG+TGG + chr1_3:42832119-42832138 Msa0119170:intron 30.0%
!! GGGCAAAAATTCTTTTTAGT+GGG + chr1_3:42832120-42832139 Msa0119170:intron 30.0%
!! GGCAAAAATTCTTTTTAGTG+GGG + chr1_3:42832121-42832140 Msa0119170:intron 30.0%
!! GCAAAAATTCTTTTTAGTGG+GGG + chr1_3:42832122-42832141 Msa0119170:intron 30.0%
! TTTGCATCTGTGTGTATTTT+TGG + chr1_3:42832223-42832242 Msa0119170:intron 30.0%
!!! ATCTGTGTGTATTTTTGGTT+GGG + chr1_3:42832228-42832247 Msa0119170:intron 30.0%
!!! GAAGGGTATTTTAGTCATTT+TGG + chr1_3:42832270-42832289 Msa0119170:intron 30.0%
!! TTTAGTCATTTTGGACTTAG+GGG + chr1_3:42832279-42832298 Msa0119170:intron 30.0%
!! ATTTTGGTCATTTTGAGAGT+AGG + chr1_3:42832303-42832322 Msa0119170:intron 30.0%
!! TTTTGGTCATTTTGAGAGTA+GGG + chr1_3:42832304-42832323 Msa0119170:intron 30.0%
AAATGTCACTACTCACTTAA+TGG - chr1_3:42832455-42832474 None:intergenic 30.0%
! TTAAGTGAGTAGTGACATTT+TGG + chr1_3:42832455-42832474 Msa0119170:intron 30.0%
! TAAGTGAGTAGTGACATTTT+GGG + chr1_3:42832456-42832475 Msa0119170:intron 30.0%
TTTGGGTGTTAGAATAGAAA+TGG + chr1_3:42832473-42832492 Msa0119170:intron 30.0%
TTGGGTGTTAGAATAGAAAT+GGG + chr1_3:42832474-42832493 Msa0119170:intron 30.0%
! TGTTAGAATAGAAATGGGTT+AGG + chr1_3:42832479-42832498 Msa0119170:intron 30.0%
CTTATCTCTCAAACCTTAAT+GGG - chr1_3:42832505-42832524 None:intergenic 30.0%
! TCTAGTTGTTGGTGAAAATT+AGG + chr1_3:42832553-42832572 Msa0119170:intron 30.0%
ATGTTGAAATGTGCATTTGT+GGG + chr1_3:42832888-42832907 Msa0119170:intron 30.0%
!! AACTTCCAGAAAGTGTTTAT+GGG - chr1_3:42833178-42833197 None:intergenic 30.0%
! GGTTTGAAAATTGGGATTTT+GGG + chr1_3:42833213-42833232 Msa0119170:intron 30.0%
! CAAAACAGAAAACTGTTTCT+GGG - chr1_3:42833399-42833418 None:intergenic 30.0%
TCAAAACAGAAAACTGTTTC+TGG - chr1_3:42833400-42833419 None:intergenic 30.0%
!!! GTTTTGATTGTTTTGAGCTT+TGG + chr1_3:42833413-42833432 Msa0119170:intron 30.0%
!!! TTTGATTGTTTTGAGCTTTG+GGG + chr1_3:42833415-42833434 Msa0119170:intron 30.0%
! TCGTCTAACTTTTGTGAAAA+CGG + chr1_3:42833548-42833567 Msa0119170:intron 30.0%
TCTAATCTCACTTCAATTTC+CGG - chr1_3:42833608-42833627 None:intergenic 30.0%
ATGATGGTATATTTGACATG+AGG + chr1_3:42833834-42833853 Msa0119170:intron 30.0%
TGATGGTATATTTGACATGA+GGG + chr1_3:42833835-42833854 Msa0119170:intron 30.0%
ATATTAAACAAGTTCGAGGA+TGG + chr1_3:42834146-42834165 Msa0119170:intron 30.0%
! TTTGTATTTTATCACCTCAG+CGG + chr1_3:42834663-42834682 Msa0119170:intron 30.0%
! GAAGTTGATTATTATAACGG+AGG + chr1_3:42834711-42834730 Msa0119170:intron 30.0%
! TATTATAACGGAGGTTTATC+GGG + chr1_3:42834720-42834739 Msa0119170:intron 30.0%
ACACATTATCTTGATTCACT+AGG + chr1_3:42834819-42834838 Msa0119170:intron 30.0%
CACATTATCTTGATTCACTA+GGG + chr1_3:42834820-42834839 Msa0119170:intron 30.0%
GGACAAACAATAAAATCAAG+TGG - chr1_3:42835110-42835129 None:intergenic 30.0%
! TTTTATTGTTTGTCCTAAGC+AGG + chr1_3:42835115-42835134 Msa0119170:intron 30.0%
TTTGCACTTTCAGATATACT+TGG - chr1_3:42835260-42835279 None:intergenic 30.0%
! AAGTATATCTGAAAGTGCAA+AGG + chr1_3:42835259-42835278 Msa0119170:CDS 30.0%
TTGTTCGAAGAATGCTTATA+AGG + chr1_3:42835285-42835304 Msa0119170:CDS 30.0%
TGTTCGAAGAATGCTTATAA+GGG + chr1_3:42835286-42835305 Msa0119170:CDS 30.0%
! ATTCTTGATGACAGATTATC+TGG + chr1_3:42835477-42835496 Msa0119170:intron 30.0%
!!! AGAACTTTTTCATTTAACCC+TGG + chr1_3:42835557-42835576 Msa0119170:intron 30.0%
!!! GAACTTTTTCATTTAACCCT+GGG + chr1_3:42835558-42835577 Msa0119170:intron 30.0%
AATATTAAGAGAGAATGCCT+AGG - chr1_3:42835676-42835695 None:intergenic 30.0%
AGTTATGATTGATCATTTGC+AGG + chr1_3:42835837-42835856 Msa0119170:intron 30.0%
ACTTTCTGTATTATATCCCT+TGG + chr1_3:42836192-42836211 Msa0119170:intron 30.0%
ATGATAGACACAGATAATAG+CGG + chr1_3:42836275-42836294 Msa0119170:CDS 30.0%
ACTCTTGAAGAACTGAAAAA+TGG + chr1_3:42836305-42836324 Msa0119170:CDS 30.0%
AAAAATGGCTTAGAAAGAGT+TGG + chr1_3:42836320-42836339 Msa0119170:CDS 30.0%
!! TTAAGGATTCTGAAATCAAC+TGG + chr1_3:42836351-42836370 Msa0119170:CDS 30.0%
TGAACATAGAACTGACAATT+TGG - chr1_3:42836408-42836427 None:intergenic 30.0%
GAACACAACATAAAAGTCTA+GGG - chr1_3:42836475-42836494 None:intergenic 30.0%
! AAAATGTATCGATCATTCAG+CGG - chr1_3:42836497-42836516 None:intergenic 30.0%
!! GCCTGAATTTTAAAGAAGAA+AGG - chr1_3:42836544-42836563 None:intergenic 30.0%
TATGAATTCACCATAGTCTA+TGG - chr1_3:42836587-42836606 None:intergenic 30.0%
TCATCTAAACAAGGTTCAAA+AGG + chr1_3:42836618-42836637 Msa0119170:CDS 30.0%
AAGAAAGAAAGAAGTAGGAA+AGG - chr1_3:42836854-42836873 None:intergenic 30.0%
! TTGAATTTTGCACTGTTTTC+AGG + chr1_3:42836930-42836949 Msa0119170:intron 30.0%
TTCCAAAGCTATAAAAGCCT+CGG - chr1_3:42827585-42827604 None:intergenic 35.0%
ATGAAAATTTGGCGCAACAA+GGG + chr1_3:42827648-42827667 Msa0119170:CDS 35.0%
! ACAGAATTCACATTTTCCTG+AGG - chr1_3:42827686-42827705 None:intergenic 35.0%
TGAAGCTACTTACACATTTG+AGG + chr1_3:42827718-42827737 Msa0119170:intron 35.0%
!! AACACATGTAAAGAAGTGCT+AGG - chr1_3:42827782-42827801 None:intergenic 35.0%
CACTTCTTTACATGTGTTAG+AGG + chr1_3:42827784-42827803 Msa0119170:intron 35.0%
! TAACATGTTGTTGTACTGGT+GGG - chr1_3:42827871-42827890 None:intergenic 35.0%
TTGCTAACATGTTGTTGTAC+TGG - chr1_3:42827875-42827894 None:intergenic 35.0%
GTTAGCAAGAACATTCAAGA+TGG + chr1_3:42827887-42827906 Msa0119170:intron 35.0%
TTGATCATATTCACGGATTC+TGG - chr1_3:42827927-42827946 None:intergenic 35.0%
CCATTCGTTGATCATATTCA+CGG - chr1_3:42827934-42827953 None:intergenic 35.0%
TGCGGACAAATTGACAAATA+TGG + chr1_3:42828101-42828120 Msa0119170:intron 35.0%
GCGGACAAATTGACAAATAT+GGG + chr1_3:42828102-42828121 Msa0119170:intron 35.0%
!! TGTTTTTCTTCTGAGGGTTT+TGG + chr1_3:42828269-42828288 Msa0119170:intron 35.0%
TATATATACTAGCGGTTGAC+GGG + chr1_3:42828987-42829006 Msa0119170:intron 35.0%
! AGTGATGACTTCAGTTTTCA+TGG - chr1_3:42829563-42829582 None:intergenic 35.0%
AGTTATTCTGTGATGCCATT+TGG + chr1_3:42829672-42829691 Msa0119170:intron 35.0%
! CTTTAGAAATCACATGACCA+AGG - chr1_3:42829917-42829936 None:intergenic 35.0%
CTTGGTCATGTGATTTCTAA+AGG + chr1_3:42829915-42829934 Msa0119170:intron 35.0%
CATTGAAGGATTCTCTAAGT+TGG + chr1_3:42830049-42830068 Msa0119170:intron 35.0%
GAAAAGGACAAGCTTATGTT+TGG + chr1_3:42830096-42830115 Msa0119170:intron 35.0%
TCAACATCTTCTTCAACTCT+TGG - chr1_3:42830145-42830164 None:intergenic 35.0%
! GTATTGTGATGCTTCTAAGA+TGG + chr1_3:42830214-42830233 Msa0119170:intron 35.0%
GCTAATTCCAAATCATGAGT+CGG - chr1_3:42830320-42830339 None:intergenic 35.0%
! GACTCATGATTTGGAATTAG+CGG + chr1_3:42830319-42830338 Msa0119170:intron 35.0%
TGTATGTGTTGAAGATTTGG+AGG + chr1_3:42830348-42830367 Msa0119170:intron 35.0%
! GAAGTATTTGTTTGACCAGA+AGG + chr1_3:42830421-42830440 Msa0119170:intron 35.0%
! GAGATGGTTGAAGTATCTTA+AGG + chr1_3:42830463-42830482 Msa0119170:intron 35.0%
ATTGCATATGTCTGCTTTGA+TGG + chr1_3:42830556-42830575 Msa0119170:intron 35.0%
TTTGGTTAGTGAATTGACAC+CGG + chr1_3:42830619-42830638 Msa0119170:intron 35.0%
GTTGACAAGTAATATTCTGG+AGG + chr1_3:42830667-42830686 Msa0119170:intron 35.0%
AGTAGTTTGAGTATTCATCC+CGG + chr1_3:42830866-42830885 Msa0119170:intron 35.0%
AGATGTATCAGGATTTGAAG+AGG + chr1_3:42830897-42830916 Msa0119170:intron 35.0%
! AGGATTTGAAGAGGTTGTTT+TGG + chr1_3:42830906-42830925 Msa0119170:intron 35.0%
!!! ATTTGAAGAGGTTGTTTTGG+TGG + chr1_3:42830909-42830928 Msa0119170:intron 35.0%
AGAGTTTGTCTATGCTTGTT+TGG + chr1_3:42830955-42830974 Msa0119170:intron 35.0%
GAAGTGGGATAGTATATCAA+TGG + chr1_3:42831048-42831067 Msa0119170:intron 35.0%
CTATTTGGGTGATTGTTGAT+CGG + chr1_3:42831113-42831132 Msa0119170:intron 35.0%
! CTTCTAGTATTTTGTCGGAT+CGG + chr1_3:42831236-42831255 Msa0119170:intron 35.0%
! TTCTAGTATTTTGTCGGATC+GGG + chr1_3:42831237-42831256 Msa0119170:intron 35.0%
! CGAGGTTTACTTCTAAGTTT+TGG + chr1_3:42831263-42831282 Msa0119170:intron 35.0%
AGAAGAGTTATCACGATAAG+AGG + chr1_3:42831644-42831663 Msa0119170:intron 35.0%
AAAGACATCGAGTTTCATGT+TGG + chr1_3:42831670-42831689 Msa0119170:intron 35.0%
!!! ACCTTTTGAGATTGTTGAGA+AGG + chr1_3:42831777-42831796 Msa0119170:intron 35.0%
ACCTTCTCAACAATCTCAAA+AGG - chr1_3:42831781-42831800 None:intergenic 35.0%
! TTTGAGATTGTTGAGAAGGT+TGG + chr1_3:42831781-42831800 Msa0119170:intron 35.0%
TTGAGATTGTTGAGAAGGTT+GGG + chr1_3:42831782-42831801 Msa0119170:intron 35.0%
TCATGAAGATTCGACAAAGA+TGG - chr1_3:42831835-42831854 None:intergenic 35.0%
ATCATCCACTTGAATCACAT+GGG - chr1_3:42831902-42831921 None:intergenic 35.0%
AATCATCCACTTGAATCACA+TGG - chr1_3:42831903-42831922 None:intergenic 35.0%
TGTGATTCAAGTGGATGATT+TGG + chr1_3:42831903-42831922 Msa0119170:intron 35.0%
! AAGTGGATGATTTGGAAGTA+AGG + chr1_3:42831911-42831930 Msa0119170:intron 35.0%
! AGTGGATGATTTGGAAGTAA+GGG + chr1_3:42831912-42831931 Msa0119170:intron 35.0%
ATAATTTGACCGTTGAGACT+TGG + chr1_3:42831935-42831954 Msa0119170:intron 35.0%
! CTGATTAAAGTGATTTGGGT+TGG + chr1_3:42832012-42832031 Msa0119170:intron 35.0%
! TTTCCTTCAGGTAATTTTCG+AGG + chr1_3:42832099-42832118 Msa0119170:intron 35.0%
! TTCCTTCAGGTAATTTTCGA+GGG + chr1_3:42832100-42832119 Msa0119170:intron 35.0%
!!! CATCTGTGTGTATTTTTGGT+TGG + chr1_3:42832227-42832246 Msa0119170:intron 35.0%
TGGTTGGGAATTGTAGAATT+CGG + chr1_3:42832243-42832262 Msa0119170:intron 35.0%
!! ATTGTAGAATTCGGTGTAGA+AGG + chr1_3:42832252-42832271 Msa0119170:intron 35.0%
!! TTGTAGAATTCGGTGTAGAA+GGG + chr1_3:42832253-42832272 Msa0119170:intron 35.0%
!! TTTGGTCATTTTGAGAGTAG+GGG + chr1_3:42832305-42832324 Msa0119170:intron 35.0%
GCTTATCTCTCAAACCTTAA+TGG - chr1_3:42832506-42832525 None:intergenic 35.0%
ATCATCTAGGAGCTAAATTG+AGG + chr1_3:42832673-42832692 Msa0119170:intron 35.0%
!! TATTCTTGGTGTTAGAGGTA+AGG + chr1_3:42832707-42832726 Msa0119170:intron 35.0%
!! ATTCTTGGTGTTAGAGGTAA+GGG + chr1_3:42832708-42832727 Msa0119170:intron 35.0%
CATGTTGAAATGTGCATTTG+TGG + chr1_3:42832887-42832906 Msa0119170:intron 35.0%
GTAACTGGAATCGTTGTTTA+TGG + chr1_3:42833027-42833046 Msa0119170:intron 35.0%
TCGTTGTTTATGGATTCATG+AGG + chr1_3:42833037-42833056 Msa0119170:intron 35.0%
AAGTGTTTATGGGTCAAAAC+AGG - chr1_3:42833168-42833187 None:intergenic 35.0%
TTTGACCCATAAACACTTTC+TGG + chr1_3:42833170-42833189 Msa0119170:intron 35.0%
!! CAACTTCCAGAAAGTGTTTA+TGG - chr1_3:42833179-42833198 None:intergenic 35.0%
! ACACTTTCTGGAAGTTGATT+TGG + chr1_3:42833182-42833201 Msa0119170:intron 35.0%
! CACTTTCTGGAAGTTGATTT+GGG + chr1_3:42833183-42833202 Msa0119170:intron 35.0%
! GGGTTTGAAAATTGGGATTT+TGG + chr1_3:42833212-42833231 Msa0119170:intron 35.0%
! ATTGGGATTTTGGGCAAAAA+TGG + chr1_3:42833222-42833241 Msa0119170:intron 35.0%
CGAAATTTCTCAGAAGTTTC+GGG - chr1_3:42833256-42833275 None:intergenic 35.0%
GCGAAATTTCTCAGAAGTTT+CGG - chr1_3:42833257-42833276 None:intergenic 35.0%
TCTGAGAAATTTCGCAAGAA+CGG + chr1_3:42833262-42833281 Msa0119170:intron 35.0%
!!! TTGATTGTTTTGAGCTTTGG+GGG + chr1_3:42833416-42833435 Msa0119170:intron 35.0%
! GTAGGATTAAAGGTGTAAAC+AGG - chr1_3:42833486-42833505 None:intergenic 35.0%
GTTTACACCTTTAATCCTAC+TGG + chr1_3:42833486-42833505 Msa0119170:intron 35.0%
TCTTGTTCCAGTAGGATTAA+AGG - chr1_3:42833496-42833515 None:intergenic 35.0%
AACTCAAATCTTGTTCCAGT+AGG - chr1_3:42833504-42833523 None:intergenic 35.0%
TACTGGAACAAGATTTGAGT+TGG + chr1_3:42833503-42833522 Msa0119170:intron 35.0%
!! GAACAAGATTTGAGTTGGTT+TGG + chr1_3:42833508-42833527 Msa0119170:intron 35.0%
! TTCCAAAAACTCGTTTTCTC+CGG + chr1_3:42833586-42833605 Msa0119170:intron 35.0%
GTATATTTGACATGAGGGAT+TGG + chr1_3:42833840-42833859 Msa0119170:intron 35.0%
TATGATCATCATGGAATGCT+AGG + chr1_3:42833876-42833895 Msa0119170:intron 35.0%
AGGTAAAGCTCTCTAATCAA+AGG - chr1_3:42833990-42834009 None:intergenic 35.0%
AGAGCTTTACCTATAAGACT+GGG + chr1_3:42833998-42834017 Msa0119170:intron 35.0%
CATACAAGGCAAAACTACAA+AGG - chr1_3:42834069-42834088 None:intergenic 35.0%
! GTTTTGCCTTGTATGATCTA+TGG + chr1_3:42834074-42834093 Msa0119170:intron 35.0%
ATGGAAGAGAGACATAGAAA+TGG + chr1_3:42834172-42834191 Msa0119170:intron 35.0%
AGTGAGAGATGTTATTGTGA+AGG + chr1_3:42834206-42834225 Msa0119170:intron 35.0%
GTGAGAGATGTTATTGTGAA+GGG + chr1_3:42834207-42834226 Msa0119170:intron 35.0%
AGATGGTGAAGAAAAAATGC+AGG - chr1_3:42834477-42834496 None:intergenic 35.0%
!!! TGCATTTTTTCTTCACCATC+TGG + chr1_3:42834476-42834495 Msa0119170:intron 35.0%
! TTGTATTTTATCACCTCAGC+GGG + chr1_3:42834664-42834683 Msa0119170:intron 35.0%
! ATGTTGCTCCTGAAGTTTTA+CGG + chr1_3:42834985-42835004 Msa0119170:CDS 35.0%
TAGTTCTTCCGTAAAACTTC+AGG - chr1_3:42834996-42835015 None:intergenic 35.0%
! GAAGTTTTACGGAAGAACTA+CGG + chr1_3:42834996-42835015 Msa0119170:CDS 35.0%
AGACATAACTAATCCTGCTT+AGG - chr1_3:42835131-42835150 None:intergenic 35.0%
TTTGTATCAGAAACTGAGCA+AGG + chr1_3:42835182-42835201 Msa0119170:intron 35.0%
!! TTGACTTTATTTCTGATCCG+TGG + chr1_3:42835234-42835253 Msa0119170:CDS 35.0%
TTATAAGGGATCCTAAGAAG+AGG + chr1_3:42835300-42835319 Msa0119170:CDS 35.0%
AACAGGACATATTAGATCTC+TGG - chr1_3:42835425-42835444 None:intergenic 35.0%
ATGACAGATTATCTGGTTAG+TGG + chr1_3:42835484-42835503 Msa0119170:intron 35.0%
! TTTTTCATTTAACCCTGGGA+AGG + chr1_3:42835562-42835581 Msa0119170:intron 35.0%
AGCATGGTTCTTGTTGAATA+CGG + chr1_3:42835600-42835619 Msa0119170:intron 35.0%
AGATATAGGATTCTCAGAAC+TGG + chr1_3:42835717-42835736 Msa0119170:intron 35.0%
! CTTAAAATACTGATGGGTAC+TGG - chr1_3:42835986-42836005 None:intergenic 35.0%
AATCAACTGGTTAATGCAAG+CGG + chr1_3:42836364-42836383 Msa0119170:CDS 35.0%
GGAACACAACATAAAAGTCT+AGG - chr1_3:42836476-42836495 None:intergenic 35.0%
AATAGTGGTACCATAGACTA+TGG + chr1_3:42836574-42836593 Msa0119170:CDS 35.0%
! AACCTTGTTTAGATGAAGCA+TGG - chr1_3:42836614-42836633 None:intergenic 35.0%
TCTAAACAAGGTTCAAAAGG+AGG + chr1_3:42836621-42836640 Msa0119170:CDS 35.0%
CATCTAGATGATCATCTTGT+AGG - chr1_3:42836738-42836757 None:intergenic 35.0%
TGCGAAAGAAAGAAAGAAGT+AGG - chr1_3:42836859-42836878 None:intergenic 35.0%
!! ATTTTGCACTGTTTTCAGGA+TGG + chr1_3:42836934-42836953 Msa0119170:intron 35.0%
!!! ATGATGCAAGACACTGATTT+TGG + chr1_3:42836985-42837004 Msa0119170:CDS 35.0%
!!! AGACACTGATTTTGGCAAAA+AGG + chr1_3:42836993-42837012 Msa0119170:CDS 35.0%
!!! GACACTGATTTTGGCAAAAA+GGG + chr1_3:42836994-42837013 Msa0119170:CDS 35.0%
!!! ACACTGATTTTGGCAAAAAG+GGG + chr1_3:42836995-42837014 Msa0119170:CDS 35.0%
GAAAAACTATGAATGCCTTC+AGG + chr1_3:42837033-42837052 Msa0119170:three_prime_UTR 35.0%
TGTGTTTCCAATTGTTGCTG+CGG - chr1_3:42827485-42827504 None:intergenic 40.0%
!!! GTTGATGTGTTGTTTTGCTC+GGG - chr1_3:42827563-42827582 None:intergenic 40.0%
!!! GGTTGATGTGTTGTTTTGCT+CGG - chr1_3:42827564-42827583 None:intergenic 40.0%
! AACCGAGGCTTTTATAGCTT+TGG + chr1_3:42827580-42827599 Msa0119170:CDS 40.0%
! CGCCAAATTTTCATCTGCAA+TGG - chr1_3:42827642-42827661 None:intergenic 40.0%
GATGAAAATTTGGCGCAACA+AGG + chr1_3:42827647-42827666 Msa0119170:CDS 40.0%
TGAAAATTTGGCGCAACAAG+GGG + chr1_3:42827649-42827668 Msa0119170:CDS 40.0%
ACATGTGTTAGAGGAGATAG+AGG + chr1_3:42827793-42827812 Msa0119170:intron 40.0%
CTAACATGTTGTTGTACTGG+TGG - chr1_3:42827872-42827891 None:intergenic 40.0%
CCGTGAATATGATCAACGAA+TGG + chr1_3:42827931-42827950 Msa0119170:intron 40.0%
CTTCACTCAAGTTCTTACCA+AGG + chr1_3:42827964-42827983 Msa0119170:intron 40.0%
!!! ATTTTAGAGTTTGGCGGCAT+AGG + chr1_3:42828340-42828359 Msa0119170:intron 40.0%
! TACCAACTAGGTTGGCATTT+GGG - chr1_3:42828376-42828395 None:intergenic 40.0%
! ATACCAACTAGGTTGGCATT+TGG - chr1_3:42828377-42828396 None:intergenic 40.0%
!! GGAGATATGAGATTTTGGGT+TGG - chr1_3:42829268-42829287 None:intergenic 40.0%
! TCCTTTTCTGGATCGTTTTG+TGG + chr1_3:42829746-42829765 Msa0119170:intron 40.0%
ACCACAAAACGATCCAGAAA+AGG - chr1_3:42829750-42829769 None:intergenic 40.0%
! TTTTCTGGATCGTTTTGTGG+TGG + chr1_3:42829749-42829768 Msa0119170:intron 40.0%
GGTGTATTCTAAGTCTGAAG+AGG + chr1_3:42829791-42829810 Msa0119170:intron 40.0%
CAACACAATCCTCAAATGCT+CGG - chr1_3:42829823-42829842 None:intergenic 40.0%
GAGCATTTGAGGATTGTGTT+GGG + chr1_3:42829822-42829841 Msa0119170:intron 40.0%
! AGTTGTCCAAGTGTGAGTTT+TGG + chr1_3:42829874-42829893 Msa0119170:intron 40.0%
!!! CAAGTGTGAGTTTTGGTTGT+GGG + chr1_3:42829881-42829900 Msa0119170:intron 40.0%
! GGTCATGTGATTTCTAAAGG+TGG + chr1_3:42829918-42829937 Msa0119170:intron 40.0%
! GATTTCTAAAGGTGGCATTG+CGG + chr1_3:42829926-42829945 Msa0119170:intron 40.0%
! TTTGAAGTGAGGAGCTTTCT+TGG + chr1_3:42830002-42830021 Msa0119170:intron 40.0%
GATTGGCAGGTTATTATCAG+AGG + chr1_3:42830024-42830043 Msa0119170:intron 40.0%
ACAAACGATTCCTTCGGATT+CGG - chr1_3:42830191-42830210 None:intergenic 40.0%
TACACCACAAACGATTCCTT+CGG - chr1_3:42830197-42830216 None:intergenic 40.0%
GAACTATCCGACTCATGATT+TGG + chr1_3:42830310-42830329 Msa0119170:intron 40.0%
ACCAGAAGGAGTTGAATATG+AGG + chr1_3:42830435-42830454 Msa0119170:intron 40.0%
TTCCAGTTGAGTTATCATCC+TGG + chr1_3:42830494-42830513 Msa0119170:intron 40.0%
TTCCAGGATGATAACTCAAC+TGG - chr1_3:42830499-42830518 None:intergenic 40.0%
GTTGAGTTATCATCCTGGAA+AGG + chr1_3:42830499-42830518 Msa0119170:intron 40.0%
! CAAAGCATCAGCAACAACAT+TGG - chr1_3:42830525-42830544 None:intergenic 40.0%
! TTGTTGCTGATGCTTTGAGT+AGG + chr1_3:42830528-42830547 Msa0119170:intron 40.0%
! GCAGTTTCGAGATTTGAGTT+TGG + chr1_3:42830601-42830620 Msa0119170:intron 40.0%
! ATTCTGGAGGAGATCAAGAA+TGG + chr1_3:42830680-42830699 Msa0119170:intron 40.0%
! TCAGAAGGAGGATTTAGAAC+TGG + chr1_3:42830703-42830722 Msa0119170:intron 40.0%
! TTTAGAACTGGTTGATCGTG+TGG + chr1_3:42830715-42830734 Msa0119170:intron 40.0%
!! GTGTTGGTTAACCAAGGTAA+AGG + chr1_3:42830737-42830756 Msa0119170:intron 40.0%
TTGGTTAACCAAGGTAAAGG+TGG + chr1_3:42830740-42830759 Msa0119170:intron 40.0%
TGGTTAACCAAGGTAAAGGT+GGG + chr1_3:42830741-42830760 Msa0119170:intron 40.0%
!! GATTTCAGGTTGGATGAGAA+CGG + chr1_3:42830764-42830783 Msa0119170:intron 40.0%
CTCTTAAGCTCAAGAACACT+TGG - chr1_3:42830821-42830840 None:intergenic 40.0%
CAAGTGTTCTTGAGCTTAAG+AGG + chr1_3:42830819-42830838 Msa0119170:intron 40.0%
! TGAGCTTAAGAGGCAGATTT+TGG + chr1_3:42830829-42830848 Msa0119170:intron 40.0%
!! AAGAGGCAGATTTTGGAAGA+AGG + chr1_3:42830836-42830855 Msa0119170:intron 40.0%
GCAACATCCTTCTTCATTCT+AGG - chr1_3:42830935-42830954 None:intergenic 40.0%
TCAAAACCCTTAGCAGTCTT+CGG - chr1_3:42831091-42831110 None:intergenic 40.0%
TGTTGATCGGTTGACAAAGT+CGG + chr1_3:42831126-42831145 Msa0119170:intron 40.0%
ACAGACATACCGGTCTTAAT+AGG - chr1_3:42831163-42831182 None:intergenic 40.0%
TATTAAGACCGGTATGTCTG+TGG + chr1_3:42831162-42831181 Msa0119170:intron 40.0%
GAGCAGATTGTTAGATTGCA+TGG + chr1_3:42831208-42831227 Msa0119170:intron 40.0%
CGATCCGACAAAATACTAGA+AGG - chr1_3:42831238-42831257 None:intergenic 40.0%
GAGAGTTTGCAAGATGCTTT+GGG + chr1_3:42831286-42831305 Msa0119170:intron 40.0%
!! ATGCTTTGGGAACTAAGTTG+AGG + chr1_3:42831299-42831318 Msa0119170:intron 40.0%
TTTGTTGAGAGCTTGTGTGT+AGG + chr1_3:42831387-42831406 Msa0119170:intron 40.0%
CGACCATACAAAGCTTCAAA+CGG - chr1_3:42831496-42831515 None:intergenic 40.0%
! CGTTTGAAGCTTTGTATGGT+CGG + chr1_3:42831494-42831513 Msa0119170:intron 40.0%
!! TCAGGTGAAAGTGCTTTGTT+AGG + chr1_3:42831547-42831566 Msa0119170:intron 40.0%
!! TGAAAGTGCTTTGTTAGGAC+CGG + chr1_3:42831552-42831571 Msa0119170:intron 40.0%
AGAGTTATCACGATAAGAGG+AGG + chr1_3:42831647-42831666 Msa0119170:intron 40.0%
TTGAGAGTGAATCCTGTAAC+TGG + chr1_3:42831706-42831725 Msa0119170:intron 40.0%
!! AAGTTGACTCCTCGTTTTGT+TGG + chr1_3:42831754-42831773 Msa0119170:intron 40.0%
TCAAAAGGTCCAACAAAACG+AGG - chr1_3:42831766-42831785 None:intergenic 40.0%
TGAGATTGTTGAGAAGGTTG+GGG + chr1_3:42831783-42831802 Msa0119170:intron 40.0%
TGAAGATTCGACAAAGATGG+CGG - chr1_3:42831832-42831851 None:intergenic 40.0%
TGTTTCATGTGTCTCAGTTG+AGG + chr1_3:42831857-42831876 Msa0119170:intron 40.0%
! TATCCAGAGTTGTTTCCTTC+AGG + chr1_3:42832087-42832106 Msa0119170:intron 40.0%
TTACCTGAAGGAAACAACTC+TGG - chr1_3:42832093-42832112 None:intergenic 40.0%
!!! TTTTGGACTTAGGGGCATTT+TGG + chr1_3:42832287-42832306 Msa0119170:intron 40.0%
CTACACTCTCTCTAGTAACT+TGG - chr1_3:42832387-42832406 None:intergenic 40.0%
!! TTCTTGGTGTTAGAGGTAAG+GGG + chr1_3:42832709-42832728 Msa0119170:intron 40.0%
TGGATTCATGAGGAGATTTG+TGG + chr1_3:42833047-42833066 Msa0119170:intron 40.0%
GAGGAGATTTGTGGTTATGT+TGG + chr1_3:42833056-42833075 Msa0119170:intron 40.0%
!! TGGAAGTTGATTTGGGAGTT+GGG + chr1_3:42833190-42833209 Msa0119170:intron 40.0%
GAGTTGGGGGTTTGAAAATT+GGG + chr1_3:42833205-42833224 Msa0119170:intron 40.0%
TCGCTAATAGCGAAATTGTC+TGG + chr1_3:42833332-42833351 Msa0119170:intron 40.0%
CGCTAATAGCGAAATTGTCT+GGG + chr1_3:42833333-42833352 Msa0119170:intron 40.0%
! TTCCGGAGAAAACGAGTTTT+TGG - chr1_3:42833591-42833610 None:intergenic 40.0%
GTGTGTAGAATTGAAGCACA+AGG - chr1_3:42833931-42833950 None:intergenic 40.0%
GAGAGCTTTACCTATAAGAC+TGG + chr1_3:42833997-42834016 Msa0119170:intron 40.0%
TTCGATACTAGCCACATATG+TGG - chr1_3:42834028-42834047 None:intergenic 40.0%
AACAACACTCTCTTGTGCTA+TGG + chr1_3:42834348-42834367 Msa0119170:intron 40.0%
ACAACACTCTCTTGTGCTAT+GGG + chr1_3:42834349-42834368 Msa0119170:intron 40.0%
AAATGTCTCACCTGTGGTAA+TGG - chr1_3:42834940-42834959 None:intergenic 40.0%
ATCAGTAAATGTCTCACCTG+TGG - chr1_3:42834946-42834965 None:intergenic 40.0%
AGGTGAGACATTTACTGATG+TGG + chr1_3:42834947-42834966 Msa0119170:CDS 40.0%
GAGACATTTACTGATGTGGT+TGG + chr1_3:42834951-42834970 Msa0119170:CDS 40.0%
CTTCAGGAGCAACATAGTAT+GGG - chr1_3:42834980-42834999 None:intergenic 40.0%
ACTTCAGGAGCAACATAGTA+TGG - chr1_3:42834981-42835000 None:intergenic 40.0%
ACGGTCAAGAATGTGATGTA+TGG + chr1_3:42835015-42835034 Msa0119170:CDS 40.0%
CTTTCAGATATACTTGGCCA+CGG - chr1_3:42835254-42835273 None:intergenic 40.0%
CTAGCTATTCAGCATCATAG+AGG - chr1_3:42835361-42835380 None:intergenic 40.0%
ACCAATCATCCTTTGATCCT+AGG + chr1_3:42835656-42835675 Msa0119170:intron 40.0%
CTTCAAACGAGATAAGACAG+CGG - chr1_3:42835913-42835932 None:intergenic 40.0%
ACATAGCAATTGCTTCCCAT+TGG - chr1_3:42836145-42836164 None:intergenic 40.0%
TCTGTATTATATCCCTTGGC+AGG + chr1_3:42836196-42836215 Msa0119170:intron 40.0%
TTTCAGCAATTACCTGCCAA+GGG - chr1_3:42836211-42836230 None:intergenic 40.0%
! TTTTCAGCAATTACCTGCCA+AGG - chr1_3:42836212-42836231 None:intergenic 40.0%
AATTGCTGAAAATCTGTCCG+AGG + chr1_3:42836220-42836239 Msa0119170:CDS 40.0%
! TGGCTTAGAAAGAGTTGGTT+CGG + chr1_3:42836325-42836344 Msa0119170:CDS 40.0%
!! AAGAGTTGGTTCGGTTCTTA+AGG + chr1_3:42836334-42836353 Msa0119170:CDS 40.0%
GAACTGACAATTTGGATAGC+AGG - chr1_3:42836400-42836419 None:intergenic 40.0%
AGCCATGCTTCATCTAAACA+AGG + chr1_3:42836609-42836628 Msa0119170:CDS 40.0%
TACTTTGACAAAGATGGGAG+TGG + chr1_3:42836667-42836686 Msa0119170:CDS 40.0%
TGGGAGTGGATACATTACAA+AGG + chr1_3:42836681-42836700 Msa0119170:CDS 40.0%
AGAAAGAAGTAGGAAAGGAG+AGG - chr1_3:42836849-42836868 None:intergenic 40.0%
TAGAGTTAGCTAATGCCTGA+AGG - chr1_3:42837051-42837070 None:intergenic 40.0%
ATTGGAAACACATCCAGAGC+CGG + chr1_3:42827493-42827512 Msa0119170:CDS 45.0%
TTCTCGAGTGATTCTTGCTG+CGG - chr1_3:42827533-42827552 None:intergenic 45.0%
GCAAAACAACACATCAACCG+AGG + chr1_3:42827565-42827584 Msa0119170:CDS 45.0%
!! CTGAGGAGAACATAGTGGAT+CGG + chr1_3:42827816-42827835 Msa0119170:intron 45.0%
!! TGAGGAGAACATAGTGGATC+GGG + chr1_3:42827817-42827836 Msa0119170:intron 45.0%
! TGTTGTTGTACTGGTGGGAT+CGG - chr1_3:42827866-42827885 None:intergenic 45.0%
GATCAACGAATGGCTGATGA+AGG + chr1_3:42827941-42827960 Msa0119170:intron 45.0%
ACTCGTAAAAAGCTAGCCCT+TGG + chr1_3:42827998-42828017 Msa0119170:intron 45.0%
GGTTTGATAGGACTTGCCAA+GGG - chr1_3:42828017-42828036 None:intergenic 45.0%
GAATGTCTGTATCAGCTGTG+CGG + chr1_3:42828083-42828102 Msa0119170:intron 45.0%
TTCCCAAATGCCAACCTAGT+TGG + chr1_3:42828371-42828390 Msa0119170:intron 45.0%
! TGCCAACCTAGTTGGTATGT+CGG + chr1_3:42828379-42828398 Msa0119170:intron 45.0%
GAAACACCGACATACCAACT+AGG - chr1_3:42828388-42828407 None:intergenic 45.0%
AAGGAGTAATGGCAGACATC+GGG - chr1_3:42828413-42828432 None:intergenic 45.0%
CAAGGAGTAATGGCAGACAT+CGG - chr1_3:42828414-42828433 None:intergenic 45.0%
! GGGGCATTAGATACTCCAAA+TGG - chr1_3:42829690-42829709 None:intergenic 45.0%
! TTTGGAGTATCTAATGCCCC+AGG + chr1_3:42829690-42829709 Msa0119170:intron 45.0%
TGTACTCCATGAAGACACCT+GGG - chr1_3:42829710-42829729 None:intergenic 45.0%
ATGTACTCCATGAAGACACC+TGG - chr1_3:42829711-42829730 None:intergenic 45.0%
CGAGCATTTGAGGATTGTGT+TGG + chr1_3:42829821-42829840 Msa0119170:intron 45.0%
CCACAACCAAAACTCACACT+TGG - chr1_3:42829883-42829902 None:intergenic 45.0%
!!! CCAAGTGTGAGTTTTGGTTG+TGG + chr1_3:42829880-42829899 Msa0119170:intron 45.0%
TTGTGGGAAGTGAGTTTCCT+TGG + chr1_3:42829897-42829916 Msa0119170:intron 45.0%
AACACTGCATCAACCTTCGA+CGG - chr1_3:42829957-42829976 None:intergenic 45.0%
!! AGGTTGATGCAGTGTTGCAA+TGG + chr1_3:42829961-42829980 Msa0119170:intron 45.0%
! GGTTGATGCAGTGTTGCAAT+GGG + chr1_3:42829962-42829981 Msa0119170:intron 45.0%
AGTGAGGAGCTTTCTTGGAT+TGG + chr1_3:42830007-42830026 Msa0119170:intron 45.0%
! TTTCGAGTCAACTGCGTCAA+TGG - chr1_3:42830080-42830099 None:intergenic 45.0%
!! TTGACGCAGTTGACTCGAAA+AGG + chr1_3:42830080-42830099 Msa0119170:intron 45.0%
GGATTCGGCAAAATCAACAC+TGG - chr1_3:42830176-42830195 None:intergenic 45.0%
!! GTTGATTTTGCCGAATCCGA+AGG + chr1_3:42830178-42830197 Msa0119170:intron 45.0%
GAATCCGAAGGAATCGTTTG+TGG + chr1_3:42830190-42830209 Msa0119170:intron 45.0%
!! GATGCTTCTAAGATGGGTCT+TGG + chr1_3:42830221-42830240 Msa0119170:intron 45.0%
TGTGCTTATGCAGAATCGTC+AGG + chr1_3:42830247-42830266 Msa0119170:intron 45.0%
! TATGCAGAATCGTCAGGTTG+TGG + chr1_3:42830253-42830272 Msa0119170:intron 45.0%
AGGTTGTGGCTTATGCTTTG+AGG + chr1_3:42830267-42830286 Msa0119170:intron 45.0%
GCCTCATATTCAACTCCTTC+TGG - chr1_3:42830439-42830458 None:intergenic 45.0%
TGAATATGAGGCAGACGAGA+TGG + chr1_3:42830447-42830466 Msa0119170:intron 45.0%
GTTAGTGAATTGACACCGGA+TGG + chr1_3:42830623-42830642 Msa0119170:intron 45.0%
GGAGATCAAGAATGGTCAGA+AGG + chr1_3:42830688-42830707 Msa0119170:intron 45.0%
GATCAAGAATGGTCAGAAGG+AGG + chr1_3:42830691-42830710 Msa0119170:intron 45.0%
GGTTAACCAAGGTAAAGGTG+GGG + chr1_3:42830742-42830761 Msa0119170:intron 45.0%
TGAAATCCCCACCTTTACCT+TGG - chr1_3:42830751-42830770 None:intergenic 45.0%
AAGGTAAAGGTGGGGATTTC+AGG + chr1_3:42830750-42830769 Msa0119170:intron 45.0%
! TAAAGGTGGGGATTTCAGGT+TGG + chr1_3:42830754-42830773 Msa0119170:intron 45.0%
TGATACATCTTAGTCGCTCC+GGG - chr1_3:42830887-42830906 None:intergenic 45.0%
CTGATACATCTTAGTCGCTC+CGG - chr1_3:42830888-42830907 None:intergenic 45.0%
! TTGGTGGCCTAGAATGAAGA+AGG + chr1_3:42830925-42830944 Msa0119170:intron 45.0%
ATTGAACATCAGAAGCCGTC+AGG + chr1_3:42830995-42831014 Msa0119170:intron 45.0%
AACGGTTGCATCAAACCTGA+CGG - chr1_3:42831013-42831032 None:intergenic 45.0%
ATACTATCCCACTTCCACTC+TGG - chr1_3:42831043-42831062 None:intergenic 45.0%
CAACTTAGCCACAGACATAC+CGG - chr1_3:42831173-42831192 None:intergenic 45.0%
GGAGAGTTTGCAAGATGCTT+TGG + chr1_3:42831285-42831304 Msa0119170:intron 45.0%
GGAGAGGACTATTCAGAGTT+TGG + chr1_3:42831360-42831379 Msa0119170:intron 45.0%
! GCACCGTTTGAAGCTTTGTA+TGG + chr1_3:42831490-42831509 Msa0119170:intron 45.0%
! TTGAAGCTTTGTATGGTCGG+AGG + chr1_3:42831497-42831516 Msa0119170:intron 45.0%
CCTGACTCATACCAACACAA+AGG - chr1_3:42831532-42831551 None:intergenic 45.0%
! CCTTTGTGTTGGTATGAGTC+AGG + chr1_3:42831529-42831548 Msa0119170:intron 45.0%
AGTGAATCCTGTAACTGGTG+TGG + chr1_3:42831711-42831730 Msa0119170:intron 45.0%
GTGAATCCTGTAACTGGTGT+GGG + chr1_3:42831712-42831731 Msa0119170:intron 45.0%
TCACGATCCTCAATCCTAAC+CGG - chr1_3:42831961-42831980 None:intergenic 45.0%
TGCCCTCGAAAATTACCTGA+AGG - chr1_3:42832105-42832124 None:intergenic 45.0%
CAACACTAACGGTCACTTAC+CGG - chr1_3:42832425-42832444 None:intergenic 45.0%
!! GAAATGGGTTAGGCCCATTA+AGG + chr1_3:42832489-42832508 Msa0119170:intron 45.0%
!! TCTTGGTGTTAGAGGTAAGG+GGG + chr1_3:42832710-42832729 Msa0119170:intron 45.0%
!! CTGGAAGTTGATTTGGGAGT+TGG + chr1_3:42833189-42833208 Msa0119170:intron 45.0%
!! GGAAGTTGATTTGGGAGTTG+GGG + chr1_3:42833191-42833210 Msa0119170:intron 45.0%
!! GAAGTTGATTTGGGAGTTGG+GGG + chr1_3:42833192-42833211 Msa0119170:intron 45.0%
GGAGTTGGGGGTTTGAAAAT+TGG + chr1_3:42833204-42833223 Msa0119170:intron 45.0%
GCGCTAATAGTGAAACTGTC+TGG + chr1_3:42833284-42833303 Msa0119170:intron 45.0%
! TGTGGAACTCCCAGTCTTAT+AGG - chr1_3:42834010-42834029 None:intergenic 45.0%
ACAAGTTCGAGGATGGTGTA+TGG + chr1_3:42834153-42834172 Msa0119170:intron 45.0%
ACTCTCTTGTGCTATGGGAA+AGG + chr1_3:42834354-42834373 Msa0119170:intron 45.0%
CTCTCTTGTGCTATGGGAAA+GGG + chr1_3:42834355-42834374 Msa0119170:intron 45.0%
GTAATTACGAGGGATCCAGA+TGG - chr1_3:42834494-42834513 None:intergenic 45.0%
! AATGTGATGTATGGAGCGCT+GGG + chr1_3:42835024-42835043 Msa0119170:CDS 45.0%
! TCAGTGGAGTTCCACCATTT+TGG + chr1_3:42835066-42835085 Msa0119170:CDS 45.0%
! CAGTGGAGTTCCACCATTTT+GGG + chr1_3:42835067-42835086 Msa0119170:CDS 45.0%
TTCTCACCATCCCAAAATGG+TGG - chr1_3:42835080-42835099 None:intergenic 45.0%
GCATTCTCACCATCCCAAAA+TGG - chr1_3:42835083-42835102 None:intergenic 45.0%
GGATCCTAAGAAGAGGATGA+CGG + chr1_3:42835307-42835326 Msa0119170:CDS 45.0%
ATTTAACCCTGGGAAGGATG+AGG + chr1_3:42835568-42835587 Msa0119170:intron 45.0%
TTTAACCCTGGGAAGGATGA+GGG + chr1_3:42835569-42835588 Msa0119170:intron 45.0%
GCCTAGGATCAAAGGATGAT+TGG - chr1_3:42835660-42835679 None:intergenic 45.0%
GAGAGAATGCCTAGGATCAA+AGG - chr1_3:42835668-42835687 None:intergenic 45.0%
ATCATTTGCAGGCCATCCTT+GGG + chr1_3:42835848-42835867 Msa0119170:intron 45.0%
GTACTGGATACTCACTCGAA+TGG - chr1_3:42835970-42835989 None:intergenic 45.0%
AAGTCCTGCAATTTCCTCCT+CGG - chr1_3:42836240-42836259 None:intergenic 45.0%
!! CAGGCAGACGTTGATAATAG+TGG + chr1_3:42836559-42836578 Msa0119170:intron 45.0%
CAAACTGGTTACAGGCTTGT+TGG - chr1_3:42836714-42836733 None:intergenic 45.0%
CAACAAGCCTGTAACCAGTT+TGG + chr1_3:42836712-42836731 Msa0119170:CDS 45.0%
TTGTAGGCCAAACTGGTTAC+AGG - chr1_3:42836722-42836741 None:intergenic 45.0%
GATCATCTTGTAGGCCAAAC+TGG - chr1_3:42836729-42836748 None:intergenic 45.0%
AAGTAGGAAAGGAGAGGAGA+GGG - chr1_3:42836843-42836862 None:intergenic 45.0%
!!! CTAAAATTTTATTAAAAAAA+AGG - chr1_3:42828327-42828346 None:intergenic 5.0%
!!! TTTATATTTTTTTTAAAGAA+TGG + chr1_3:42828712-42828731 Msa0119170:intron 5.0%
!! ATTATCTTAAAAATATATAA+AGG - chr1_3:42829289-42829308 None:intergenic 5.0%
!! ATAATTTAAATGTTATAAAA+AGG + chr1_3:42829361-42829380 Msa0119170:intron 5.0%
CAATTGTTGCTGCGGTGATG+GGG - chr1_3:42827477-42827496 None:intergenic 50.0%
CCAATTGTTGCTGCGGTGAT+GGG - chr1_3:42827478-42827497 None:intergenic 50.0%
TCCAATTGTTGCTGCGGTGA+TGG - chr1_3:42827479-42827498 None:intergenic 50.0%
TGATTCTTGCTGCGGTGATG+GGG - chr1_3:42827525-42827544 None:intergenic 50.0%
GTGATTCTTGCTGCGGTGAT+GGG - chr1_3:42827526-42827545 None:intergenic 50.0%
AGTGATTCTTGCTGCGGTGA+TGG - chr1_3:42827527-42827546 None:intergenic 50.0%
GCAGCAAGAATCACTCGAGA+AGG + chr1_3:42827532-42827551 Msa0119170:CDS 50.0%
AGGGGATACATCTTCTCCTC+AGG + chr1_3:42827667-42827686 Msa0119170:CDS 50.0%
! TTACTACAACTCGCACCGAC+CGG + chr1_3:42827753-42827772 Msa0119170:intron 50.0%
!! GTAAAGAAGTGCTAGGCAGC+CGG - chr1_3:42827775-42827794 None:intergenic 50.0%
GTTAGAGGAGATAGAGGCTG+AGG + chr1_3:42827799-42827818 Msa0119170:intron 50.0%
AGAGGCTGAGGAGAACATAG+TGG + chr1_3:42827811-42827830 Msa0119170:intron 50.0%
!! GAGGAGAACATAGTGGATCG+GGG + chr1_3:42827818-42827837 Msa0119170:intron 50.0%
! ACGAGTTTGCTTCTGTGCCT+TGG - chr1_3:42827984-42828003 None:intergenic 50.0%
GGGTTTGATAGGACTTGCCA+AGG - chr1_3:42828018-42828037 None:intergenic 50.0%
TCCTATCAAACCCGCGCAAA+GGG + chr1_3:42828025-42828044 Msa0119170:intron 50.0%
GGCTGATCGTCAGTTGCATA+TGG + chr1_3:42828164-42828183 Msa0119170:intron 50.0%
ATACAAGAAGAGGGGGGACT+AGG - chr1_3:42828295-42828314 None:intergenic 50.0%
TAGAGTTTGGCGGCATAGGA+CGG + chr1_3:42828344-42828363 Msa0119170:intron 50.0%
CACCGACATACCAACTAGGT+TGG - chr1_3:42828384-42828403 None:intergenic 50.0%
TAATGCCCCAGGTGTCTTCA+TGG + chr1_3:42829701-42829720 Msa0119170:intron 50.0%
GTACTCCATGAAGACACCTG+GGG - chr1_3:42829709-42829728 None:intergenic 50.0%
! TTCTAAAGGTGGCATTGCGG+TGG + chr1_3:42829929-42829948 Msa0119170:intron 50.0%
!! AGGAGCTTTCTTGGATTGGC+AGG + chr1_3:42830011-42830030 Msa0119170:intron 50.0%
!! GCTTCTAAGATGGGTCTTGG+TGG + chr1_3:42830224-42830243 Msa0119170:intron 50.0%
!! GCAACAACATTGGCCTTTCC+AGG - chr1_3:42830515-42830534 None:intergenic 50.0%
AATTGACACCGGATGGTGTG+AGG + chr1_3:42830630-42830649 Msa0119170:intron 50.0%
ATTCCCAACCTCACACCATC+CGG - chr1_3:42830641-42830660 None:intergenic 50.0%
ACTGGTTGATCGTGTGGTGT+TGG + chr1_3:42830721-42830740 Msa0119170:intron 50.0%
!! CGTGTGGTGTTGGTTAACCA+AGG + chr1_3:42830731-42830750 Msa0119170:intron 50.0%
CGGAGCGACTAAGATGTATC+AGG + chr1_3:42830886-42830905 Msa0119170:intron 50.0%
TTCCACTCTGGCACGAACAA+CGG - chr1_3:42831031-42831050 None:intergenic 50.0%
AGCTTTGCCGAAGACTGCTA+AGG + chr1_3:42831081-42831100 Msa0119170:intron 50.0%
GCTTTGCCGAAGACTGCTAA+GGG + chr1_3:42831082-42831101 Msa0119170:intron 50.0%
CGGTATGTCTGTGGCTAAGT+TGG + chr1_3:42831171-42831190 Msa0119170:intron 50.0%
GCTTATCATCCCCAGACTGA+TGG + chr1_3:42831331-42831350 Msa0119170:intron 50.0%
AGAGCTTGTGTGTAGGAGCA+AGG + chr1_3:42831394-42831413 Msa0119170:intron 50.0%
! TGTAGGAGCAAGGTGTCAGT+TGG + chr1_3:42831404-42831423 Msa0119170:intron 50.0%
! GTAGGAGCAAGGTGTCAGTT+GGG + chr1_3:42831405-42831424 Msa0119170:intron 50.0%
! CTTTGTATGGTCGGAGGTGT+AGG + chr1_3:42831503-42831522 Msa0119170:intron 50.0%
GGTGTAGGACTCCTTTGTGT+TGG + chr1_3:42831518-42831537 Msa0119170:intron 50.0%
!! AGATGAGAGCGTCTCAGAGT+AGG + chr1_3:42831620-42831639 Msa0119170:intron 50.0%
!! TGGGACGTGCTTTGAAGTGT+CGG + chr1_3:42831731-42831750 Msa0119170:intron 50.0%
AGGTTGGGGTTGTAGCGTAT+CGG + chr1_3:42831797-42831816 Msa0119170:intron 50.0%
TGCGTCCCATGTGATTCAAG+TGG + chr1_3:42831894-42831913 Msa0119170:intron 50.0%
TTTGACCGTTGAGACTTGGC+CGG + chr1_3:42831939-42831958 Msa0119170:intron 50.0%
!! GTGATTTGGGTTGGACCAAC+CGG + chr1_3:42832021-42832040 Msa0119170:intron 50.0%
!! TGAGAGTGCCACTTGGGAAT+CGG + chr1_3:42832044-42832063 Msa0119170:intron 50.0%
GGAATCGGAGAGTAGGATGA+GGG + chr1_3:42832059-42832078 Msa0119170:intron 50.0%
GAGGAGGGGATTCATCATCT+AGG + chr1_3:42832660-42832679 Msa0119170:intron 50.0%
GACTGGGAGTTCCACATATG+TGG + chr1_3:42834014-42834033 Msa0119170:intron 50.0%
TCTTAGTAGACAACCCGCTG+AGG - chr1_3:42834680-42834699 None:intergenic 50.0%
GAATGTGATGTATGGAGCGC+TGG + chr1_3:42835023-42835042 Msa0119170:CDS 50.0%
!! ATGTGATGTATGGAGCGCTG+GGG + chr1_3:42835025-42835044 Msa0119170:CDS 50.0%
!! GGAGTTCCACCATTTTGGGA+TGG + chr1_3:42835071-42835090 Msa0119170:CDS 50.0%
TGTGCCGTCATCCTCTTCTT+AGG - chr1_3:42835314-42835333 None:intergenic 50.0%
TTAACCCTGGGAAGGATGAG+GGG + chr1_3:42835570-42835589 Msa0119170:intron 50.0%
GATCATTTGCAGGCCATCCT+TGG + chr1_3:42835847-42835866 Msa0119170:intron 50.0%
GATAAGACAGCGGAGTCAAG+CGG - chr1_3:42835903-42835922 None:intergenic 50.0%
TGCTGAAAATCTGTCCGAGG+AGG + chr1_3:42836223-42836242 Msa0119170:CDS 50.0%
GAAGTAGGAAAGGAGAGGAG+AGG - chr1_3:42836844-42836863 None:intergenic 50.0%
CGAGCGAGTTTCTTCTGTTC+TGG + chr1_3:42837104-42837123 Msa0119170:three_prime_UTR 50.0%
!! TGCGGTGATGGGGAAACAAC+CGG - chr1_3:42827467-42827486 None:intergenic 55.0%
CCCATCACCGCAGCAACAAT+TGG + chr1_3:42827475-42827494 Msa0119170:CDS 55.0%
! GATTCTTGCTGCGGTGATGG+GGG - chr1_3:42827524-42827543 None:intergenic 55.0%
GTCCTATCAAACCCGCGCAA+AGG + chr1_3:42828024-42828043 Msa0119170:intron 55.0%
ACCCTTTGCGCGGGTTTGAT+AGG - chr1_3:42828029-42828048 None:intergenic 55.0%
!! ATGGAAGAGCACCCTTTGCG+CGG - chr1_3:42828039-42828058 None:intergenic 55.0%
GAGTAATGGCAGACATCGGG+AGG - chr1_3:42828410-42828429 None:intergenic 55.0%
! ATACTAGCGGTTGACGGGCA+CGG + chr1_3:42828992-42829011 Msa0119170:intron 55.0%
! AGGAGCATGCCGAGCATTTG+AGG + chr1_3:42829811-42829830 Msa0119170:intron 55.0%
ACACCGGATGGTGTGAGGTT+GGG + chr1_3:42830635-42830654 Msa0119170:intron 55.0%
AACCGTTGTTCGTGCCAGAG+TGG + chr1_3:42831026-42831045 Msa0119170:intron 55.0%
TGTTCGTGCCAGAGTGGAAG+TGG + chr1_3:42831032-42831051 Msa0119170:intron 55.0%
GTTCGTGCCAGAGTGGAAGT+GGG + chr1_3:42831033-42831052 Msa0119170:intron 55.0%
! TTTTGTCGGATCGGGATCCG+AGG + chr1_3:42831245-42831264 Msa0119170:intron 55.0%
TCCCCAGACTGATGGTCAGA+CGG + chr1_3:42831339-42831358 Msa0119170:intron 55.0%
TCCGTCTGACCATCAGTCTG+GGG - chr1_3:42831343-42831362 None:intergenic 55.0%
CTCCGTCTGACCATCAGTCT+GGG - chr1_3:42831344-42831363 None:intergenic 55.0%
TCTCCGTCTGACCATCAGTC+TGG - chr1_3:42831345-42831364 None:intergenic 55.0%
AGACTGATGGTCAGACGGAG+AGG + chr1_3:42831344-42831363 Msa0119170:intron 55.0%
GTCGTCTCTTGCACGACTTC+CGG - chr1_3:42831574-42831593 None:intergenic 55.0%
CGTGCAAGAGACGACCAAGA+AGG + chr1_3:42831579-42831598 Msa0119170:intron 55.0%
CCTAACCGGCCAAGTCTCAA+CGG - chr1_3:42831947-42831966 None:intergenic 55.0%
GACTTGGCCGGTTAGGATTG+AGG + chr1_3:42831951-42831970 Msa0119170:intron 55.0%
! CGTGAAGTGAAGCGTTTGCG+TGG + chr1_3:42831976-42831995 Msa0119170:intron 55.0%
! AGTGAAGCGTTTGCGTGGCA+AGG + chr1_3:42831981-42832000 Msa0119170:intron 55.0%
!! AACCGGTGAGAGTGCCACTT+GGG + chr1_3:42832038-42832057 Msa0119170:intron 55.0%
TTCCCAAGTGGCACTCTCAC+CGG - chr1_3:42832043-42832062 None:intergenic 55.0%
CCTACTCTCCGATTCCCAAG+TGG - chr1_3:42832055-42832074 None:intergenic 55.0%
CCACTTGGGAATCGGAGAGT+AGG + chr1_3:42832052-42832071 Msa0119170:intron 55.0%
GGGAATCGGAGAGTAGGATG+AGG + chr1_3:42832058-42832077 Msa0119170:intron 55.0%
TAACCCTGGGAAGGATGAGG+GGG + chr1_3:42835571-42835590 Msa0119170:intron 55.0%
GATGAGGGGGGAGTAAAGCA+TGG + chr1_3:42835584-42835603 Msa0119170:intron 55.0%
CTCCAACCTGAACCCAAGGA+TGG - chr1_3:42835863-42835882 None:intergenic 55.0%
!! CATCCTTGGGTTCAGGTTGG+AGG + chr1_3:42835861-42835880 Msa0119170:CDS 55.0%
ACACCTCCAACCTGAACCCA+AGG - chr1_3:42835867-42835886 None:intergenic 55.0%
GCGGAGTCAAGCGGTTTATC+AGG - chr1_3:42835894-42835913 None:intergenic 55.0%
CTGTCCGAGGAGGAAATTGC+AGG + chr1_3:42836233-42836252 Msa0119170:CDS 55.0%
!! AGAAGTGCTAGGCAGCCGGT+CGG - chr1_3:42827771-42827790 None:intergenic 60.0%
!! TGGAAGAGCACCCTTTGCGC+GGG - chr1_3:42828038-42828057 None:intergenic 60.0%
AGTTTGGCGGCATAGGACGG+AGG + chr1_3:42828347-42828366 Msa0119170:intron 60.0%
CATTGCGGTGGATCCGTCGA+AGG + chr1_3:42829941-42829960 Msa0119170:intron 60.0%
GACACCGGATGGTGTGAGGT+TGG + chr1_3:42830634-42830653 Msa0119170:intron 60.0%
GCACGTCCCACACCAGTTAC+AGG - chr1_3:42831721-42831740 None:intergenic 60.0%
CCGTTGAGACTTGGCCGGTT+AGG + chr1_3:42831944-42831963 Msa0119170:intron 60.0%
! GAAGCGTTTGCGTGGCAAGG+AGG + chr1_3:42831984-42832003 Msa0119170:intron 60.0%
CAAGTGGCACTCTCACCGGT+TGG - chr1_3:42832039-42832058 None:intergenic 60.0%
!! CAACCGGTGAGAGTGCCACT+TGG + chr1_3:42832037-42832056 Msa0119170:intron 60.0%
AACCCTGGGAAGGATGAGGG+GGG + chr1_3:42835572-42835591 Msa0119170:intron 60.0%
TGCAGGCCATCCTTGGGTTC+AGG + chr1_3:42835854-42835873 Msa0119170:intron 60.0%
GGCCATCCTTGGGTTCAGGT+TGG + chr1_3:42835858-42835877 Msa0119170:intron 60.0%
!! TGCGGTGATGGGGGAGCAAC+CGG - chr1_3:42827515-42827534 None:intergenic 65.0%
CTCCCCCCTCATCCTTCCCA+GGG - chr1_3:42835577-42835596 None:intergenic 65.0%
ACTCCCCCCTCATCCTTCCC+AGG - chr1_3:42835578-42835597 None:intergenic 65.0%
! GATGGGGGAGCAACCGGCTC+TGG - chr1_3:42827509-42827528 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 42827449 42837174 42827449 ID=Msa0119170;Name=Msa0119170
chr1_3 mRNA 42827449 42837174 42827449 ID=Msa0119170-mRNA-1;Parent=Msa0119170;Name=Msa0119170-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.28|0.37|0.75|0.71|0.75|8|151|390
chr1_3 exon 42827449 42827694 42827449 ID=Msa0119170-mRNA-1:exon:12904;Parent=Msa0119170-mRNA-1
chr1_3 exon 42829509 42829514 42829509 ID=Msa0119170-mRNA-1:exon:12905;Parent=Msa0119170-mRNA-1
chr1_3 exon 42834906 42835092 42834906 ID=Msa0119170-mRNA-1:exon:12906;Parent=Msa0119170-mRNA-1
chr1_3 exon 42835192 42835344 42835192 ID=Msa0119170-mRNA-1:exon:12907;Parent=Msa0119170-mRNA-1
chr1_3 exon 42835859 42835974 42835859 ID=Msa0119170-mRNA-1:exon:12908;Parent=Msa0119170-mRNA-1
chr1_3 exon 42836218 42836385 42836218 ID=Msa0119170-mRNA-1:exon:12909;Parent=Msa0119170-mRNA-1
chr1_3 exon 42836562 42836786 42836562 ID=Msa0119170-mRNA-1:exon:12910;Parent=Msa0119170-mRNA-1
chr1_3 exon 42836952 42837174 42836952 ID=Msa0119170-mRNA-1:exon:12911;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42827449 42827694 42827449 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42829509 42829514 42829509 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42834906 42835092 42834906 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42835192 42835344 42835192 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42835859 42835974 42835859 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42836218 42836385 42836218 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42836562 42836786 42836562 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 CDS 42836952 42837023 42836952 ID=Msa0119170-mRNA-1:cds;Parent=Msa0119170-mRNA-1
chr1_3 three_prime_UTR 42837024 42837174 42837024 ID=Msa0119170-mRNA-1:three_prime_utr;Parent=Msa0119170-mRNA-1
Gene Sequence

>Msa0119170

GAAAAGCATTCAGAGCCGGTTGTTTCCCCATCACCGCAGCAACAATTGGAAACACATCCAGAGCCGGTTGCTCCCCCATCACCGCAGCAAGAATCACTCGAGAAGGAAGTGCCCGAGCAAAACAACACATCAACCGAGGCTTTTATAGCTTTGGAAGCAACTTTACAAGCTGATGATGTCGCAGAACATACCATTGCAGATGAAAATTTGGCGCAACAAGGGGATACATCTTCTCCTCAGGAAAATCATAAGCTTTTTCTAGTTCAGTTTGAGAAAAATATATCCATTACCACAGGTGAGACATTTACTGATGTGGTTGGAAGCCCATACTATGTTGCTCCTGAAGTTTTACGGAAGAACTACGGTCAAGAATGTGATGTATGGAGCGCTGGGGTGATCATTTATATTCTACTCAGTGGAGTTCCACCATTTTGGGATGAAACTGAGCAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGATCCGTGGCCAAGTATATCTGAAAGTGCAAAGGATCTTGTTCGAAGAATGCTTATAAGGGATCCTAAGAAGAGGATGACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCGCTTGACTCCGCTGTCTTATCTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAATCTGTCCGAGGAGGAAATTGCAGGACTTAAAGAAATGTTCAAGATGATAGACACAGATAATAGCGGACAGATCACTCTTGAAGAACTGAAAAATGGCTTAGAAAGAGTTGGTTCGGTTCTTAAGGATTCTGAAATCAACTGGTTAATGCAAGCGGCAGACGTTGATAATAGTGGTACCATAGACTATGGTGAATTCATAGCAGCCATGCTTCATCTAAACAAGGTTCAAAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAGCTCCAACAAGCCTGTAACCAGTTTGGCCTACAAGATGATCATCTAGATGATATAATACGTGAAGCTGATCGCGATAACGATGGTCGCATTGACTACAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGCTATAA
Protein sequence

>Msa0119170

EKHSEPVVSPSPQQQLETHPEPVAPPSPQQESLEKEVPEQNNTSTEAFIALEATLQADDVAEHTIADENLAQQGDTSSPQENHKLFLVQFEKNISITTGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISDPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACNQFGLQDDHLDDIIREADRDNDGRIDYSEFVAMMQDTDFGKKGL*