Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121570 | RDX69104.1 | 59.777 | 179 | 63 | 3 | 4 | 178 | 22 | 195 | 2.13e-67 | 215 |
| Msa0121570 | RDX69104.1 | 60.000 | 80 | 32 | 0 | 12 | 91 | 123 | 202 | 7.80e-23 | 101 |
| Msa0121570 | RDX69104.1 | 67.368 | 95 | 30 | 1 | 85 | 178 | 9 | 103 | 3.78e-36 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121570 | sp|Q9ZUZ3|SAU32_ARATH | 42.466 | 73 | 38 | 2 | 114 | 182 | 23 | 95 | 4.67e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121570 | A0A371ESY4 | 59.777 | 179 | 63 | 3 | 4 | 178 | 22 | 195 | 1.02e-67 | 215 |
| Msa0121570 | A0A371ESY4 | 60.000 | 80 | 32 | 0 | 12 | 91 | 123 | 202 | 3.73e-23 | 101 |
| Msa0121570 | A0A371ESY4 | 67.368 | 95 | 30 | 1 | 85 | 178 | 9 | 103 | 1.80e-36 | 135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0121570 | Msa0165890 | 0.864788 | 9.446714e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121570 | MtrunA17_Chr1g0180721 | 97.917 | 96 | 2 | 0 | 86 | 181 | 10 | 105 | 2.22e-66 | 198 |
| Msa0121570 | MtrunA17_Chr1g0180721 | 89.535 | 86 | 9 | 0 | 2 | 87 | 20 | 105 | 6.73e-54 | 166 |
| Msa0121570 | MtrunA17_Chr1g0180711 | 93.878 | 98 | 6 | 0 | 85 | 182 | 9 | 106 | 4.07e-64 | 192 |
| Msa0121570 | MtrunA17_Chr1g0180711 | 85.057 | 87 | 13 | 0 | 2 | 88 | 20 | 106 | 5.91e-51 | 159 |
| Msa0121570 | MtrunA17_Chr1g0180691 | 92.000 | 100 | 6 | 1 | 85 | 182 | 9 | 108 | 2.51e-61 | 185 |
| Msa0121570 | MtrunA17_Chr1g0180691 | 83.146 | 89 | 13 | 1 | 2 | 88 | 20 | 108 | 8.87e-49 | 154 |
| Msa0121570 | MtrunA17_Chr1g0180701 | 89.899 | 99 | 7 | 1 | 85 | 180 | 9 | 107 | 2.01e-59 | 181 |
| Msa0121570 | MtrunA17_Chr1g0180701 | 84.884 | 86 | 10 | 1 | 2 | 84 | 20 | 105 | 3.44e-48 | 152 |
| Msa0121570 | MtrunA17_Chr1g0180741 | 55.670 | 97 | 36 | 1 | 85 | 181 | 9 | 98 | 3.26e-32 | 111 |
| Msa0121570 | MtrunA17_Chr1g0180741 | 60.256 | 78 | 31 | 0 | 7 | 84 | 18 | 95 | 7.12e-28 | 100 |
| Msa0121570 | MtrunA17_Chr1g0180751 | 53.608 | 97 | 38 | 1 | 85 | 181 | 9 | 98 | 7.14e-31 | 108 |
| Msa0121570 | MtrunA17_Chr1g0180751 | 59.494 | 79 | 32 | 0 | 11 | 89 | 22 | 100 | 3.25e-27 | 99.0 |
| Msa0121570 | MtrunA17_Chr1g0180731 | 53.608 | 97 | 32 | 1 | 82 | 178 | 6 | 89 | 1.13e-28 | 102 |
| Msa0121570 | MtrunA17_Chr1g0180731 | 66.667 | 75 | 23 | 1 | 17 | 89 | 22 | 96 | 1.00e-27 | 100 |
| Msa0121570 | MtrunA17_Chr7g0264551 | 50.000 | 68 | 34 | 0 | 115 | 182 | 52 | 119 | 1.94e-21 | 84.7 |
| Msa0121570 | MtrunA17_Chr7g0264551 | 52.941 | 68 | 32 | 0 | 21 | 88 | 52 | 119 | 3.54e-21 | 84.0 |
| Msa0121570 | MtrunA17_Chr4g0028491 | 44.944 | 89 | 49 | 0 | 90 | 178 | 13 | 101 | 1.60e-19 | 79.7 |
| Msa0121570 | MtrunA17_Chr4g0028491 | 41.860 | 86 | 50 | 0 | 1 | 86 | 18 | 103 | 5.21e-18 | 75.9 |
| Msa0121570 | MtrunA17_Chr2g0327281 | 47.368 | 76 | 38 | 1 | 13 | 86 | 37 | 112 | 2.42e-17 | 74.3 |
| Msa0121570 | MtrunA17_Chr2g0327281 | 44.595 | 74 | 39 | 1 | 107 | 178 | 37 | 110 | 4.40e-16 | 70.9 |
| Msa0121570 | MtrunA17_Chr4g0028481 | 41.111 | 90 | 51 | 1 | 90 | 177 | 13 | 102 | 4.59e-16 | 71.2 |
| Msa0121570 | MtrunA17_Chr4g0028481 | 38.824 | 85 | 50 | 1 | 1 | 83 | 18 | 102 | 5.60e-14 | 65.5 |
| Msa0121570 | MtrunA17_Chr7g0264571 | 46.269 | 67 | 36 | 0 | 115 | 181 | 35 | 101 | 3.71e-15 | 68.2 |
| Msa0121570 | MtrunA17_Chr7g0264571 | 45.588 | 68 | 37 | 0 | 21 | 88 | 35 | 102 | 5.97e-15 | 67.4 |
| Msa0121570 | MtrunA17_Chr3g0127561 | 38.889 | 72 | 41 | 1 | 20 | 88 | 32 | 103 | 4.11e-13 | 62.8 |
| Msa0121570 | MtrunA17_Chr3g0127561 | 37.500 | 72 | 42 | 1 | 114 | 182 | 32 | 103 | 4.81e-13 | 62.8 |
| Msa0121570 | MtrunA17_Chr8g0346181 | 45.161 | 62 | 34 | 0 | 115 | 176 | 27 | 88 | 7.23e-13 | 62.0 |
| Msa0121570 | MtrunA17_Chr8g0346181 | 43.056 | 72 | 38 | 1 | 21 | 89 | 27 | 98 | 5.68e-12 | 59.7 |
| Msa0121570 | MtrunA17_Chr7g0276101 | 43.056 | 72 | 38 | 1 | 21 | 89 | 23 | 94 | 5.13e-12 | 59.7 |
| Msa0121570 | MtrunA17_Chr7g0276101 | 43.548 | 62 | 35 | 0 | 115 | 176 | 23 | 84 | 6.27e-12 | 59.3 |
| Msa0121570 | MtrunA17_Chr4g0000251 | 45.455 | 66 | 34 | 1 | 112 | 177 | 67 | 130 | 4.54e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0121570 | AT3G09870.1 | 41.975 | 81 | 47 | 0 | 101 | 181 | 31 | 111 | 6.01e-19 | 78.2 |
| Msa0121570 | AT3G09870.1 | 44.872 | 78 | 43 | 0 | 7 | 84 | 31 | 108 | 2.83e-18 | 76.6 |
| Msa0121570 | AT2G28085.1 | 48.101 | 79 | 39 | 1 | 10 | 86 | 44 | 122 | 2.89e-15 | 68.9 |
| Msa0121570 | AT2G28085.1 | 37.864 | 103 | 59 | 2 | 77 | 177 | 20 | 119 | 7.66e-15 | 67.8 |
| Msa0121570 | AT2G46690.1 | 42.466 | 73 | 38 | 2 | 114 | 182 | 23 | 95 | 4.75e-12 | 60.5 |
| Msa0121570 | AT4G00880.1 | 35.644 | 101 | 53 | 3 | 85 | 182 | 7 | 98 | 1.67e-11 | 59.3 |
Find 42 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCTCAATGCATGCTTTCT+TGG | 0.218584 | 1_3:-47522612 | None:intergenic |
| AGTGAAGATCATGCCACAAC+TGG | 0.365708 | 1_3:+47522639 | Msa0121570:CDS |
| AGTGAAGATCATGCCACAAC+TGG | 0.379520 | 1_3:+47516527 | Msa0121570:CDS |
| AAAATATTCTGTAATTCTAT+AGG | 0.381660 | 1_3:-47522840 | None:intergenic |
| GATGATGCTTGGGAGGAGTA+TGG | 0.392995 | 1_3:+47516668 | Msa0121570:CDS |
| GATGATGCTTGGGAGGAGTA+TGG | 0.392995 | 1_3:+47522780 | Msa0121570:CDS |
| CTTTGCTGTTCTTGCAAAGA+AGG | 0.394733 | 1_3:+47516577 | Msa0121570:CDS |
| CTTTGCTGTTCTTGCAAAGA+AGG | 0.394733 | 1_3:+47522689 | Msa0121570:CDS |
| TGGGATTGCTTGATGATGCT+TGG | 0.395014 | 1_3:+47516657 | Msa0121570:CDS |
| TGGGATTGCTTGATGATGCT+TGG | 0.395014 | 1_3:+47522769 | Msa0121570:CDS |
| GAAAGCATGCACTGAGCTAT+TGG | 0.397506 | 1_3:+47516504 | Msa0121570:intron |
| GAAAGCATGCATTGAGCTAC+TGG | 0.399615 | 1_3:+47522616 | Msa0121570:CDS |
| AAAATGTTCTGTAATTCTAT+AGG | 0.405493 | 1_3:-47516728 | None:intergenic |
| GGGATTGCTTGATGATGCTT+GGG | 0.409014 | 1_3:+47516658 | Msa0121570:CDS |
| GGGATTGCTTGATGATGCTT+GGG | 0.409014 | 1_3:+47522770 | Msa0121570:CDS |
| GAAACTAGAAGGTTTGTTGT+TGG | 0.425253 | 1_3:+47516605 | Msa0121570:CDS |
| GAAACTAGAAGGTTTATTGT+TGG | 0.428359 | 1_3:+47522717 | Msa0121570:CDS |
| AGAAGGGTGTAGAAACTAGA+AGG | 0.457872 | 1_3:+47516594 | Msa0121570:CDS |
| AGAAGGGTGTAGAAACTAGA+AGG | 0.457872 | 1_3:+47522706 | Msa0121570:CDS |
| CAGACAGAAGGGAACTCTTG+TGG | 0.534970 | 1_3:+47516694 | Msa0121570:CDS |
| CAGACAGAAGGGAACTCTTG+TGG | 0.534970 | 1_3:+47522806 | Msa0121570:CDS |
| GGAGTATGGTTTCAGACAGA+AGG | 0.547998 | 1_3:+47516682 | Msa0121570:CDS |
| GGAGTATGGTTTCAGACAGA+AGG | 0.547998 | 1_3:+47522794 | Msa0121570:CDS |
| TTTGCTGTTCTTGCAAAGAA+GGG | 0.553621 | 1_3:+47516578 | Msa0121570:CDS |
| TTTGCTGTTCTTGCAAAGAA+GGG | 0.553621 | 1_3:+47522690 | Msa0121570:CDS |
| TGTAATTCTATAGGCCTACA+TGG | 0.560080 | 1_3:-47516719 | None:intergenic |
| TGTAATTCTATAGGCCTACA+TGG | 0.560080 | 1_3:-47522831 | None:intergenic |
| GTCATCGGCAAGCCCAGTTG+TGG | 0.581203 | 1_3:-47522652 | None:intergenic |
| ATCATCGGCAAGCCCAGTTG+TGG | 0.585187 | 1_3:-47516540 | None:intergenic |
| TGGGCTTGCCGATGATGTCA+TGG | 0.590491 | 1_3:+47516547 | Msa0121570:CDS |
| GTAACCTTTCATGACGTCAT+CGG | 0.598550 | 1_3:-47522667 | None:intergenic |
| CTTGCCGATGACGTCATGAA+AGG | 0.598907 | 1_3:+47522663 | Msa0121570:CDS |
| GTAACCTTCCATGACATCAT+CGG | 0.601656 | 1_3:-47516555 | None:intergenic |
| GAACTCTTGTGGTTCCATGT+AGG | 0.605306 | 1_3:+47516705 | Msa0121570:CDS |
| GAACTCTTGTGGTTCCATGT+AGG | 0.605306 | 1_3:+47522817 | Msa0121570:CDS |
| ATTGCTTGATGATGCTTGGG+AGG | 0.606537 | 1_3:+47516661 | Msa0121570:CDS |
| ATTGCTTGATGATGCTTGGG+AGG | 0.606537 | 1_3:+47522773 | Msa0121570:CDS |
| GTGAAGATCATGCCACAACT+GGG | 0.613223 | 1_3:+47516528 | Msa0121570:CDS |
| GTGAAGATCATGCCACAACT+GGG | 0.613223 | 1_3:+47522640 | Msa0121570:CDS |
| GAGTATGGTTTCAGACAGAA+GGG | 0.622894 | 1_3:+47516683 | Msa0121570:CDS |
| GAGTATGGTTTCAGACAGAA+GGG | 0.622894 | 1_3:+47522795 | Msa0121570:CDS |
| CTTGCCGATGATGTCATGGA+AGG | 0.694081 | 1_3:+47516551 | Msa0121570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATGATATTAATGAATG+CGG | + | chr1_3:47516076-47516095 | Msa0121570:intron | 15.0% |
| !! | AAGAAAGATATAAATTAATG+AGG | - | chr1_3:47516934-47516953 | None:intergenic | 15.0% |
| !!! | TTATCCATTTTTTTTAATTG+AGG | - | chr1_3:47516971-47516990 | None:intergenic | 15.0% |
| !!! | TTTTTTAATGATTTTTGCAA+CGG | + | chr1_3:47517284-47517303 | Msa0121570:intron | 15.0% |
| !! | ATTAATTGTAAAATAGAGAA+TGG | + | chr1_3:47517340-47517359 | Msa0121570:intron | 15.0% |
| !!! | AGATTTATTCCAATTTTTTA+GGG | + | chr1_3:47517766-47517785 | Msa0121570:intron | 15.0% |
| !! | GATAAATACAAATATGAAAT+TGG | + | chr1_3:47520809-47520828 | Msa0121570:intron | 15.0% |
| !! | TTATTTAATCGTGAAATTTA+TGG | + | chr1_3:47521140-47521159 | Msa0121570:intron | 15.0% |
| !!! | GTACAACAATTTTTAAATTA+TGG | - | chr1_3:47521261-47521280 | None:intergenic | 15.0% |
| !! | AACATGCTTAAAAAAAATTA+AGG | + | chr1_3:47521338-47521357 | Msa0121570:intron | 15.0% |
| !! | TAAGATAATTCAATATATCT+AGG | + | chr1_3:47522258-47522277 | Msa0121570:intron | 15.0% |
| !! | AAGATAATTCAATATATCTA+GGG | + | chr1_3:47522259-47522278 | Msa0121570:intron | 15.0% |
| !! | AAAATATTCTGTAATTCTAT+AGG | - | chr1_3:47522843-47522862 | None:intergenic | 15.0% |
| !! | ATAATGATATTAATGAATGC+GGG | + | chr1_3:47516077-47516096 | Msa0121570:intron | 20.0% |
| !! | TTCAATTATTTCAATGTTGA+GGG | - | chr1_3:47516175-47516194 | None:intergenic | 20.0% |
| !! | ATTCAATTATTTCAATGTTG+AGG | - | chr1_3:47516176-47516195 | None:intergenic | 20.0% |
| !! | TCAACATTGAAATAATTGAA+TGG | + | chr1_3:47516175-47516194 | Msa0121570:intron | 20.0% |
| !! | ATCTGATTATTAAGAGATAT+AGG | - | chr1_3:47516372-47516391 | None:intergenic | 20.0% |
| !! | TACTTAAAGAACAATTAACA+AGG | - | chr1_3:47516399-47516418 | None:intergenic | 20.0% |
| !!! | TTAATTGATCCTACTTTTTT+GGG | + | chr1_3:47516638-47516657 | Msa0121570:CDS | 20.0% |
| !! | AAAATGTTCTGTAATTCTAT+AGG | - | chr1_3:47516731-47516750 | None:intergenic | 20.0% |
| !! | ATTTCTTTACAGAAATAAAG+AGG | - | chr1_3:47516822-47516841 | None:intergenic | 20.0% |
| !! | TAAATTAATGAGGATTTGAT+AGG | - | chr1_3:47516924-47516943 | None:intergenic | 20.0% |
| !! | TAGTCCTCAATTAAAAAAAA+TGG | + | chr1_3:47516964-47516983 | Msa0121570:intron | 20.0% |
| !! | GATGAAACTTAAAAATACAT+TGG | - | chr1_3:47517089-47517108 | None:intergenic | 20.0% |
| !!! | AAACTTGCTTAAAAAAATTG+AGG | + | chr1_3:47517183-47517202 | Msa0121570:intron | 20.0% |
| !!! | TTTCTGAAAATAAAATGAGA+GGG | - | chr1_3:47517416-47517435 | None:intergenic | 20.0% |
| !!! | TTTTCTGAAAATAAAATGAG+AGG | - | chr1_3:47517417-47517436 | None:intergenic | 20.0% |
| !!! | GAGATTTATTCCAATTTTTT+AGG | + | chr1_3:47517765-47517784 | Msa0121570:intron | 20.0% |
| !!! | TAAAAGTATCCCTAAAAAAT+TGG | - | chr1_3:47517778-47517797 | None:intergenic | 20.0% |
| !! | TTAGAAACAAACAACAAATT+AGG | + | chr1_3:47517870-47517889 | Msa0121570:intron | 20.0% |
| !! | TAGAAACAAACAACAAATTA+GGG | + | chr1_3:47517871-47517890 | Msa0121570:intron | 20.0% |
| !! | TTTACAAAAGAGATAACAAA+GGG | - | chr1_3:47518044-47518063 | None:intergenic | 20.0% |
| !!! | TAAAAGTATCCCTAAAAAAT+TGG | - | chr1_3:47517778-47517797 | None:intergenic | 20.0% |
| !! | TTTACAAAAGAGATAACAAA+GGG | - | chr1_3:47518044-47518063 | None:intergenic | 20.0% |
| !! | TGAAACTTAAAATGAAGAAT+TGG | - | chr1_3:47520643-47520662 | None:intergenic | 20.0% |
| !!! | ATTTTAAGTTTCAATTCAAC+TGG | + | chr1_3:47520650-47520669 | Msa0121570:intron | 20.0% |
| !! | AATACAAATATGAAATTGGT+AGG | + | chr1_3:47520813-47520832 | Msa0121570:intron | 20.0% |
| !! | AGAAAACTACTATAAAAGTT+AGG | + | chr1_3:47521033-47521052 | Msa0121570:intron | 20.0% |
| !! | TTATGATCAATATATGAAGA+AGG | + | chr1_3:47522075-47522094 | Msa0121570:intron | 20.0% |
| !! | GCAATATAATATTATGCTTA+GGG | - | chr1_3:47522466-47522485 | None:intergenic | 20.0% |
| !! | TGCAATATAATATTATGCTT+AGG | - | chr1_3:47522467-47522486 | None:intergenic | 20.0% |
| !! | TAGTTAGAGAACTATTAAAA+AGG | - | chr1_3:47522513-47522532 | None:intergenic | 20.0% |
| !!! | GAATTACAGAATATTTTAGA+TGG | + | chr1_3:47522846-47522865 | Msa0121570:CDS | 20.0% |
| ! | ATAATATCTTGTATAGAGTG+TGG | - | chr1_3:47516346-47516365 | None:intergenic | 25.0% |
| !!! | CTTAATTGATCCTACTTTTT+TGG | + | chr1_3:47516637-47516656 | Msa0121570:CDS | 25.0% |
| !! | GAATTACAGAACATTTTAGA+TGG | + | chr1_3:47516734-47516753 | Msa0121570:CDS | 25.0% |
| ! | AGACGTAAAAATGAAATTGT+TGG | + | chr1_3:47516865-47516884 | Msa0121570:intron | 25.0% |
| ! | GACGTAAAAATGAAATTGTT+GGG | + | chr1_3:47516866-47516885 | Msa0121570:intron | 25.0% |
| ! | AATTCAACATGAAAACTATG+AGG | + | chr1_3:47517510-47517529 | Msa0121570:intron | 25.0% |
| ! | ATTCAACATGAAAACTATGA+GGG | + | chr1_3:47517511-47517530 | Msa0121570:intron | 25.0% |
| !!! | GTTTTTATTTTATTTGCAGC+TGG | - | chr1_3:47517732-47517751 | None:intergenic | 25.0% |
| ! | CTTTACAAAAGAGATAACAA+AGG | - | chr1_3:47518045-47518064 | None:intergenic | 25.0% |
| !! | AAAGTTACTCATCATTTTAG+TGG | + | chr1_3:47518061-47518080 | Msa0121570:intron | 25.0% |
| !! | AGAAATTTGTTTACCCAATT+TGG | - | chr1_3:47518129-47518148 | None:intergenic | 25.0% |
| ! | CCAATAAAATACTTATTGTG+TGG | - | chr1_3:47518242-47518261 | None:intergenic | 25.0% |
| !! | CCACACAATAAGTATTTTAT+TGG | + | chr1_3:47518239-47518258 | Msa0121570:intron | 25.0% |
| ! | TTTAACGAATTCACAACAAT+TGG | + | chr1_3:47518270-47518289 | Msa0121570:intron | 25.0% |
| !! | TAATGAATTTGGGTTATGTA+AGG | + | chr1_3:47518372-47518391 | Msa0121570:intron | 25.0% |
| ! | TTTGTATATGACAAAGTCTT+TGG | + | chr1_3:47518600-47518619 | Msa0121570:intron | 25.0% |
| ! | TTCAAAGATATCATTCTCAA+TGG | + | chr1_3:47518805-47518824 | Msa0121570:intron | 25.0% |
| !!! | GTTTTTATTTTATTTGCTGC+TGG | - | chr1_3:47520014-47520033 | None:intergenic | 25.0% |
| ! | CTTTACAAAAGAGATAACAA+AGG | - | chr1_3:47518045-47518064 | None:intergenic | 25.0% |
| ! | AAAGTTACTCATCATTATAG+TGG | + | chr1_3:47520384-47520403 | Msa0121570:intron | 25.0% |
| ! | CCAATAAAATATTTGATGTG+TGG | - | chr1_3:47520566-47520585 | None:intergenic | 25.0% |
| !! | CCACACATCAAATATTTTAT+TGG | + | chr1_3:47520563-47520582 | Msa0121570:intron | 25.0% |
| ! | CTCAATCTAATTAGTTGAAT+TGG | - | chr1_3:47520721-47520740 | None:intergenic | 25.0% |
| ! | TTGTATTTATCTCTCTTAGA+TGG | - | chr1_3:47520800-47520819 | None:intergenic | 25.0% |
| !! | TTTCTCCATTCTTTTTGTAA+TGG | - | chr1_3:47520917-47520936 | None:intergenic | 25.0% |
| ! | TTTCTGACAAAAACCTTTAT+AGG | - | chr1_3:47521018-47521037 | None:intergenic | 25.0% |
| ! | GAAATTTATGGATTCAATAG+TGG | + | chr1_3:47521152-47521171 | Msa0121570:intron | 25.0% |
| ! | GATGAAACATCAAAATAGAT+TGG | - | chr1_3:47521239-47521258 | None:intergenic | 25.0% |
| ! | TTGTCTTTAGATTCAACAAT+GGG | - | chr1_3:47521541-47521560 | None:intergenic | 25.0% |
| ! | TTTGTCTTTAGATTCAACAA+TGG | - | chr1_3:47521542-47521561 | None:intergenic | 25.0% |
| ! | GAAGTCAAAGAAAACTAATA+TGG | + | chr1_3:47521704-47521723 | Msa0121570:intron | 25.0% |
| !!! | CTAGGGTTAAATATGTTTTT+TGG | - | chr1_3:47521752-47521771 | None:intergenic | 25.0% |
| ! | ACTTTAACAAACATCTTTGT+TGG | + | chr1_3:47521962-47521981 | Msa0121570:intron | 25.0% |
| !!! | CTTTGTTGGTTTGTATTAAT+TGG | + | chr1_3:47521976-47521995 | Msa0121570:intron | 25.0% |
| ! | GATGATATGTTATCTTTGTT+TGG | - | chr1_3:47522232-47522251 | None:intergenic | 25.0% |
| ! | GTAATTGACCTATCATATAA+TGG | + | chr1_3:47522338-47522357 | Msa0121570:intron | 25.0% |
| ! | CATTTATGCCATTATATGAT+AGG | - | chr1_3:47522349-47522368 | None:intergenic | 25.0% |
| ! | CTTAATATACGGTATTGTAT+TGG | - | chr1_3:47522402-47522421 | None:intergenic | 25.0% |
| ! | ATACGTAGCTACTTAATATA+CGG | - | chr1_3:47522413-47522432 | None:intergenic | 25.0% |
| !!! | AAGATGCTTAGTTTTTTTGT+TGG | + | chr1_3:47522558-47522577 | Msa0121570:intron | 25.0% |
| !!! | TACAGAATATTTTAGATGGT+CGG | + | chr1_3:47522850-47522869 | Msa0121570:CDS | 25.0% |
| ! | ATGGAGTAGTGGAAAATAAA+TGG | - | chr1_3:47516146-47516165 | None:intergenic | 30.0% |
| GTTCTCAGTTAGCATATTAA+TGG | + | chr1_3:47516320-47516339 | Msa0121570:intron | 30.0% | |
| !! | AAGATGCTTAGTTCTTTTGT+TGG | + | chr1_3:47516447-47516466 | Msa0121570:intron | 30.0% |
| ! | TACAGAACATTTTAGATGGT+CGG | + | chr1_3:47516738-47516757 | Msa0121570:intron | 30.0% |
| AATATGGTCATTTCCTTCAA+CGG | - | chr1_3:47516786-47516805 | None:intergenic | 30.0% | |
| TGAGAAGAACAACTACTATA+AGG | + | chr1_3:47517032-47517051 | Msa0121570:intron | 30.0% | |
| AAACAAAAAAATGTGCGAGT+AGG | - | chr1_3:47517546-47517565 | None:intergenic | 30.0% | |
| TTGTAGAAGTGACTCAAAAA+TGG | + | chr1_3:47517579-47517598 | Msa0121570:intron | 30.0% | |
| TGTAGAAGTGACTCAAAAAT+GGG | + | chr1_3:47517580-47517599 | Msa0121570:intron | 30.0% | |
| AAGGTTTACTCTGATACAAA+AGG | - | chr1_3:47517814-47517833 | None:intergenic | 30.0% | |
| TTTAGAGAGATTTCTCTAAG+TGG | + | chr1_3:47517894-47517913 | Msa0121570:intron | 30.0% | |
| TTAGAGAGATTTCTCTAAGT+GGG | + | chr1_3:47517895-47517914 | Msa0121570:intron | 30.0% | |
| AAATCGATAATCAAGTACCA+TGG | + | chr1_3:47518315-47518334 | Msa0121570:intron | 30.0% | |
| AATCGATAATCAAGTACCAT+GGG | + | chr1_3:47518316-47518335 | Msa0121570:intron | 30.0% | |
| TGGGATATTGAGAAATTTAC+CGG | + | chr1_3:47518346-47518365 | Msa0121570:intron | 30.0% | |
| TTTACCGGAGATAATGAATT+TGG | + | chr1_3:47518361-47518380 | Msa0121570:intron | 30.0% | |
| TTACCGGAGATAATGAATTT+GGG | + | chr1_3:47518362-47518381 | Msa0121570:intron | 30.0% | |
| TAACCCAAATTCATTATCTC+CGG | - | chr1_3:47518368-47518387 | None:intergenic | 30.0% | |
| TGCTTTAACTGTAACAAGAT+GGG | + | chr1_3:47519000-47519019 | Msa0121570:intron | 30.0% | |
| !! | ATACTTGTTATCTACCTTTG+AGG | + | chr1_3:47519265-47519284 | Msa0121570:intron | 30.0% |
| GTAAAAAAAAACTCAGCTTG+AGG | + | chr1_3:47519339-47519358 | Msa0121570:intron | 30.0% | |
| GAATTCTTCATGAAGATGTA+AGG | + | chr1_3:47519432-47519451 | Msa0121570:intron | 30.0% | |
| AGTTTGAAGAATGTATAGCA+TGG | + | chr1_3:47519463-47519482 | Msa0121570:intron | 30.0% | |
| ATGGTGACTTATGGTTAAAT+TGG | + | chr1_3:47519824-47519843 | Msa0121570:intron | 30.0% | |
| ! | TCATCACTAATTTAGAGTCA+AGG | + | chr1_3:47519849-47519868 | Msa0121570:intron | 30.0% |
| TTGTAGAAGTGACTCAAAAT+TGG | + | chr1_3:47519881-47519900 | Msa0121570:intron | 30.0% | |
| TGTAGAAGTGACTCAAAATT+GGG | + | chr1_3:47519882-47519901 | Msa0121570:intron | 30.0% | |
| ! | CTTTTCCTTAAGGCAAAAAT+CGG | + | chr1_3:47519954-47519973 | Msa0121570:intron | 30.0% |
| TTGGAAACAAACAACAAACT+AGG | + | chr1_3:47520193-47520212 | Msa0121570:intron | 30.0% | |
| TGGAAACAAACAACAAACTA+GGG | + | chr1_3:47520194-47520213 | Msa0121570:intron | 30.0% | |
| ! | TTTAGAGAGTTTTCTCTAAG+TGG | + | chr1_3:47520217-47520236 | Msa0121570:intron | 30.0% |
| ! | TTAGAGAGTTTTCTCTAAGT+GGG | + | chr1_3:47520218-47520237 | Msa0121570:intron | 30.0% |
| ! | CGAAATTTGTTTACACAGTT+CGG | - | chr1_3:47520452-47520471 | None:intergenic | 30.0% |
| ATGAAGAATTGGAACGATTT+GGG | - | chr1_3:47520632-47520651 | None:intergenic | 30.0% | |
| AATGAAGAATTGGAACGATT+TGG | - | chr1_3:47520633-47520652 | None:intergenic | 30.0% | |
| AACAACAATGACTCCTATAA+AGG | + | chr1_3:47521002-47521021 | Msa0121570:intron | 30.0% | |
| TTGGCTAAGAAACATATCTA+TGG | - | chr1_3:47521220-47521239 | None:intergenic | 30.0% | |
| TGTCTTTAGATTCAACAATG+GGG | - | chr1_3:47521540-47521559 | None:intergenic | 30.0% | |
| TAAAAAGCAGAGAGTAAAAG+TGG | + | chr1_3:47521657-47521676 | Msa0121570:intron | 30.0% | |
| ! | GAGACTTTTTGTTGATACAT+TGG | - | chr1_3:47521902-47521921 | None:intergenic | 30.0% |
| AATTGGTCAAGCAAATGTAT+AGG | + | chr1_3:47521993-47522012 | Msa0121570:intron | 30.0% | |
| ! | GAAATTAGTCTCTGCAATTA+TGG | + | chr1_3:47522155-47522174 | Msa0121570:intron | 30.0% |
| !! | TTTTGAGAGAACTGCAATTA+TGG | + | chr1_3:47522187-47522206 | Msa0121570:intron | 30.0% |
| ! | AAAGCTCTTATTTGAAAGGA+GGG | - | chr1_3:47522300-47522319 | None:intergenic | 30.0% |
| ! | AAAAGCTCTTATTTGAAAGG+AGG | - | chr1_3:47522301-47522320 | None:intergenic | 30.0% |
| ! | CCAAAAAGCTCTTATTTGAA+AGG | - | chr1_3:47522304-47522323 | None:intergenic | 30.0% |
| ! | CCTTTCAAATAAGAGCTTTT+TGG | + | chr1_3:47522301-47522320 | Msa0121570:intron | 30.0% |
| ! | ATATACGGTATTGTATTGGT+GGG | - | chr1_3:47522398-47522417 | None:intergenic | 30.0% |
| AATATACGGTATTGTATTGG+TGG | - | chr1_3:47522399-47522418 | None:intergenic | 30.0% | |
| ATAATATTATGCTTAGGGTG+TGG | - | chr1_3:47522461-47522480 | None:intergenic | 30.0% | |
| CTAAGCATCTTGAATATTGA+AGG | - | chr1_3:47522549-47522568 | None:intergenic | 30.0% | |
| GAAACTAGAAGGTTTATTGT+TGG | + | chr1_3:47522717-47522736 | Msa0121570:CDS | 30.0% | |
| !!! | TTAACTGATCCTGCTTTTTT+GGG | + | chr1_3:47522750-47522769 | Msa0121570:CDS | 30.0% |
| ATAAATGGCTTAGATCTCAC+CGG | - | chr1_3:47516131-47516150 | None:intergenic | 35.0% | |
| ! | TTATTTTCCACTACTCCATG+TGG | + | chr1_3:47516147-47516166 | Msa0121570:intron | 35.0% |
| ! | TATTTTCCACTACTCCATGT+GGG | + | chr1_3:47516148-47516167 | Msa0121570:intron | 35.0% |
| CTCTCCATTGAAAATTTCAC+TGG | + | chr1_3:47516217-47516236 | Msa0121570:intron | 35.0% | |
| TCCATTGAAAATTTCACTGG+AGG | + | chr1_3:47516220-47516239 | Msa0121570:intron | 35.0% | |
| CCATTGAAAATTTCACTGGA+GGG | + | chr1_3:47516221-47516240 | Msa0121570:intron | 35.0% | |
| CATTGAAAATTTCACTGGAG+GGG | + | chr1_3:47516222-47516241 | Msa0121570:intron | 35.0% | |
| TAGACACACCAATACAATAC+CGG | + | chr1_3:47516276-47516295 | Msa0121570:intron | 35.0% | |
| CATAATGTCCGGTATTGTAT+TGG | - | chr1_3:47516287-47516306 | None:intergenic | 35.0% | |
| !! | TTTGCTGTTCTTGCAAAGAA+GGG | + | chr1_3:47516578-47516597 | Msa0121570:CDS | 35.0% |
| !! | GAAACTAGAAGGTTTGTTGT+TGG | + | chr1_3:47516605-47516624 | Msa0121570:CDS | 35.0% |
| TCAAGCAATCCCAAAAAAGT+AGG | - | chr1_3:47516650-47516669 | None:intergenic | 35.0% | |
| TGTAATTCTATAGGCCTACA+TGG | - | chr1_3:47516722-47516741 | None:intergenic | 35.0% | |
| TGAAGGAAATGACCATATTC+CGG | + | chr1_3:47516787-47516806 | Msa0121570:intron | 35.0% | |
| AATAAAGAGGATCTTGACTC+CGG | - | chr1_3:47516809-47516828 | None:intergenic | 35.0% | |
| TTACGTCTATCTCTCGTTAA+TGG | - | chr1_3:47516853-47516872 | None:intergenic | 35.0% | |
| GAACAACTACTATAAGGTCT+AGG | + | chr1_3:47517038-47517057 | Msa0121570:intron | 35.0% | |
| TAGATGCACTCACATCTTAT+TGG | - | chr1_3:47517133-47517152 | None:intergenic | 35.0% | |
| AGCGCTTCTTCCAAAAATAT+TGG | + | chr1_3:47517388-47517407 | Msa0121570:intron | 35.0% | |
| CGATTTGTGAGAAGTGATTT+GGG | - | chr1_3:47517486-47517505 | None:intergenic | 35.0% | |
| ACGATTTGTGAGAAGTGATT+TGG | - | chr1_3:47517487-47517506 | None:intergenic | 35.0% | |
| GAGTCACTTCTACAACATAA+TGG | - | chr1_3:47517574-47517593 | None:intergenic | 35.0% | |
| GTAGAAGTGACTCAAAAATG+GGG | + | chr1_3:47517581-47517600 | Msa0121570:intron | 35.0% | |
| !! | TTTCTGAAACTGCCAAAATC+AGG | + | chr1_3:47517604-47517623 | Msa0121570:intron | 35.0% |
| !! | TTCTGAAACTGCCAAAATCA+GGG | + | chr1_3:47517605-47517624 | Msa0121570:intron | 35.0% |
| ! | GTAAAATCAGTGGCCTATTT+TGG | + | chr1_3:47517637-47517656 | Msa0121570:intron | 35.0% |
| GCTGAAAACACAACCAAAAT+AGG | - | chr1_3:47517653-47517672 | None:intergenic | 35.0% | |
| TATTTGCAGCTGGCAAAATT+AGG | - | chr1_3:47517722-47517741 | None:intergenic | 35.0% | |
| AAGGTGAATCAAAACAATCC+CGG | - | chr1_3:47517932-47517951 | None:intergenic | 35.0% | |
| ACCTTGAACAAAACACTGTT+AGG | + | chr1_3:47517947-47517966 | Msa0121570:intron | 35.0% | |
| !! | TCCTAACAGTGTTTTGTTCA+AGG | - | chr1_3:47517951-47517970 | None:intergenic | 35.0% |
| ! | ATAACTGCACCCACTTATTT+TGG | + | chr1_3:47518198-47518217 | Msa0121570:intron | 35.0% |
| GTCAAGCAACCAAAATAAGT+GGG | - | chr1_3:47518210-47518229 | None:intergenic | 35.0% | |
| AGTCAAGCAACCAAAATAAG+TGG | - | chr1_3:47518211-47518230 | None:intergenic | 35.0% | |
| TGGGTTATGTAAGGTAAAGA+TGG | + | chr1_3:47518381-47518400 | Msa0121570:intron | 35.0% | |
| ATGTAAGGTAAAGATGGAAG+TGG | + | chr1_3:47518387-47518406 | Msa0121570:intron | 35.0% | |
| ! | AAAGTGTGAGAAAGCTTTGA+TGG | + | chr1_3:47518423-47518442 | Msa0121570:intron | 35.0% |
| ! | AAGTGTGAGAAAGCTTTGAT+GGG | + | chr1_3:47518424-47518443 | Msa0121570:intron | 35.0% |
| !! | ATGAGTAGAGTTGTTGCTTT+AGG | - | chr1_3:47518639-47518658 | None:intergenic | 35.0% |
| ACAACTCTACTCATTCAAGA+TGG | + | chr1_3:47518645-47518664 | Msa0121570:intron | 35.0% | |
| ATTCAAGATGGTAGAGTCAA+AGG | + | chr1_3:47518657-47518676 | Msa0121570:intron | 35.0% | |
| ! | TCAAGGATTTTGTTGAACTC+CGG | - | chr1_3:47518700-47518719 | None:intergenic | 35.0% |
| ! | CAACAAAATCCTTGATGACT+TGG | + | chr1_3:47518705-47518724 | Msa0121570:intron | 35.0% |
| CAATATTCTCCAAGTCATCA+AGG | - | chr1_3:47518717-47518736 | None:intergenic | 35.0% | |
| GAATATTGATGTGCATCTTG+AGG | + | chr1_3:47518729-47518748 | Msa0121570:intron | 35.0% | |
| ATCATTCTCAATGGCAAAGA+AGG | + | chr1_3:47518814-47518833 | Msa0121570:intron | 35.0% | |
| GTGCTTTAACTGTAACAAGA+TGG | + | chr1_3:47518999-47519018 | Msa0121570:intron | 35.0% | |
| ! | TATACAAGGCATCATTACCA+AGG | - | chr1_3:47519149-47519168 | None:intergenic | 35.0% |
| ATGTACGCATTTGAAAGTTG+AGG | + | chr1_3:47519317-47519336 | Msa0121570:intron | 35.0% | |
| AAAAAAAACTCAGCTTGAGG+TGG | + | chr1_3:47519342-47519361 | Msa0121570:intron | 35.0% | |
| CATGAAGATGTAAGGAATTC+TGG | + | chr1_3:47519440-47519459 | Msa0121570:intron | 35.0% | |
| AGAATGTATAGCATGGCTTA+TGG | + | chr1_3:47519470-47519489 | Msa0121570:intron | 35.0% | |
| GAATGTATAGCATGGCTTAT+GGG | + | chr1_3:47519471-47519490 | Msa0121570:intron | 35.0% | |
| !! | CAATTACCCTTGGTCTTTTA+GGG | - | chr1_3:47519501-47519520 | None:intergenic | 35.0% |
| ATCATAACCTCTATGACCAT+CGG | - | chr1_3:47519660-47519679 | None:intergenic | 35.0% | |
| GAGGTTATGATGTATACTTG+TGG | + | chr1_3:47519669-47519688 | Msa0121570:intron | 35.0% | |
| GTAGAAGTGACTCAAAATTG+GGG | + | chr1_3:47519883-47519902 | Msa0121570:intron | 35.0% | |
| !! | GTTTCTGAAACTGCCAAAAT+CGG | + | chr1_3:47517603-47517622 | Msa0121570:intron | 35.0% |
| ! | TCTTTTCAGCCTTTTCCTTA+AGG | + | chr1_3:47519944-47519963 | Msa0121570:intron | 35.0% |
| ! | CGATTTTTGCCTTAAGGAAA+AGG | - | chr1_3:47519956-47519975 | None:intergenic | 35.0% |
| ! | TATTTGCTGCTGGCAAAAAT+CGG | - | chr1_3:47520004-47520023 | None:intergenic | 35.0% |
| TCAAGGTTTACTCTGATACA+AGG | - | chr1_3:47517816-47517835 | None:intergenic | 35.0% | |
| ACCTTGAACAAAACACTGTT+AGG | + | chr1_3:47517947-47517966 | Msa0121570:intron | 35.0% | |
| !! | TCCTAACAGTGTTTTGTTCA+AGG | - | chr1_3:47517951-47517970 | None:intergenic | 35.0% |
| ! | TAACAGTCACCCACTTATTT+TGG | + | chr1_3:47520522-47520541 | Msa0121570:intron | 35.0% |
| GTCAAGCAACCAAAATAAGT+GGG | - | chr1_3:47518210-47518229 | None:intergenic | 35.0% | |
| AGTCAAGCAACCAAAATAAG+TGG | - | chr1_3:47518211-47518230 | None:intergenic | 35.0% | |
| TGAAGAATTGGAACGATTTG+GGG | - | chr1_3:47520631-47520650 | None:intergenic | 35.0% | |
| TAATGGAGGACTTATTCGTT+TGG | - | chr1_3:47520900-47520919 | None:intergenic | 35.0% | |
| GTCCTCCATTACAAAAAGAA+TGG | + | chr1_3:47520909-47520928 | Msa0121570:intron | 35.0% | |
| ! | CTCCATTCTTTTTGTAATGG+AGG | - | chr1_3:47520914-47520933 | None:intergenic | 35.0% |
| !! | CATATATCTTTTTCACCGCT+AGG | + | chr1_3:47521092-47521111 | Msa0121570:intron | 35.0% |
| GATGTGATTTATTGACCTAG+CGG | - | chr1_3:47521110-47521129 | None:intergenic | 35.0% | |
| ! | AGCTCTAGCTAGTAATTCTA+GGG | - | chr1_3:47521769-47521788 | None:intergenic | 35.0% |
| ! | AAGCTCTAGCTAGTAATTCT+AGG | - | chr1_3:47521770-47521789 | None:intergenic | 35.0% |
| TAGAATTACTAGCTAGAGCT+TGG | + | chr1_3:47521769-47521788 | Msa0121570:intron | 35.0% | |
| ! | TTTCAACCCAGTGATTTTTG+TGG | + | chr1_3:47521805-47521824 | Msa0121570:intron | 35.0% |
| CATTCTCCACAAAAATCACT+GGG | - | chr1_3:47521814-47521833 | None:intergenic | 35.0% | |
| TCATTCTCCACAAAAATCAC+TGG | - | chr1_3:47521815-47521834 | None:intergenic | 35.0% | |
| GAACTAGAGCAGATATACTT+TGG | - | chr1_3:47521933-47521952 | None:intergenic | 35.0% | |
| ATCTAGGGACAACAAATTCT+TGG | + | chr1_3:47522274-47522293 | Msa0121570:intron | 35.0% | |
| !!! | GAGCTTTTTGGTTAAAGAGA+TGG | + | chr1_3:47522313-47522332 | Msa0121570:intron | 35.0% |
| ATGAGTGCAGTGTATAGTAT+AGG | + | chr1_3:47522366-47522385 | Msa0121570:intron | 35.0% | |
| TGAGTGCAGTGTATAGTATA+GGG | + | chr1_3:47522367-47522386 | Msa0121570:intron | 35.0% | |
| !! | TTTGCTGTTCTTGCAAAGAA+GGG | + | chr1_3:47516578-47516597 | Msa0121570:CDS | 35.0% |
| !!! | CTTAACTGATCCTGCTTTTT+TGG | + | chr1_3:47522749-47522768 | Msa0121570:CDS | 35.0% |
| TGTAATTCTATAGGCCTACA+TGG | - | chr1_3:47516722-47516741 | None:intergenic | 35.0% | |
| ! | ATTTTCCACTACTCCATGTG+GGG | + | chr1_3:47516149-47516168 | Msa0121570:intron | 40.0% |
| ! | CCCTCCAGTGAAATTTTCAA+TGG | - | chr1_3:47516224-47516243 | None:intergenic | 40.0% |
| ACCCAATGAATGCAGTGTAT+AGG | + | chr1_3:47516251-47516270 | Msa0121570:intron | 40.0% | |
| CCCTATACACTGCATTCATT+GGG | - | chr1_3:47516255-47516274 | None:intergenic | 40.0% | |
| CCCAATGAATGCAGTGTATA+GGG | + | chr1_3:47516252-47516271 | Msa0121570:intron | 40.0% | |
| GTACGTTGCTACATAATGTC+CGG | - | chr1_3:47516298-47516317 | None:intergenic | 40.0% | |
| GTAACCTTCCATGACATCAT+CGG | - | chr1_3:47516558-47516577 | None:intergenic | 40.0% | |
| !! | CTTTGCTGTTCTTGCAAAGA+AGG | + | chr1_3:47516577-47516596 | Msa0121570:CDS | 40.0% |
| ! | AGAAGGGTGTAGAAACTAGA+AGG | + | chr1_3:47516594-47516613 | Msa0121570:CDS | 40.0% |
| GAGTATGGTTTCAGACAGAA+GGG | + | chr1_3:47516683-47516702 | Msa0121570:CDS | 40.0% | |
| ACACTCAGATTGCGACATAT+TGG | + | chr1_3:47517241-47517260 | Msa0121570:intron | 40.0% | |
| ! | TGAGAGGGAGCCAATATTTT+TGG | - | chr1_3:47517401-47517420 | None:intergenic | 40.0% |
| ! | AAGTGATTTGGGAGTGAGAA+GGG | - | chr1_3:47517475-47517494 | None:intergenic | 40.0% |
| !! | GACCGATTTGGTAAAATCAG+TGG | + | chr1_3:47517627-47517646 | Msa0121570:intron | 40.0% |
| !!! | GGCCACTGATTTTACCAAAT+CGG | - | chr1_3:47517632-47517651 | None:intergenic | 40.0% |
| ! | TGTTTTCAGCCTTTTCCGTA+CGG | + | chr1_3:47517663-47517682 | Msa0121570:intron | 40.0% |
| ! | CTTTTCCGTACGGCAAAAAT+CGG | + | chr1_3:47517673-47517692 | Msa0121570:intron | 40.0% |
| ACTGTTAGGATTGAGTCTCT+TGG | + | chr1_3:47517961-47517980 | Msa0121570:intron | 40.0% | |
| TTGGGACTTTGGGTAGAATT+AGG | + | chr1_3:47517997-47518016 | Msa0121570:intron | 40.0% | |
| !!! | AGTTTTGAGAGATGTAGCGA+AGG | + | chr1_3:47518540-47518559 | Msa0121570:intron | 40.0% |
| GGCATCAATTTGGTCAAAGT+TGG | + | chr1_3:47518573-47518592 | Msa0121570:intron | 40.0% | |
| ! | TGACAAAGTCTTTGGCTCAT+CGG | + | chr1_3:47518608-47518627 | Msa0121570:intron | 40.0% |
| ! | TACCTTGGAAGAAGTTCTAG+CGG | + | chr1_3:47518843-47518862 | Msa0121570:intron | 40.0% |
| GAGTTGAGAGCTCATGAAAA+CGG | + | chr1_3:47518898-47518917 | Msa0121570:intron | 40.0% | |
| AAGGCCTAAGTGTTTCAAGA+GGG | + | chr1_3:47518923-47518942 | Msa0121570:intron | 40.0% | |
| CATTCCCTCTTGAAACACTT+AGG | - | chr1_3:47518930-47518949 | None:intergenic | 40.0% | |
| CTAAGTGTTTCAAGAGGGAA+TGG | + | chr1_3:47518928-47518947 | Msa0121570:intron | 40.0% | |
| !!! | ACTTGTTACCACTTTTTCCC+CGG | - | chr1_3:47518969-47518988 | None:intergenic | 40.0% |
| AATTGTCTCCAAGAGTGATG+AGG | + | chr1_3:47519068-47519087 | Msa0121570:intron | 40.0% | |
| !! | TGCTTTGATGGTGTGTTGTT+GGG | + | chr1_3:47519098-47519117 | Msa0121570:intron | 40.0% |
| GAATGTGATGTTTCTCACCT+TGG | + | chr1_3:47519129-47519148 | Msa0121570:intron | 40.0% | |
| AATGATGCCTTGTATAGCAG+TGG | + | chr1_3:47519153-47519172 | Msa0121570:intron | 40.0% | |
| TTAAACACTCAACATCAGCC+TGG | + | chr1_3:47519191-47519210 | Msa0121570:intron | 40.0% | |
| ACCATGAGTATTCTTTCCAC+CGG | - | chr1_3:47519221-47519240 | None:intergenic | 40.0% | |
| ! | CTTGTTATCTACCTTTGAGG+TGG | + | chr1_3:47519268-47519287 | Msa0121570:intron | 40.0% |
| CAACTAGAGCATATCACCAA+AGG | - | chr1_3:47519403-47519422 | None:intergenic | 40.0% | |
| ATATGCTCTAGTTGTGAGCA+AGG | + | chr1_3:47519409-47519428 | Msa0121570:intron | 40.0% | |
| TATGCTCTAGTTGTGAGCAA+GGG | + | chr1_3:47519410-47519429 | Msa0121570:intron | 40.0% | |
| GGATTACCCTAAAAGACCAA+GGG | + | chr1_3:47519492-47519511 | Msa0121570:intron | 40.0% | |
| !! | CCAATTACCCTTGGTCTTTT+AGG | - | chr1_3:47519502-47519521 | None:intergenic | 40.0% |
| CCTAAAAGACCAAGGGTAAT+TGG | + | chr1_3:47519499-47519518 | Msa0121570:intron | 40.0% | |
| TTGGAAGCAAGTGAATCTTC+AGG | + | chr1_3:47519518-47519537 | Msa0121570:intron | 40.0% | |
| GAGGTTATTGTGTAGACTTG+TGG | + | chr1_3:47519571-47519590 | Msa0121570:intron | 40.0% | |
| CTACCTAAAATTCCCAGTGT+AGG | + | chr1_3:47519596-47519615 | Msa0121570:intron | 40.0% | |
| !! | TGCAATGATGGTTTTCGAGA+AGG | + | chr1_3:47519623-47519642 | Msa0121570:intron | 40.0% |
| !! | AATGATGGTTTTCGAGAAGG+TGG | + | chr1_3:47519626-47519645 | Msa0121570:intron | 40.0% |
| ! | CCAACTACAGTAGGAGTTTT+AGG | - | chr1_3:47519700-47519719 | None:intergenic | 40.0% |
| CCTAAAACTCCTACTGTAGT+TGG | + | chr1_3:47519697-47519716 | Msa0121570:intron | 40.0% | |
| ! | AAGAGAAGCATGGTGACTTA+TGG | + | chr1_3:47519815-47519834 | Msa0121570:intron | 40.0% |
| GCTGAAAAGACAACCAAAAC+TGG | - | chr1_3:47519934-47519953 | None:intergenic | 40.0% | |
| ! | ATTTGCTGCTGGCAAAAATC+GGG | - | chr1_3:47520003-47520022 | None:intergenic | 40.0% |
| ACTGTTAGGATTGAGTCTCT+TGG | + | chr1_3:47517961-47517980 | Msa0121570:intron | 40.0% | |
| TTGGGACTTTGGGTAGAATT+AGG | + | chr1_3:47517997-47518016 | Msa0121570:intron | 40.0% | |
| ! | TCTAATACTGGCCTAGTATG+GGG | - | chr1_3:47520429-47520448 | None:intergenic | 40.0% |
| ! | GTCTAATACTGGCCTAGTAT+GGG | - | chr1_3:47520430-47520449 | None:intergenic | 40.0% |
| TACACAGTTCGGTCTAATAC+TGG | - | chr1_3:47520441-47520460 | None:intergenic | 40.0% | |
| !!! | ACGATTTGGGGTTTTGTTGA+GGG | - | chr1_3:47520619-47520638 | None:intergenic | 40.0% |
| !!! | AACGATTTGGGGTTTTGTTG+AGG | - | chr1_3:47520620-47520639 | None:intergenic | 40.0% |
| !! | TGGAACGATTTGTTGTTCGA+AGG | - | chr1_3:47520701-47520720 | None:intergenic | 40.0% |
| AATGGAGAAAATCCCAACCT+CGG | + | chr1_3:47520927-47520946 | Msa0121570:intron | 40.0% | |
| ACATATCTATGGTGCACAAG+CGG | - | chr1_3:47521209-47521228 | None:intergenic | 40.0% | |
| CACGCACATCTCATTCTTAT+TGG | - | chr1_3:47521283-47521302 | None:intergenic | 40.0% | |
| ! | AATCACTGGGTTGAAAGTTC+AGG | - | chr1_3:47521801-47521820 | None:intergenic | 40.0% |
| ! | CTTAGGGTGTGGCTTTTTAT+AGG | - | chr1_3:47522450-47522469 | None:intergenic | 40.0% |
| TAGCTCAATGCATGCTTTCT+TGG | - | chr1_3:47522615-47522634 | None:intergenic | 40.0% | |
| GTAACCTTTCATGACGTCAT+CGG | - | chr1_3:47522670-47522689 | None:intergenic | 40.0% | |
| !! | CTTTGCTGTTCTTGCAAAGA+AGG | + | chr1_3:47516577-47516596 | Msa0121570:CDS | 40.0% |
| ! | AGAAGGGTGTAGAAACTAGA+AGG | + | chr1_3:47516594-47516613 | Msa0121570:CDS | 40.0% |
| TCAAGCAATCCCAAAAAAGC+AGG | - | chr1_3:47522762-47522781 | None:intergenic | 40.0% | |
| GAGTATGGTTTCAGACAGAA+GGG | + | chr1_3:47516683-47516702 | Msa0121570:CDS | 40.0% | |
| GCCCTATACACTGCATTCAT+TGG | - | chr1_3:47516256-47516275 | None:intergenic | 45.0% | |
| TAGCTCAGTGCATGCTTTCT+CGG | - | chr1_3:47516503-47516522 | None:intergenic | 45.0% | |
| ! | GAAAGCATGCACTGAGCTAT+TGG | + | chr1_3:47516504-47516523 | Msa0121570:intron | 45.0% |
| AGTGAAGATCATGCCACAAC+TGG | + | chr1_3:47516527-47516546 | Msa0121570:CDS | 45.0% | |
| GTGAAGATCATGCCACAACT+GGG | + | chr1_3:47516528-47516547 | Msa0121570:CDS | 45.0% | |
| !! | TGGGATTGCTTGATGATGCT+TGG | + | chr1_3:47516657-47516676 | Msa0121570:CDS | 45.0% |
| !! | GGGATTGCTTGATGATGCTT+GGG | + | chr1_3:47516658-47516677 | Msa0121570:CDS | 45.0% |
| !! | ATTGCTTGATGATGCTTGGG+AGG | + | chr1_3:47516661-47516680 | Msa0121570:CDS | 45.0% |
| GGAGTATGGTTTCAGACAGA+AGG | + | chr1_3:47516682-47516701 | Msa0121570:CDS | 45.0% | |
| GAACTCTTGTGGTTCCATGT+AGG | + | chr1_3:47516705-47516724 | Msa0121570:CDS | 45.0% | |
| AGAAGACACAACACCGTTGA+AGG | + | chr1_3:47516770-47516789 | Msa0121570:intron | 45.0% | |
| AGGATCTTGACTCCGGAATA+TGG | - | chr1_3:47516802-47516821 | None:intergenic | 45.0% | |
| ATGACCACGATGCAGCATAT+GGG | - | chr1_3:47517003-47517022 | None:intergenic | 45.0% | |
| ! | GAAGTGATTTGGGAGTGAGA+AGG | - | chr1_3:47517476-47517495 | None:intergenic | 45.0% |
| ! | ACCAAATCGGTCCCTGATTT+TGG | - | chr1_3:47517619-47517638 | None:intergenic | 45.0% |
| ! | CGATTTTTGCCGTACGGAAA+AGG | - | chr1_3:47517675-47517694 | None:intergenic | 45.0% |
| !! | AGGCACCGATTTCTACTCTT+CGG | - | chr1_3:47517702-47517721 | None:intergenic | 45.0% |
| CTTGAGAGAGAGAGAGAGAA+GGG | + | chr1_3:47517831-47517850 | Msa0121570:intron | 45.0% | |
| TTGAGAGAGAGAGAGAGAAG+GGG | + | chr1_3:47517832-47517851 | Msa0121570:intron | 45.0% | |
| TTCTCTAAGTGGGAGACACT+AGG | + | chr1_3:47517905-47517924 | Msa0121570:intron | 45.0% | |
| TCTCTAAGTGGGAGACACTA+GGG | + | chr1_3:47517906-47517925 | Msa0121570:intron | 45.0% | |
| AGGATTGAGTCTCTTGGTCA+TGG | + | chr1_3:47517967-47517986 | Msa0121570:intron | 45.0% | |
| GGATTGAGTCTCTTGGTCAT+GGG | + | chr1_3:47517968-47517987 | Msa0121570:intron | 45.0% | |
| TCTTGGTCATGGGAAGAGAT+TGG | + | chr1_3:47517978-47517997 | Msa0121570:intron | 45.0% | |
| CTTGGTCATGGGAAGAGATT+GGG | + | chr1_3:47517979-47517998 | Msa0121570:intron | 45.0% | |
| ATGGGAAGAGATTGGGACTT+TGG | + | chr1_3:47517986-47518005 | Msa0121570:intron | 45.0% | |
| TGGGAAGAGATTGGGACTTT+GGG | + | chr1_3:47517987-47518006 | Msa0121570:intron | 45.0% | |
| ! | AGGTCAGCATTGGACCAAAT+TGG | + | chr1_3:47518112-47518131 | Msa0121570:intron | 45.0% |
| ! | GGTCAGCATTGGACCAAATT+GGG | + | chr1_3:47518113-47518132 | Msa0121570:intron | 45.0% |
| TTTGATCCTTGTCCCACGAT+GGG | - | chr1_3:47518298-47518317 | None:intergenic | 45.0% | |
| ATTTGATCCTTGTCCCACGA+TGG | - | chr1_3:47518299-47518318 | None:intergenic | 45.0% | |
| AAGTACCATGGGTTCGAAGT+GGG | + | chr1_3:47518327-47518346 | Msa0121570:intron | 45.0% | |
| AATATCCCACTTCGAACCCA+TGG | - | chr1_3:47518335-47518354 | None:intergenic | 45.0% | |
| ! | AGTGTCATTGTCTTGTGCCT+CGG | + | chr1_3:47518511-47518530 | Msa0121570:intron | 45.0% |
| CTCTCAAAACTTTATCCCCG+AGG | - | chr1_3:47518531-47518550 | None:intergenic | 45.0% | |
| AAACAACCGCGGCATCAATT+TGG | + | chr1_3:47518563-47518582 | Msa0121570:intron | 45.0% | |
| CTTTGACCAAATTGATGCCG+CGG | - | chr1_3:47518572-47518591 | None:intergenic | 45.0% | |
| !! | CAAAGAAGGCACTGTTACCT+TGG | + | chr1_3:47518828-47518847 | Msa0121570:intron | 45.0% |
| CTTGAACTTGGTCAACTCCT+TGG | - | chr1_3:47518878-47518897 | None:intergenic | 45.0% | |
| CAAGGAGTTGACCAAGTTCA+AGG | + | chr1_3:47518876-47518895 | Msa0121570:intron | 45.0% | |
| AGCTCTCAACTCCTTGAACT+TGG | - | chr1_3:47518890-47518909 | None:intergenic | 45.0% | |
| AGAGCTCATGAAAACGGTGA+AGG | + | chr1_3:47518904-47518923 | Msa0121570:intron | 45.0% | |
| GAAGGCCTAAGTGTTTCAAG+AGG | + | chr1_3:47518922-47518941 | Msa0121570:intron | 45.0% | |
| AGTGTTTCAAGAGGGAATGG+TGG | + | chr1_3:47518931-47518950 | Msa0121570:intron | 45.0% | |
| TCCAAGAGTGATGAGGATGT+GGG | + | chr1_3:47519075-47519094 | Msa0121570:intron | 45.0% | |
| !! | GTGCTTTGATGGTGTGTTGT+TGG | + | chr1_3:47519097-47519116 | Msa0121570:intron | 45.0% |
| TACTCATGGTCAATCCGAAG+AGG | + | chr1_3:47519231-47519250 | Msa0121570:intron | 45.0% | |
| TATTCTTACCTCCGCCTCTT+CGG | - | chr1_3:47519248-47519267 | None:intergenic | 45.0% | |
| !! | ACCTTTGAGGTGGAGTTTCA+AGG | + | chr1_3:47519278-47519297 | Msa0121570:intron | 45.0% |
| ACCTTGAAACTCCACCTCAA+AGG | - | chr1_3:47519282-47519301 | None:intergenic | 45.0% | |
| ! | TTTGAGGTGGAGTTTCAAGG+TGG | + | chr1_3:47519281-47519300 | Msa0121570:intron | 45.0% |
| GGGATTACCCTAAAAGACCA+AGG | + | chr1_3:47519491-47519510 | Msa0121570:intron | 45.0% | |
| CACTTGCTTCCAATTACCCT+TGG | - | chr1_3:47519511-47519530 | None:intergenic | 45.0% | |
| GAAGCAAGTGAATCTTCAGG+AGG | + | chr1_3:47519521-47519540 | Msa0121570:intron | 45.0% | |
| GGACGAATTTGATCACTCCA+CGG | + | chr1_3:47519542-47519561 | Msa0121570:intron | 45.0% | |
| GACGAATTTGATCACTCCAC+GGG | + | chr1_3:47519543-47519562 | Msa0121570:intron | 45.0% | |
| ! | CCACCTACACTGGGAATTTT+AGG | - | chr1_3:47519602-47519621 | None:intergenic | 45.0% |
| CCTAAAATTCCCAGTGTAGG+TGG | + | chr1_3:47519599-47519618 | Msa0121570:intron | 45.0% | |
| TCATTGCATCCACCTACACT+GGG | - | chr1_3:47519611-47519630 | None:intergenic | 45.0% | |
| ATCATTGCATCCACCTACAC+TGG | - | chr1_3:47519612-47519631 | None:intergenic | 45.0% | |
| AGTGTAGGTGGATGCAATGA+TGG | + | chr1_3:47519611-47519630 | Msa0121570:intron | 45.0% | |
| !! | ATGGTTTTCGAGAAGGTGGA+AGG | + | chr1_3:47519630-47519649 | Msa0121570:intron | 45.0% |
| TCCTACTGTAGTTGGATGCA+AGG | + | chr1_3:47519705-47519724 | Msa0121570:intron | 45.0% | |
| TCCTTGCATCCAACTACAGT+AGG | - | chr1_3:47519709-47519728 | None:intergenic | 45.0% | |
| AGAGGTTAGGTGGAAACTTG+TGG | + | chr1_3:47519763-47519782 | Msa0121570:intron | 45.0% | |
| TGGAAACTTGTGGAGCTACT+TGG | + | chr1_3:47519773-47519792 | Msa0121570:intron | 45.0% | |
| AAGCAAGGGAAAGAGAAGCA+TGG | + | chr1_3:47519805-47519824 | Msa0121570:intron | 45.0% | |
| ! | TCTGAAACTGCCAAAATCGG+TGG | + | chr1_3:47519908-47519927 | Msa0121570:intron | 45.0% |
| !! | GGCATCGATTTCTACTCTTC+AGG | - | chr1_3:47519982-47520001 | None:intergenic | 45.0% |
| CTCTCTCTCTCTCTCTTTCA+AGG | - | chr1_3:47520113-47520132 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+AGG | + | chr1_3:47520153-47520172 | Msa0121570:intron | 45.0% | |
| GAGAGAGAGAGAGAGAGAAA+GGG | + | chr1_3:47520154-47520173 | Msa0121570:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAAAG+GGG | + | chr1_3:47520155-47520174 | Msa0121570:intron | 45.0% | |
| AGAAAGGGGGCTGAAAACAA+GGG | + | chr1_3:47520169-47520188 | Msa0121570:intron | 45.0% | |
| TTCTCTAAGTGGGAGACACT+AGG | + | chr1_3:47517905-47517924 | Msa0121570:intron | 45.0% | |
| TCTCTAAGTGGGAGACACTA+GGG | + | chr1_3:47517906-47517925 | Msa0121570:intron | 45.0% | |
| AGGATTGAGTCTCTTGGTCA+CGG | + | chr1_3:47517967-47517986 | Msa0121570:intron | 45.0% | |
| ! | CTAATACTGGCCTAGTATGG+GGG | - | chr1_3:47520428-47520447 | None:intergenic | 45.0% |
| ! | GGTCTAATACTGGCCTAGTA+TGG | - | chr1_3:47520431-47520450 | None:intergenic | 45.0% |
| CACAAGATATGTCCGAGGTT+GGG | - | chr1_3:47520942-47520961 | None:intergenic | 45.0% | |
| ACACAAGATATGTCCGAGGT+TGG | - | chr1_3:47520943-47520962 | None:intergenic | 45.0% | |
| CATGACACAAGATATGTCCG+AGG | - | chr1_3:47520947-47520966 | None:intergenic | 45.0% | |
| CATATCTATGGTGCACAAGC+GGG | - | chr1_3:47521208-47521227 | None:intergenic | 45.0% | |
| ! | GAAAGCATGCATTGAGCTAC+TGG | + | chr1_3:47522616-47522635 | Msa0121570:CDS | 45.0% |
| AGTGAAGATCATGCCACAAC+TGG | + | chr1_3:47516527-47516546 | Msa0121570:CDS | 45.0% | |
| GTGAAGATCATGCCACAACT+GGG | + | chr1_3:47516528-47516547 | Msa0121570:CDS | 45.0% | |
| !! | TGGGATTGCTTGATGATGCT+TGG | + | chr1_3:47516657-47516676 | Msa0121570:CDS | 45.0% |
| !! | GGGATTGCTTGATGATGCTT+GGG | + | chr1_3:47516658-47516677 | Msa0121570:CDS | 45.0% |
| !! | ATTGCTTGATGATGCTTGGG+AGG | + | chr1_3:47516661-47516680 | Msa0121570:CDS | 45.0% |
| GGAGTATGGTTTCAGACAGA+AGG | + | chr1_3:47516682-47516701 | Msa0121570:CDS | 45.0% | |
| GAACTCTTGTGGTTCCATGT+AGG | + | chr1_3:47516705-47516724 | Msa0121570:CDS | 45.0% | |
| !!! | ATAAAATAAAAACATATTTT+TGG | + | chr1_3:47517739-47517758 | Msa0121570:intron | 5.0% |
| !!! | TAAAATAAAAACATATTTTT+GGG | + | chr1_3:47517740-47517759 | Msa0121570:intron | 5.0% |
| !!! | TTTTAATTTAGAAAATAAAA+AGG | + | chr1_3:47521504-47521523 | Msa0121570:intron | 5.0% |
| !! | AAATAAAACATATATATTAA+AGG | + | chr1_3:47522100-47522119 | Msa0121570:intron | 5.0% |
| AGCAGATTCTCTCCTGTGAC+TGG | + | chr1_3:47516100-47516119 | Msa0121570:intron | 50.0% | |
| CTTGCCGATGATGTCATGGA+AGG | + | chr1_3:47516551-47516570 | Msa0121570:CDS | 50.0% | |
| GATGATGCTTGGGAGGAGTA+TGG | + | chr1_3:47516668-47516687 | Msa0121570:CDS | 50.0% | |
| CAGACAGAAGGGAACTCTTG+TGG | + | chr1_3:47516694-47516713 | Msa0121570:CDS | 50.0% | |
| ACGATGCAGCATATGGGGTT+GGG | - | chr1_3:47516997-47517016 | None:intergenic | 50.0% | |
| TGACCACGATGCAGCATATG+GGG | - | chr1_3:47517002-47517021 | None:intergenic | 50.0% | |
| GATGACCACGATGCAGCATA+TGG | - | chr1_3:47517004-47517023 | None:intergenic | 50.0% | |
| TTTGGGAGTGAGAAGGGTCA+CGG | - | chr1_3:47517469-47517488 | None:intergenic | 50.0% | |
| GCCAAAATCAGGGACCGATT+TGG | + | chr1_3:47517615-47517634 | Msa0121570:intron | 50.0% | |
| GGCACCCGAAGAGTAGAAAT+CGG | + | chr1_3:47517694-47517713 | Msa0121570:intron | 50.0% | |
| !! | GGCACCGATTTCTACTCTTC+GGG | - | chr1_3:47517701-47517720 | None:intergenic | 50.0% |
| CCTTCTCTCTCTCTCTCTCA+AGG | - | chr1_3:47517833-47517852 | None:intergenic | 50.0% | |
| CCTTGAGAGAGAGAGAGAGA+AGG | + | chr1_3:47517830-47517849 | Msa0121570:intron | 50.0% | |
| TGAGAGAGAGAGAGAGAAGG+GGG | + | chr1_3:47517833-47517852 | Msa0121570:intron | 50.0% | |
| TCCAATGCTGACCTAGTCAG+GGG | - | chr1_3:47518106-47518125 | None:intergenic | 50.0% | |
| GTCCAATGCTGACCTAGTCA+GGG | - | chr1_3:47518107-47518126 | None:intergenic | 50.0% | |
| CAAGTACCATGGGTTCGAAG+TGG | + | chr1_3:47518326-47518345 | Msa0121570:intron | 50.0% | |
| GATGGGTGAATGTGCGTTAC+AGG | + | chr1_3:47518441-47518460 | Msa0121570:intron | 50.0% | |
| GAAGACCGAGATGGTGAACA+AGG | + | chr1_3:47518483-47518502 | Msa0121570:intron | 50.0% | |
| GCACAAGACAATGACACTCC+TGG | - | chr1_3:47518509-47518528 | None:intergenic | 50.0% | |
| ! | GTGTCATTGTCTTGTGCCTC+GGG | + | chr1_3:47518512-47518531 | Msa0121570:intron | 50.0% |
| TGTCATTGTCTTGTGCCTCG+GGG | + | chr1_3:47518513-47518532 | Msa0121570:intron | 50.0% | |
| TGTAGCGAAGGAAACAACCG+CGG | + | chr1_3:47518552-47518571 | Msa0121570:intron | 50.0% | |
| GGTAGAGTCAAAGGCCATCA+TGG | + | chr1_3:47518666-47518685 | Msa0121570:intron | 50.0% | |
| AGCCGCTAGAACTTCTTCCA+AGG | - | chr1_3:47518848-47518867 | None:intergenic | 50.0% | |
| !! | TCTAGCGGCTTTGAGAACCA+AGG | + | chr1_3:47518858-47518877 | Msa0121570:intron | 50.0% |
| GTTTCAAGAGGGAATGGTGG+AGG | + | chr1_3:47518934-47518953 | Msa0121570:intron | 50.0% | |
| ! | ATGGTGGAGGTAGAGGTAAC+CGG | + | chr1_3:47518947-47518966 | Msa0121570:intron | 50.0% |
| AGAGGTAACCGGGGAAAAAG+TGG | + | chr1_3:47518958-47518977 | Msa0121570:intron | 50.0% | |
| CTCCAAGAGTGATGAGGATG+TGG | + | chr1_3:47519074-47519093 | Msa0121570:intron | 50.0% | |
| ACCCACATCCTCATCACTCT+TGG | - | chr1_3:47519079-47519098 | None:intergenic | 50.0% | |
| TGAGGATGTGGGTGCTTTGA+TGG | + | chr1_3:47519086-47519105 | Msa0121570:intron | 50.0% | |
| CAGACGACCACTGCTATACA+AGG | - | chr1_3:47519163-47519182 | None:intergenic | 50.0% | |
| CTTGTATAGCAGTGGTCGTC+TGG | + | chr1_3:47519161-47519180 | Msa0121570:intron | 50.0% | |
| GCCGGTGGAAAGAATACTCA+TGG | + | chr1_3:47519217-47519236 | Msa0121570:intron | 50.0% | |
| TCATGGTCAATCCGAAGAGG+CGG | + | chr1_3:47519234-47519253 | Msa0121570:intron | 50.0% | |
| GGAGTTGAACACACCAGGAA+TGG | + | chr1_3:47519363-47519382 | Msa0121570:intron | 50.0% | |
| CACCAGGAATGGTACGACTA+TGG | + | chr1_3:47519374-47519393 | Msa0121570:intron | 50.0% | |
| CTCCATAGTCGTACCATTCC+TGG | - | chr1_3:47519379-47519398 | None:intergenic | 50.0% | |
| GGTACGACTATGGAGACCTT+TGG | + | chr1_3:47519384-47519403 | Msa0121570:intron | 50.0% | |
| ACAATAACCTCTTCAGCCCG+TGG | - | chr1_3:47519562-47519581 | None:intergenic | 50.0% | |
| AGGCATTCCGATGGTCATAG+AGG | + | chr1_3:47519650-47519669 | Msa0121570:intron | 50.0% | |
| GGATGCAAGGATCTTCACGA+AGG | + | chr1_3:47519718-47519737 | Msa0121570:intron | 50.0% | |
| AGGATCTTCACGAAGGCGAA+AGG | + | chr1_3:47519725-47519744 | Msa0121570:intron | 50.0% | |
| GAAGGCGAAAGGAATTCCGA+CGG | + | chr1_3:47519736-47519755 | Msa0121570:intron | 50.0% | |
| !! | TGTGGAGCTACTTGGTGTAG+TGG | + | chr1_3:47519781-47519800 | Msa0121570:intron | 50.0% |
| !! | GTGGAGCTACTTGGTGTAGT+GGG | + | chr1_3:47519782-47519801 | Msa0121570:intron | 50.0% |
| !! | ACTTGGTGTAGTGGGAAGCA+AGG | + | chr1_3:47519790-47519809 | Msa0121570:intron | 50.0% |
| ! | CTTGGTGTAGTGGGAAGCAA+GGG | + | chr1_3:47519791-47519810 | Msa0121570:intron | 50.0% |
| !!! | CCAAAACTGGCCACCGATTT+TGG | - | chr1_3:47519921-47519940 | None:intergenic | 50.0% |
| ! | CCAAAATCGGTGGCCAGTTT+TGG | + | chr1_3:47519918-47519937 | Msa0121570:intron | 50.0% |
| !!! | AGGCGCCGATTTTTGCCTTA+AGG | - | chr1_3:47519962-47519981 | None:intergenic | 50.0% |
| GAGAGAGAGAGAGAGAAAGG+GGG | + | chr1_3:47520156-47520175 | Msa0121570:intron | 50.0% | |
| GAGAAAGGGGGCTGAAAACA+AGG | + | chr1_3:47520168-47520187 | Msa0121570:intron | 50.0% | |
| TAAGTGGGAGACACTAGGGT+TGG | + | chr1_3:47520233-47520252 | Msa0121570:intron | 50.0% | |
| AAGTGGGAGACACTAGGGTT+GGG | + | chr1_3:47520234-47520253 | Msa0121570:intron | 50.0% | |
| GGATTGAGTCTCTTGGTCAC+GGG | + | chr1_3:47520291-47520310 | Msa0121570:intron | 50.0% | |
| TCTTGGTCACGGGAAGAGAT+TGG | + | chr1_3:47520301-47520320 | Msa0121570:intron | 50.0% | |
| CTTGGTCACGGGAAGAGATT+GGG | + | chr1_3:47520302-47520321 | Msa0121570:intron | 50.0% | |
| ACGGGAAGAGATTGGGACTT+TGG | + | chr1_3:47520309-47520328 | Msa0121570:intron | 50.0% | |
| CGGGAAGAGATTGGGACTTT+GGG | + | chr1_3:47520310-47520329 | Msa0121570:intron | 50.0% | |
| CTTGCCGATGACGTCATGAA+AGG | + | chr1_3:47522663-47522682 | Msa0121570:CDS | 50.0% | |
| GATGATGCTTGGGAGGAGTA+TGG | + | chr1_3:47516668-47516687 | Msa0121570:CDS | 50.0% | |
| CAGACAGAAGGGAACTCTTG+TGG | + | chr1_3:47516694-47516713 | Msa0121570:CDS | 50.0% | |
| TCTCCTGTGACTGGAGAGTC+CGG | + | chr1_3:47516109-47516128 | Msa0121570:intron | 55.0% | |
| TCAATGTTGAGGGCCCCACA+TGG | - | chr1_3:47516165-47516184 | None:intergenic | 55.0% | |
| ATCATCGGCAAGCCCAGTTG+TGG | - | chr1_3:47516543-47516562 | None:intergenic | 55.0% | |
| TGGGCTTGCCGATGATGTCA+TGG | + | chr1_3:47516547-47516566 | Msa0121570:CDS | 55.0% | |
| CACGATGCAGCATATGGGGT+TGG | - | chr1_3:47516998-47517017 | None:intergenic | 55.0% | |
| CAACCCCATATGCTGCATCG+TGG | + | chr1_3:47516996-47517015 | Msa0121570:intron | 55.0% | |
| !!! | GGGTGCCGATTTTTGCCGTA+CGG | - | chr1_3:47517681-47517700 | None:intergenic | 55.0% |
| TAAGTGGGAGACACTAGGGC+CGG | + | chr1_3:47517910-47517929 | Msa0121570:intron | 55.0% | |
| CCAATGCTGACCTAGTCAGG+GGG | - | chr1_3:47518105-47518124 | None:intergenic | 55.0% | |
| GGTCCAATGCTGACCTAGTC+AGG | - | chr1_3:47518108-47518127 | None:intergenic | 55.0% | |
| ACAACAATTGGCGCCCATCG+TGG | + | chr1_3:47518282-47518301 | Msa0121570:intron | 55.0% | |
| CAACAATTGGCGCCCATCGT+GGG | + | chr1_3:47518283-47518302 | Msa0121570:intron | 55.0% | |
| !! | CCTGGCCTTGTTCACCATCT+CGG | - | chr1_3:47518491-47518510 | None:intergenic | 55.0% |
| GGCCATCATGGAGCAACTTC+CGG | + | chr1_3:47518678-47518697 | Msa0121570:intron | 55.0% | |
| CTCCGGAAGTTGCTCCATGA+TGG | - | chr1_3:47518683-47518702 | None:intergenic | 55.0% | |
| ! | AGAGGGAATGGTGGAGGTAG+AGG | + | chr1_3:47518940-47518959 | Msa0121570:intron | 55.0% |
| TGGTGGAGGTAGAGGTAACC+GGG | + | chr1_3:47518948-47518967 | Msa0121570:intron | 55.0% | |
| TCAACATCAGCCTGGAGAGC+CGG | + | chr1_3:47519199-47519218 | Msa0121570:intron | 55.0% | |
| !! | ATTCTTTCCACCGGCTCTCC+AGG | - | chr1_3:47519212-47519231 | None:intergenic | 55.0% |
| GAGGTGGAGTTGAACACACC+AGG | + | chr1_3:47519358-47519377 | Msa0121570:intron | 55.0% | |
| !! | GAAGGTGGAAGGCATTCCGA+TGG | + | chr1_3:47519641-47519660 | Msa0121570:intron | 55.0% |
| AGGAATTCCGACGGCTGAAG+AGG | + | chr1_3:47519745-47519764 | Msa0121570:intron | 55.0% | |
| TTCCGACGGCTGAAGAGGTT+AGG | + | chr1_3:47519750-47519769 | Msa0121570:intron | 55.0% | |
| CACCTAACCTCTTCAGCCGT+CGG | - | chr1_3:47519755-47519774 | None:intergenic | 55.0% | |
| GGGGGCTGAAAACAAGGGTT+TGG | + | chr1_3:47520174-47520193 | Msa0121570:intron | 55.0% | |
| TCTGCTCTCTCCCCCATACT+AGG | + | chr1_3:47520415-47520434 | Msa0121570:intron | 55.0% | |
| TCACCGGACTCTCCAGTCAC+AGG | - | chr1_3:47516115-47516134 | None:intergenic | 60.0% | |
| AAGTGGGAGACACTAGGGCC+GGG | + | chr1_3:47517911-47517930 | Msa0121570:intron | 60.0% | |
| CCCCCTGACTAGGTCAGCAT+TGG | + | chr1_3:47518102-47518121 | Msa0121570:intron | 60.0% | |
| ACAGGTCACCATGTCGCACG+CGG | + | chr1_3:47518459-47518478 | Msa0121570:intron | 60.0% | |
| CCGAGATGGTGAACAAGGCC+AGG | + | chr1_3:47518488-47518507 | Msa0121570:intron | 60.0% | |
| GGTGGAGGTAGAGGTAACCG+GGG | + | chr1_3:47518949-47518968 | Msa0121570:intron | 60.0% | |
| TGGTCAATCCGAAGAGGCGG+AGG | + | chr1_3:47519237-47519256 | Msa0121570:intron | 60.0% | |
| ! | GATCACTCCACGGGCTGAAG+AGG | + | chr1_3:47519552-47519571 | Msa0121570:intron | 60.0% |
| CGACGGCTGAAGAGGTTAGG+TGG | + | chr1_3:47519753-47519772 | Msa0121570:intron | 60.0% | |
| GTCATCGGCAAGCCCAGTTG+TGG | - | chr1_3:47522655-47522674 | None:intergenic | 60.0% | |
| GAGGGCCCCACATGGAGTAG+TGG | - | chr1_3:47516157-47516176 | None:intergenic | 65.0% | |
| GGGAGTGAGAAGGGTCACGG+AGG | - | chr1_3:47517466-47517485 | None:intergenic | 65.0% | |
| GCTGCTCTCTCCCCCTGACT+AGG | + | chr1_3:47518092-47518111 | Msa0121570:intron | 65.0% | |
| TTGGCGCCCATCGTGGGACA+AGG | + | chr1_3:47518289-47518308 | Msa0121570:intron | 65.0% | |
| GGTCTTCTCCGCGTGCGACA+TGG | - | chr1_3:47518470-47518489 | None:intergenic | 65.0% | |
| GCACGCGGAGAAGACCGAGA+TGG | + | chr1_3:47518474-47518493 | Msa0121570:intron | 65.0% | |
| ACATCAGCCTGGAGAGCCGG+TGG | + | chr1_3:47519202-47519221 | Msa0121570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 47516055 | 47522881 | 47516055 | ID=Msa0121570;Name=Msa0121570 |
| chr1_3 | mRNA | 47516055 | 47522881 | 47516055 | ID=Msa0121570-mRNA-1;Parent=Msa0121570;Name=Msa0121570-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|0.66|0|0|3|0|182 |
| chr1_3 | exon | 47516055 | 47516060 | 47516055 | ID=Msa0121570-mRNA-1:exon:14350;Parent=Msa0121570-mRNA-1 |
| chr1_3 | exon | 47516509 | 47516755 | 47516509 | ID=Msa0121570-mRNA-1:exon:14351;Parent=Msa0121570-mRNA-1 |
| chr1_3 | exon | 47522586 | 47522881 | 47522586 | ID=Msa0121570-mRNA-1:exon:14352;Parent=Msa0121570-mRNA-1 |
| chr1_3 | CDS | 47516055 | 47516060 | 47516055 | ID=Msa0121570-mRNA-1:cds;Parent=Msa0121570-mRNA-1 |
| chr1_3 | CDS | 47516509 | 47516755 | 47516509 | ID=Msa0121570-mRNA-1:cds;Parent=Msa0121570-mRNA-1 |
| chr1_3 | CDS | 47522586 | 47522881 | 47522586 | ID=Msa0121570-mRNA-1:cds;Parent=Msa0121570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
