AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0120080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120080 MtrunA17_Chr1g0178301 96.208 923 13 1 1 901 1 923 0.0 1837
Msa0120080 MtrunA17_Chr1g0189851 26.856 741 450 13 168 831 3 728 5.75e-72 252
Msa0120080 MtrunA17_Chr1g0189851 26.623 308 178 2 99 406 9 268 1.43e-22 103
Msa0120080 MtrunA17_Chr1g0189851 23.899 318 192 4 62 379 6 273 5.48e-17 85.9
Msa0120080 MtrunA17_Chr1g0189851 28.372 215 143 3 51 263 63 268 9.96e-14 75.5
Msa0120080 MtrunA17_Chr1g0189861 32.593 135 84 1 287 414 78 212 1.31e-16 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0120080 AT3G11540.1 78.829 888 160 4 8 869 6 891 0.0 1453
Msa0120080 AT3G11540.2 62.209 688 194 8 208 869 62 709 0.0 841
Msa0120080 AT3G11540.2 64.615 260 86 2 8 267 6 259 4.44e-98 323
Msa0120080 AT3G11540.2 32.536 209 135 2 164 371 51 254 6.85e-21 99.0
Msa0120080 AT3G04240.1 27.150 814 494 13 96 831 169 961 2.67e-77 272
Msa0120080 AT3G04240.1 28.487 337 193 5 138 440 111 433 1.02e-34 143
Msa0120080 AT3G04240.2 27.027 740 450 11 168 831 3 728 1.42e-72 254
Msa0120080 AT3G04240.2 28.837 215 142 3 51 263 63 268 4.14e-14 77.0

Find 282 sgRNAs with CRISPR-Local

Find 1100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAACAATCACTTTATATT+TGG 0.174755 1_3:+44721743 None:intergenic
CCTATCACAAGAGGCCTTTC+AGG 0.182295 1_3:+44721840 None:intergenic
AATAATGGTGGCATGATAAA+AGG 0.186795 1_3:-44732413 Msa0120080:five_prime_UTR
GGCTATAGCTTTGACAGATT+TGG 0.190528 1_3:-44725514 Msa0120080:CDS
CATTTCAGGTCTGGAGAATT+TGG 0.193184 1_3:-44716861 Msa0120080:intron
GGGATTGGGGTTTGCGATTT+AGG 0.202719 1_3:-44721905 Msa0120080:CDS
AGAAAGCTTTGTATTATAAT+TGG 0.214202 1_3:-44724996 Msa0120080:CDS
AGAAGATCAAGTTGATATTT+TGG 0.224534 1_3:-44720100 Msa0120080:CDS
GAGAAGAAGGTGAAGATTAA+AGG 0.230574 1_3:+44732195 None:intergenic
TGGCCGCTATAACCGATATT+TGG 0.239845 1_3:+44716092 None:intergenic
CGATATTTGGACTATAATTC+AGG 0.245718 1_3:+44716105 None:intergenic
GTTCCAATCCCAACTGTTCT+AGG 0.252656 1_3:+44718514 None:intergenic
TGAAGATGAATATGTTAAAT+TGG 0.260888 1_3:-44716828 Msa0120080:CDS
TTTACCACGAGGCGAGAATT+TGG 0.263350 1_3:+44718585 None:intergenic
TCCTCTCCGGTGACGGCGTT+TGG 0.269490 1_3:+44732283 None:intergenic
ATGCTTGCAGATGCAGAATA+TGG 0.277525 1_3:-44731250 Msa0120080:CDS
ACACTTGAGTTGATTAATAA+TGG 0.277554 1_3:-44732428 None:intergenic
CTCCTACAGTATTGAAGGTT+TGG 0.283896 1_3:-44718629 Msa0120080:CDS
AACGTTTCCTTTCAGGGATT+GGG 0.284934 1_3:-44721919 Msa0120080:intron
GGACAAACAGGACCGGCTTC+AGG 0.294090 1_3:+44719097 None:intergenic
GTTATGCAGGAGTTCTTTAC+AGG 0.298205 1_3:-44723901 Msa0120080:intron
AAGGAGTTAGGCGGAGAAAA+TGG 0.299798 1_3:-44731474 Msa0120080:CDS
GCTATAGCTTTGACAGATTT+GGG 0.302908 1_3:-44725513 Msa0120080:CDS
TGCTTTGTATGAGCGTGTTT+TGG 0.303672 1_3:-44731316 Msa0120080:CDS
GGTGGAGATGATACTGTTTC+GGG 0.315838 1_3:-44731417 Msa0120080:CDS
TTGTATATTGTGGTTACTAA+TGG 0.331579 1_3:-44716309 Msa0120080:three_prime_UTR
AACTACTTCTGCTTTGTTCC+AGG 0.333719 1_3:+44719273 None:intergenic
TCACTTTGTACTCTTGTTCA+TGG 0.337986 1_3:+44716072 None:intergenic
TATAATCTTGGGGTTGCTTA+TGG 0.339291 1_3:-44724955 Msa0120080:CDS
GCCATTGTTCTAACGGATAT+CGG 0.344530 1_3:-44726834 Msa0120080:CDS
AAGAGTGGCGGTGGTGGTGG+TGG 0.360308 1_3:+44732242 None:intergenic
TCGCCAACATTCTGCGTTCG+AGG 0.367764 1_3:-44731359 Msa0120080:CDS
CTGAATTATAGTCCAAATAT+CGG 0.371082 1_3:-44716104 Msa0120080:three_prime_UTR
TCCTACAGTATTGAAGGTTT+GGG 0.373461 1_3:-44718628 Msa0120080:CDS
ATTACAACATTGGAATTGAA+TGG 0.378217 1_3:+44732343 None:intergenic
ATTAACGGATGCGAAGAAAA+TGG 0.378522 1_3:-44716500 Msa0120080:CDS
TACTAATGGAAGAGGCTTGC+GGG 0.379146 1_3:-44716295 Msa0120080:three_prime_UTR
TGAAAAGAAGGTTGCTGATA+TGG 0.388018 1_3:-44720127 Msa0120080:CDS
CTTACGTTTACGACCCTTGT+TGG 0.388500 1_3:+44716587 None:intergenic
CTAACACTATCACAGCAAAA+TGG 0.388533 1_3:+44718555 None:intergenic
AGAAGAAGGTGAAGATTAAA+GGG 0.392471 1_3:+44732196 None:intergenic
AGTGGCGGTGGTGGTGGTGG+TGG 0.393509 1_3:+44732245 None:intergenic
TTATAGGTGGAGTATTAATA+TGG 0.403360 1_3:-44716334 Msa0120080:three_prime_UTR
GATTACTCCTACAGTATTGA+AGG 0.404177 1_3:-44718634 Msa0120080:CDS
AGGGTGTTGAACTGTATTAT+AGG 0.410967 1_3:-44716350 Msa0120080:three_prime_UTR
TAAAGAAGAAGGTCGCTTGA+TGG 0.412204 1_3:-44731142 Msa0120080:CDS
GCTGATGCTATGTATAATCT+TGG 0.412712 1_3:-44724967 Msa0120080:CDS
CTGATGCTATGTATAATCTT+GGG 0.412773 1_3:-44724966 Msa0120080:CDS
GTGAAGAGTGGCGGTGGTGG+TGG 0.413209 1_3:+44732239 None:intergenic
CCACCGAAACTTAATATTAA+CGG 0.413685 1_3:-44716515 Msa0120080:CDS
CTTACAACTACTGTATTTCA+AGG 0.413724 1_3:+44716437 None:intergenic
AAGTGTAGGTGGAGAGAAGA+AGG 0.414397 1_3:+44732182 None:intergenic
AATGTCAGACGCTAACTTCA+TGG 0.415602 1_3:+44716805 None:intergenic
TTGGACACCTTTCCATATGC+TGG 0.418408 1_3:-44717499 Msa0120080:CDS
GGTGAAGATTAAAGGGAGAA+TGG 0.421391 1_3:+44732203 None:intergenic
TGAGATGCTTAAGTTTGATA+TGG 0.421506 1_3:-44724932 Msa0120080:intron
ACAGAGTGTGTAAAATAATC+AGG 0.422004 1_3:+44721807 None:intergenic
TGGTGGAGATGATACTGTTT+CGG 0.425439 1_3:-44731418 Msa0120080:CDS
GTCATATCAAAAGGCGTTAC+GGG 0.426642 1_3:-44726892 Msa0120080:CDS
TTTAATGACTGTGAAAAGTT+CGG 0.427034 1_3:+44724560 None:intergenic
GTAGGCAATCCTGTAGTATT+GGG 0.428950 1_3:+44719333 None:intergenic
AACGTAAGTGAGGGCAGCCC+TGG 0.430162 1_3:-44716572 Msa0120080:CDS
TCATACTGCAAACAATAAGT+TGG 0.431329 1_3:-44720064 Msa0120080:CDS
CATCCGTTAATATTAAGTTT+CGG 0.431962 1_3:+44716512 None:intergenic
TCATAAAGAAGGGTGGGATC+TGG 0.434639 1_3:-44720170 Msa0120080:CDS
CCGCGCAATGTGGATTGAAA+TGG 0.435847 1_3:+44724763 None:intergenic
GATTCACTGGCAGACCCTCC+TGG 0.436684 1_3:-44719291 Msa0120080:CDS
TGTAGGCAATCCTGTAGTAT+TGG 0.438062 1_3:+44719332 None:intergenic
GTCGTAGTTGTCCCAGCATA+TGG 0.438408 1_3:+44717487 None:intergenic
CAGCCAGCATACTATAACCT+TGG 0.439383 1_3:-44726610 Msa0120080:CDS
TCAGCAGCTGCTTTGTATGT+AGG 0.440272 1_3:+44726864 None:intergenic
CCTGAAAGGCCTCTTGTGAT+AGG 0.441989 1_3:-44721840 Msa0120080:CDS
GGTGTAGTCATGATAGATAA+GGG 0.442114 1_3:+44721764 None:intergenic
AAAGGAAGCAATCTGGTAAT+CGG 0.442974 1_3:+44719134 None:intergenic
GGTACCAACATAAAGCTTGC+AGG 0.444006 1_3:-44726813 Msa0120080:CDS
AATTCCATGCGTTTCAAAGA+AGG 0.447507 1_3:+44716647 None:intergenic
ATAATGGTGGCATGATAAAA+GGG 0.450384 1_3:-44732412 Msa0120080:five_prime_UTR
CTTATTCTCTGATGGACATC+AGG 0.450885 1_3:-44718437 Msa0120080:intron
GGATCTGGAAAGATATTTAC+GGG 0.452463 1_3:-44720155 Msa0120080:CDS
CCATTGGCCATGACAGATCC+AGG 0.452512 1_3:+44716554 None:intergenic
TAGAGAGAAAGTCATAAAGA+AGG 0.454246 1_3:-44720181 Msa0120080:CDS
GTAGAGGCCCTCATTGGAAA+AGG 0.454582 1_3:-44731276 Msa0120080:CDS
TTTATCCGATTGAATGCAAA+AGG 0.457251 1_3:-44715902 Msa0120080:three_prime_UTR
CTTGGAGCAGTCATATCAAA+AGG 0.457406 1_3:-44726901 Msa0120080:intron
CGACTCTCGAAATGCTGGCC+AGG 0.457423 1_3:-44723819 Msa0120080:intron
AAACTCCAATGTTGTGAACT+TGG 0.457938 1_3:+44715922 None:intergenic
AAACAATAAGTTGGGAATGA+TGG 0.459317 1_3:-44720055 Msa0120080:CDS
AACCCTAGAACAGTTGGGAT+TGG 0.459844 1_3:-44718517 Msa0120080:CDS
AGTCATATCAAAAGGCGTTA+CGG 0.460125 1_3:-44726893 Msa0120080:CDS
GGGATCTGGAAAGATATTTA+CGG 0.460406 1_3:-44720156 Msa0120080:CDS
ATTGGTTATCCCAATACTAC+AGG 0.463408 1_3:-44719342 Msa0120080:CDS
ATGTCGACCTGCTCCAGTTC+AGG 0.465083 1_3:-44720031 Msa0120080:intron
TCTCCGGTGACGGCGTTTGG+AGG 0.468371 1_3:+44732286 None:intergenic
TCGCTTGATGGAGGCGGCTG+AGG 0.468708 1_3:-44731130 Msa0120080:intron
CCGGTGAAGAGTGGCGGTGG+TGG 0.468864 1_3:+44732236 None:intergenic
GAAATACAGTAGTTGTAAGC+AGG 0.470527 1_3:-44716433 Msa0120080:three_prime_UTR
GGTATTCTTTATAAAGAAGA+AGG 0.471517 1_3:-44731153 Msa0120080:CDS
TAATATGGTATTGTATATTG+TGG 0.471580 1_3:-44716319 Msa0120080:three_prime_UTR
TGGACTATAATTCAGGGAAA+AGG 0.472788 1_3:+44716112 None:intergenic
GCGGAAGCTTGTAACAATCT+AGG 0.472813 1_3:-44724744 Msa0120080:CDS
AATGGAAAAGAAAAGGAGTT+AGG 0.473830 1_3:-44731486 Msa0120080:CDS
GTGATTCTATAATCAATTGT+AGG 0.474581 1_3:+44719315 None:intergenic
CTCTTCTTCCTCTCCGGTGA+CGG 0.477008 1_3:+44732276 None:intergenic
AGCATTCTACAGCTTTATCA+AGG 0.477598 1_3:+44724697 None:intergenic
TGATGGGAATGGAAAAGAAA+AGG 0.481433 1_3:-44731493 Msa0120080:CDS
TGCTTGACATGCAGGTGACT+TGG 0.481716 1_3:-44719365 Msa0120080:intron
GGAAATGTAGAGGCCCTCAT+TGG 0.482457 1_3:-44731282 Msa0120080:CDS
CATACTGCAAACAATAAGTT+GGG 0.482594 1_3:-44720063 Msa0120080:CDS
TGTTGGTGTTGTTGAAGTGT+AGG 0.486504 1_3:+44732168 None:intergenic
GACACGCTCTTCTTCCTCTC+CGG 0.487545 1_3:+44732270 None:intergenic
CTTTCAACCCTAGAACAGTT+GGG 0.489454 1_3:-44718522 Msa0120080:CDS
AGTTTGTAGTGAGTGGTTCA+AGG 0.489801 1_3:-44716370 Msa0120080:three_prime_UTR
TGGCCAGCATTTCGAGAGTC+GGG 0.492424 1_3:+44723821 None:intergenic
TTCCAATCCCAACTGTTCTA+GGG 0.493195 1_3:+44718515 None:intergenic
GTGTAACAAAGGAAGCAATC+TGG 0.494008 1_3:+44719127 None:intergenic
TATATCAACAATTTACATCA+TGG 0.495872 1_3:-44721878 Msa0120080:CDS
GATCCCGACTCTCGAAATGC+TGG 0.496321 1_3:-44723824 Msa0120080:CDS
TACACTCCTTCCCCTGAAGC+CGG 0.496573 1_3:-44719109 Msa0120080:CDS
TGTTTCGTTGATTACAACAT+TGG 0.497085 1_3:+44732333 None:intergenic
GGAGTTCTTTACAGGGATGC+TGG 0.497325 1_3:-44723893 Msa0120080:CDS
TCTTTCAACCCTAGAACAGT+TGG 0.497799 1_3:-44718523 Msa0120080:CDS
GACAAACAGGACCGGCTTCA+GGG 0.497870 1_3:+44719098 None:intergenic
CTAATTTCTCCAGGGCAAGA+TGG 0.499035 1_3:-44724439 Msa0120080:intron
GTTTCCTGCAAGCTTTATGT+TGG 0.502386 1_3:+44726809 None:intergenic
TTATAGAATCACCGATTCAC+TGG 0.502813 1_3:-44719304 Msa0120080:CDS
TTGTATGCTTCTGCATATGT+CGG 0.504928 1_3:+44724375 None:intergenic
GAACCATCTGTTAGTGCTGG+TGG 0.505383 1_3:-44731435 Msa0120080:CDS
TGCGATTAAGATGGCTTGGA+TGG 0.506071 1_3:-44731523 Msa0120080:exon
TGTTCCTTCTTTGAAACGCA+TGG 0.506434 1_3:-44716651 Msa0120080:CDS
AAGTTTGCTCCATCACAGAC+AGG 0.506847 1_3:+44716731 None:intergenic
ATGGAATTGTTAGAACAGTC+TGG 0.508906 1_3:-44716632 Msa0120080:CDS
TGCTTGCAGATGCAGAATAT+GGG 0.509417 1_3:-44731249 Msa0120080:CDS
GACATGCAGGTGACTTGGAT+TGG 0.510733 1_3:-44719360 Msa0120080:intron
TGGTGTAGTCATGATAGATA+AGG 0.510960 1_3:+44721763 None:intergenic
TGGACACCTTTCCATATGCT+GGG 0.511736 1_3:-44717498 Msa0120080:CDS
GATATTTGGACTATAATTCA+GGG 0.513387 1_3:+44716106 None:intergenic
TCCATCACAGACAGGGGACT+TGG 0.516446 1_3:+44716739 None:intergenic
TCACAGTCATTAAATAACCT+TGG 0.516706 1_3:-44724551 Msa0120080:CDS
AGGTTCTAGAAAGCTGTTGT+TGG 0.517536 1_3:+44732151 None:intergenic
TTACGGGACTGATGAAAAGA+AGG 0.520027 1_3:-44720139 Msa0120080:CDS
CAGTAGTAAGCAGGGAGTGG+TGG 0.520963 1_3:-44716462 Msa0120080:CDS
GTTCCATGCGTTACAATGGC+TGG 0.522013 1_3:-44717442 Msa0120080:CDS
AGAGAGAAAGTCATAAAGAA+GGG 0.522740 1_3:-44720180 Msa0120080:CDS
GATGGAGCAAACTTCATCCT+TGG 0.523953 1_3:-44716722 Msa0120080:CDS
TATGCAAGCTTATTCTCTGA+TGG 0.524107 1_3:-44718445 Msa0120080:CDS
GAGAAAGTCATAAAGAAGGG+TGG 0.526509 1_3:-44720177 Msa0120080:CDS
TAGTTGTAAGCAGGGAGTGG+TGG 0.526730 1_3:-44716424 Msa0120080:three_prime_UTR
GCAATGAACTACATAGATGA+AGG 0.527116 1_3:-44722622 Msa0120080:CDS
GTTGAAATTCAGTAGTAAGC+AGG 0.527448 1_3:-44716471 Msa0120080:CDS
CTGCGTATCCACAGCAGTTG+AGG 0.528828 1_3:+44716182 None:intergenic
AGGAGGGTCTGCCAGTGAAT+CGG 0.530447 1_3:+44719293 None:intergenic
TGGTGTTGTTGAAGTGTAGG+TGG 0.530664 1_3:+44732171 None:intergenic
TGGGAAAGAAATGTAAGCAA+TGG 0.532881 1_3:-44716224 Msa0120080:three_prime_UTR
TCCAAGTCCCCTGTCTGTGA+TGG 0.533672 1_3:-44716740 Msa0120080:CDS
CTCAACTGCTGTGGATACGC+AGG 0.534455 1_3:-44716181 Msa0120080:three_prime_UTR
TATATATAGGTTAAACTGGA+GGG 0.535539 1_3:-44725048 Msa0120080:intron
CCACCACCGCCACTCTTCAC+CGG 0.536036 1_3:-44732236 Msa0120080:five_prime_UTR
ATTGTGGTTACTAATGGAAG+AGG 0.536550 1_3:-44716303 Msa0120080:three_prime_UTR
GGGCAGCCCTGGATCTGTCA+TGG 0.536846 1_3:-44716561 Msa0120080:CDS
CCTGGATCTGTCATGGCCAA+TGG 0.537171 1_3:-44716554 Msa0120080:CDS
TACTTCTGCTTTGTTCCAGG+AGG 0.537366 1_3:+44719276 None:intergenic
AGTCAACATATAGGAATATG+TGG 0.538234 1_3:-44716694 Msa0120080:CDS
GACTTTCTCTCTAAACCGAA+TGG 0.541018 1_3:+44720191 None:intergenic
AATGACATTCTAGAAAAGAA+AGG 0.541303 1_3:+44715950 None:intergenic
ACGTTTCCTTTCAGGGATTG+GGG 0.541398 1_3:-44721918 Msa0120080:intron
CATCCTCCAAACGCCGTCAC+CGG 0.541736 1_3:-44732289 Msa0120080:five_prime_UTR
AAAGTGCGATTAAGATGGCT+TGG 0.542411 1_3:-44731527 Msa0120080:exon
ATGCTTAGCCATTGTTCTAA+CGG 0.545780 1_3:-44726841 Msa0120080:CDS
ATCGTGGTTAAGAAGAATGA+GGG 0.546515 1_3:+44718470 None:intergenic
ATTGGGGTTTGCGATTTAGG+AGG 0.548190 1_3:-44721902 Msa0120080:CDS
CCTCCGGTGAAGAGTGGCGG+TGG 0.550710 1_3:+44732233 None:intergenic
TGGAATTGAATGGACGCAAA+GGG 0.552486 1_3:+44732353 None:intergenic
AGAAAGTCATAAAGAAGGGT+GGG 0.553285 1_3:-44720176 Msa0120080:CDS
GACATGTGAATCTTTATACA+TGG 0.554128 1_3:-44717467 Msa0120080:CDS
GTTCCTCGAACGCAGAATGT+TGG 0.555210 1_3:+44731356 None:intergenic
AGTTGTAAGCAGGGAGTGGT+GGG 0.557268 1_3:-44716423 Msa0120080:three_prime_UTR
ACGCCAAGGTTATAGTATGC+TGG 0.557401 1_3:+44726607 None:intergenic
GTTGGCCAAGTTCACAACAT+TGG 0.557466 1_3:-44715927 Msa0120080:three_prime_UTR
AGAAGGTCGCTTGATGGAGG+CGG 0.558114 1_3:-44731136 Msa0120080:CDS
GTAATCAACGAAACAGTCTC+AGG 0.558646 1_3:-44732325 Msa0120080:five_prime_UTR
ACTTCTGCTTTGTTCCAGGA+GGG 0.559641 1_3:+44719277 None:intergenic
TAGAGGCCCTCATTGGAAAA+GGG 0.561915 1_3:-44731275 Msa0120080:CDS
ACAGGACCGGCTTCAGGGGA+AGG 0.562431 1_3:+44719103 None:intergenic
TGTTTATTCAGCAGTTGTCA+AGG 0.564705 1_3:-44721727 Msa0120080:intron
CAGTATTGAAGGTTTGGGCA+AGG 0.565819 1_3:-44718623 Msa0120080:CDS
ATACAGGCATGTTGAAGAGT+TGG 0.568551 1_3:-44719158 Msa0120080:intron
ATATCAACAATTTACATCAT+GGG 0.568966 1_3:-44721877 Msa0120080:CDS
CTGCGATGAGTTGAATCCAT+TGG 0.570253 1_3:+44716538 None:intergenic
GCTTGGATGGAAGAAAATGA+TGG 0.572619 1_3:-44731510 Msa0120080:CDS
GTTTGTAGTGAGTGGTTCAA+GGG 0.574226 1_3:-44716369 Msa0120080:three_prime_UTR
TTGGTCTAGAGTCAACATAT+AGG 0.574276 1_3:-44716703 Msa0120080:CDS
CTGGCCAGCATTTCGAGAGT+CGG 0.575758 1_3:+44723820 None:intergenic
AAATCGAGGGGATTTGGAAG+CGG 0.578393 1_3:-44726473 Msa0120080:CDS
AGTAGTAAGCAGGGAGTGGT+GGG 0.579199 1_3:-44716461 Msa0120080:CDS
ATGGAAGAAAATGATGGGAA+TGG 0.579523 1_3:-44731504 Msa0120080:CDS
ATTTGTCTCCTCAACTGCTG+TGG 0.582622 1_3:-44716190 Msa0120080:three_prime_UTR
TTTGACAGATTTGGGAACAA+AGG 0.583823 1_3:-44725505 Msa0120080:intron
GGGAGTTCCATGCGTTACAA+TGG 0.585085 1_3:-44717446 Msa0120080:CDS
GATCGTGGTTAAGAAGAATG+AGG 0.587538 1_3:+44718469 None:intergenic
GTAGGAAAGTGCGATTAAGA+TGG 0.589642 1_3:-44731532 Msa0120080:intron
CCGTTAATATTAAGTTTCGG+TGG 0.591862 1_3:+44716515 None:intergenic
TTATATATAGGTTAAACTGG+AGG 0.592431 1_3:-44725049 Msa0120080:intron
ACCGATATCCGTTAGAACAA+TGG 0.593246 1_3:+44726833 None:intergenic
ACAAACAGGACCGGCTTCAG+GGG 0.594160 1_3:+44719099 None:intergenic
CAATATGCTTCAGCATACAT+AGG 0.595835 1_3:+44726517 None:intergenic
TGTAGTTCATTGCAAGCAAG+CGG 0.597782 1_3:+44722632 None:intergenic
TTGGAATTGAATGGACGCAA+AGG 0.597793 1_3:+44732352 None:intergenic
GGACGTGTTACAGCTATCAA+AGG 0.598375 1_3:+44716133 None:intergenic
CCATTTCAATCCACATTGCG+CGG 0.598593 1_3:-44724763 Msa0120080:CDS
CAGTAGTTGTAAGCAGGGAG+TGG 0.598688 1_3:-44716427 Msa0120080:three_prime_UTR
AAATACAGTAGTTGTAAGCA+GGG 0.600094 1_3:-44716432 Msa0120080:three_prime_UTR
CGGCTATTACTTGTTATGAG+AGG 0.604626 1_3:-44726453 Msa0120080:intron
AAAGAACCATCTGTTAGTGC+TGG 0.605131 1_3:-44731438 Msa0120080:CDS
TGTTGGCTCAGAGTTCTCAT+CGG 0.605514 1_3:+44716604 None:intergenic
GTTAGTCTTCTTAGCAACGT+TGG 0.605579 1_3:-44717394 Msa0120080:intron
TTTCCTCCGGTGAAGAGTGG+CGG 0.607144 1_3:+44732230 None:intergenic
TTACTAATGGAAGAGGCTTG+CGG 0.607697 1_3:-44716296 Msa0120080:three_prime_UTR
CTTGAGTTGATTAATAATGG+TGG 0.608966 1_3:-44732425 Msa0120080:five_prime_UTR
ACAACTCAAAAGATCCTGAA+AGG 0.609457 1_3:-44721854 Msa0120080:CDS
AAGGGTCGTAAACGTAAGTG+AGG 0.611128 1_3:-44716582 Msa0120080:CDS
AGAAGAAGGTCGCTTGATGG+AGG 0.611858 1_3:-44731139 Msa0120080:CDS
ATGAGAACTCTGAGCCAACA+AGG 0.611903 1_3:-44716601 Msa0120080:CDS
TTGAAATTCAGTAGTAAGCA+GGG 0.612768 1_3:-44716470 Msa0120080:CDS
ATTCAGTAGTAAGCAGGGAG+TGG 0.614724 1_3:-44716465 Msa0120080:CDS
AGTTTGCTCCATCACAGACA+GGG 0.615315 1_3:+44716732 None:intergenic
GAACCAGCCATTGTAACGCA+TGG 0.617679 1_3:+44717439 None:intergenic
AGGAGTTGGACAAACAGGAC+CGG 0.620142 1_3:+44719090 None:intergenic
TAAAGCTGTAGAATGCTACC+AGG 0.622266 1_3:-44724691 Msa0120080:intron
GTGTTGAACTGTATTATAGG+TGG 0.623117 1_3:-44716347 Msa0120080:three_prime_UTR
TGATGCTATGTATAATCTTG+GGG 0.623907 1_3:-44724965 Msa0120080:CDS
GCTTGTGCTCTCACACATTG+TGG 0.625603 1_3:-44731174 Msa0120080:CDS
AGTCCAAATATCGGTTATAG+CGG 0.628180 1_3:-44716095 Msa0120080:three_prime_UTR
GATACATATCCTATCACAAG+AGG 0.628353 1_3:+44721831 None:intergenic
TCAACTGCTGTGGATACGCA+GGG 0.629015 1_3:-44716180 Msa0120080:three_prime_UTR
ATATCAAAAGGCGTTACGGG+TGG 0.632025 1_3:-44726889 Msa0120080:CDS
TAATGGTGGCATGATAAAAG+GGG 0.635658 1_3:-44732411 Msa0120080:five_prime_UTR
GCAGAAGCATACAATAACCT+AGG 0.635669 1_3:-44724366 Msa0120080:intron
TCAGTGCATGCACACAATGT+TGG 0.636781 1_3:-44717418 Msa0120080:CDS
TTATGCAGGAGTTCTTTACA+GGG 0.637305 1_3:-44723900 Msa0120080:intron
TCCAAACGCCGTCACCGGAG+AGG 0.637429 1_3:-44732284 Msa0120080:five_prime_UTR
CCACCGCCACTCTTCACCGG+AGG 0.638712 1_3:-44732233 Msa0120080:five_prime_UTR
TGCTGAAGCATATTGCAACA+TGG 0.639915 1_3:-44726509 Msa0120080:CDS
ACATGTGAATCTTTATACAT+GGG 0.643465 1_3:-44717466 Msa0120080:CDS
GTGTAGTCATGATAGATAAG+GGG 0.643538 1_3:+44721765 None:intergenic
GGAAAAGAAAAGGAGTTAGG+CGG 0.643942 1_3:-44731483 Msa0120080:CDS
CAGGGGAAGGAGTGTAACAA+AGG 0.644941 1_3:+44719116 None:intergenic
CTTGGATGGAAGAAAATGAT+GGG 0.645396 1_3:-44731509 Msa0120080:CDS
AAACAGTCTCAGGTAGTGTG+TGG 0.651936 1_3:-44732315 Msa0120080:five_prime_UTR
AAAGCTTGCAGGAAACACTC+AGG 0.653199 1_3:-44726802 Msa0120080:CDS
AATAAGCTTGCATATGATCG+TGG 0.654127 1_3:+44718454 None:intergenic
GGCAGAAGATCAACTCGTAG+TGG 0.655351 1_3:+44718492 None:intergenic
TCTCCACCAGCACTAACAGA+TGG 0.656480 1_3:+44731432 None:intergenic
AGTTGTCCCAGCATATGGAA+AGG 0.656859 1_3:+44717492 None:intergenic
CTTGCAGGAAACACTCAGGA+GGG 0.657439 1_3:-44726798 Msa0120080:CDS
CAAAATAGATCATCATTATG+CGG 0.657503 1_3:-44726751 Msa0120080:intron
TTACAAGCTTCCGCGCAATG+TGG 0.657608 1_3:+44724753 None:intergenic
GCTGAAGCATATTGCAACAT+GGG 0.658136 1_3:-44726508 Msa0120080:CDS
ATGTGGCACAGATATTGCAA+AGG 0.661926 1_3:-44716677 Msa0120080:CDS
GCTGTGATAGTGTTAGACAG+AGG 0.662643 1_3:-44718548 Msa0120080:CDS
TCTTATAAAATGCCACACCA+CGG 0.667085 1_3:+44725016 None:intergenic
TGCAGATGCAGAATATGGGT+AGG 0.667692 1_3:-44731245 Msa0120080:CDS
TTTCAGAATAGACCACGCCA+AGG 0.672931 1_3:+44726593 None:intergenic
GCTTGCAGGAAACACTCAGG+AGG 0.673057 1_3:-44726799 Msa0120080:CDS
CATTGGCCATGACAGATCCA+GGG 0.673447 1_3:+44716555 None:intergenic
GCCCAAACCTTCAATACTGT+AGG 0.673618 1_3:+44718627 None:intergenic
TACAAAGTGATGTCAAATAG+CGG 0.674780 1_3:-44716059 Msa0120080:three_prime_UTR
AGCATACTATAACCTTGGCG+TGG 0.680382 1_3:-44726605 Msa0120080:CDS
AATTCCAAATTCTCGCCTCG+TGG 0.681538 1_3:-44718589 Msa0120080:CDS
TGAGAACTCTGAGCCAACAA+GGG 0.687752 1_3:-44716600 Msa0120080:CDS
GAGTGATGGTGGAAATGTAG+AGG 0.690028 1_3:-44731292 Msa0120080:CDS
TGGACGCAAAGGGACAACGC+AGG 0.690519 1_3:+44732363 None:intergenic
GCAATGTGGATTGAAATGGA+AGG 0.691952 1_3:+44724767 None:intergenic
GGGTGACATTAACCGTGGTG+TGG 0.704448 1_3:-44725028 Msa0120080:CDS
AGGGTCGTAAACGTAAGTGA+GGG 0.707509 1_3:-44716581 Msa0120080:CDS
TATATGTTGACTCTAGACCA+AGG 0.708288 1_3:+44716705 None:intergenic
TGAAATGATGCAATATGACA+TGG 0.713132 1_3:-44726575 Msa0120080:CDS
GTTTGCTCCATCACAGACAG+GGG 0.716045 1_3:+44716733 None:intergenic
GTGGAGATGATACTGTTTCG+GGG 0.718764 1_3:-44731416 Msa0120080:CDS
CTGGAGGGTGACATTAACCG+TGG 0.722495 1_3:-44725033 Msa0120080:CDS
TCGTGGTTAAGAAGAATGAG+GGG 0.735597 1_3:+44718471 None:intergenic
GGACAGTGTATACAACACCA+AGG 0.741726 1_3:+44724534 None:intergenic
ACTGCTGTGGATACGCAGGG+AGG 0.746014 1_3:-44716177 Msa0120080:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTAATATTTTAAT+GGG + chr1_3:44720869-44720888 None:intergenic 0.0%
!!! TTTAATTATTAATATTTTAA+TGG + chr1_3:44720870-44720889 None:intergenic 0.0%
!!! AATATATATATATTTTTTTT+TGG - chr1_3:44722245-44722264 Msa0120080:intron 0.0%
!! AATTTAAAAAAAAAAAAAAT+CGG + chr1_3:44726750-44726769 None:intergenic 0.0%
!! ATAAAAGAAATTGAAAATTA+GGG + chr1_3:44716195-44716214 None:intergenic 10.0%
!! AATAAAAGAAATTGAAAATT+AGG + chr1_3:44716196-44716215 None:intergenic 10.0%
!!! TTTAGTTTTTCTATTTTTTT+TGG - chr1_3:44716249-44716268 Msa0120080:three_prime_UTR 10.0%
!! TTTGTATTTATTATTAGTAT+TGG - chr1_3:44716507-44716526 Msa0120080:CDS 10.0%
!!! TACTTAAATAAATTATTTTC+AGG - chr1_3:44718556-44718575 Msa0120080:CDS 10.0%
!!! ATCTATGATATTTTTTTTTT+AGG - chr1_3:44719139-44719158 Msa0120080:CDS 10.0%
!! ATTTAATAATGATTATGAAA+AGG + chr1_3:44720830-44720849 None:intergenic 10.0%
!! TAAATGATATAATTAGTTAA+TGG + chr1_3:44720941-44720960 None:intergenic 10.0%
!!! AATATTTTAATATTTTCAGT+AGG - chr1_3:44720971-44720990 Msa0120080:intron 10.0%
!!! TTAAAATGGATTTAATAAAA+AGG + chr1_3:44721610-44721629 None:intergenic 10.0%
!!! AAAATAGAAATCTAAAATTT+AGG + chr1_3:44722308-44722327 None:intergenic 10.0%
!! ATAAAAAAATAAAAATACCT+AGG + chr1_3:44723957-44723976 None:intergenic 10.0%
!!! TACAAATATGATTTATTTTA+AGG - chr1_3:44724323-44724342 Msa0120080:intron 10.0%
!!! AAAAACATTATTTCTATTTT+TGG - chr1_3:44724701-44724720 Msa0120080:CDS 10.0%
!! AAAAGAAAAAAGAAAAAAAT+TGG + chr1_3:44727122-44727141 None:intergenic 10.0%
!!! TTTTAAAATGTAAAAACAAA+TGG + chr1_3:44728056-44728075 None:intergenic 10.0%
!!! TTTTGAATATTATACATAAA+TGG + chr1_3:44728676-44728695 None:intergenic 10.0%
!!! TAAATATAGAATTTTTGTGT+TGG - chr1_3:44716349-44716368 Msa0120080:three_prime_UTR 15.0%
!! CAACAATACATATTAATAAA+AGG + chr1_3:44716481-44716500 None:intergenic 15.0%
!! TTTATTAATATGTATTGTTG+TGG - chr1_3:44716481-44716500 Msa0120080:CDS 15.0%
!!! TTTTATGCATATAAATATCA+AGG + chr1_3:44717622-44717641 None:intergenic 15.0%
!!! ATACTTTATTTGATATGTTT+AGG - chr1_3:44718312-44718331 Msa0120080:intron 15.0%
!! GGAAAAATATTTGTATAAAT+AGG - chr1_3:44719259-44719278 Msa0120080:intron 15.0%
!!! TATTTTGAACATTTAGTAAT+TGG - chr1_3:44720577-44720596 Msa0120080:intron 15.0%
!!! ATTTTGAACATTTAGTAATT+GGG - chr1_3:44720578-44720597 Msa0120080:intron 15.0%
!! AGGAAAAAAATTATCTTTAA+GGG + chr1_3:44720810-44720829 None:intergenic 15.0%
!! AAGGAAAAAAATTATCTTTA+AGG + chr1_3:44720811-44720830 None:intergenic 15.0%
!!! GATTTGCTTATTATTTAAAA+TGG + chr1_3:44721624-44721643 None:intergenic 15.0%
!! ACATAAAAAATAAAAACAAG+AGG - chr1_3:44722423-44722442 Msa0120080:intron 15.0%
!! CATAAAAAATAAAAACAAGA+GGG - chr1_3:44722424-44722443 Msa0120080:intron 15.0%
!! CTTAAAAGCTAAAAATATTA+GGG + chr1_3:44722514-44722533 None:intergenic 15.0%
!! TCTTAAAAGCTAAAAATATT+AGG + chr1_3:44722515-44722534 None:intergenic 15.0%
!!! TATTTTTAGCTTTTAAGAAA+AGG - chr1_3:44722517-44722536 Msa0120080:intron 15.0%
!! TTATTCATGTTTATAATAGA+AGG + chr1_3:44722960-44722979 None:intergenic 15.0%
!! ATAAACATGAATAATAGTAA+TGG - chr1_3:44722966-44722985 Msa0120080:intron 15.0%
!!! TTTTTATATATAGGTTAAAC+TGG - chr1_3:44723251-44723270 Msa0120080:intron 15.0%
!! GTAGAAATATTCAAATATAT+TGG - chr1_3:44724087-44724106 Msa0120080:intron 15.0%
!!! TGATTTTTATTTTAAATGCA+TGG + chr1_3:44724207-44724226 None:intergenic 15.0%
!! TTAAATTTGTATTGTAATCT+TGG - chr1_3:44725163-44725182 Msa0120080:intron 15.0%
!!! ATTGTTTTATCTTAATTGTT+TGG - chr1_3:44725919-44725938 Msa0120080:intron 15.0%
!! AGAAGAAAATAAGTAAAAAA+TGG - chr1_3:44726099-44726118 Msa0120080:intron 15.0%
!! ATAAACAATCACTTTATATT+TGG + chr1_3:44726563-44726582 None:intergenic 15.0%
!! AAAAAGAAAAAAATTGGAAT+CGG + chr1_3:44727116-44727135 None:intergenic 15.0%
!! AAATGAAATCATAAATGATT+AGG - chr1_3:44727277-44727296 Msa0120080:intron 15.0%
!! AATGAAATCATAAATGATTA+GGG - chr1_3:44727278-44727297 Msa0120080:intron 15.0%
!!! TATATTTCTATTGATTATTG+TGG - chr1_3:44727796-44727815 Msa0120080:intron 15.0%
!!! TTTTTTTTTTTTGCATATGT+TGG - chr1_3:44728430-44728449 Msa0120080:intron 15.0%
!! TAGTATATATATTCCTAAAA+TGG - chr1_3:44728595-44728614 Msa0120080:intron 15.0%
!! AGTATATATATTCCTAAAAT+GGG - chr1_3:44728596-44728615 Msa0120080:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr1_3:44729400-44729419 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr1_3:44729399-44729418 Msa0120080:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr1_3:44729423-44729442 Msa0120080:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr1_3:44729526-44729545 Msa0120080:intron 15.0%
!! AAGAACAAATTATTAAAGAT+AGG - chr1_3:44729609-44729628 Msa0120080:intron 15.0%
!! GATATAAAATTTACATACAT+TGG - chr1_3:44730343-44730362 Msa0120080:intron 15.0%
!! TATAATCGTAATCAAAATAT+TGG + chr1_3:44730715-44730734 None:intergenic 15.0%
!!! GAATTTCATGATTCATTTTT+TGG - chr1_3:44716274-44716293 Msa0120080:three_prime_UTR 20.0%
!!! TGAAAAATGTTTTTGTTTGT+GGG - chr1_3:44716749-44716768 Msa0120080:CDS 20.0%
!!! TTTTTTATGATGAAATAGCA+TGG - chr1_3:44717237-44717256 Msa0120080:intron 20.0%
!! TTTATATATTAGATTGAGTG+AGG - chr1_3:44717416-44717435 Msa0120080:CDS 20.0%
!!! TTTTTTAACATAAAACACAG+AGG - chr1_3:44717520-44717539 Msa0120080:intron 20.0%
!! TTCTATGAATTACTTAGTAA+GGG - chr1_3:44717580-44717599 Msa0120080:intron 20.0%
!! GTTGAATATATTAGATTCAT+AGG + chr1_3:44717704-44717723 None:intergenic 20.0%
!! AATATAATAGAAACAAAGAC+AGG - chr1_3:44718135-44718154 Msa0120080:intron 20.0%
!! ATATAATAGAAACAAAGACA+GGG - chr1_3:44718136-44718155 Msa0120080:intron 20.0%
!!! TAAATAAATTATTTTCAGGC+AGG - chr1_3:44718560-44718579 Msa0120080:CDS 20.0%
!!! AAATAAATTATTTTCAGGCA+GGG - chr1_3:44718561-44718580 Msa0120080:CDS 20.0%
!!! CAGTAAAATGATAGTTTTTT+TGG - chr1_3:44719059-44719078 Msa0120080:intron 20.0%
!! TGGTTAAGATATAGAATAAA+AGG - chr1_3:44719195-44719214 Msa0120080:intron 20.0%
!! GGTTAAGATATAGAATAAAA+GGG - chr1_3:44719196-44719215 Msa0120080:intron 20.0%
!!! GGGTTTATTTTTATATTTCA+TGG - chr1_3:44720017-44720036 Msa0120080:intron 20.0%
!! TTGTTAGGATATAGAATAAA+AGG - chr1_3:44720482-44720501 Msa0120080:intron 20.0%
!! TGTTAGGATATAGAATAAAA+GGG - chr1_3:44720483-44720502 Msa0120080:intron 20.0%
!!! TGAGAATACTTTTACAAAAT+AGG + chr1_3:44720655-44720674 None:intergenic 20.0%
!!! TTTCTTTTCAATTTGATTTC+TGG - chr1_3:44720695-44720714 Msa0120080:intron 20.0%
!!! TTCTTTTCAATTTGATTTCT+GGG - chr1_3:44720696-44720715 Msa0120080:intron 20.0%
!! TTTATAGACAAGTATAAGAT+CGG + chr1_3:44720761-44720780 None:intergenic 20.0%
!!! AAAATTATCTTTAAGGGAAA+AGG + chr1_3:44720804-44720823 None:intergenic 20.0%
!! CATATATACTATATTCATCT+TGG + chr1_3:44721282-44721301 None:intergenic 20.0%
!!! TGATAATCAAATGATTTTCT+TGG - chr1_3:44721384-44721403 Msa0120080:intron 20.0%
!! TTAATAAAAAGGAAAAATGC+AGG + chr1_3:44721599-44721618 None:intergenic 20.0%
!! AAAAAACATTCATATTATGC+AGG + chr1_3:44721656-44721675 None:intergenic 20.0%
!!! ATGATTTTCCCTAAAAATTA+AGG - chr1_3:44722010-44722029 Msa0120080:intron 20.0%
!!! TGATTTTCCCTAAAAATTAA+GGG - chr1_3:44722011-44722030 Msa0120080:intron 20.0%
!!! ATATTTTTTTTTGGAAGAAC+AGG - chr1_3:44722254-44722273 Msa0120080:intron 20.0%
!!! TATTTTTTTTTGGAAGAACA+GGG - chr1_3:44722255-44722274 Msa0120080:intron 20.0%
!! ATGGTAATATAATTGAAATG+AGG - chr1_3:44722985-44723004 Msa0120080:intron 20.0%
!! TGGTAATATAATTGAAATGA+GGG - chr1_3:44722986-44723005 Msa0120080:intron 20.0%
!!! TTATTGTCTATAGTTTTTCA+CGG - chr1_3:44723141-44723160 Msa0120080:intron 20.0%
!!! AGAAAGCTTTGTATTATAAT+TGG - chr1_3:44723307-44723326 Msa0120080:intron 20.0%
!! TATCTTAATATATTACATGC+AGG + chr1_3:44723440-44723459 None:intergenic 20.0%
!! AAATGATATTACTTATGCTA+GGG - chr1_3:44724139-44724158 Msa0120080:intron 20.0%
!!! ATTTTGTTTCTCTTTGTATA+TGG - chr1_3:44724299-44724318 Msa0120080:intron 20.0%
!! CAAAAGTTAAAATACCAATA+CGG + chr1_3:44724681-44724700 None:intergenic 20.0%
!!! CATTATTTCTATTTTTGGTT+AGG - chr1_3:44724706-44724725 Msa0120080:CDS 20.0%
!!! ATATTTGGACTTTTAGTTAT+TGG + chr1_3:44725061-44725080 None:intergenic 20.0%
!! AATAACTAAAAGTCCAAATA+TGG - chr1_3:44725060-44725079 Msa0120080:intron 20.0%
!!! ATTTAAGCAACAATTTTAAG+AGG + chr1_3:44725149-44725168 None:intergenic 20.0%
!! TATACATATATATGGAGAAA+GGG + chr1_3:44725272-44725291 None:intergenic 20.0%
!! ATATACATATATATGGAGAA+AGG + chr1_3:44725273-44725292 None:intergenic 20.0%
!! TCTCCATATATATGTATATT+CGG - chr1_3:44725274-44725293 Msa0120080:intron 20.0%
!! CTGTCATAAAATTTAAAGAA+AGG + chr1_3:44725836-44725855 None:intergenic 20.0%
!!! ATAGAACTTTAATTGATTTC+CGG - chr1_3:44725887-44725906 Msa0120080:intron 20.0%
!! TTAAGATAAAACAATGAAGA+TGG + chr1_3:44725914-44725933 None:intergenic 20.0%
!! CTAAATATAAAGCAAGATTA+TGG + chr1_3:44726182-44726201 None:intergenic 20.0%
!! TATATCAACAATTTACATCA+TGG - chr1_3:44726425-44726444 Msa0120080:intron 20.0%
!! ATATCAACAATTTACATCAT+GGG - chr1_3:44726426-44726445 Msa0120080:intron 20.0%
!! AAAGAACAAGAAATATATGA+AGG + chr1_3:44726630-44726649 None:intergenic 20.0%
!!! TCTTGTTCTTTTAATACATT+TGG - chr1_3:44726639-44726658 Msa0120080:intron 20.0%
!! AAATATATTATGCAAAACCT+TGG + chr1_3:44726673-44726692 None:intergenic 20.0%
!! TCTAGGAAATTAATTTCTTT+AGG - chr1_3:44726956-44726975 Msa0120080:intron 20.0%
!!! GAAATTAATTTCTTTAGGAA+TGG - chr1_3:44726961-44726980 Msa0120080:intron 20.0%
!! AATATTGCATTGAACTAAAT+AGG + chr1_3:44727204-44727223 None:intergenic 20.0%
!! ATGAAATCATAAATGATTAG+GGG - chr1_3:44727279-44727298 Msa0120080:intron 20.0%
!!! CAAATATTCAATAAGTTTTC+TGG - chr1_3:44727510-44727529 Msa0120080:intron 20.0%
!!! TTTTTTTTTTGTTGTTGCTA+TGG - chr1_3:44727717-44727736 Msa0120080:intron 20.0%
!! TAATTCACAGAAATATACTT+TGG + chr1_3:44728476-44728495 None:intergenic 20.0%
!! TTAAGAAATGCAATGATTAA+AGG - chr1_3:44729355-44729374 Msa0120080:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr1_3:44729409-44729428 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr1_3:44729486-44729505 Msa0120080:intron 20.0%
!!! TGTATTCCTTAATGTTTTAA+TGG - chr1_3:44729902-44729921 Msa0120080:intron 20.0%
!! AAAATTTACATACATTGGAA+TGG - chr1_3:44730348-44730367 Msa0120080:intron 20.0%
!! TATTCATATGTTACATTTCA+AGG + chr1_3:44730469-44730488 None:intergenic 20.0%
!!! CATTAGTAATTGTTTTTCTT+TGG - chr1_3:44731129-44731148 Msa0120080:intron 20.0%
!! ATATATAAAAATGTAGTCAC+AGG + chr1_3:44731277-44731296 None:intergenic 20.0%
!!! TGTGACTACATTTTTATATA+TGG - chr1_3:44731276-44731295 Msa0120080:CDS 20.0%
!! TATTTAGTAAGTGAAATAGA+GGG + chr1_3:44731410-44731429 None:intergenic 20.0%
!! ATATTTAGTAAGTGAAATAG+AGG + chr1_3:44731411-44731430 None:intergenic 20.0%
!!! AACATATTCATCTTCATTTT+TGG + chr1_3:44731471-44731490 None:intergenic 20.0%
!! TGAAGATGAATATGTTAAAT+TGG - chr1_3:44731475-44731494 Msa0120080:CDS 20.0%
!! TAATATGGTATTGTATATTG+TGG - chr1_3:44731984-44732003 Msa0120080:intron 20.0%
! ATTACAACATTGGAATTGAA+TGG + chr1_3:44715963-44715982 None:intergenic 25.0%
! GAAATTGAAAATTAGGGTTT+GGG + chr1_3:44716189-44716208 None:intergenic 25.0%
! AGAAATTGAAAATTAGGGTT+TGG + chr1_3:44716190-44716209 None:intergenic 25.0%
! TTTCTTAATTAGTGTCCTTA+GGG - chr1_3:44716439-44716458 Msa0120080:exon 25.0%
! ATTGGAGTTACTATGAAAAT+TGG - chr1_3:44716525-44716544 Msa0120080:CDS 25.0%
!!! GTGAAAAATGTTTTTGTTTG+TGG - chr1_3:44716748-44716767 Msa0120080:CDS 25.0%
! GGTATTCTTTATAAAGAAGA+AGG - chr1_3:44717150-44717169 Msa0120080:intron 25.0%
! ACAATTCTAATGAGTATGAT+CGG - chr1_3:44717447-44717466 Msa0120080:CDS 25.0%
! CATTAATAAGCACATATTCA+AGG + chr1_3:44717485-44717504 None:intergenic 25.0%
! GTTCTATGAATTACTTAGTA+AGG - chr1_3:44717579-44717598 Msa0120080:intron 25.0%
! AATGTATTGCCATGATTTAT+GGG + chr1_3:44717739-44717758 None:intergenic 25.0%
! TAATGTATTGCCATGATTTA+TGG + chr1_3:44717740-44717759 None:intergenic 25.0%
! CATTATAGAATCAAATCATG+CGG - chr1_3:44717790-44717809 Msa0120080:intron 25.0%
! ATTATAGAATCAAATCATGC+GGG - chr1_3:44717791-44717810 Msa0120080:intron 25.0%
! TAGAATATTGAAGAACAGAA+TGG - chr1_3:44718097-44718116 Msa0120080:intron 25.0%
! TATAATAGAAACAAAGACAG+GGG - chr1_3:44718137-44718156 Msa0120080:intron 25.0%
! TAAACAATAATGCTGCATAT+GGG + chr1_3:44718206-44718225 None:intergenic 25.0%
! ACATATCAAATAAAGTATGC+TGG + chr1_3:44718310-44718329 None:intergenic 25.0%
! TGATATGTTTAGGAACATAA+TGG - chr1_3:44718322-44718341 Msa0120080:intron 25.0%
! GATATGTTTAGGAACATAAT+GGG - chr1_3:44718323-44718342 Msa0120080:intron 25.0%
!!! CATAATGGGATGTATTTTAA+TGG - chr1_3:44718337-44718356 Msa0120080:intron 25.0%
! TGATTAGTGTTGTCAAATAT+CGG - chr1_3:44718933-44718952 Msa0120080:intron 25.0%
!! TATAAATAGGAGTATATGCA+AGG - chr1_3:44719272-44719291 Msa0120080:intron 25.0%
! TAAGAAAAAAGCAGAAATCA+TGG - chr1_3:44719807-44719826 Msa0120080:intron 25.0%
!!! ATGAATTTTGGTCTTCAATT+AGG + chr1_3:44720101-44720120 None:intergenic 25.0%
! AATTGAAGACCAAAATTCAT+TGG - chr1_3:44720101-44720120 Msa0120080:CDS 25.0%
! ATTGAAGACCAAAATTCATT+GGG - chr1_3:44720102-44720121 Msa0120080:CDS 25.0%
!!! TCAGTAAATAAAAGGTGTTA+TGG + chr1_3:44720183-44720202 None:intergenic 25.0%
! AAAAAATAAAACTTTCCCCT+GGG + chr1_3:44720390-44720409 None:intergenic 25.0%
! CGAGGAATATTTGTATAAAT+AGG - chr1_3:44720530-44720549 Msa0120080:intron 25.0%
! GGAATATTTGTATAAATAGG+AGG - chr1_3:44720533-44720552 Msa0120080:intron 25.0%
! TGTATAAATAGGAGGATAAA+AGG - chr1_3:44720541-44720560 Msa0120080:intron 25.0%
! TTTAGTAATTGGGAATATAG+TGG - chr1_3:44720588-44720607 Msa0120080:intron 25.0%
!!! TAGTATCGGAATATTTTCTT+TGG + chr1_3:44721193-44721212 None:intergenic 25.0%
! ATCATGTATATGCAGTAATT+GGG + chr1_3:44721317-44721336 None:intergenic 25.0%
! AATCATGTATATGCAGTAAT+TGG + chr1_3:44721318-44721337 None:intergenic 25.0%
! CAAAATAGATCATCATTATG+CGG - chr1_3:44721552-44721571 Msa0120080:intron 25.0%
!!! GTGTCATTTATAAAAATCGA+GGG - chr1_3:44721817-44721836 Msa0120080:CDS 25.0%
!! TGTCATTTATAAAAATCGAG+GGG - chr1_3:44721818-44721837 Msa0120080:CDS 25.0%
! TGAACAAAAACAAAATGACT+TGG + chr1_3:44721914-44721933 None:intergenic 25.0%
!! AGACAAACCCTTAATTTTTA+GGG + chr1_3:44722021-44722040 None:intergenic 25.0%
!! AATTTAGTGCTTTTCTTAGA+AGG - chr1_3:44722125-44722144 Msa0120080:intron 25.0%
! CAAGAATCAGAATGAAAATA+AGG + chr1_3:44722345-44722364 None:intergenic 25.0%
!! TTGTTTCCCAAATTTTTACT+GGG - chr1_3:44722362-44722381 Msa0120080:intron 25.0%
! CTAAAAATATTAGGGCTATT+TGG + chr1_3:44722506-44722525 None:intergenic 25.0%
!!! TGTGTTCTTTTAAAGTTAGA+AGG + chr1_3:44722615-44722634 None:intergenic 25.0%
!! AGCTATAGCCATATTATTTT+TGG + chr1_3:44722779-44722798 None:intergenic 25.0%
!! TATTGTCTATAGTTTTTCAC+GGG - chr1_3:44723142-44723161 Msa0120080:intron 25.0%
!! CAGGGTTTCTTTTTATATAT+AGG - chr1_3:44723242-44723261 Msa0120080:intron 25.0%
! TTATATATAGGTTAAACTGG+AGG - chr1_3:44723254-44723273 Msa0120080:intron 25.0%
! TATATATAGGTTAAACTGGA+GGG - chr1_3:44723255-44723274 Msa0120080:intron 25.0%
!! TATAGAAAGATTTTCCAAAG+CGG + chr1_3:44723486-44723505 None:intergenic 25.0%
! AAAATCTTTCTATACTACTC+AGG - chr1_3:44723492-44723511 Msa0120080:intron 25.0%
!!! TTGATAGCAGCATTTTTTTT+TGG - chr1_3:44723694-44723713 Msa0120080:intron 25.0%
! TTTAATGACTGTGAAAAGTT+CGG + chr1_3:44723746-44723765 None:intergenic 25.0%
! AAATATATTGGCCAAAAAAC+TGG - chr1_3:44724099-44724118 Msa0120080:intron 25.0%
! GAAATGATATTACTTATGCT+AGG - chr1_3:44724138-44724157 Msa0120080:intron 25.0%
! TTCATAAAATCTTCAGACAA+AGG + chr1_3:44724279-44724298 None:intergenic 25.0%
!!! AAACCCTTACATTTGTTTTA+TGG - chr1_3:44724356-44724375 Msa0120080:intron 25.0%
! GTACCATAAAACAAATGTAA+GGG + chr1_3:44724362-44724381 None:intergenic 25.0%
! TGTACCATAAAACAAATGTA+AGG + chr1_3:44724363-44724382 None:intergenic 25.0%
!! TTATTTCTTAAAAGTTGCAC+CGG - chr1_3:44724631-44724650 Msa0120080:intron 25.0%
! TATTGTATAAGTGTGTGAAA+AGG + chr1_3:44725210-44725229 None:intergenic 25.0%
! CTTATACAATAAGCAACTTA+AGG - chr1_3:44725219-44725238 Msa0120080:intron 25.0%
! ATACATATATATGGAGAAAG+GGG + chr1_3:44725271-44725290 None:intergenic 25.0%
! CTCCATATATATGTATATTC+GGG - chr1_3:44725275-44725294 Msa0120080:intron 25.0%
! TACCCGAATATACATATATA+TGG + chr1_3:44725280-44725299 None:intergenic 25.0%
!!! TATTTTTATTTTGTCATCCC+CGG + chr1_3:44725963-44725982 None:intergenic 25.0%
!! TTTTCACATAAAGCAAATTG+CGG + chr1_3:44726328-44726347 None:intergenic 25.0%
!! TACATTTGGTAAATTTTCCA+AGG - chr1_3:44726653-44726672 Msa0120080:intron 25.0%
! AGATGTGAAACAAATATTAG+AGG - chr1_3:44726831-44726850 Msa0120080:CDS 25.0%
! ACAGAATTTATAGATTGTCT+TGG - chr1_3:44727339-44727358 Msa0120080:intron 25.0%
! TTGGTATGTGATATGTAAAT+AGG - chr1_3:44727358-44727377 Msa0120080:intron 25.0%
! TTAAACATGAAACCAGAATA+GGG + chr1_3:44727430-44727449 None:intergenic 25.0%
! ATTAAACATGAAACCAGAAT+AGG + chr1_3:44727431-44727450 None:intergenic 25.0%
! CTTTATTATATTCTGACACT+TGG - chr1_3:44727544-44727563 Msa0120080:intron 25.0%
! TGAAAATAAGTTATACTGCT+TGG - chr1_3:44727594-44727613 Msa0120080:intron 25.0%
! AATTGTTAACAATCTAACTG+AGG - chr1_3:44728001-44728020 Msa0120080:intron 25.0%
!! TAATTTTCTTTTGATGTTGC+AGG - chr1_3:44728077-44728096 Msa0120080:intron 25.0%
!!! AGAAGATCAAGTTGATATTT+TGG - chr1_3:44728203-44728222 Msa0120080:intron 25.0%
! ACAGAGATTGGAATATAAAA+AGG + chr1_3:44728393-44728412 None:intergenic 25.0%
! TGATATAACTAAACAGAGAT+TGG + chr1_3:44728405-44728424 None:intergenic 25.0%
!! ATTTTCTGTGTAATTGAAAC+TGG - chr1_3:44728501-44728520 Msa0120080:intron 25.0%
!! GTTAACTATTATCCCATTTT+AGG + chr1_3:44728611-44728630 None:intergenic 25.0%
!! ACTTGTTGATTAGCAATATT+AGG - chr1_3:44728629-44728648 Msa0120080:intron 25.0%
! GTGATTCTATAATCAATTGT+AGG + chr1_3:44728991-44729010 None:intergenic 25.0%
! TTGAGAAAATGAACAGTAAT+AGG + chr1_3:44729111-44729130 None:intergenic 25.0%
!!! TCCAATGGTTTTATTACATT+CGG - chr1_3:44729242-44729261 Msa0120080:intron 25.0%
! AATATAAGTCAGTACATACA+TGG + chr1_3:44729635-44729654 None:intergenic 25.0%
! TTGTAAAACAAAACGAATTC+AGG + chr1_3:44729933-44729952 None:intergenic 25.0%
!!! TTTGTTTTACAAACAGATAC+TGG - chr1_3:44729941-44729960 Msa0120080:intron 25.0%
! TACATATGCATCCTATAATT+CGG - chr1_3:44730254-44730273 Msa0120080:intron 25.0%
! ATACATTGGAATGGTTATTT+GGG - chr1_3:44730357-44730376 Msa0120080:intron 25.0%
!! AAGGATAAATTTGAGATCTT+TGG + chr1_3:44730386-44730405 None:intergenic 25.0%
! ACGATTATAAGAACAGAATT+TGG - chr1_3:44730726-44730745 Msa0120080:intron 25.0%
! CGATTATAAGAACAGAATTT+GGG - chr1_3:44730727-44730746 Msa0120080:intron 25.0%
! AAGAAAGAACAGTTTACAAA+GGG + chr1_3:44730777-44730796 None:intergenic 25.0%
! AAAGAAAGAACAGTTTACAA+AGG + chr1_3:44730778-44730797 None:intergenic 25.0%
! ACATGTGAATCTTTATACAT+GGG - chr1_3:44730837-44730856 Msa0120080:intron 25.0%
! TCACAAAGTAAAACATGAAA+CGG + chr1_3:44731008-44731027 None:intergenic 25.0%
!! AATGAAACTTACTGACATTT+TGG - chr1_3:44731076-44731095 Msa0120080:intron 25.0%
! ACTAATGTGACAAAATAAGT+TGG + chr1_3:44731116-44731135 None:intergenic 25.0%
!!! AACTTTTAGTTTGATAAGAC+TGG + chr1_3:44731211-44731230 None:intergenic 25.0%
!! TATGGACTAATTTATCAACT+TGG - chr1_3:44731294-44731313 Msa0120080:CDS 25.0%
!! TATCCAACTTTTAACATTTC+AGG - chr1_3:44731428-44731447 Msa0120080:CDS 25.0%
! CATCCGTTAATATTAAGTTT+CGG + chr1_3:44731794-44731813 None:intergenic 25.0%
!! TTATAGGTGGAGTATTAATA+TGG - chr1_3:44731969-44731988 Msa0120080:intron 25.0%
! TTGTATATTGTGGTTACTAA+TGG - chr1_3:44731994-44732013 Msa0120080:intron 25.0%
!!! CATAGATTGCCAATTTTTTT+GGG - chr1_3:44732060-44732079 Msa0120080:intron 25.0%
! CATTTCTTTCCCAAAAAAAT+TGG + chr1_3:44732072-44732091 None:intergenic 25.0%
! GATATTTGGACTATAATTCA+GGG + chr1_3:44732200-44732219 None:intergenic 25.0%
! CTGAATTATAGTCCAAATAT+CGG - chr1_3:44732199-44732218 Msa0120080:five_prime_UTR 25.0%
!! AATGACATTCTAGAAAAGAA+AGG + chr1_3:44732356-44732375 None:intergenic 25.0%
AATAATGGTGGCATGATAAA+AGG - chr1_3:44715890-44715909 Msa0120080:three_prime_UTR 30.0%
ATAATGGTGGCATGATAAAA+GGG - chr1_3:44715891-44715910 Msa0120080:three_prime_UTR 30.0%
! TGTTTCGTTGATTACAACAT+TGG + chr1_3:44715973-44715992 None:intergenic 30.0%
AGAAGAAGGTGAAGATTAAA+GGG + chr1_3:44716110-44716129 None:intergenic 30.0%
CTTTCTTAATTAGTGTCCTT+AGG - chr1_3:44716438-44716457 Msa0120080:exon 30.0%
! TTTACGAAGAACTACGATTT+TGG - chr1_3:44716555-44716574 Msa0120080:CDS 30.0%
!! TTTTGGTCTTTGAATGTATG+AGG - chr1_3:44716572-44716591 Msa0120080:CDS 30.0%
!! AAATGTTTTTGTTTGTGGGT+AGG - chr1_3:44716753-44716772 Msa0120080:CDS 30.0%
AATGGAAAAGAAAAGGAGTT+AGG - chr1_3:44716817-44716836 Msa0120080:CDS 30.0%
!! TTTTTCAGAAGCTGTTAAGT+TGG - chr1_3:44717095-44717114 Msa0120080:intron 30.0%
! AACAAGAAAACTTTTCCATG+TGG + chr1_3:44717311-44717330 None:intergenic 30.0%
TCCATCTTACATAACTTTCT+AGG - chr1_3:44717392-44717411 Msa0120080:intron 30.0%
ACCTAGAAAGTTATGTAAGA+TGG + chr1_3:44717396-44717415 None:intergenic 30.0%
TTATAGAATCAAATCATGCG+GGG - chr1_3:44717792-44717811 Msa0120080:intron 30.0%
CTTCTCACTTAAATCTAAGT+GGG + chr1_3:44717861-44717880 None:intergenic 30.0%
TCTTCTCACTTAAATCTAAG+TGG + chr1_3:44717862-44717881 None:intergenic 30.0%
ATTGAAGAACAGAATGGTAT+AGG - chr1_3:44718103-44718122 Msa0120080:intron 30.0%
GTAAACAATAATGCTGCATA+TGG + chr1_3:44718207-44718226 None:intergenic 30.0%
TATGCAGCATTATTGTTTAC+TGG - chr1_3:44718207-44718226 Msa0120080:intron 30.0%
AGCACTAAAAAATCAATCTG+TGG + chr1_3:44718379-44718398 None:intergenic 30.0%
ATGAGCTTACATAGAAATCT+CGG + chr1_3:44718524-44718543 None:intergenic 30.0%
AGATTTCTATGTAAGCTCAT+GGG - chr1_3:44718524-44718543 Msa0120080:CDS 30.0%
!! TAGCATGGGTTTTTAAAAAG+TGG + chr1_3:44718596-44718615 None:intergenic 30.0%
ATTCTGATTTAGTCTAGCAT+GGG + chr1_3:44718610-44718629 None:intergenic 30.0%
AAGAAATGAAAAATCGGGTT+AGG + chr1_3:44718633-44718652 None:intergenic 30.0%
TCGAGAAGAAATGAAAAATC+GGG + chr1_3:44718638-44718657 None:intergenic 30.0%
CTCGAGAAGAAATGAAAAAT+CGG + chr1_3:44718639-44718658 None:intergenic 30.0%
AGAGCAACTAGTTAGTTATT+TGG - chr1_3:44719238-44719257 Msa0120080:intron 30.0%
AAAATGGGTATTATGCAAGT+TGG - chr1_3:44719996-44720015 Msa0120080:intron 30.0%
AAATGGGTATTATGCAAGTT+GGG - chr1_3:44719997-44720016 Msa0120080:intron 30.0%
TCAGATACTATCAGCATATT+GGG + chr1_3:44720048-44720067 None:intergenic 30.0%
ATCAGATACTATCAGCATAT+TGG + chr1_3:44720049-44720068 None:intergenic 30.0%
AATATGCTGATAGTATCTGA+TGG - chr1_3:44720048-44720067 Msa0120080:CDS 30.0%
ATATGCTGATAGTATCTGAT+GGG - chr1_3:44720049-44720068 Msa0120080:CDS 30.0%
CGAAATGGTCAGTAAATAAA+AGG + chr1_3:44720191-44720210 None:intergenic 30.0%
TGGGAAAGATTTATCATCAT+TGG - chr1_3:44720253-44720272 Msa0120080:intron 30.0%
GAAAAAATAAAACTTTCCCC+TGG + chr1_3:44720391-44720410 None:intergenic 30.0%
TCATCAACTATTAAACATGC+TGG - chr1_3:44720409-44720428 Msa0120080:intron 30.0%
TTTAGTATATTGCAACCTTG+AGG - chr1_3:44720434-44720453 Msa0120080:intron 30.0%
TCTTTGGTTACAACTATCAT+GGG + chr1_3:44721177-44721196 None:intergenic 30.0%
TTCTTTGGTTACAACTATCA+TGG + chr1_3:44721178-44721197 None:intergenic 30.0%
!! CTTCTGAAATCAACTAGTAT+CGG + chr1_3:44721207-44721226 None:intergenic 30.0%
AAAAGGAAAAATGCAGGAAA+AGG + chr1_3:44721593-44721612 None:intergenic 30.0%
ATTCATATTATGCAGGCAAA+AGG + chr1_3:44721649-44721668 None:intergenic 30.0%
TGAAATGATGCAATATGACA+TGG - chr1_3:44721728-44721747 Msa0120080:CDS 30.0%
!!! AGCTTTTTCATAGAAAGTCA+GGG + chr1_3:44721754-44721773 None:intergenic 30.0%
!! GGTGTCATTTATAAAAATCG+AGG - chr1_3:44721816-44721835 Msa0120080:CDS 30.0%
TTATAAAAATCGAGGGGATT+TGG - chr1_3:44721824-44721843 Msa0120080:CDS 30.0%
! GAGACAAACCCTTAATTTTT+AGG + chr1_3:44722022-44722041 None:intergenic 30.0%
TTGCTTGTCTTAGCTTAAAA+AGG - chr1_3:44722210-44722229 Msa0120080:intron 30.0%
TGCTTGTCTTAGCTTAAAAA+GGG - chr1_3:44722211-44722230 Msa0120080:intron 30.0%
GAATGAAAATAAGGACAGTT+TGG + chr1_3:44722336-44722355 None:intergenic 30.0%
! CTTGTTTCCCAAATTTTTAC+TGG - chr1_3:44722361-44722380 Msa0120080:intron 30.0%
ACTGTTCCCAGTAAAAATTT+GGG + chr1_3:44722371-44722390 None:intergenic 30.0%
! TTAGAAGAAGCACAAACAAA+TGG - chr1_3:44722641-44722660 Msa0120080:intron 30.0%
! CATGATCAATTACTCTTTTG+TGG - chr1_3:44722718-44722737 Msa0120080:intron 30.0%
CGAGATTGCCAAAAATAATA+TGG - chr1_3:44722768-44722787 Msa0120080:intron 30.0%
TTCTAGGTAATAATAGTGCA+AGG - chr1_3:44723010-44723029 Msa0120080:intron 30.0%
TCTAGGTAATAATAGTGCAA+GGG - chr1_3:44723011-44723030 Msa0120080:intron 30.0%
! TCCTAAAATTTGTTCCTAGA+GGG + chr1_3:44723066-44723085 None:intergenic 30.0%
! TTCCTAAAATTTGTTCCTAG+AGG + chr1_3:44723067-44723086 None:intergenic 30.0%
TGAGGAATAGAAAGAAAGAA+AGG + chr1_3:44723170-44723189 None:intergenic 30.0%
CTGATGCTATGTATAATCTT+GGG - chr1_3:44723337-44723356 Msa0120080:intron 30.0%
TGATGCTATGTATAATCTTG+GGG - chr1_3:44723338-44723357 Msa0120080:intron 30.0%
TGAGATGCTTAAGTTTGATA+TGG - chr1_3:44723371-44723390 Msa0120080:intron 30.0%
TCACAGTCATTAAATAACCT+TGG - chr1_3:44723752-44723771 Msa0120080:intron 30.0%
AAAATCGAACATTGCTTACT+TGG + chr1_3:44723793-44723812 None:intergenic 30.0%
TTATCTTCTCTAATTTCTCC+AGG - chr1_3:44723855-44723874 Msa0120080:CDS 30.0%
TATCTTCTCTAATTTCTCCA+GGG - chr1_3:44723856-44723875 Msa0120080:CDS 30.0%
AAACAACTAACGTATCAGAA+AGG + chr1_3:44723980-44723999 None:intergenic 30.0%
TTTCTGATACGTTAGTTGTT+TGG - chr1_3:44723979-44723998 Msa0120080:intron 30.0%
TAAAATCTTCAGACAAAGGA+AGG + chr1_3:44724275-44724294 None:intergenic 30.0%
!! CTTTTCTATTCTTGTTATGC+AGG - chr1_3:44724389-44724408 Msa0120080:CDS 30.0%
TTTCACAGTCAAAATGAAGA+AGG + chr1_3:44724847-44724866 None:intergenic 30.0%
!!! CTTCATTTTGACTGTGAAAA+AGG - chr1_3:44724848-44724867 Msa0120080:intron 30.0%
TCTGTGATTAACTCCATATT+TGG + chr1_3:44725076-44725095 None:intergenic 30.0%
TTATAAACCCGTGTTAAGTT+GGG + chr1_3:44725102-44725121 None:intergenic 30.0%
TTTATAAACCCGTGTTAAGT+TGG + chr1_3:44725103-44725122 None:intergenic 30.0%
TACATATATATGGAGAAAGG+GGG + chr1_3:44725270-44725289 None:intergenic 30.0%
TATATTCGGGTATACTATGA+TGG - chr1_3:44725288-44725307 Msa0120080:intron 30.0%
ACAGAACATATTCACAATGA+GGG + chr1_3:44725367-44725386 None:intergenic 30.0%
TATGTTCTGTGTTTCTTTCA+TGG - chr1_3:44725377-44725396 Msa0120080:intron 30.0%
! TGATAGAAAGTGTAGATGAT+TGG - chr1_3:44725560-44725579 Msa0120080:CDS 30.0%
ATAAAACAATGAAGATGGTC+CGG + chr1_3:44725909-44725928 None:intergenic 30.0%
CCATAAACAACATTATCAAC+AGG + chr1_3:44726070-44726089 None:intergenic 30.0%
!! CCTGTTGATAATGTTGTTTA+TGG - chr1_3:44726067-44726086 Msa0120080:intron 30.0%
! GATAATGTTGTTTATGGTGA+TGG - chr1_3:44726073-44726092 Msa0120080:intron 30.0%
CACATAAAAAACGTTACTTG+TGG + chr1_3:44726230-44726249 None:intergenic 30.0%
TATGTGATCAATGAAATGCA+TGG - chr1_3:44726244-44726263 Msa0120080:intron 30.0%
TGAAATGCATGGTTTATAAC+TGG - chr1_3:44726255-44726274 Msa0120080:intron 30.0%
TCAAAATAACGTTTCCTTTC+AGG - chr1_3:44726377-44726396 Msa0120080:intron 30.0%
CAAAATAACGTTTCCTTTCA+GGG - chr1_3:44726378-44726397 Msa0120080:intron 30.0%
ACAGAGTGTGTAAAATAATC+AGG + chr1_3:44726499-44726518 None:intergenic 30.0%
TTAAGTTTATCTGTACTCCA+CGG - chr1_3:44726718-44726737 Msa0120080:intron 30.0%
GAAACAAATATTAGAGGAGT+TGG - chr1_3:44726837-44726856 Msa0120080:CDS 30.0%
!!! AGTTGGAGACTTTTTTTTCA+CGG - chr1_3:44726854-44726873 Msa0120080:CDS 30.0%
!!! AGACTTTTTTTTCACGGTAA+CGG - chr1_3:44726860-44726879 Msa0120080:CDS 30.0%
AGAAAGTTTCTCAATCTTTG+CGG - chr1_3:44726922-44726941 Msa0120080:intron 30.0%
AGTGACATTTCCTTCAAAAA+AGG + chr1_3:44726993-44727012 None:intergenic 30.0%
!! ACTTTTCAAGAATTTGCTTC+TGG - chr1_3:44727010-44727029 Msa0120080:intron 30.0%
AGTACGTTTCAATACTATGT+TGG + chr1_3:44727089-44727108 None:intergenic 30.0%
AGAAAAAAATTGGAATCGGA+GGG + chr1_3:44727112-44727131 None:intergenic 30.0%
AAGAAAAAAATTGGAATCGG+AGG + chr1_3:44727113-44727132 None:intergenic 30.0%
TCTCTCTCTGCAATAAATAA+GGG + chr1_3:44727249-44727268 None:intergenic 30.0%
TTCTCTCTCTGCAATAAATA+AGG + chr1_3:44727250-44727269 None:intergenic 30.0%
TGATATGTAAATAGGAACTG+AGG - chr1_3:44727366-44727385 Msa0120080:intron 30.0%
GATATGTAAATAGGAACTGA+GGG - chr1_3:44727367-44727386 Msa0120080:intron 30.0%
AATAAGTTATACTGCTTGGT+TGG - chr1_3:44727598-44727617 Msa0120080:intron 30.0%
!!! ACTAAAGGTTAGTTTTCCAA+TGG + chr1_3:44727635-44727654 None:intergenic 30.0%
TAGAGAGAAAGTCATAAAGA+AGG - chr1_3:44728122-44728141 Msa0120080:intron 30.0%
AGAGAGAAAGTCATAAAGAA+GGG - chr1_3:44728123-44728142 Msa0120080:intron 30.0%
!!! GATATTTTGGTAGAACTTAC+TGG - chr1_3:44728216-44728235 Msa0120080:intron 30.0%
TCATACTGCAAACAATAAGT+TGG - chr1_3:44728239-44728258 Msa0120080:intron 30.0%
CATACTGCAAACAATAAGTT+GGG - chr1_3:44728240-44728259 Msa0120080:intron 30.0%
! AAACAATAAGTTGGGAATGA+TGG - chr1_3:44728248-44728267 Msa0120080:intron 30.0%
TTCGTTAAAAATACCTGAAC+TGG + chr1_3:44728288-44728307 None:intergenic 30.0%
TCTGTGATATTTAGTAAGCA+AGG + chr1_3:44728361-44728380 None:intergenic 30.0%
CTTTGACAGTAAATTGAAAC+TGG - chr1_3:44728531-44728550 Msa0120080:intron 30.0%
ATATATACTAGCAATTAGCC+AGG + chr1_3:44728585-44728604 None:intergenic 30.0%
AGATCAATGACAAGAATGTA+CGG + chr1_3:44729070-44729089 None:intergenic 30.0%
AAGTTATGTTTCCTGTATAC+AGG - chr1_3:44729129-44729148 Msa0120080:intron 30.0%
ACCGAATGTAATAAAACCAT+TGG + chr1_3:44729246-44729265 None:intergenic 30.0%
!!! TATTTTAACACACACTACCT+TGG + chr1_3:44729285-44729304 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_3:44729317-44729336 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr1_3:44729318-44729337 Msa0120080:intron 30.0%
!! AACAGATACTGGTTTAATGT+TGG - chr1_3:44729952-44729971 Msa0120080:intron 30.0%
CTAGTTGAGTCAAATATTTC+AGG + chr1_3:44730103-44730122 None:intergenic 30.0%
CTGAAATATTTGACTCAACT+AGG - chr1_3:44730101-44730120 Msa0120080:intron 30.0%
TACACAAAAACCTATGCATT+TGG - chr1_3:44730138-44730157 Msa0120080:intron 30.0%
ATTGTAAGTTCCAAATGCAT+AGG + chr1_3:44730151-44730170 None:intergenic 30.0%
! TTTAGTCAAAGATGTTTCTG+AGG - chr1_3:44730192-44730211 Msa0120080:intron 30.0%
ATAGTGAATCACCGAATTAT+AGG + chr1_3:44730268-44730287 None:intergenic 30.0%
GTGATTCACTATTTATACCA+AGG - chr1_3:44730276-44730295 Msa0120080:intron 30.0%
TTCACTATTTATACCAAGGT+CGG - chr1_3:44730280-44730299 Msa0120080:intron 30.0%
ATGCTAATTACTGAATAGCA+TGG - chr1_3:44730312-44730331 Msa0120080:intron 30.0%
CATACATTGGAATGGTTATT+TGG - chr1_3:44730356-44730375 Msa0120080:intron 30.0%
ATCTCAAATTTATCCTTTGC+TGG - chr1_3:44730389-44730408 Msa0120080:intron 30.0%
AGAGTAGTCTATCTATGTAA+TGG - chr1_3:44730437-44730456 Msa0120080:intron 30.0%
CATATGTTACATTTCAAGGA+AGG + chr1_3:44730465-44730484 None:intergenic 30.0%
TGACGACGATTTACAAATAT+AGG - chr1_3:44730508-44730527 Msa0120080:intron 30.0%
!! ATAGGATACACGTTATTTCT+TGG - chr1_3:44730526-44730545 Msa0120080:intron 30.0%
! CTGTTCTTTCTTTTGTAGTT+TGG - chr1_3:44730785-44730804 Msa0120080:intron 30.0%
GACATGTGAATCTTTATACA+TGG - chr1_3:44730836-44730855 Msa0120080:intron 30.0%
AGACCTGAAATGTTAAAAGT+TGG + chr1_3:44731434-44731453 None:intergenic 30.0%
!! AACTTTTAACATTTCAGGTC+TGG - chr1_3:44731433-44731452 Msa0120080:CDS 30.0%
!! ATTCTCAAGTTTTGTAATGC+TGG + chr1_3:44731524-44731543 None:intergenic 30.0%
AGTCAACATATAGGAATATG+TGG - chr1_3:44731609-44731628 Msa0120080:intron 30.0%
CCACCGAAACTTAATATTAA+CGG - chr1_3:44731788-44731807 Msa0120080:intron 30.0%
TTGAAATTCAGTAGTAAGCA+GGG - chr1_3:44731833-44731852 Msa0120080:intron 30.0%
CTTACAACTACTGTATTTCA+AGG + chr1_3:44731869-44731888 None:intergenic 30.0%
AAATACAGTAGTTGTAAGCA+GGG - chr1_3:44731871-44731890 Msa0120080:intron 30.0%
!!! GCATAGATTGCCAATTTTTT+TGG - chr1_3:44732059-44732078 Msa0120080:intron 30.0%
CGATATTTGGACTATAATTC+AGG + chr1_3:44732201-44732220 None:intergenic 30.0%
TACAAAGTGATGTCAAATAG+CGG - chr1_3:44732244-44732263 Msa0120080:five_prime_UTR 30.0%
!!! CTTTTCTAGAATGTCATTGT+TGG - chr1_3:44732358-44732377 Msa0120080:five_prime_UTR 30.0%
TTTATCCGATTGAATGCAAA+AGG - chr1_3:44732401-44732420 Msa0120080:five_prime_UTR 30.0%
! AAATGCCTTTTGCATTCAAT+CGG + chr1_3:44732409-44732428 None:intergenic 30.0%
TAATGGTGGCATGATAAAAG+GGG - chr1_3:44715892-44715911 Msa0120080:three_prime_UTR 35.0%
GAGAAGAAGGTGAAGATTAA+AGG + chr1_3:44716111-44716130 None:intergenic 35.0%
ACTAAAAACCCTAGCAAGTA+CGG + chr1_3:44716235-44716254 None:intergenic 35.0%
TTTGCGATTTCGATACATTC+AGG + chr1_3:44716614-44716633 None:intergenic 35.0%
ATGTCATTATAGTCCCTTGA+GGG + chr1_3:44716639-44716658 None:intergenic 35.0%
! AAACTGGAAGATAGCCATTT+TGG + chr1_3:44716681-44716700 None:intergenic 35.0%
!!! TGGCTATCTTCCAGTTTTTT+TGG - chr1_3:44716684-44716703 Msa0120080:CDS 35.0%
!!! CTTCCAGTTTTTTTGGTCAT+TGG - chr1_3:44716691-44716710 Msa0120080:CDS 35.0%
ATGCCAATGACCAAAAAAAC+TGG + chr1_3:44716697-44716716 None:intergenic 35.0%
CTTGGATGGAAGAAAATGAT+GGG - chr1_3:44716794-44716813 Msa0120080:CDS 35.0%
! ATGGAAGAAAATGATGGGAA+TGG - chr1_3:44716799-44716818 Msa0120080:CDS 35.0%
TGATGGGAATGGAAAAGAAA+AGG - chr1_3:44716810-44716829 Msa0120080:CDS 35.0%
ACTGCTGTATCATCTACAAA+TGG + chr1_3:44717281-44717300 None:intergenic 35.0%
ATCTATAGTCACCACTAAGT+CGG + chr1_3:44717355-44717374 None:intergenic 35.0%
!! AATTACTTAGTAAGGGCACT+TGG - chr1_3:44717587-44717606 Msa0120080:intron 35.0%
ATCACTGCAAGGATTTACAA+GGG + chr1_3:44717820-44717839 None:intergenic 35.0%
TATCACTGCAAGGATTTACA+AGG + chr1_3:44717821-44717840 None:intergenic 35.0%
TAGCAACATATATCACTGCA+AGG + chr1_3:44717831-44717850 None:intergenic 35.0%
TCTACATATCATAGCCATCA+TGG - chr1_3:44717883-44717902 Msa0120080:intron 35.0%
ACTGTATTGAACTTGTATCC+AGG + chr1_3:44717926-44717945 None:intergenic 35.0%
TCAGGTTCTTGATTTCAGTA+TGG + chr1_3:44717964-44717983 None:intergenic 35.0%
ATAGGTACTAAGGAACTGAA+TGG + chr1_3:44718042-44718061 None:intergenic 35.0%
AAATTCTTTGCTCGCTACAT+AGG + chr1_3:44718060-44718079 None:intergenic 35.0%
! TCTGTTGGTTAAGAAAGAGT+GGG + chr1_3:44718172-44718191 None:intergenic 35.0%
GCTATTTATCGTTAGTGTCA+TGG - chr1_3:44718396-44718415 Msa0120080:intron 35.0%
AGTGTCATGGTAGTTAAAAG+TGG - chr1_3:44718409-44718428 Msa0120080:intron 35.0%
GTGTCATGGTAGTTAAAAGT+GGG - chr1_3:44718410-44718429 Msa0120080:intron 35.0%
TGTCATGGTAGTTAAAAGTG+GGG - chr1_3:44718411-44718430 Msa0120080:intron 35.0%
! TCAAGATTTTCCTGTGAATC+AGG + chr1_3:44718487-44718506 None:intergenic 35.0%
AAATCTTGAGTGTGTTGGAT+TGG - chr1_3:44718498-44718517 Msa0120080:CDS 35.0%
GAGATTTCTATGTAAGCTCA+TGG - chr1_3:44718523-44718542 Msa0120080:CDS 35.0%
GATTCTGATTTAGTCTAGCA+TGG + chr1_3:44718611-44718630 None:intergenic 35.0%
! GCAATATCATTGATTGCGAT+GGG + chr1_3:44719101-44719120 None:intergenic 35.0%
! AGCAATATCATTGATTGCGA+TGG + chr1_3:44719102-44719121 None:intergenic 35.0%
GTCTTGTCTATGAAACTTGA+CGG - chr1_3:44719163-44719182 Msa0120080:intron 35.0%
TCTTGTCTATGAAACTTGAC+GGG - chr1_3:44719164-44719183 Msa0120080:intron 35.0%
! AAACTTGACGGGGTTAATTT+TGG - chr1_3:44719175-44719194 Msa0120080:intron 35.0%
TTGAGCAATGGAAAATTCTG+TGG - chr1_3:44719380-44719399 Msa0120080:intron 35.0%
TGGCATAACTAAGAAGTTGA+TGG - chr1_3:44719555-44719574 Msa0120080:intron 35.0%
!! ACTAAGAAGTTGATGGTCAA+CGG - chr1_3:44719562-44719581 Msa0120080:intron 35.0%
CATGGTACGATTGTAGAATA+TGG - chr1_3:44719825-44719844 Msa0120080:intron 35.0%
ACAAACAAAGAGGGGAAAAA+TGG - chr1_3:44719980-44719999 Msa0120080:intron 35.0%
CAAACAAAGAGGGGAAAAAT+GGG - chr1_3:44719981-44720000 Msa0120080:intron 35.0%
ATCTAGCCCAATTCATGATT+CGG - chr1_3:44720140-44720159 Msa0120080:CDS 35.0%
CATTGGAAACAACAGTGATT+TGG - chr1_3:44720270-44720289 Msa0120080:intron 35.0%
AGTAGTAAACAGTTACTTCG+AGG - chr1_3:44720512-44720531 Msa0120080:intron 35.0%
ATAGGAGGATAAAAGGATAG+AGG - chr1_3:44720548-44720567 Msa0120080:intron 35.0%
TAGGAGGATAAAAGGATAGA+GGG - chr1_3:44720549-44720568 Msa0120080:intron 35.0%
GGAATATAGTGGCTCAAAAA+GGG - chr1_3:44720599-44720618 Msa0120080:intron 35.0%
TAGACAAGTATAAGATCGGA+GGG + chr1_3:44720757-44720776 None:intergenic 35.0%
ATAGACAAGTATAAGATCGG+AGG + chr1_3:44720758-44720777 None:intergenic 35.0%
! TTGCGATTTTACTTGGGATA+GGG + chr1_3:44721046-44721065 None:intergenic 35.0%
! TTTGCGATTTTACTTGGGAT+AGG + chr1_3:44721047-44721066 None:intergenic 35.0%
! AAGGCTTTGCGATTTTACTT+GGG + chr1_3:44721052-44721071 None:intergenic 35.0%
AACTGTCAAACTTTGTGGTA+CGG + chr1_3:44721140-44721159 None:intergenic 35.0%
AGGTAAACTGTCAAACTTTG+TGG + chr1_3:44721145-44721164 None:intergenic 35.0%
!! AGTCATATCAAAAGGCGTTA+CGG - chr1_3:44721410-44721429 Msa0120080:intron 35.0%
ATGCTTAGCCATTGTTCTAA+CGG - chr1_3:44721462-44721481 Msa0120080:intron 35.0%
!!! CAGCTTTTTCATAGAAAGTC+AGG + chr1_3:44721755-44721774 None:intergenic 35.0%
CAATATGCTTCAGCATACAT+AGG + chr1_3:44721789-44721808 None:intergenic 35.0%
! AGAGGTACACGATATATCTA+AGG - chr1_3:44721868-44721887 Msa0120080:CDS 35.0%
! AATGTTGTCAAGAGAGCTTT+TGG - chr1_3:44721981-44722000 Msa0120080:intron 35.0%
! ATGTTGTCAAGAGAGCTTTT+GGG - chr1_3:44721982-44722001 Msa0120080:intron 35.0%
GCTTGTCTTAGCTTAAAAAG+GGG - chr1_3:44722212-44722231 Msa0120080:intron 35.0%
CACTGTTCCCAGTAAAAATT+TGG + chr1_3:44722372-44722391 None:intergenic 35.0%
AGGGCAGTTTAGTTATTGAA+GGG - chr1_3:44722443-44722462 Msa0120080:intron 35.0%
! ATCAATTACTCTTTTGTGGC+AGG - chr1_3:44722722-44722741 Msa0120080:intron 35.0%
!! TTTTTGGCAATCTCGAAGTT+AGG + chr1_3:44722763-44722782 None:intergenic 35.0%
!! GCTATAGCTTTGACAGATTT+GGG - chr1_3:44722790-44722809 Msa0120080:intron 35.0%
TTTGACAGATTTGGGAACAA+AGG - chr1_3:44722798-44722817 Msa0120080:intron 35.0%
AGTAGATGACATCATACATG+AGG + chr1_3:44722904-44722923 None:intergenic 35.0%
TAATTGAAATGAGGGCTTCT+AGG - chr1_3:44722994-44723013 Msa0120080:intron 35.0%
!! TCCCTCTAGGAACAAATTTT+AGG - chr1_3:44723062-44723081 Msa0120080:intron 35.0%
TTCTGAATTGAGAGATAGTG+TGG - chr1_3:44723092-44723111 Msa0120080:intron 35.0%
! AATGAGATGCATTGACAACT+CGG - chr1_3:44723195-44723214 Msa0120080:intron 35.0%
!!! CGGTCATTTTTTCTTGCTAA+CGG - chr1_3:44723215-44723234 Msa0120080:intron 35.0%
TCTTATAAAATGCCACACCA+CGG + chr1_3:44723290-44723309 None:intergenic 35.0%
GCTGATGCTATGTATAATCT+TGG - chr1_3:44723336-44723355 Msa0120080:intron 35.0%
TATAATCTTGGGGTTGCTTA+TGG - chr1_3:44723348-44723367 Msa0120080:intron 35.0%
! TGTAGTATTAATTGCCGCTT+TGG - chr1_3:44723469-44723488 Msa0120080:intron 35.0%
! AGCATTCTACAGCTTTATCA+AGG + chr1_3:44723609-44723628 None:intergenic 35.0%
TTGTATGCTTCTGCATATGT+CGG + chr1_3:44723931-44723950 None:intergenic 35.0%
!!! AAGCTCTGTAACCAGTTTTT+TGG + chr1_3:44724113-44724132 None:intergenic 35.0%
GATATTACTTATGCTAGGGA+AGG - chr1_3:44724143-44724162 Msa0120080:intron 35.0%
CAAATGTAAGGGTTTCAACT+GGG + chr1_3:44724351-44724370 None:intergenic 35.0%
ACAAATGTAAGGGTTTCAAC+TGG + chr1_3:44724352-44724371 None:intergenic 35.0%
TTATGCAGGAGTTCTTTACA+GGG - chr1_3:44724403-44724422 Msa0120080:CDS 35.0%
ACAGATGTACGTAGAATCTT+TGG + chr1_3:44724562-44724581 None:intergenic 35.0%
CACAACAGAGTAATTGTTGA+AGG + chr1_3:44724745-44724764 None:intergenic 35.0%
CACTTCAATATCAGTTAGAG+TGG + chr1_3:44724789-44724808 None:intergenic 35.0%
TATTCCTCTGTTGTCAAAAG+CGG + chr1_3:44725019-44725038 None:intergenic 35.0%
ACATATATATGGAGAAAGGG+GGG + chr1_3:44725269-44725288 None:intergenic 35.0%
ATATTCACAATGAGGGATGA+AGG + chr1_3:44725360-44725379 None:intergenic 35.0%
CACAGAACATATTCACAATG+AGG + chr1_3:44725368-44725387 None:intergenic 35.0%
ATGGACACAAACTTAACTGT+AGG - chr1_3:44725396-44725415 Msa0120080:intron 35.0%
GCAATGAACTACATAGATGA+AGG - chr1_3:44725681-44725700 Msa0120080:intron 35.0%
!!! ACAAACTTTTTGAAGCTCAC+AGG - chr1_3:44725712-44725731 Msa0120080:intron 35.0%
! ATAGAAGTGCAAAAGTTCGT+AGG + chr1_3:44725750-44725769 None:intergenic 35.0%
GAGCATATAATTGTACTGTG+TGG - chr1_3:44725855-44725874 Msa0120080:intron 35.0%
GTGACATGTAGTATAACTTC+CGG - chr1_3:44725941-44725960 Msa0120080:intron 35.0%
TGACATGTAGTATAACTTCC+GGG - chr1_3:44725942-44725961 Msa0120080:intron 35.0%
ATACTTATCCTGTATCTGCA+TGG - chr1_3:44725980-44725999 Msa0120080:intron 35.0%
ATGCTTACATAAGCCGTAAT+AGG + chr1_3:44726156-44726175 None:intergenic 35.0%
ACAACTCAAAAGATCCTGAA+AGG - chr1_3:44726449-44726468 Msa0120080:intron 35.0%
GATACATATCCTATCACAAG+AGG + chr1_3:44726475-44726494 None:intergenic 35.0%
GTGTAGTCATGATAGATAAG+GGG + chr1_3:44726541-44726560 None:intergenic 35.0%
GGTGTAGTCATGATAGATAA+GGG + chr1_3:44726542-44726561 None:intergenic 35.0%
TGGTGTAGTCATGATAGATA+AGG + chr1_3:44726543-44726562 None:intergenic 35.0%
TGTTTATTCAGCAGTTGTCA+AGG - chr1_3:44726576-44726595 Msa0120080:CDS 35.0%
CTCTAATTCTTAGATTGCAC+AGG + chr1_3:44726697-44726716 None:intergenic 35.0%
CTGTGCAATCTAAGAATTAG+AGG - chr1_3:44726695-44726714 Msa0120080:intron 35.0%
TTGCGGATGATTATAGATCT+AGG - chr1_3:44726939-44726958 Msa0120080:intron 35.0%
!!! ATGGTTGTCACCTTTTTTGA+AGG - chr1_3:44726980-44726999 Msa0120080:intron 35.0%
CACAACAGATATGAAGCTAT+GGG + chr1_3:44727036-44727055 None:intergenic 35.0%
TCACAACAGATATGAAGCTA+TGG + chr1_3:44727037-44727056 None:intergenic 35.0%
! TTGGAGTACCAATTAACTGT+CGG + chr1_3:44727070-44727089 None:intergenic 35.0%
TAAGTTGTAGTTCCCTATTC+TGG - chr1_3:44727415-44727434 Msa0120080:intron 35.0%
AACTGTTATGCATGAGGTTT+CGG - chr1_3:44727459-44727478 Msa0120080:intron 35.0%
ACATGGCTTACAACAACTAA+AGG + chr1_3:44727650-44727669 None:intergenic 35.0%
ACCACTAACAACTTCATACA+TGG + chr1_3:44727667-44727686 None:intergenic 35.0%
!! CTGGTTCTCATACGATATTT+TGG - chr1_3:44727753-44727772 Msa0120080:intron 35.0%
ATTGTGGTTTACAAATGCTC+AGG - chr1_3:44727812-44727831 Msa0120080:intron 35.0%
AATTGTGATGCTACTACAGA+TGG + chr1_3:44727863-44727882 None:intergenic 35.0%
ATCTGTAGTAGCATCACAAT+TGG - chr1_3:44727862-44727881 Msa0120080:intron 35.0%
AGAAAGTCATAAAGAAGGGT+GGG - chr1_3:44728127-44728146 Msa0120080:intron 35.0%
GGGATCTGGAAAGATATTTA+CGG - chr1_3:44728147-44728166 Msa0120080:intron 35.0%
GGATCTGGAAAGATATTTAC+GGG - chr1_3:44728148-44728167 Msa0120080:intron 35.0%
TGAAAAGAAGGTTGCTGATA+TGG - chr1_3:44728176-44728195 Msa0120080:intron 35.0%
CATAAATGGAATCTCACTTC+TGG + chr1_3:44728662-44728681 None:intergenic 35.0%
!! TGTCGTAATTGATTTTGCTC+AGG + chr1_3:44728849-44728868 None:intergenic 35.0%
ACTTATATTGCTTGACATGC+AGG - chr1_3:44728930-44728949 Msa0120080:intron 35.0%
ATTGGTTATCCCAATACTAC+AGG - chr1_3:44728961-44728980 Msa0120080:intron 35.0%
!! TTATAGAATCACCGATTCAC+TGG - chr1_3:44728999-44729018 Msa0120080:intron 35.0%
AAAGGAAGCAATCTGGTAAT+CGG + chr1_3:44729172-44729191 None:intergenic 35.0%
ATAAAACCATTGGAAAGAGC+AGG + chr1_3:44729236-44729255 None:intergenic 35.0%
!! TAGCTTTAACAATCTTGCCA+AGG - chr1_3:44729265-44729284 Msa0120080:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr1_3:44729448-44729467 Msa0120080:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr1_3:44729452-44729471 Msa0120080:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr1_3:44729552-44729571 Msa0120080:intron 35.0%
! GATTACTCCTACAGTATTGA+AGG - chr1_3:44729669-44729688 Msa0120080:intron 35.0%
! TCCTACAGTATTGAAGGTTT+GGG - chr1_3:44729675-44729694 Msa0120080:intron 35.0%
! ATGGTTTACATTTTACCACG+AGG + chr1_3:44729732-44729751 None:intergenic 35.0%
CTAACACTATCACAGCAAAA+TGG + chr1_3:44729751-44729770 None:intergenic 35.0%
ATCGTGGTTAAGAAGAATGA+GGG + chr1_3:44729836-44729855 None:intergenic 35.0%
AATAAGCTTGCATATGATCG+TGG + chr1_3:44729852-44729871 None:intergenic 35.0%
TATGCAAGCTTATTCTCTGA+TGG - chr1_3:44729858-44729877 Msa0120080:intron 35.0%
GCAGGACCATTAAAACATTA+AGG + chr1_3:44729911-44729930 None:intergenic 35.0%
AAAACAAAACGAATTCAGGC+AGG + chr1_3:44729929-44729948 None:intergenic 35.0%
GAGAAGAACAGATAAAACAG+AGG + chr1_3:44730003-44730022 None:intergenic 35.0%
!! CCTTTTTCATATCCTTGATG+CGG - chr1_3:44730034-44730053 Msa0120080:intron 35.0%
!! GATACACGTTATTTCTTGGT+TGG - chr1_3:44730530-44730549 Msa0120080:intron 35.0%
!! AAGTTTCATTGACTTTAGCC+AGG + chr1_3:44731066-44731085 None:intergenic 35.0%
!!! GACTGGCTTTTAAACTCTTT+TGG + chr1_3:44731194-44731213 None:intergenic 35.0%
GGGAAACTAAGGAAAACTAT+AGG + chr1_3:44731390-44731409 None:intergenic 35.0%
AGTGAAATAGAGGGAAACTA+AGG + chr1_3:44731401-44731420 None:intergenic 35.0%
!! TATATGTTGACTCTAGACCA+AGG + chr1_3:44731601-44731620 None:intergenic 35.0%
! TTGGTCTAGAGTCAACATAT+AGG - chr1_3:44731600-44731619 Msa0120080:intron 35.0%
AATTCCATGCGTTTCAAAGA+AGG + chr1_3:44731659-44731678 None:intergenic 35.0%
ATGGAATTGTTAGAACAGTC+TGG - chr1_3:44731671-44731690 Msa0120080:intron 35.0%
CCGTTAATATTAAGTTTCGG+TGG + chr1_3:44731791-44731810 None:intergenic 35.0%
! ATTAACGGATGCGAAGAAAA+TGG - chr1_3:44731803-44731822 Msa0120080:intron 35.0%
GTTGAAATTCAGTAGTAAGC+AGG - chr1_3:44731832-44731851 Msa0120080:intron 35.0%
GAAATACAGTAGTTGTAAGC+AGG - chr1_3:44731870-44731889 Msa0120080:intron 35.0%
!! AGGGTGTTGAACTGTATTAT+AGG - chr1_3:44731953-44731972 Msa0120080:intron 35.0%
GTGTTGAACTGTATTATAGG+TGG - chr1_3:44731956-44731975 Msa0120080:intron 35.0%
ATTGTGGTTACTAATGGAAG+AGG - chr1_3:44732000-44732019 Msa0120080:intron 35.0%
!!! TGCAAAGCTTACTTTTTGTG+AGG + chr1_3:44732042-44732061 None:intergenic 35.0%
TGGGAAAGAAATGTAAGCAA+TGG - chr1_3:44732079-44732098 Msa0120080:intron 35.0%
TGGACTATAATTCAGGGAAA+AGG + chr1_3:44732194-44732213 None:intergenic 35.0%
! AGTCCAAATATCGGTTATAG+CGG - chr1_3:44732208-44732227 Msa0120080:five_prime_UTR 35.0%
TCACTTTGTACTCTTGTTCA+TGG + chr1_3:44732234-44732253 None:intergenic 35.0%
AAACTCCAATGTTGTGAACT+TGG + chr1_3:44732384-44732403 None:intergenic 35.0%
TGGAATTGAATGGACGCAAA+GGG + chr1_3:44715953-44715972 None:intergenic 40.0%
TTGGAATTGAATGGACGCAA+AGG + chr1_3:44715954-44715973 None:intergenic 40.0%
GTAATCAACGAAACAGTCTC+AGG - chr1_3:44715978-44715997 Msa0120080:three_prime_UTR 40.0%
GGTGAAGATTAAAGGGAGAA+TGG + chr1_3:44716103-44716122 None:intergenic 40.0%
!! TGTTGGTGTTGTTGAAGTGT+AGG + chr1_3:44716138-44716157 None:intergenic 40.0%
!! AGGTTCTAGAAAGCTGTTGT+TGG + chr1_3:44716155-44716174 None:intergenic 40.0%
! TACCTTTTTCCGTACTTGCT+AGG - chr1_3:44716223-44716242 Msa0120080:three_prime_UTR 40.0%
!! ACCTTTTTCCGTACTTGCTA+GGG - chr1_3:44716224-44716243 Msa0120080:three_prime_UTR 40.0%
AAAGTGCAATGAATGCTCTC+AGG - chr1_3:44716310-44716329 Msa0120080:three_prime_UTR 40.0%
AAGTGCAATGAATGCTCTCA+GGG - chr1_3:44716311-44716330 Msa0120080:three_prime_UTR 40.0%
ATTAGTGTCCTTAGGGTTCT+TGG - chr1_3:44716446-44716465 Msa0120080:exon 40.0%
GATGTCATTATAGTCCCTTG+AGG + chr1_3:44716640-44716659 None:intergenic 40.0%
! GTAGGAAAGTGCGATTAAGA+TGG - chr1_3:44716771-44716790 Msa0120080:CDS 40.0%
AAAGTGCGATTAAGATGGCT+TGG - chr1_3:44716776-44716795 Msa0120080:CDS 40.0%
GCTTGGATGGAAGAAAATGA+TGG - chr1_3:44716793-44716812 Msa0120080:CDS 40.0%
GGAAAAGAAAAGGAGTTAGG+CGG - chr1_3:44716820-44716839 Msa0120080:CDS 40.0%
AAAGAACCATCTGTTAGTGC+TGG - chr1_3:44716865-44716884 Msa0120080:intron 40.0%
TGGTGGAGATGATACTGTTT+CGG - chr1_3:44716885-44716904 Msa0120080:intron 40.0%
! TGCTTTGTATGAGCGTGTTT+TGG - chr1_3:44716987-44717006 Msa0120080:intron 40.0%
! GCATATCCCTTTTCCAATGA+GGG + chr1_3:44717037-44717056 None:intergenic 40.0%
! AGCATATCCCTTTTCCAATG+AGG + chr1_3:44717038-44717057 None:intergenic 40.0%
ATGCTTGCAGATGCAGAATA+TGG - chr1_3:44717053-44717072 Msa0120080:intron 40.0%
TGCTTGCAGATGCAGAATAT+GGG - chr1_3:44717054-44717073 Msa0120080:intron 40.0%
TAAAGAAGAAGGTCGCTTGA+TGG - chr1_3:44717161-44717180 Msa0120080:intron 40.0%
! CACTGTATTAACCGACTTAG+TGG - chr1_3:44717341-44717360 Msa0120080:intron 40.0%
!! GCATTGACTCCCATAAATCA+TGG - chr1_3:44717727-44717746 Msa0120080:intron 40.0%
TCAAGAACCTGATACAGTCA+TGG - chr1_3:44717972-44717991 Msa0120080:intron 40.0%
ATCATGACCATGACTGTATC+AGG + chr1_3:44717982-44718001 None:intergenic 40.0%
! CGAGCAAAGAATTTTCTTCG+AGG - chr1_3:44718066-44718085 Msa0120080:intron 40.0%
GTTAAGAAAGAGTGGGTAAC+GGG + chr1_3:44718165-44718184 None:intergenic 40.0%
GGTTAAGAAAGAGTGGGTAA+CGG + chr1_3:44718166-44718185 None:intergenic 40.0%
! GTCTGTTGGTTAAGAAAGAG+TGG + chr1_3:44718173-44718192 None:intergenic 40.0%
TGGGAAAATGAAAGGTCTGT+TGG + chr1_3:44718187-44718206 None:intergenic 40.0%
GCTGCATATGGGAAAATGAA+AGG + chr1_3:44718195-44718214 None:intergenic 40.0%
GTCATGGTAGTTAAAAGTGG+GGG - chr1_3:44718412-44718431 Msa0120080:intron 40.0%
CAGGAAAATCTTGAGTGTGT+TGG - chr1_3:44718493-44718512 Msa0120080:CDS 40.0%
TCTATGTAAGCTCATGGGAT+TGG - chr1_3:44718529-44718548 Msa0120080:CDS 40.0%
!! GGTTTTTAAAAAGTGGTGCG+CGG + chr1_3:44718589-44718608 None:intergenic 40.0%
AAATGCAAGAAGACGTCTGT+GGG + chr1_3:44718691-44718710 None:intergenic 40.0%
AAAATGCAAGAAGACGTCTG+TGG + chr1_3:44718692-44718711 None:intergenic 40.0%
AAGTAAGCTGTAACGCAAGA+GGG + chr1_3:44718768-44718787 None:intergenic 40.0%
! TCTCTTGTTTCAGTGCTTGT+TGG - chr1_3:44718898-44718917 Msa0120080:intron 40.0%
! CTCTTGTTTCAGTGCTTGTT+GGG - chr1_3:44718899-44718918 Msa0120080:intron 40.0%
ACTTCGTAAATTGGCAATGG+TGG + chr1_3:44718993-44719012 None:intergenic 40.0%
CCTACTTCGTAAATTGGCAA+TGG + chr1_3:44718996-44719015 None:intergenic 40.0%
CCATTGCCAATTTACGAAGT+AGG - chr1_3:44718993-44719012 Msa0120080:intron 40.0%
TTGCCAATTTACGAAGTAGG+TGG - chr1_3:44718996-44719015 Msa0120080:intron 40.0%
CTTGTCTATGAAACTTGACG+GGG - chr1_3:44719165-44719184 Msa0120080:intron 40.0%
GGAGTATATGCAAGGATAGA+TGG - chr1_3:44719280-44719299 Msa0120080:CDS 40.0%
TTTGTAGAAGGGAAAACCTC+TGG - chr1_3:44719333-44719352 Msa0120080:CDS 40.0%
AATTCTGTGGCTGTCTTGAA+TGG - chr1_3:44719393-44719412 Msa0120080:intron 40.0%
GACACTCTTCTTGATCAAAG+GGG + chr1_3:44719528-44719547 None:intergenic 40.0%
CGACACTCTTCTTGATCAAA+GGG + chr1_3:44719529-44719548 None:intergenic 40.0%
TCGACACTCTTCTTGATCAA+AGG + chr1_3:44719530-44719549 None:intergenic 40.0%
!! TTTGATCAAGAAGAGTGTCG+AGG - chr1_3:44719529-44719548 Msa0120080:intron 40.0%
!! TTGATCAAGAAGAGTGTCGA+GGG - chr1_3:44719530-44719549 Msa0120080:intron 40.0%
!! CTAAGAAGTTGATGGTCAAC+GGG - chr1_3:44719563-44719582 Msa0120080:intron 40.0%
! GTTTTTCTGTTGCTGTGACA+AGG + chr1_3:44719646-44719665 None:intergenic 40.0%
CCACTAAGAATCCTGTTCTT+GGG - chr1_3:44719683-44719702 Msa0120080:intron 40.0%
TGTCATCAAGGCAAGAAACA+AGG - chr1_3:44719746-44719765 Msa0120080:intron 40.0%
ATCACCACTGAAAACAATGC+TGG - chr1_3:44719779-44719798 Msa0120080:intron 40.0%
! CTTTCCAGCATTGTTTTCAG+TGG + chr1_3:44719786-44719805 None:intergenic 40.0%
TTTGGGGAGAACAAACAAAG+AGG - chr1_3:44719970-44719989 Msa0120080:intron 40.0%
TTGGGGAGAACAAACAAAGA+GGG - chr1_3:44719971-44719990 Msa0120080:intron 40.0%
! AGCTTAAGACCCTCTTTTCA+TGG + chr1_3:44720076-44720095 None:intergenic 40.0%
! GGATTAGGCCCAATGAATTT+TGG + chr1_3:44720113-44720132 None:intergenic 40.0%
AATTCATTGGGCCTAATCCA+AGG - chr1_3:44720114-44720133 Msa0120080:CDS 40.0%
TCTAGCCCAATTCATGATTC+GGG - chr1_3:44720141-44720160 Msa0120080:CDS 40.0%
CAGTGAATTGGTGAACGAAA+TGG + chr1_3:44720206-44720225 None:intergenic 40.0%
AGTTCAACTTGGCAGTGAAT+TGG + chr1_3:44720218-44720237 None:intergenic 40.0%
AACTTGCCTCTATGGTGTTT+GGG - chr1_3:44720234-44720253 Msa0120080:intron 40.0%
ATCTTTCCCAAACACCATAG+AGG + chr1_3:44720243-44720262 None:intergenic 40.0%
! AGTGATTTGGCAACTACTAC+AGG - chr1_3:44720283-44720302 Msa0120080:intron 40.0%
! ACAGGAAAGTGCAGATTGAT+CGG - chr1_3:44720301-44720320 Msa0120080:intron 40.0%
ATATTGCAACCTTGAGGACA+AGG - chr1_3:44720440-44720459 Msa0120080:intron 40.0%
AGAAAACAACCTTGTCCTCA+AGG + chr1_3:44720452-44720471 None:intergenic 40.0%
!! TGAGGACAAGGTTGTTTTCT+AGG - chr1_3:44720452-44720471 Msa0120080:intron 40.0%
!! GAGGACAAGGTTGTTTTCTA+GGG - chr1_3:44720453-44720472 Msa0120080:intron 40.0%
!! AGGACAAGGTTGTTTTCTAG+GGG - chr1_3:44720454-44720473 Msa0120080:intron 40.0%
! TTTCTAGGGGGTGTATTGTT+AGG - chr1_3:44720467-44720486 Msa0120080:intron 40.0%
GGGAATATAGTGGCTCAAAA+AGG - chr1_3:44720598-44720617 Msa0120080:intron 40.0%
GTTCCTATTCCTAACCATCA+TGG - chr1_3:44720718-44720737 Msa0120080:intron 40.0%
AGACAAGTATAAGATCGGAG+GGG + chr1_3:44720756-44720775 None:intergenic 40.0%
! CAAGGCTTTGCGATTTTACT+TGG + chr1_3:44721053-44721072 None:intergenic 40.0%
CAAGTAAAATCGCAAAGCCT+TGG - chr1_3:44721051-44721070 Msa0120080:intron 40.0%
AAAATCGCAAAGCCTTGGTT+AGG - chr1_3:44721056-44721075 Msa0120080:intron 40.0%
AAATCGCAAAGCCTTGGTTA+GGG - chr1_3:44721057-44721076 Msa0120080:intron 40.0%
ACCTAATAATGCCCTAACCA+AGG + chr1_3:44721071-44721090 None:intergenic 40.0%
CAAGGACAAATGTGACACTA+AGG + chr1_3:44721116-44721135 None:intergenic 40.0%
! TTTGCGTTCTAGTTGTCAAG+AGG - chr1_3:44721238-44721257 Msa0120080:intron 40.0%
CTTGGAGCAGTCATATCAAA+AGG - chr1_3:44721402-44721421 Msa0120080:intron 40.0%
!! GTCATATCAAAAGGCGTTAC+GGG - chr1_3:44721411-44721430 Msa0120080:intron 40.0%
! GCCATTGTTCTAACGGATAT+CGG - chr1_3:44721469-44721488 Msa0120080:intron 40.0%
ACCGATATCCGTTAGAACAA+TGG + chr1_3:44721473-44721492 None:intergenic 40.0%
! GTTTCCTGCAAGCTTTATGT+TGG + chr1_3:44721497-44721516 None:intergenic 40.0%
TGCAGGAAAAGGATTGAGAT+AGG + chr1_3:44721582-44721601 None:intergenic 40.0%
ATGAAAAAGCTGCATCAGAG+AGG - chr1_3:44721763-44721782 Msa0120080:CDS 40.0%
TGCTGAAGCATATTGCAACA+TGG - chr1_3:44721794-44721813 Msa0120080:CDS 40.0%
GCTGAAGCATATTGCAACAT+GGG - chr1_3:44721795-44721814 Msa0120080:CDS 40.0%
!! CGGCTATTACTTGTTATGAG+AGG - chr1_3:44721850-44721869 Msa0120080:CDS 40.0%
TTTGGAAGAACAGGGTTGTT+TGG - chr1_3:44722263-44722282 Msa0120080:intron 40.0%
GAGGGCAGTTTAGTTATTGA+AGG - chr1_3:44722442-44722461 Msa0120080:intron 40.0%
CGAAACATGCACTTAATGAC+CGG - chr1_3:44722677-44722696 Msa0120080:intron 40.0%
!! GGCTATAGCTTTGACAGATT+TGG - chr1_3:44722789-44722808 Msa0120080:intron 40.0%
TAATAGTGCAATGTCCCTCT+AGG - chr1_3:44723049-44723068 Msa0120080:intron 40.0%
AATGCATCTCATTGCACATG+AGG + chr1_3:44723188-44723207 None:intergenic 40.0%
! TTTTCTTGCTAACGGAGATC+AGG - chr1_3:44723223-44723242 Msa0120080:intron 40.0%
TTTCTTGCTAACGGAGATCA+GGG - chr1_3:44723224-44723243 Msa0120080:intron 40.0%
! GCAATGTGGATTGAAATGGA+AGG + chr1_3:44723539-44723558 None:intergenic 40.0%
TAAAGCTGTAGAATGCTACC+AGG - chr1_3:44723612-44723631 Msa0120080:intron 40.0%
CTGACACAATTGTCATTACC+TGG + chr1_3:44723633-44723652 None:intergenic 40.0%
! TCAGTTGTTTCAACCCTTGA+TGG - chr1_3:44723649-44723668 Msa0120080:intron 40.0%
! CAGTTGTTTCAACCCTTGAT+GGG - chr1_3:44723650-44723669 Msa0120080:intron 40.0%
CAATCCAATGAACCCATCAA+GGG + chr1_3:44723665-44723684 None:intergenic 40.0%
! GCAGAAGCATACAATAACCT+AGG - chr1_3:44723937-44723956 Msa0120080:intron 40.0%
TTACTTATGCTAGGGAAGGA+TGG - chr1_3:44724147-44724166 Msa0120080:intron 40.0%
AGAAGTTTCTGTGCAGAGAA+TGG + chr1_3:44724243-44724262 None:intergenic 40.0%
TCTGCACAGAAACTTCTGTA+TGG - chr1_3:44724246-44724265 Msa0120080:intron 40.0%
GTTATGCAGGAGTTCTTTAC+AGG - chr1_3:44724402-44724421 Msa0120080:CDS 40.0%
CTAAACAACTCCACTGTATC+CGG + chr1_3:44724653-44724672 None:intergenic 40.0%
GTTGTTTAGAGAGACCGTAT+TGG - chr1_3:44724664-44724683 Msa0120080:intron 40.0%
! ATTTTTCTGCTCCGCTATAG+CGG - chr1_3:44724984-44725003 Msa0120080:CDS 40.0%
ACAGATGACCCAACTTAACA+CGG - chr1_3:44725091-44725110 Msa0120080:intron 40.0%
GTGTGTGAAAAGGAAAGTCT+AGG + chr1_3:44725200-44725219 None:intergenic 40.0%
TGTAGTTCATTGCAAGCAAG+CGG + chr1_3:44725674-44725693 None:intergenic 40.0%
GACATGTAGTATAACTTCCG+GGG - chr1_3:44725943-44725962 Msa0120080:intron 40.0%
TGCGGCGGATAAAAATACTA+TGG + chr1_3:44726310-44726329 None:intergenic 40.0%
TCACATAAAGCAAATTGCGG+CGG + chr1_3:44726325-44726344 None:intergenic 40.0%
TAACGTTTCCTTTCAGGGAT+TGG - chr1_3:44726383-44726402 Msa0120080:intron 40.0%
AACGTTTCCTTTCAGGGATT+GGG - chr1_3:44726384-44726403 Msa0120080:intron 40.0%
TATGAAGGATTTCACACGCA+TGG + chr1_3:44726615-44726634 None:intergenic 40.0%
CCAATTAACTGTCGGAAAAC+AGG + chr1_3:44727062-44727081 None:intergenic 40.0%
! CCTGTTTTCCGACAGTTAAT+TGG - chr1_3:44727059-44727078 Msa0120080:intron 40.0%
! CTCATGCATAACAGTTCTGA+TGG + chr1_3:44727455-44727474 None:intergenic 40.0%
CATCAGAACTGTTATGCATG+AGG - chr1_3:44727453-44727472 Msa0120080:intron 40.0%
!! GCTTGCTGAATTGGTTTGTT+GGG - chr1_3:44727566-44727585 Msa0120080:intron 40.0%
!! GTTGGTAATCTTGTTGCCAT+TGG - chr1_3:44727616-44727635 Msa0120080:intron 40.0%
GCCATGTATGAAGTTGTTAG+TGG - chr1_3:44727663-44727682 Msa0120080:intron 40.0%
CTATGGACATCCATTCAAAC+TGG - chr1_3:44727734-44727753 Msa0120080:intron 40.0%
CGTATGAGAACCAGTTTGAA+TGG + chr1_3:44727747-44727766 None:intergenic 40.0%
CTATGGCAAGATCTAGGAAA+CGG + chr1_3:44727893-44727912 None:intergenic 40.0%
TTCCTAGATCTTGCCATAGA+AGG - chr1_3:44727894-44727913 Msa0120080:intron 40.0%
GTGCTATAAAGCTCCTTCTA+TGG + chr1_3:44727910-44727929 None:intergenic 40.0%
! TAGAAGGAGCTTTATAGCAC+CGG - chr1_3:44727910-44727929 Msa0120080:intron 40.0%
! TTATAGCACCGGGTAGTTTA+TGG - chr1_3:44727921-44727940 Msa0120080:intron 40.0%
AGGCAGATGCAAAAACCATT+CGG - chr1_3:44728097-44728116 Msa0120080:intron 40.0%
GACTTTCTCTCTAAACCGAA+TGG + chr1_3:44728115-44728134 None:intergenic 40.0%
GAGAAAGTCATAAAGAAGGG+TGG - chr1_3:44728126-44728145 Msa0120080:intron 40.0%
TTACGGGACTGATGAAAAGA+AGG - chr1_3:44728164-44728183 Msa0120080:intron 40.0%
AAAAATACCTGAACTGGAGC+AGG + chr1_3:44728282-44728301 None:intergenic 40.0%
TGACAGTACTTAGTTTAGCC+TGG - chr1_3:44728564-44728583 Msa0120080:intron 40.0%
GAGTAGATTTAGCACTTGCA+TGG + chr1_3:44728759-44728778 None:intergenic 40.0%
GCAACTACATATCACATGCT+TGG + chr1_3:44728783-44728802 None:intergenic 40.0%
GTAGGCAATCCTGTAGTATT+GGG + chr1_3:44728973-44728992 None:intergenic 40.0%
TGTAGGCAATCCTGTAGTAT+TGG + chr1_3:44728974-44728993 None:intergenic 40.0%
! AACTACTTCTGCTTTGTTCC+AGG + chr1_3:44729033-44729052 None:intergenic 40.0%
TCTTCAACATGCCTGTATAC+AGG + chr1_3:44729143-44729162 None:intergenic 40.0%
ATACAGGCATGTTGAAGAGT+TGG - chr1_3:44729145-44729164 Msa0120080:intron 40.0%
GTGTAACAAAGGAAGCAATC+TGG + chr1_3:44729179-44729198 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_3:44729556-44729575 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr1_3:44729451-44729470 Msa0120080:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_3:44729556-44729575 Msa0120080:intron 40.0%
! CTCCTACAGTATTGAAGGTT+TGG - chr1_3:44729674-44729693 Msa0120080:intron 40.0%
TCTTTCAACCCTAGAACAGT+TGG - chr1_3:44729780-44729799 Msa0120080:intron 40.0%
CTTTCAACCCTAGAACAGTT+GGG - chr1_3:44729781-44729800 Msa0120080:intron 40.0%
TTCCAATCCCAACTGTTCTA+GGG + chr1_3:44729791-44729810 None:intergenic 40.0%
TCGTGGTTAAGAAGAATGAG+GGG + chr1_3:44729835-44729854 None:intergenic 40.0%
GATCGTGGTTAAGAAGAATG+AGG + chr1_3:44729837-44729856 None:intergenic 40.0%
! CTTATTCTCTGATGGACATC+AGG - chr1_3:44729866-44729885 Msa0120080:intron 40.0%
CCGCATCAAGGATATGAAAA+AGG + chr1_3:44730037-44730056 None:intergenic 40.0%
TTCATATCCTTGATGCGGAT+TGG - chr1_3:44730039-44730058 Msa0120080:intron 40.0%
!! GTTAGTCTTCTTAGCAACGT+TGG - chr1_3:44730909-44730928 Msa0120080:intron 40.0%
TCTTCTTAGCAACGTTGGTA+TGG - chr1_3:44730914-44730933 Msa0120080:intron 40.0%
! CATTTCAGGTCTGGAGAATT+TGG - chr1_3:44731442-44731461 Msa0120080:CDS 40.0%
AATGTCAGACGCTAACTTCA+TGG + chr1_3:44731501-44731520 None:intergenic 40.0%
ATGTGGCACAGATATTGCAA+AGG - chr1_3:44731626-44731645 Msa0120080:intron 40.0%
!! TGTTCCTTCTTTGAAACGCA+TGG - chr1_3:44731652-44731671 Msa0120080:intron 40.0%
! CTTTTGCAGTTTGTAGTGAG+TGG - chr1_3:44731926-44731945 Msa0120080:intron 40.0%
AGTTTGTAGTGAGTGGTTCA+AGG - chr1_3:44731933-44731952 Msa0120080:intron 40.0%
GTTTGTAGTGAGTGGTTCAA+GGG - chr1_3:44731934-44731953 Msa0120080:intron 40.0%
TTACTAATGGAAGAGGCTTG+CGG - chr1_3:44732007-44732026 Msa0120080:intron 40.0%
!!! GCTTACTTTTTGTGAGGCTA+TGG + chr1_3:44732036-44732055 None:intergenic 40.0%
AAACAGTCTCAGGTAGTGTG+TGG - chr1_3:44715988-44716007 Msa0120080:three_prime_UTR 45.0%
! GGAGAATGGAAGTTTTCCTC+CGG + chr1_3:44716089-44716108 None:intergenic 45.0%
AAGTGTAGGTGGAGAGAAGA+AGG + chr1_3:44716124-44716143 None:intergenic 45.0%
!! TGGTGTTGTTGAAGTGTAGG+TGG + chr1_3:44716135-44716154 None:intergenic 45.0%
ACCCTAGCAAGTACGGAAAA+AGG + chr1_3:44716228-44716247 None:intergenic 45.0%
GAAATCGCAAACACCCTCAA+GGG - chr1_3:44716623-44716642 Msa0120080:CDS 45.0%
!! TTTTGGCTGATGAATGCGTG+AGG + chr1_3:44716664-44716683 None:intergenic 45.0%
CACGCATTCATCAGCCAAAA+TGG - chr1_3:44716664-44716683 Msa0120080:CDS 45.0%
! TGCGATTAAGATGGCTTGGA+TGG - chr1_3:44716780-44716799 Msa0120080:CDS 45.0%
AAGGAGTTAGGCGGAGAAAA+TGG - chr1_3:44716829-44716848 Msa0120080:CDS 45.0%
GGTGGAGATGATACTGTTTC+GGG - chr1_3:44716886-44716905 Msa0120080:intron 45.0%
GTGGAGATGATACTGTTTCG+GGG - chr1_3:44716887-44716906 Msa0120080:intron 45.0%
!! GAGTGATGGTGGAAATGTAG+AGG - chr1_3:44717011-44717030 Msa0120080:intron 45.0%
TAGAGGCCCTCATTGGAAAA+GGG - chr1_3:44717028-44717047 Msa0120080:intron 45.0%
TGCAGATGCAGAATATGGGT+AGG - chr1_3:44717058-44717077 Msa0120080:intron 45.0%
TATCCAGGTGACAAGCAATC+AGG + chr1_3:44717911-44717930 None:intergenic 45.0%
ACTAAGGAACTGAATGGACG+TGG + chr1_3:44718036-44718055 None:intergenic 45.0%
TGCTCGCTACATAGGTACTA+AGG + chr1_3:44718052-44718071 None:intergenic 45.0%
ACTTCCATGCAGTTCTTGAC+TGG - chr1_3:44718263-44718282 Msa0120080:intron 45.0%
CTTCCATGCAGTTCTTGACT+GGG - chr1_3:44718264-44718283 Msa0120080:intron 45.0%
TTCCATGCAGTTCTTGACTG+GGG - chr1_3:44718265-44718284 Msa0120080:intron 45.0%
TGGTAGTTAAAAGTGGGGGT+TGG - chr1_3:44718416-44718435 Msa0120080:intron 45.0%
! TGTAAGCTCATGGGATTGGT+TGG - chr1_3:44718533-44718552 Msa0120080:CDS 45.0%
AGTAAGCTGTAACGCAAGAG+GGG + chr1_3:44718767-44718786 None:intergenic 45.0%
CAAGTAAGCTGTAACGCAAG+AGG + chr1_3:44718769-44718788 None:intergenic 45.0%
AATCTCTCCTGCAAGCTCAT+AGG - chr1_3:44718789-44718808 Msa0120080:intron 45.0%
!! ATAGGTTCTAGCTTCCTGCT+GGG - chr1_3:44718807-44718826 Msa0120080:intron 45.0%
GAAGAGCAAAACAGCAACCA+GGG + chr1_3:44718870-44718889 None:intergenic 45.0%
TGAAGAGCAAAACAGCAACC+AGG + chr1_3:44718871-44718890 None:intergenic 45.0%
GTGTTGTCAAATATCGGCCA+TGG - chr1_3:44718939-44718958 Msa0120080:intron 45.0%
GTGCCACCTACTTCGTAAAT+TGG + chr1_3:44719002-44719021 None:intergenic 45.0%
! AGCAGCGACTCTTTTGTAGA+AGG - chr1_3:44719321-44719340 Msa0120080:CDS 45.0%
! GCAGCGACTCTTTTGTAGAA+GGG - chr1_3:44719322-44719341 Msa0120080:CDS 45.0%
TTTCATCTTCTCTCCTCCAG+AGG + chr1_3:44719352-44719371 None:intergenic 45.0%
GCATTTCCTTAGGCTCAACA+AGG + chr1_3:44719446-44719465 None:intergenic 45.0%
GCATGCTTCAGCATTTCCTT+AGG + chr1_3:44719456-44719475 None:intergenic 45.0%
! GCGCTGAAAAGGCAGAATTT+TGG - chr1_3:44719474-44719493 Msa0120080:intron 45.0%
GTTCAGTCTCTGCTCTTTCT+TGG + chr1_3:44719506-44719525 None:intergenic 45.0%
CGATGATGAGTCGAACAAGT+TGG - chr1_3:44719596-44719615 Msa0120080:intron 45.0%
! TGATGAGTCGAACAAGTTGG+AGG - chr1_3:44719599-44719618 Msa0120080:intron 45.0%
GCCACTAAGAATCCTGTTCT+TGG - chr1_3:44719682-44719701 Msa0120080:intron 45.0%
CCCAAGAACAGGATTCTTAG+TGG + chr1_3:44719686-44719705 None:intergenic 45.0%
AAGAATCCTGTTCTTGGGCA+AGG - chr1_3:44719688-44719707 Msa0120080:intron 45.0%
AGTGATGTGGACCATTCCAT+TGG - chr1_3:44719717-44719736 Msa0120080:intron 45.0%
TCGAGACGGAAGTGAAAACT+TGG - chr1_3:44719868-44719887 Msa0120080:intron 45.0%
AAACCTCCAAGAACGGCTTT+GGG + chr1_3:44719952-44719971 None:intergenic 45.0%
AAAACCTCCAAGAACGGCTT+TGG + chr1_3:44719953-44719972 None:intergenic 45.0%
! AAAGCCGTTCTTGGAGGTTT+TGG - chr1_3:44719952-44719971 Msa0120080:intron 45.0%
! AAGCCGTTCTTGGAGGTTTT+GGG - chr1_3:44719953-44719972 Msa0120080:intron 45.0%
TGGGGAGAACAAACAAAGAG+GGG - chr1_3:44719972-44719991 Msa0120080:intron 45.0%
! TCTGATGGGTCCATGAAAAG+AGG - chr1_3:44720063-44720082 Msa0120080:CDS 45.0%
! CTGATGGGTCCATGAAAAGA+GGG - chr1_3:44720064-44720083 Msa0120080:CDS 45.0%
TGTCGCCCGAATCATGAATT+GGG + chr1_3:44720149-44720168 None:intergenic 45.0%
ATGTCGCCCGAATCATGAAT+TGG + chr1_3:44720150-44720169 None:intergenic 45.0%
CCATAGAGGCAAGTTCAACT+TGG + chr1_3:44720229-44720248 None:intergenic 45.0%
! CCAAGTTGAACTTGCCTCTA+TGG - chr1_3:44720226-44720245 Msa0120080:intron 45.0%
GAACTTGCCTCTATGGTGTT+TGG - chr1_3:44720233-44720252 Msa0120080:intron 45.0%
!! GTGAAGTTGATAAGCCAGCT+GGG + chr1_3:44720356-44720375 None:intergenic 45.0%
!! TGTGAAGTTGATAAGCCAGC+TGG + chr1_3:44720357-44720376 None:intergenic 45.0%
!! GGACAAGGTTGTTTTCTAGG+GGG - chr1_3:44720455-44720474 Msa0120080:intron 45.0%
ATAAGATCGGAGGGGAGATA+TGG + chr1_3:44720748-44720767 None:intergenic 45.0%
! GCCTTGGTTAGGGCATTATT+AGG - chr1_3:44721067-44721086 Msa0120080:intron 45.0%
CAAACTTTGTGGTACGGACA+AGG + chr1_3:44721134-44721153 None:intergenic 45.0%
! ACTATCATGGGAGTATGCGT+AGG + chr1_3:44721165-44721184 None:intergenic 45.0%
!! ATATCAAAAGGCGTTACGGG+TGG - chr1_3:44721414-44721433 Msa0120080:intron 45.0%
! TCAGCAGCTGCTTTGTATGT+AGG + chr1_3:44721442-44721461 None:intergenic 45.0%
GGTACCAACATAAAGCTTGC+AGG - chr1_3:44721490-44721509 Msa0120080:intron 45.0%
AAAGCTTGCAGGAAACACTC+AGG - chr1_3:44721501-44721520 Msa0120080:intron 45.0%
! GTTATAGTATGCTGGCTGCA+AGG + chr1_3:44721691-44721710 None:intergenic 45.0%
CAGCCAGCATACTATAACCT+TGG - chr1_3:44721693-44721712 Msa0120080:intron 45.0%
ACGCCAAGGTTATAGTATGC+TGG + chr1_3:44721699-44721718 None:intergenic 45.0%
AGCATACTATAACCTTGGCG+TGG - chr1_3:44721698-44721717 Msa0120080:intron 45.0%
TTTCAGAATAGACCACGCCA+AGG + chr1_3:44721713-44721732 None:intergenic 45.0%
AAATCGAGGGGATTTGGAAG+CGG - chr1_3:44721830-44721849 Msa0120080:CDS 45.0%
CCATTTCAATCCACATTGCG+CGG - chr1_3:44723540-44723559 Msa0120080:intron 45.0%
GCGGAAGCTTGTAACAATCT+AGG - chr1_3:44723559-44723578 Msa0120080:intron 45.0%
!! TCAACCCTTGATGGGTTCAT+TGG - chr1_3:44723658-44723677 Msa0120080:intron 45.0%
GCAATCCAATGAACCCATCA+AGG + chr1_3:44723666-44723685 None:intergenic 45.0%
GGACAGTGTATACAACACCA+AGG + chr1_3:44723772-44723791 None:intergenic 45.0%
CTAATTTCTCCAGGGCAAGA+TGG - chr1_3:44723864-44723883 Msa0120080:CDS 45.0%
AAAAGTTGCACCGGATACAG+TGG - chr1_3:44724640-44724659 Msa0120080:intron 45.0%
TACTCTGTTGTGCAAGCTGA+CGG - chr1_3:44724753-44724772 Msa0120080:CDS 45.0%
GAAGTGAAAAGCGGTCTAAG+CGG + chr1_3:44724928-44724947 None:intergenic 45.0%
CAGATGACCCAACTTAACAC+GGG - chr1_3:44725092-44725111 Msa0120080:intron 45.0%
TATATATGGAGAAAGGGGGG+AGG + chr1_3:44725266-44725285 None:intergenic 45.0%
TCTTCACCAGCTGCCTATTA+CGG - chr1_3:44726140-44726159 Msa0120080:intron 45.0%
ACGTTTCCTTTCAGGGATTG+GGG - chr1_3:44726385-44726404 Msa0120080:intron 45.0%
ATTGGGGTTTGCGATTTAGG+AGG - chr1_3:44726401-44726420 Msa0120080:intron 45.0%
! AAAAAAATCGGTTCCTGCCG+TGG + chr1_3:44726738-44726757 None:intergenic 45.0%
! CTCAGCGATTTGAGAGCTTT+TGG - chr1_3:44726896-44726915 Msa0120080:intron 45.0%
!! TGACACTTGGCTTGCTGAAT+TGG - chr1_3:44727557-44727576 Msa0120080:intron 45.0%
!! GGCTTGCTGAATTGGTTTGT+TGG - chr1_3:44727565-44727584 Msa0120080:intron 45.0%
CTCCTTCTATGGCAAGATCT+AGG + chr1_3:44727899-44727918 None:intergenic 45.0%
! AGAAGGAGCTTTATAGCACC+GGG - chr1_3:44727911-44727930 Msa0120080:intron 45.0%
CTGAGGAACCATAAACTACC+CGG + chr1_3:44727932-44727951 None:intergenic 45.0%
TCATAAAGAAGGGTGGGATC+TGG - chr1_3:44728133-44728152 Msa0120080:intron 45.0%
! ACTTCTGCTTTGTTCCAGGA+GGG + chr1_3:44729029-44729048 None:intergenic 45.0%
! TACTTCTGCTTTGTTCCAGG+AGG + chr1_3:44729030-44729049 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_3:44729555-44729574 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_3:44729555-44729574 Msa0120080:intron 45.0%
GCCCAAACCTTCAATACTGT+AGG + chr1_3:44729679-44729698 None:intergenic 45.0%
! CAGTATTGAAGGTTTGGGCA+AGG - chr1_3:44729680-44729699 Msa0120080:intron 45.0%
AATTCCAAATTCTCGCCTCG+TGG - chr1_3:44729714-44729733 Msa0120080:intron 45.0%
TTTACCACGAGGCGAGAATT+TGG + chr1_3:44729721-44729740 None:intergenic 45.0%
! GCTGTGATAGTGTTAGACAG+AGG - chr1_3:44729755-44729774 Msa0120080:intron 45.0%
AACCCTAGAACAGTTGGGAT+TGG - chr1_3:44729786-44729805 Msa0120080:intron 45.0%
GTTCCAATCCCAACTGTTCT+AGG + chr1_3:44729792-44729811 None:intergenic 45.0%
!! AGAGGTGCTGCGCATAATAA+CGG + chr1_3:44729985-44730004 None:intergenic 45.0%
!! TCCTTGATGCGGATTGGATA+TGG - chr1_3:44730045-44730064 Msa0120080:intron 45.0%
ACCATATCCAATCCGCATCA+AGG + chr1_3:44730049-44730068 None:intergenic 45.0%
!! ATGCGGATTGGATATGGTTG+TGG - chr1_3:44730051-44730070 Msa0120080:intron 45.0%
TGAACGATCTATGCCAGCAA+AGG + chr1_3:44730405-44730424 None:intergenic 45.0%
CTCGTCGTCAATCATGTTTG+AGG - chr1_3:44730684-44730703 Msa0120080:intron 45.0%
TTGGACACCTTTCCATATGC+TGG - chr1_3:44730804-44730823 Msa0120080:intron 45.0%
TGGACACCTTTCCATATGCT+GGG - chr1_3:44730805-44730824 Msa0120080:intron 45.0%
AGTTGTCCCAGCATATGGAA+AGG + chr1_3:44730814-44730833 None:intergenic 45.0%
TCAGTGCATGCACACAATGT+TGG - chr1_3:44730885-44730904 Msa0120080:intron 45.0%
! AACTGCTTTGGTGTGCTAGA+AGG + chr1_3:44731043-44731062 None:intergenic 45.0%
ACTTTAGCCAGGAACTGCTT+TGG + chr1_3:44731055-44731074 None:intergenic 45.0%
!! TTGGCCTTTTCTCGCTATGT+TGG - chr1_3:44731313-44731332 Msa0120080:CDS 45.0%
! TGGCCTTTTCTCGCTATGTT+GGG - chr1_3:44731314-44731333 Msa0120080:CDS 45.0%
! AGTTTGCTCCATCACAGACA+GGG + chr1_3:44731574-44731593 None:intergenic 45.0%
! AAGTTTGCTCCATCACAGAC+AGG + chr1_3:44731575-44731594 None:intergenic 45.0%
GATGGAGCAAACTTCATCCT+TGG - chr1_3:44731581-44731600 Msa0120080:intron 45.0%
!! TGTTGGCTCAGAGTTCTCAT+CGG + chr1_3:44731702-44731721 None:intergenic 45.0%
ATGAGAACTCTGAGCCAACA+AGG - chr1_3:44731702-44731721 Msa0120080:intron 45.0%
TGAGAACTCTGAGCCAACAA+GGG - chr1_3:44731703-44731722 Msa0120080:intron 45.0%
CTTACGTTTACGACCCTTGT+TGG + chr1_3:44731719-44731738 None:intergenic 45.0%
AAGGGTCGTAAACGTAAGTG+AGG - chr1_3:44731721-44731740 Msa0120080:intron 45.0%
AGGGTCGTAAACGTAAGTGA+GGG - chr1_3:44731722-44731741 Msa0120080:intron 45.0%
! CTGCGATGAGTTGAATCCAT+TGG + chr1_3:44731768-44731787 None:intergenic 45.0%
ATTCAGTAGTAAGCAGGGAG+TGG - chr1_3:44731838-44731857 Msa0120080:intron 45.0%
TACTAATGGAAGAGGCTTGC+GGG - chr1_3:44732008-44732027 Msa0120080:intron 45.0%
ATTTGTCTCCTCAACTGCTG+TGG - chr1_3:44732113-44732132 Msa0120080:intron 45.0%
GGACGTGTTACAGCTATCAA+AGG + chr1_3:44732173-44732192 None:intergenic 45.0%
TGGCCGCTATAACCGATATT+TGG + chr1_3:44732214-44732233 None:intergenic 45.0%
GTTGGCCAAGTTCACAACAT+TGG - chr1_3:44732376-44732395 Msa0120080:five_prime_UTR 45.0%
!!! GATTTTTTTTTTTTTTAAAT+TGG - chr1_3:44726749-44726768 Msa0120080:intron 5.0%
! AGTTTTCCTCCGGTGAAGAG+TGG + chr1_3:44716079-44716098 None:intergenic 50.0%
GGGTTTGGGAACTTACGAGA+AGG + chr1_3:44716175-44716194 None:intergenic 50.0%
TCACGCTACCAAGAACCCTA+AGG + chr1_3:44716457-44716476 None:intergenic 50.0%
CGAAATCGCAAACACCCTCA+AGG - chr1_3:44716622-44716641 Msa0120080:CDS 50.0%
! GAACCATCTGTTAGTGCTGG+TGG - chr1_3:44716868-44716887 Msa0120080:intron 50.0%
TCTCCACCAGCACTAACAGA+TGG + chr1_3:44716874-44716893 None:intergenic 50.0%
GTTCCTCGAACGCAGAATGT+TGG + chr1_3:44716950-44716969 None:intergenic 50.0%
!!! GAGCGTGTTTTGGAGAGTGA+TGG - chr1_3:44716997-44717016 Msa0120080:intron 50.0%
!!! CGTGTTTTGGAGAGTGATGG+TGG - chr1_3:44717000-44717019 Msa0120080:intron 50.0%
GGAAATGTAGAGGCCCTCAT+TGG - chr1_3:44717021-44717040 Msa0120080:intron 50.0%
GTAGAGGCCCTCATTGGAAA+AGG - chr1_3:44717027-44717046 Msa0120080:intron 50.0%
GCTTGTGCTCTCACACATTG+TGG - chr1_3:44717129-44717148 Msa0120080:intron 50.0%
AGAAGAAGGTCGCTTGATGG+AGG - chr1_3:44717164-44717183 Msa0120080:intron 50.0%
! ACAGCAGTGCTTTTGCCACA+TGG - chr1_3:44717293-44717312 Msa0120080:intron 50.0%
CAAGCAATCAGGCACCATGA+TGG + chr1_3:44717900-44717919 None:intergenic 50.0%
GGAACTGAATGGACGTGGAT+AGG + chr1_3:44718031-44718050 None:intergenic 50.0%
TTCCCCAGTCAAGAACTGCA+TGG + chr1_3:44718270-44718289 None:intergenic 50.0%
GAATCAGGATCGCTCAAGGA+TGG + chr1_3:44718472-44718491 None:intergenic 50.0%
CTGTGAATCAGGATCGCTCA+AGG + chr1_3:44718476-44718495 None:intergenic 50.0%
CTTGAGCGATCCTGATTCAC+AGG - chr1_3:44718474-44718493 Msa0120080:CDS 50.0%
GCTAGTGGAAGAAACGCATG+TGG + chr1_3:44718731-44718750 None:intergenic 50.0%
GCTAGAACCTATGAGCTTGC+AGG + chr1_3:44718799-44718818 None:intergenic 50.0%
!! CATAGGTTCTAGCTTCCTGC+TGG - chr1_3:44718806-44718825 Msa0120080:intron 50.0%
! GTTTCAGTGCTTGTTGGGCT+AGG - chr1_3:44718904-44718923 Msa0120080:intron 50.0%
TTTACGAAGTAGGTGGCACC+AGG - chr1_3:44719003-44719022 Msa0120080:intron 50.0%
TTACGAAGTAGGTGGCACCA+GGG - chr1_3:44719004-44719023 Msa0120080:intron 50.0%
!! GCACCAGGGTGTTTTATGGT+GGG - chr1_3:44719018-44719037 Msa0120080:intron 50.0%
ATGCCCACCATAAAACACCC+TGG + chr1_3:44719024-44719043 None:intergenic 50.0%
TTGATTGCGATGGGAGAGCA+CGG + chr1_3:44719092-44719111 None:intergenic 50.0%
GTAGAAGGGAAAACCTCTGG+AGG - chr1_3:44719336-44719355 Msa0120080:CDS 50.0%
GAAATCGCGAGCTTGAGCAA+TGG - chr1_3:44719368-44719387 Msa0120080:intron 50.0%
TGCTGAAGCATGCGCTGAAA+AGG - chr1_3:44719463-44719482 Msa0120080:intron 50.0%
!! CAAGAAGAGTGTCGAGGGAT+TGG - chr1_3:44719535-44719554 Msa0120080:intron 50.0%
GACAAGGTCTTCTCTCGAGA+AGG + chr1_3:44719630-44719649 None:intergenic 50.0%
! TGTGGACCATTCCATTGGCT+TGG - chr1_3:44719722-44719741 Msa0120080:intron 50.0%
!! GTGGACCATTCCATTGGCTT+GGG - chr1_3:44719723-44719742 Msa0120080:intron 50.0%
TGACACCCAAGCCAATGGAA+TGG + chr1_3:44719731-44719750 None:intergenic 50.0%
! CTTGATGACACCCAAGCCAA+TGG + chr1_3:44719736-44719755 None:intergenic 50.0%
!! CATTGGCTTGGGTGTCATCA+AGG - chr1_3:44719734-44719753 Msa0120080:intron 50.0%
CCGTCTCGATCTCGACAAAT+GGG + chr1_3:44719857-44719876 None:intergenic 50.0%
CCCATTTGTCGAGATCGAGA+CGG - chr1_3:44719854-44719873 Msa0120080:intron 50.0%
TCCGTCTCGATCTCGACAAA+TGG + chr1_3:44719858-44719877 None:intergenic 50.0%
CGGAAGTGAAAACTTGGAGC+TGG - chr1_3:44719874-44719893 Msa0120080:intron 50.0%
! AGCCGTTCTTGGAGGTTTTG+GGG - chr1_3:44719954-44719973 Msa0120080:intron 50.0%
CTCCCCAAAACCTCCAAGAA+CGG + chr1_3:44719959-44719978 None:intergenic 50.0%
GGCTAGATGTGCCTTGGATT+AGG + chr1_3:44720128-44720147 None:intergenic 50.0%
! GAATTGGGCTAGATGTGCCT+TGG + chr1_3:44720134-44720153 None:intergenic 50.0%
ATAAGCCAGCTGGGTGCAAA+GGG + chr1_3:44720347-44720366 None:intergenic 50.0%
TCAAAAAGGGAGACCCTAGG+AGG - chr1_3:44720612-44720631 Msa0120080:intron 50.0%
AAGAGTGATCCCTCCTCCTA+GGG + chr1_3:44720628-44720647 None:intergenic 50.0%
GGGCCATGATGGTTAGGAAT+AGG + chr1_3:44720724-44720743 None:intergenic 50.0%
TATGGAGGGCCATGATGGTT+AGG + chr1_3:44720730-44720749 None:intergenic 50.0%
CTTGCAGGAAACACTCAGGA+GGG - chr1_3:44721505-44721524 Msa0120080:intron 50.0%
GAACGCTTACAGCATACGTC+CGG + chr1_3:44722699-44722718 None:intergenic 50.0%
! CCGCGCAATGTGGATTGAAA+TGG + chr1_3:44723543-44723562 None:intergenic 50.0%
TTACAAGCTTCCGCGCAATG+TGG + chr1_3:44723553-44723572 None:intergenic 50.0%
GGAGTTCTTTACAGGGATGC+TGG - chr1_3:44724410-44724429 Msa0120080:CDS 50.0%
ACTCTGTTGTGCAAGCTGAC+GGG - chr1_3:44724754-44724773 Msa0120080:CDS 50.0%
CGCGTGTCAGAAGTGAAAAG+CGG + chr1_3:44724937-44724956 None:intergenic 50.0%
GCAAGCGGTTCTGCACATTA+AGG + chr1_3:44725659-44725678 None:intergenic 50.0%
ATCCTGTATCTGCATGGTGC+TGG - chr1_3:44725986-44726005 Msa0120080:intron 50.0%
!! TGTATCTGCATGGTGCTGGT+GGG - chr1_3:44725990-44726009 Msa0120080:intron 50.0%
CATAAGCCGTAATAGGCAGC+TGG + chr1_3:44726149-44726168 None:intergenic 50.0%
GGGATTGGGGTTTGCGATTT+AGG - chr1_3:44726398-44726417 Msa0120080:intron 50.0%
CCTATCACAAGAGGCCTTTC+AGG + chr1_3:44726466-44726485 None:intergenic 50.0%
CCTGAAAGGCCTCTTGTGAT+AGG - chr1_3:44726463-44726482 Msa0120080:CDS 50.0%
GTTTATCTGTACTCCACGGC+AGG - chr1_3:44726722-44726741 Msa0120080:intron 50.0%
CGGGTAGTTTATGGTTCCTC+AGG - chr1_3:44727930-44727949 Msa0120080:intron 50.0%
TGCTTGACATGCAGGTGACT+TGG - chr1_3:44728938-44728957 Msa0120080:intron 50.0%
! GACATGCAGGTGACTTGGAT+TGG - chr1_3:44728943-44728962 Msa0120080:intron 50.0%
! CAGGGGAAGGAGTGTAACAA+AGG + chr1_3:44729190-44729209 None:intergenic 50.0%
AGGAGTTGGACAAACAGGAC+CGG + chr1_3:44729216-44729235 None:intergenic 50.0%
AGAGCAGGAGTTGGACAAAC+AGG + chr1_3:44729221-44729240 None:intergenic 50.0%
CCATTGGAAAGAGCAGGAGT+TGG + chr1_3:44729230-44729249 None:intergenic 50.0%
CCAACTCCTGCTCTTTCCAA+TGG - chr1_3:44729227-44729246 Msa0120080:intron 50.0%
GGCAGAAGATCAACTCGTAG+TGG + chr1_3:44729814-44729833 None:intergenic 50.0%
!! GAGGTGCTGCGCATAATAAC+GGG + chr1_3:44729984-44730003 None:intergenic 50.0%
GCATCAGAAACAACCGACCT+TGG + chr1_3:44730296-44730315 None:intergenic 50.0%
GTCGTAGTTGTCCCAGCATA+TGG + chr1_3:44730819-44730838 None:intergenic 50.0%
GGGAGTTCCATGCGTTACAA+TGG - chr1_3:44730857-44730876 Msa0120080:intron 50.0%
GTTCCATGCGTTACAATGGC+TGG - chr1_3:44730861-44730880 Msa0120080:intron 50.0%
GAACCAGCCATTGTAACGCA+TGG + chr1_3:44730867-44730886 None:intergenic 50.0%
TAGCACACCAAAGCAGTTCC+TGG - chr1_3:44731045-44731064 Msa0120080:intron 50.0%
CGACCCAACATAGCGAGAAA+AGG + chr1_3:44731320-44731339 None:intergenic 50.0%
GTTTGCTCCATCACAGACAG+GGG + chr1_3:44731573-44731592 None:intergenic 50.0%
CATTGGCCATGACAGATCCA+GGG + chr1_3:44731751-44731770 None:intergenic 50.0%
AGTAGTAAGCAGGGAGTGGT+GGG - chr1_3:44731842-44731861 Msa0120080:intron 50.0%
CAGTAGTTGTAAGCAGGGAG+TGG - chr1_3:44731876-44731895 Msa0120080:intron 50.0%
TAGTTGTAAGCAGGGAGTGG+TGG - chr1_3:44731879-44731898 Msa0120080:intron 50.0%
AGTTGTAAGCAGGGAGTGGT+GGG - chr1_3:44731880-44731899 Msa0120080:intron 50.0%
TCAACTGCTGTGGATACGCA+GGG - chr1_3:44732123-44732142 Msa0120080:intron 50.0%
CTCTTCTTCCTCTCCGGTGA+CGG + chr1_3:44716030-44716049 None:intergenic 55.0%
GACACGCTCTTCTTCCTCTC+CGG + chr1_3:44716036-44716055 None:intergenic 55.0%
TTTCCTCCGGTGAAGAGTGG+CGG + chr1_3:44716076-44716095 None:intergenic 55.0%
TCGCCAACATTCTGCGTTCG+AGG - chr1_3:44716944-44716963 Msa0120080:intron 55.0%
AGAAGGTCGCTTGATGGAGG+CGG - chr1_3:44717167-44717186 Msa0120080:intron 55.0%
GTGCCTGATTGCTTGTCACC+TGG - chr1_3:44717905-44717924 Msa0120080:intron 55.0%
TGCAAGAAGACGTCTGTGGG+TGG + chr1_3:44718688-44718707 None:intergenic 55.0%
GAAGAAGAGCAACACCCAGC+AGG + chr1_3:44718824-44718843 None:intergenic 55.0%
AAGCTTCACCTGTTGCTCCC+TGG - chr1_3:44718850-44718869 Msa0120080:intron 55.0%
AACAGCAACCAGGGAGCAAC+AGG + chr1_3:44718861-44718880 None:intergenic 55.0%
TCCACCACTGCAATCTGCCA+TGG + chr1_3:44718959-44718978 None:intergenic 55.0%
!! GGTGGCACCAGGGTGTTTTA+TGG - chr1_3:44719014-44719033 Msa0120080:intron 55.0%
!! GGCACCAGGGTGTTTTATGG+TGG - chr1_3:44719017-44719036 Msa0120080:intron 55.0%
TCAACAAGGCTCTCCATGGG+AGG + chr1_3:44719432-44719451 None:intergenic 55.0%
GGCTCAACAAGGCTCTCCAT+GGG + chr1_3:44719435-44719454 None:intergenic 55.0%
AGGCTCAACAAGGCTCTCCA+TGG + chr1_3:44719436-44719455 None:intergenic 55.0%
!! GGAGAGCCTTGTTGAGCCTA+AGG - chr1_3:44719437-44719456 Msa0120080:intron 55.0%
CTTCTGCCTTGCCCAAGAAC+AGG + chr1_3:44719697-44719716 None:intergenic 55.0%
GGCAAGGCAGAAGAGTGATG+TGG - chr1_3:44719704-44719723 Msa0120080:intron 55.0%
!!! GGCTTTGGGTGGGACAGTTT+TGG + chr1_3:44719938-44719957 None:intergenic 55.0%
!! CTCCAAGAACGGCTTTGGGT+GGG + chr1_3:44719948-44719967 None:intergenic 55.0%
TAAGCCAGCTGGGTGCAAAG+GGG + chr1_3:44720346-44720365 None:intergenic 55.0%
GATAAGCCAGCTGGGTGCAA+AGG + chr1_3:44720348-44720367 None:intergenic 55.0%
GGCTCAAAAAGGGAGACCCT+AGG - chr1_3:44720609-44720628 Msa0120080:intron 55.0%
AAAAGGGAGACCCTAGGAGG+AGG - chr1_3:44720615-44720634 Msa0120080:intron 55.0%
AAAGGGAGACCCTAGGAGGA+GGG - chr1_3:44720616-44720635 Msa0120080:intron 55.0%
CAAGAGTGATCCCTCCTCCT+AGG + chr1_3:44720629-44720648 None:intergenic 55.0%
CTAGGAGGAGGGATCACTCT+TGG - chr1_3:44720627-44720646 Msa0120080:intron 55.0%
GGAGATATGGAGGGCCATGA+TGG + chr1_3:44720735-44720754 None:intergenic 55.0%
GATCGGAGGGGAGATATGGA+GGG + chr1_3:44720744-44720763 None:intergenic 55.0%
AGATCGGAGGGGAGATATGG+AGG + chr1_3:44720745-44720764 None:intergenic 55.0%
GCTTGCAGGAAACACTCAGG+AGG - chr1_3:44721504-44721523 Msa0120080:intron 55.0%
! ATGCTGGCTGCAAGGACAGA+TGG + chr1_3:44721683-44721702 None:intergenic 55.0%
CTGGAGGGTGACATTAACCG+TGG - chr1_3:44723270-44723289 Msa0120080:intron 55.0%
GGGTGACATTAACCGTGGTG+TGG - chr1_3:44723275-44723294 Msa0120080:intron 55.0%
GATCCCGACTCTCGAAATGC+TGG - chr1_3:44724479-44724498 Msa0120080:intron 55.0%
TGGCCAGCATTTCGAGAGTC+GGG + chr1_3:44724485-44724504 None:intergenic 55.0%
CTGGCCAGCATTTCGAGAGT+CGG + chr1_3:44724486-44724505 None:intergenic 55.0%
CAACCATAGTGCACCAGACC+TGG + chr1_3:44724505-44724524 None:intergenic 55.0%
GCAATGCAGTGGTGTGATGC+GGG + chr1_3:44724902-44724921 None:intergenic 55.0%
CGCAATGCAGTGGTGTGATG+CGG + chr1_3:44724903-44724922 None:intergenic 55.0%
CGCATCACACCACTGCATTG+CGG - chr1_3:44724901-44724920 Msa0120080:intron 55.0%
! ACTTCTGACACGCGCTGATG+CGG - chr1_3:44724943-44724962 Msa0120080:CDS 55.0%
!!! TCGGCCGCTTTTGACAACAG+AGG - chr1_3:44725012-44725031 Msa0120080:CDS 55.0%
TATGGAGAAAGGGGGGAGGA+AGG + chr1_3:44725262-44725281 None:intergenic 55.0%
CACCAGCACCATGCAGATAC+AGG + chr1_3:44725991-44726010 None:intergenic 55.0%
! CTGTATCTGCATGGTGCTGG+TGG - chr1_3:44725989-44726008 Msa0120080:intron 55.0%
!! GTATCTGCATGGTGCTGGTG+GGG - chr1_3:44725991-44726010 Msa0120080:intron 55.0%
CGCAAACCCCAATCCCTGAA+AGG + chr1_3:44726394-44726413 None:intergenic 55.0%
TCTGTGTCGTGCTAAGCCTG+AGG + chr1_3:44727949-44727968 None:intergenic 55.0%
ATGTCGACCTGCTCCAGTTC+AGG - chr1_3:44728272-44728291 Msa0120080:intron 55.0%
AGGAGGGTCTGCCAGTGAAT+CGG + chr1_3:44729013-44729032 None:intergenic 55.0%
TACACTCCTTCCCCTGAAGC+CGG - chr1_3:44729194-44729213 Msa0120080:intron 55.0%
! ACAAACAGGACCGGCTTCAG+GGG + chr1_3:44729207-44729226 None:intergenic 55.0%
! GACAAACAGGACCGGCTTCA+GGG + chr1_3:44729208-44729227 None:intergenic 55.0%
TCCAAGTCCCCTGTCTGTGA+TGG - chr1_3:44731563-44731582 Msa0120080:intron 55.0%
TCCATCACAGACAGGGGACT+TGG + chr1_3:44731567-44731586 None:intergenic 55.0%
CCATTGGCCATGACAGATCC+AGG + chr1_3:44731752-44731771 None:intergenic 55.0%
CCTGGATCTGTCATGGCCAA+TGG - chr1_3:44731749-44731768 Msa0120080:intron 55.0%
CAGTAGTAAGCAGGGAGTGG+TGG - chr1_3:44731841-44731860 Msa0120080:intron 55.0%
CTGCGTATCCACAGCAGTTG+AGG + chr1_3:44732124-44732143 None:intergenic 55.0%
CTCAACTGCTGTGGATACGC+AGG - chr1_3:44732122-44732141 Msa0120080:intron 55.0%
TGGACGCAAAGGGACAACGC+AGG + chr1_3:44715943-44715962 None:intergenic 60.0%
CATCCTCCAAACGCCGTCAC+CGG - chr1_3:44716014-44716033 Msa0120080:three_prime_UTR 60.0%
GAGCCTACGCCTCATGCAAC+CGG - chr1_3:44718656-44718675 Msa0120080:intron 60.0%
GGCTGAGGCAGAGAAGCTAG+TGG + chr1_3:44718746-44718765 None:intergenic 60.0%
CTGTAACGCAAGAGGGGCTG+AGG + chr1_3:44718761-44718780 None:intergenic 60.0%
TCGGCCATGGCAGATTGCAG+TGG - chr1_3:44718952-44718971 Msa0120080:intron 60.0%
GCCATGGCAGATTGCAGTGG+TGG - chr1_3:44718955-44718974 Msa0120080:intron 60.0%
! ATTGCGATGGGAGAGCACGG+CGG + chr1_3:44719089-44719108 None:intergenic 60.0%
AGCTGACAGTCCTCCTCCCA+TGG - chr1_3:44719416-44719435 Msa0120080:intron 60.0%
ACAAGGCTCTCCATGGGAGG+AGG + chr1_3:44719429-44719448 None:intergenic 60.0%
GTCCCACCCAAAGCCGTTCT+TGG - chr1_3:44719943-44719962 Msa0120080:intron 60.0%
!! CCTCCAAGAACGGCTTTGGG+TGG + chr1_3:44719949-44719968 None:intergenic 60.0%
CCACCCAAAGCCGTTCTTGG+AGG - chr1_3:44719946-44719965 Msa0120080:intron 60.0%
TGTACCCCTTTGCACCCAGC+TGG - chr1_3:44720339-44720358 Msa0120080:intron 60.0%
CAGCAGCATCCATCTTGCCC+TGG + chr1_3:44723876-44723895 None:intergenic 60.0%
CGACTCTCGAAATGCTGGCC+AGG - chr1_3:44724484-44724503 Msa0120080:intron 60.0%
CTCGAAATGCTGGCCAGGTC+TGG - chr1_3:44724489-44724508 Msa0120080:intron 60.0%
TGGCCAGGTCTGGTGCACTA+TGG - chr1_3:44724499-44724518 Msa0120080:intron 60.0%
GGTGTGATGCGGGTCAAACG+CGG + chr1_3:44724892-44724911 None:intergenic 60.0%
CTAAGCGGACCGCAATGCAG+TGG + chr1_3:44724913-44724932 None:intergenic 60.0%
! CTTCTGACACGCGCTGATGC+GGG - chr1_3:44724944-44724963 Msa0120080:CDS 60.0%
TTCTGCTCCGCTATAGCGGC+CGG - chr1_3:44724988-44725007 Msa0120080:CDS 60.0%
GTTGTCAAAAGCGGCCGAGC+CGG + chr1_3:44725010-44725029 None:intergenic 60.0%
GATTCACTGGCAGACCCTCC+TGG - chr1_3:44729012-44729031 Msa0120080:intron 60.0%
! GGACAAACAGGACCGGCTTC+AGG + chr1_3:44729209-44729228 None:intergenic 60.0%
AACGTAAGTGAGGGCAGCCC+TGG - chr1_3:44731731-44731750 Msa0120080:intron 60.0%
ACTGCTGTGGATACGCAGGG+AGG - chr1_3:44732126-44732145 Msa0120080:intron 60.0%
! TCTCCGGTGACGGCGTTTGG+AGG + chr1_3:44716020-44716039 None:intergenic 65.0%
TCCAAACGCCGTCACCGGAG+AGG - chr1_3:44716019-44716038 Msa0120080:three_prime_UTR 65.0%
! TCCTCTCCGGTGACGGCGTT+TGG + chr1_3:44716023-44716042 None:intergenic 65.0%
!! AAGAGTGGCGGTGGTGGTGG+TGG + chr1_3:44716064-44716083 None:intergenic 65.0%
! GTGAAGAGTGGCGGTGGTGG+TGG + chr1_3:44716067-44716086 None:intergenic 65.0%
CCACCACCGCCACTCTTCAC+CGG - chr1_3:44716067-44716086 Msa0120080:three_prime_UTR 65.0%
TCGCTTGATGGAGGCGGCTG+AGG - chr1_3:44717173-44717192 Msa0120080:intron 65.0%
! CTGCCGGTTGCATGAGGCGT+AGG + chr1_3:44718662-44718681 None:intergenic 65.0%
CTACGCCTCATGCAACCGGC+AGG - chr1_3:44718660-44718679 Msa0120080:intron 65.0%
! TGGTGCCTGCCGGTTGCATG+AGG + chr1_3:44718668-44718687 None:intergenic 65.0%
!! TCTGCATGGTGCTGGTGGGG+AGG - chr1_3:44725994-44726013 Msa0120080:intron 65.0%
!! CTGCATGGTGCTGGTGGGGA+GGG - chr1_3:44725995-44726014 Msa0120080:intron 65.0%
! ACAGGACCGGCTTCAGGGGA+AGG + chr1_3:44729203-44729222 None:intergenic 65.0%
GGGCAGCCCTGGATCTGTCA+TGG - chr1_3:44731742-44731761 Msa0120080:intron 65.0%
!! AGTGGCGGTGGTGGTGGTGG+TGG + chr1_3:44716061-44716080 None:intergenic 70.0%
CCGGTGAAGAGTGGCGGTGG+TGG + chr1_3:44716070-44716089 None:intergenic 70.0%
CCTCCGGTGAAGAGTGGCGG+TGG + chr1_3:44716073-44716092 None:intergenic 70.0%
CCACCGCCACTCTTCACCGG+AGG - chr1_3:44716070-44716089 Msa0120080:three_prime_UTR 70.0%
CGTCTGTGGGTGGTGCCTGC+CGG + chr1_3:44718678-44718697 None:intergenic 70.0%
GCTGATGCGGGCAGACGCAG+TGG - chr1_3:44724956-44724975 Msa0120080:CDS 70.0%
CTCCGCTATAGCGGCCGGCT+CGG - chr1_3:44724993-44725012 Msa0120080:CDS 70.0%
! GCTGGTGGGGAGGGTGTGTG+CGG - chr1_3:44726004-44726023 Msa0120080:intron 70.0%
GGCCGAGCCGGCCGCTATAG+CGG + chr1_3:44724998-44725017 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 44715881 44732444 44715881 ID=Msa0120080;Name=Msa0120080
chr1_3 mRNA 44715881 44732444 44715881 ID=Msa0120080-mRNA-1;Parent=Msa0120080;Name=Msa0120080-mRNA-1;_AED=0.05;_eAED=0.05;_QI=313|0.94|0.94|1|0.94|0.88|18|573|901
chr1_3 exon 44715881 44716875 44715881 ID=Msa0120080-mRNA-1:exon:13369;Parent=Msa0120080-mRNA-1
chr1_3 exon 44717395 44717522 44717395 ID=Msa0120080-mRNA-1:exon:13368;Parent=Msa0120080-mRNA-1
chr1_3 exon 44718438 44718655 44718438 ID=Msa0120080-mRNA-1:exon:13367;Parent=Msa0120080-mRNA-1
chr1_3 exon 44719105 44719174 44719105 ID=Msa0120080-mRNA-1:exon:13366;Parent=Msa0120080-mRNA-1
chr1_3 exon 44719279 44719373 44719279 ID=Msa0120080-mRNA-1:exon:13365;Parent=Msa0120080-mRNA-1
chr1_3 exon 44720032 44720226 44720032 ID=Msa0120080-mRNA-1:exon:13364;Parent=Msa0120080-mRNA-1
chr1_3 exon 44721728 44721926 44721728 ID=Msa0120080-mRNA-1:exon:13363;Parent=Msa0120080-mRNA-1
chr1_3 exon 44722592 44722656 44722592 ID=Msa0120080-mRNA-1:exon:13362;Parent=Msa0120080-mRNA-1
chr1_3 exon 44723820 44723914 44723820 ID=Msa0120080-mRNA-1:exon:13361;Parent=Msa0120080-mRNA-1
chr1_3 exon 44724367 44724448 44724367 ID=Msa0120080-mRNA-1:exon:13360;Parent=Msa0120080-mRNA-1
chr1_3 exon 44724532 44724600 44724532 ID=Msa0120080-mRNA-1:exon:13359;Parent=Msa0120080-mRNA-1
chr1_3 exon 44724692 44724811 44724692 ID=Msa0120080-mRNA-1:exon:13358;Parent=Msa0120080-mRNA-1
chr1_3 exon 44724933 44725061 44724933 ID=Msa0120080-mRNA-1:exon:13357;Parent=Msa0120080-mRNA-1
chr1_3 exon 44725506 44725581 44725506 ID=Msa0120080-mRNA-1:exon:13356;Parent=Msa0120080-mRNA-1
chr1_3 exon 44726454 44726629 44726454 ID=Msa0120080-mRNA-1:exon:13355;Parent=Msa0120080-mRNA-1
chr1_3 exon 44726752 44726913 44726752 ID=Msa0120080-mRNA-1:exon:13354;Parent=Msa0120080-mRNA-1
chr1_3 exon 44731131 44731550 44731131 ID=Msa0120080-mRNA-1:exon:13353;Parent=Msa0120080-mRNA-1
chr1_3 exon 44732147 44732444 44732147 ID=Msa0120080-mRNA-1:exon:13352;Parent=Msa0120080-mRNA-1
chr1_3 five_prime_UTR 44732147 44732444 44732147 ID=Msa0120080-mRNA-1:five_prime_utr;Parent=Msa0120080-mRNA-1
chr1_3 five_prime_UTR 44731536 44731550 44731536 ID=Msa0120080-mRNA-1:five_prime_utr;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44731131 44731535 44731131 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44726752 44726913 44726752 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44726454 44726629 44726454 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44725506 44725581 44725506 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44724933 44725061 44724933 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44724692 44724811 44724692 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44724532 44724600 44724532 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44724367 44724448 44724367 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44723820 44723914 44723820 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44722592 44722656 44722592 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44721728 44721926 44721728 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44720032 44720226 44720032 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44719279 44719373 44719279 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44719105 44719174 44719105 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44718438 44718655 44718438 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44717395 44717522 44717395 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 CDS 44716454 44716875 44716454 ID=Msa0120080-mRNA-1:cds;Parent=Msa0120080-mRNA-1
chr1_3 three_prime_UTR 44715881 44716453 44715881 ID=Msa0120080-mRNA-1:three_prime_utr;Parent=Msa0120080-mRNA-1
Gene Sequence

>Msa0120080

ATGGCTTGGATGGAAGAAAATGATGGGAATGGAAAAGAAAAGGAGTTAGGCGGAGAAAATGGTTTTTTGAAAGTGAAAGAACCATCTGTTAGTGCTGGTGGAGATGATACTGTTTCGGGGAATAAAAGATCTGAAGTCAAAGACGATATTTCTTTCGCCAACATTCTGCGTTCGAGGAACAAGTTTACAGACTCTCTTGCTTTGTATGAGCGTGTTTTGGAGAGTGATGGTGGAAATGTAGAGGCCCTCATTGGAAAAGGGATATGCTTGCAGATGCAGAATATGGGTAGGCTTGCTTTTGATAGTTTTTCAGAAGCTGTTAAGTTGGATTCTCAGAATGCTTGTGCTCTCACACATTGTGGTATTCTTTATAAAGAAGAAGGTCGCTTGATGGAGGCGGCTGAGTCATATCAAAAGGCGTTACGGGTGGATCCTACATACAAAGCAGCTGCTGAATGCTTAGCCATTGTTCTAACGGATATCGGTACCAACATAAAGCTTGCAGGAAACACTCAGGAGGGTATTCAAAAATATTTTGAAGCTCTCAAAATAGATCATCATTATGCGCCAGCATACTATAACCTTGGCGTGGTCTATTCTGAAATGATGCAATATGACATGGCCCTGACTTTCTATGAAAAAGCTGCATCAGAGAGGCCTATGTATGCTGAAGCATATTGCAACATGGGTGTCATTTATAAAAATCGAGGGGATTTGGAAGCGGCTATTACTTGTTATGAGAGGTGTTTAGCTGTTTCACCTAACTTCGAGATTGCCAAAAATAATATGGCTATAGCTTTGACAGATTTGGGAACAAAGGTTAAACTGGAGGGTGACATTAACCGTGGTGTGGCATTTTATAAGAAAGCTTTGTATTATAATTGGCATTATGCTGATGCTATGTATAATCTTGGGGTTGCTTATGGTGAGATGCTTAAGTTTGATATGGCTATTGTGTTCTATGAACTTGCCTTCCATTTCAATCCACATTGCGCGGAAGCTTGTAACAATCTAGGCGTTATATATAAAGATCGTGACAACCTTGATAAAGCTGTAGAATGCTACCAGCTTGCTTTGTCAATCAAACCGAACTTTTCACAGTCATTAAATAACCTTGGTGTTGTATACACTGTCCAAGGCAAGATGGATGCTGCTGCAAGTATGATTGAGAAAGCTATCGTTGCAAATCCGACATATGCAGAAGCATACAATAACCTAGGAGTTCTTTACAGGGATGCTGGTGATATTGCTCTTGCAATTAATGCTTATGAACAATGTCTCAAGATTGATCCCGACTCTCGAAATGCTGGCCAGAACCGCTTGCTTGCAATGAACTACATAGATGAAGGAAATGATGACAAACTTTTTGAAGCTCACAGGGATTGGGGTTTGCGATTTAGGAGGCTATATCAACAATTTACATCATGGGACAACTCAAAAGATCCTGAAAGGCCTCTTGTGATAGGATATGTATCTCCTGATTATTTTACACACTCTGTGTCATACTTCATTGAAGCTCCCCTTATCTATCATGACTACACCAAATATAAAGTGATTGTTTATTCAGCAGTTGTCAAGGCAGATGCAAAAACCATTCGGTTTAGAGAGAAAGTCATAAAGAAGGGTGGGATCTGGAAAGATATTTACGGGACTGATGAAAAGAAGGTTGCTGATATGGTTAGAGAAGATCAAGTTGATATTTTGGTAGAACTTACTGGTCATACTGCAAACAATAAGTTGGGAATGATGGCATGTCGACCTGCTCCAGTTCAGGTGACTTGGATTGGTTATCCCAATACTACAGGATTGCCTACAATTGATTATAGAATCACCGATTCACTGGCAGACCCTCCTGGAACAAAGCAGAAGCATGTTGAAGAGTTGGTCCGATTACCAGATTGCTTCCTTTGTTACACTCCTTCCCCTGAAGCCGGTCCTATTACTCCTACAGTATTGAAGGTTTGGGCAAGGATACTGTGTGCAATTCCAAATTCTCGCCTCGTGGTAAAATGTAAACCATTTTGCTGTGATAGTGTTAGACAGAGGTTTCTTTCAACCCTAGAACAGTTGGGATTGGAACCACTACGAGTTGATCTTCTGCCCCTCATTCTTCTTAACCACGATCATATGCAAGCTTATTCTCTGATGGACATCAGTTTGGACACCTTTCCATATGCTGGGACAACTACGACATGTGAATCTTTATACATGGGAGTTCCATGCGTTACAATGGCTGGTTCAGTGCATGCACACAATGTTGGTGTTAGTCTTCTTAGCAACGTTGGTCTGGAGAATTTGGTTGCCAAAAATGAAGATGAATATGTTAAATTGGCCATGAAGTTAGCGTCTGACATTCCAGCATTACAAAACTTGAGAATGAGTCTTCGAGAGCTCATGTCCAAGTCCCCTGTCTGTGATGGAGCAAACTTCATCCTTGGTCTAGAGTCAACATATAGGAATATGTGGCACAGATATTGCAAAGGAGATGTTCCTTCTTTGAAACGCATGGAATTGTTAGAACAGTCTGGTTCTGCCGATGAGAACTCTGAGCCAACAAGGGTCGTAAACGTAAGTGAGGGCAGCCCTGGATCTGTCATGGCCAATGGATTCAACTCATCGCAGCCACCGAAACTTAATATTAACGGATGCGAAGAAAATGGTGTGTCGTTGAAATTCAGTAGTAAGCAGGGAGTGGTGGGTCCTTGA
Protein sequence

>Msa0120080

MAWMEENDGNGKEKELGGENGFLKVKEPSVSAGGDDTVSGNKRSEVKDDISFANILRSRNKFTDSLALYERVLESDGGNVEALIGKGICLQMQNMGRLAFDSFSEAVKLDSQNACALTHCGILYKEEGRLMEAAESYQKALRVDPTYKAAAECLAIVLTDIGTNIKLAGNTQEGIQKYFEALKIDHHYAPAYYNLGVVYSEMMQYDMALTFYEKAASERPMYAEAYCNMGVIYKNRGDLEAAITCYERCLAVSPNFEIAKNNMAIALTDLGTKVKLEGDINRGVAFYKKALYYNWHYADAMYNLGVAYGEMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGDIALAINAYEQCLKIDPDSRNAGQNRLLAMNYIDEGNDDKLFEAHRDWGLRFRRLYQQFTSWDNSKDPERPLVIGYVSPDYFTHSVSYFIEAPLIYHDYTKYKVIVYSAVVKADAKTIRFREKVIKKGGIWKDIYGTDEKKVADMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPGTKQKHVEELVRLPDCFLCYTPSPEAGPITPTVLKVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLEPLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSVHAHNVGVSLLSNVGLENLVAKNEDEYVKLAMKLASDIPALQNLRMSLRELMSKSPVCDGANFILGLESTYRNMWHRYCKGDVPSLKRMELLEQSGSADENSEPTRVVNVSEGSPGSVMANGFNSSQPPKLNINGCEENGVSLKFSSKQGVVGP*