AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0132480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132480 MtrunA17_Chr1g0201741 97.080 137 4 0 17 153 84 220 2.89e-92 268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132480 AT1G21090.1 44.521 146 70 4 17 159 90 227 1.95e-30 110
Msa0132480 AT1G21090.2 47.445 137 61 4 17 150 90 218 4.31e-30 109

Find 103 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACAAAACCTCTTCTTATT+TGG 0.164436 1_3:-63549467 Msa0132480:five_prime_UTR
CCATTTCACCACATTTAATT+TGG 0.168072 1_3:+63548008 None:intergenic
CACTGACAGATGACAAATTT+TGG 0.189696 1_3:-63547690 Msa0132480:three_prime_UTR
TTACAGTTTGTTAGGCCTTT+AGG 0.236788 1_3:-63548469 Msa0132480:three_prime_UTR
TACAGTTTGTTAGGCCTTTA+GGG 0.260799 1_3:-63548468 Msa0132480:three_prime_UTR
ATAAGAAAGTAAAAGAAAAT+AGG 0.262906 1_3:+63549388 None:intergenic
AGTATTATTCATATAATCTT+TGG 0.268984 1_3:+63548319 None:intergenic
CAAAGAGTGAGAGAAGAGTA+TGG 0.286059 1_3:+63548564 None:intergenic
CCAAATTAAATGTGGTGAAA+TGG 0.289497 1_3:-63548008 Msa0132480:three_prime_UTR
CCTTTAGGGTTATGTTTAGA+TGG 0.295303 1_3:-63548454 Msa0132480:three_prime_UTR
TAATTACCATTAAAGCAAAA+AGG 0.296844 1_3:+63547824 None:intergenic
TCATGCTGCTGTGCACATTA+TGG 0.298840 1_3:-63548109 Msa0132480:three_prime_UTR
TTTGCTTTAATGGTAATTAT+GGG 0.315260 1_3:-63547820 Msa0132480:three_prime_UTR
TCCACCACAATTCTTGTTGA+TGG 0.315465 1_3:-63549337 Msa0132480:exon
GTTATTGGTGAACTTGCTTC+TGG 0.318387 1_3:+63548727 None:intergenic
CAGGTGATGATTGGATCATT+TGG 0.323133 1_3:-63548135 Msa0132480:three_prime_UTR
CTTGCTTCTGGTGTTGGTGC+TGG 0.326503 1_3:+63548739 None:intergenic
GGTACTAATGGAAGTGTTAT+TGG 0.342544 1_3:+63548712 None:intergenic
TTGATGAGTAAAGAACTAAT+TGG 0.344771 1_3:-63548296 Msa0132480:three_prime_UTR
ATCACTCTTAAAGCTACTTT+AGG 0.356772 1_3:+63547984 None:intergenic
TCCTGAGATTACAGTTTGTT+AGG 0.357879 1_3:-63548477 Msa0132480:three_prime_UTR
CTACCTTTGTATGGTACTAA+TGG 0.361276 1_3:+63548700 None:intergenic
CCCATCACTGTGAGTAGTTA+TGG 0.362812 1_3:+63549520 None:intergenic
TTCTCAGAAGCTAGCCATAA+AGG 0.371391 1_3:-63548899 Msa0132480:CDS
CAAATTAAATGTGGTGAAAT+GGG 0.381317 1_3:-63548007 Msa0132480:three_prime_UTR
ACTACTCCAGGTCCTTCTTC+AGG 0.382607 1_3:-63548829 Msa0132480:CDS
GGTGAACTTGCTTCTGGTGT+TGG 0.389269 1_3:+63548733 None:intergenic
ACAAGCCTTGAGTGAGTCAT+TGG 0.395814 1_3:+63548927 None:intergenic
CAGTGGCACCCTTCTCGTGT+TGG 0.410518 1_3:-63548970 Msa0132480:CDS
CTGTAAGAAGAAAGAATTGT+AGG 0.418926 1_3:-63548075 Msa0132480:three_prime_UTR
TCTGGTGTTGGTGCTGGACC+TGG 0.421352 1_3:+63548745 None:intergenic
GGCATTGGTGAAGAAGCTTC+TGG 0.441866 1_3:+63548853 None:intergenic
GGTTGACTGCAGGTGATGAT+TGG 0.444613 1_3:-63548144 Msa0132480:three_prime_UTR
GAGATTGATGAATTACTGAT+TGG 0.448953 1_3:-63548184 Msa0132480:three_prime_UTR
CTTTAGGGTTATGTTTAGAT+GGG 0.455279 1_3:-63548453 Msa0132480:three_prime_UTR
GTTATGTGAGTATTTATCTC+TGG 0.458421 1_3:+63549497 None:intergenic
AATCTTCTCCTTCATTTCCA+TGG 0.462730 1_3:-63548795 Msa0132480:CDS
GAACCTTGGTGAGGACGAAA+TGG 0.464009 1_3:+63548772 None:intergenic
TGGCTATGTTGTATTGTATC+TGG 0.464353 1_3:+63547773 None:intergenic
CGAAATGGCCATGGAAATGA+AGG 0.472315 1_3:+63548787 None:intergenic
CCATCACCACTACCTTTGTA+TGG 0.475205 1_3:+63548691 None:intergenic
TTGCAAATCCAAAGAGCAAA+AGG 0.490872 1_3:+63547907 None:intergenic
CAAAATTTGTCATCTGTCAG+TGG 0.497362 1_3:+63547691 None:intergenic
GAAGAAGGACCTGGAGTAGT+TGG 0.497886 1_3:+63548832 None:intergenic
GCCTAACAAACTGTAATCTC+AGG 0.498802 1_3:+63548476 None:intergenic
GGAGCTTTGAGTCTGAAATC+AGG 0.500474 1_3:-63547738 Msa0132480:three_prime_UTR
CCAGTAGGTAGAGGAACTGC+AGG 0.504828 1_3:+63548646 None:intergenic
TACTTCTGGTCATCAAGGAC+AGG 0.518066 1_3:-63548590 Msa0132480:CDS
TGGGAGAAATGGGGTAGGGA+TGG 0.519511 1_3:-63548035 Msa0132480:three_prime_UTR
TCACCAATGCCAACTACTCC+AGG 0.520351 1_3:-63548841 Msa0132480:CDS
TTGCTTTAATGGTAATTATG+GGG 0.522550 1_3:-63547819 Msa0132480:three_prime_UTR
TGTCTATTGTGGTTGACTGC+AGG 0.529581 1_3:-63548154 Msa0132480:three_prime_UTR
CCTGCAGTTCCTCTACCTAC+TGG 0.533665 1_3:-63548646 Msa0132480:CDS
CCATCTAAACATAACCCTAA+AGG 0.536177 1_3:+63548454 None:intergenic
AACATAGCCACATGGTGGTG+GGG 0.540155 1_3:-63547760 Msa0132480:three_prime_UTR
CTTGCTACTTCTGGTCATCA+AGG 0.545692 1_3:-63548595 Msa0132480:CDS
TGTAAGAAGAAAGAATTGTA+GGG 0.547047 1_3:-63548074 Msa0132480:three_prime_UTR
CCATACAAAGGTAGTGGTGA+TGG 0.547473 1_3:-63548691 Msa0132480:CDS
ACAACATAGCCACATGGTGG+TGG 0.548764 1_3:-63547762 Msa0132480:three_prime_UTR
TGTATATCTCCACCTGAAGA+AGG 0.549316 1_3:+63548817 None:intergenic
CCTCACCAAGGTTCTTCACC+AGG 0.550909 1_3:-63548763 Msa0132480:CDS
AAGAACCCCACTGTTTCCAT+TGG 0.557299 1_3:-63549301 Msa0132480:CDS
ACATAGCCACATGGTGGTGG+GGG 0.562645 1_3:-63547759 Msa0132480:three_prime_UTR
TCCATAACTACTCACAGTGA+TGG 0.563117 1_3:-63549521 Msa0132480:five_prime_UTR
TTGGGAGTTGATGTCTATTG+TGG 0.565365 1_3:-63548165 Msa0132480:three_prime_UTR
CAACATAGCCACATGGTGGT+GGG 0.567113 1_3:-63547761 Msa0132480:three_prime_UTR
AGATTGATGAATTACTGATT+GGG 0.568798 1_3:-63548183 Msa0132480:three_prime_UTR
CTGGACCTGGTGAAGAACCT+TGG 0.569624 1_3:+63548758 None:intergenic
GGACCTGGAGTAGTTGGCAT+TGG 0.570624 1_3:+63548838 None:intergenic
CTTACTGATGGAATCACCAA+TGG 0.572310 1_3:+63549285 None:intergenic
CCATAACTACTCACAGTGAT+GGG 0.573983 1_3:-63549520 Msa0132480:five_prime_UTR
GAGAAAGACCAAATAAGAAG+AGG 0.574292 1_3:+63549459 None:intergenic
AAAGAGTGAGAGAAGAGTAT+GGG 0.577010 1_3:+63548565 None:intergenic
TGGTGAGGACGAAATGGCCA+TGG 0.581170 1_3:+63548778 None:intergenic
TTAGTACCATACAAAGGTAG+TGG 0.581801 1_3:-63548697 Msa0132480:CDS
CTTGAGTGAGTCATTGGAGA+AGG 0.585494 1_3:+63548933 None:intergenic
GAATCACCAATGGAAACAGT+GGG 0.586434 1_3:+63549295 None:intergenic
CTTGATGACCAGAAGTAGCA+AGG 0.589614 1_3:+63548596 None:intergenic
TCTCCACCTGAAGAAGGACC+TGG 0.590998 1_3:+63548823 None:intergenic
TTGATGACCAGAAGTAGCAA+GGG 0.596636 1_3:+63548597 None:intergenic
TCCATCAACAAGAATTGTGG+TGG 0.597986 1_3:+63549336 None:intergenic
GCAGAATCAACTTCACCAGT+AGG 0.602877 1_3:+63548631 None:intergenic
AAAATTTGTCATCTGTCAGT+GGG 0.608817 1_3:+63547692 None:intergenic
GGAATCACCAATGGAAACAG+TGG 0.609209 1_3:+63549294 None:intergenic
TCAACTTCACCAGTAGGTAG+AGG 0.610264 1_3:+63548637 None:intergenic
TATAAGAGCATCTTAATACA+TGG 0.612476 1_3:+63547954 None:intergenic
CTTCTCCAATGACTCACTCA+AGG 0.618317 1_3:-63548932 Msa0132480:CDS
AGATCCATCAACAAGAATTG+TGG 0.619785 1_3:+63549333 None:intergenic
ATGGTAAACCAAATTAAATG+TGG 0.620879 1_3:-63548016 Msa0132480:three_prime_UTR
AAATTGGGAGAAATGGGGTA+GGG 0.624591 1_3:-63548039 Msa0132480:three_prime_UTR
GCAGGGTTACTGTTAATGAA+AGG 0.625640 1_3:+63548664 None:intergenic
AAAATTGGGAGAAATGGGGT+AGG 0.631871 1_3:-63548040 Msa0132480:three_prime_UTR
TGGCCATTTCGTCCTCACCA+AGG 0.633338 1_3:-63548775 Msa0132480:CDS
ACTCCAGGTCCTTCTTCAGG+TGG 0.643588 1_3:-63548826 Msa0132480:CDS
TTGTTGATGGATCTTCAGAG+TGG 0.678120 1_3:-63549324 Msa0132480:exon
TGATGACCAGAAGTAGCAAG+GGG 0.680310 1_3:+63548598 None:intergenic
CTTCCATTAGTACCATACAA+AGG 0.688022 1_3:-63548703 Msa0132480:CDS
TACAATACAACATAGCCACA+TGG 0.698053 1_3:-63547768 Msa0132480:three_prime_UTR
CAGTAGGTAGAGGAACTGCA+GGG 0.724749 1_3:+63548647 None:intergenic
AATACAACATAGCCACATGG+TGG 0.754648 1_3:-63547765 Msa0132480:three_prime_UTR
CCTGGTGAAGAACCTTGGTG+AGG 0.764235 1_3:+63548763 None:intergenic
AATCACCAATGGAAACAGTG+GGG 0.793032 1_3:+63549296 None:intergenic
GATGACCAGAAGTAGCAAGG+GGG 0.807895 1_3:+63548599 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAATAAAAAAAAA+AGG + chr1_3:63547681-63547700 None:intergenic 0.0%
!! AAAATATAAATAAAAAAAAA+AGG + chr1_3:63547681-63547700 None:intergenic 0.0%
!! ATAAGAAAGTAAAAGAAAAT+AGG + chr1_3:63547846-63547865 None:intergenic 15.0%
!! AGTATTATTCATATAATCTT+TGG + chr1_3:63548915-63548934 None:intergenic 15.0%
!! ATAAGAAAGTAAAAGAAAAT+AGG + chr1_3:63547846-63547865 None:intergenic 15.0%
!! AGTATTATTCATATAATCTT+TGG + chr1_3:63548915-63548934 None:intergenic 15.0%
!!! TTGTTTTTTAGGGAAAATTT+CGG + chr1_3:63547799-63547818 None:intergenic 20.0%
!! CTGAAAAAATGAAAGAAAAT+TGG + chr1_3:63548244-63548263 None:intergenic 20.0%
!!! ATTTTCTTTCATTTTTTCAG+TGG - chr1_3:63548244-63548263 Msa0132480:three_prime_UTR 20.0%
!! AATTACCATTAAAGCAAAAA+GGG + chr1_3:63549409-63549428 None:intergenic 20.0%
!! TAATTACCATTAAAGCAAAA+AGG + chr1_3:63549410-63549429 None:intergenic 20.0%
!!! TTTTGCTTTAATGGTAATTA+TGG - chr1_3:63549410-63549429 Msa0132480:five_prime_UTR 20.0%
!! TTTGCTTTAATGGTAATTAT+GGG - chr1_3:63549411-63549430 Msa0132480:five_prime_UTR 20.0%
!!! GTCATTTTAATTCTTATCTT+AGG + chr1_3:63549439-63549458 None:intergenic 20.0%
!!! TTGTTTTTTAGGGAAAATTT+CGG + chr1_3:63547799-63547818 None:intergenic 20.0%
!! CTGAAAAAATGAAAGAAAAT+TGG + chr1_3:63548244-63548263 None:intergenic 20.0%
!!! ATTTTCTTTCATTTTTTCAG+TGG - chr1_3:63548244-63548263 Msa0132480:three_prime_UTR 20.0%
!! AATTACCATTAAAGCAAAAA+GGG + chr1_3:63549409-63549428 None:intergenic 20.0%
!! TAATTACCATTAAAGCAAAA+AGG + chr1_3:63549410-63549429 None:intergenic 20.0%
!!! TTTTGCTTTAATGGTAATTA+TGG - chr1_3:63549410-63549429 Msa0132480:five_prime_UTR 20.0%
!! TTTGCTTTAATGGTAATTAT+GGG - chr1_3:63549411-63549430 Msa0132480:five_prime_UTR 20.0%
!!! GTCATTTTAATTCTTATCTT+AGG + chr1_3:63549439-63549458 None:intergenic 20.0%
!!! TGAATGTGCTTTGTTTTTTA+GGG + chr1_3:63547809-63547828 None:intergenic 25.0%
!!! ATGAATGTGCTTTGTTTTTT+AGG + chr1_3:63547810-63547829 None:intergenic 25.0%
! TTGATGAGTAAAGAACTAAT+TGG - chr1_3:63548935-63548954 Msa0132480:CDS 25.0%
!!! ACATTGAATGAGTTTTAAGA+AGG - chr1_3:63548958-63548977 Msa0132480:CDS 25.0%
!! AGATTGATGAATTACTGATT+GGG - chr1_3:63549048-63549067 Msa0132480:intron 25.0%
! TGTAAGAAGAAAGAATTGTA+GGG - chr1_3:63549157-63549176 Msa0132480:intron 25.0%
! ATGGTAAACCAAATTAAATG+TGG - chr1_3:63549215-63549234 Msa0132480:intron 25.0%
! CAAATTAAATGTGGTGAAAT+GGG - chr1_3:63549224-63549243 Msa0132480:intron 25.0%
!!! TATAAGAGCATCTTAATACA+TGG + chr1_3:63549280-63549299 None:intergenic 25.0%
! AAAAAGGGAATAATTAGAAG+AGG + chr1_3:63549394-63549413 None:intergenic 25.0%
!! TTATTCCCTTTTTGCTTTAA+TGG - chr1_3:63549401-63549420 Msa0132480:five_prime_UTR 25.0%
! TTGCTTTAATGGTAATTATG+GGG - chr1_3:63549412-63549431 Msa0132480:five_prime_UTR 25.0%
!!! TGAATGTGCTTTGTTTTTTA+GGG + chr1_3:63547809-63547828 None:intergenic 25.0%
!!! ATGAATGTGCTTTGTTTTTT+AGG + chr1_3:63547810-63547829 None:intergenic 25.0%
! TTGATGAGTAAAGAACTAAT+TGG - chr1_3:63548935-63548954 Msa0132480:CDS 25.0%
!!! ACATTGAATGAGTTTTAAGA+AGG - chr1_3:63548958-63548977 Msa0132480:CDS 25.0%
!! AGATTGATGAATTACTGATT+GGG - chr1_3:63549048-63549067 Msa0132480:intron 25.0%
! TGTAAGAAGAAAGAATTGTA+GGG - chr1_3:63549157-63549176 Msa0132480:intron 25.0%
! ATGGTAAACCAAATTAAATG+TGG - chr1_3:63549215-63549234 Msa0132480:intron 25.0%
! CAAATTAAATGTGGTGAAAT+GGG - chr1_3:63549224-63549243 Msa0132480:intron 25.0%
!!! TATAAGAGCATCTTAATACA+TGG + chr1_3:63549280-63549299 None:intergenic 25.0%
! AAAAAGGGAATAATTAGAAG+AGG + chr1_3:63549394-63549413 None:intergenic 25.0%
!! TTATTCCCTTTTTGCTTTAA+TGG - chr1_3:63549401-63549420 Msa0132480:five_prime_UTR 25.0%
! TTGCTTTAATGGTAATTATG+GGG - chr1_3:63549412-63549431 Msa0132480:five_prime_UTR 25.0%
GTTATGTGAGTATTTATCTC+TGG + chr1_3:63547737-63547756 None:intergenic 30.0%
CTACAAAACCTCTTCTTATT+TGG - chr1_3:63547764-63547783 Msa0132480:three_prime_UTR 30.0%
ATGGTGATAATACTTACTGA+TGG + chr1_3:63547961-63547980 None:intergenic 30.0%
GAACCAAGATGAAATTTGAA+GGG + chr1_3:63548164-63548183 None:intergenic 30.0%
AGAACCAAGATGAAATTTGA+AGG + chr1_3:63548165-63548184 None:intergenic 30.0%
! TTTTGTTGGAGTTACCTTTA+TGG + chr1_3:63548349-63548368 None:intergenic 30.0%
!! CTTTAGGGTTATGTTTAGAT+GGG - chr1_3:63548778-63548797 Msa0132480:CDS 30.0%
GAGATTGATGAATTACTGAT+TGG - chr1_3:63549047-63549066 Msa0132480:intron 30.0%
CTGTAAGAAGAAAGAATTGT+AGG - chr1_3:63549156-63549175 Msa0132480:intron 30.0%
TATGCAAAAATTGGGAGAAA+TGG - chr1_3:63549185-63549204 Msa0132480:intron 30.0%
ATGCAAAAATTGGGAGAAAT+GGG - chr1_3:63549186-63549205 Msa0132480:intron 30.0%
CCATTTCACCACATTTAATT+TGG + chr1_3:63549226-63549245 None:intergenic 30.0%
CCAAATTAAATGTGGTGAAA+TGG - chr1_3:63549223-63549242 Msa0132480:intron 30.0%
! ATCACTCTTAAAGCTACTTT+AGG + chr1_3:63549250-63549269 None:intergenic 30.0%
AAAATTTGTCATCTGTCAGT+GGG + chr1_3:63549542-63549561 None:intergenic 30.0%
GTTATGTGAGTATTTATCTC+TGG + chr1_3:63547737-63547756 None:intergenic 30.0%
CTACAAAACCTCTTCTTATT+TGG - chr1_3:63547764-63547783 Msa0132480:three_prime_UTR 30.0%
ATGGTGATAATACTTACTGA+TGG + chr1_3:63547961-63547980 None:intergenic 30.0%
GAACCAAGATGAAATTTGAA+GGG + chr1_3:63548164-63548183 None:intergenic 30.0%
AGAACCAAGATGAAATTTGA+AGG + chr1_3:63548165-63548184 None:intergenic 30.0%
! TTTTGTTGGAGTTACCTTTA+TGG + chr1_3:63548349-63548368 None:intergenic 30.0%
!! CTTTAGGGTTATGTTTAGAT+GGG - chr1_3:63548778-63548797 Msa0132480:CDS 30.0%
GAGATTGATGAATTACTGAT+TGG - chr1_3:63549047-63549066 Msa0132480:intron 30.0%
CTGTAAGAAGAAAGAATTGT+AGG - chr1_3:63549156-63549175 Msa0132480:intron 30.0%
TATGCAAAAATTGGGAGAAA+TGG - chr1_3:63549185-63549204 Msa0132480:intron 30.0%
ATGCAAAAATTGGGAGAAAT+GGG - chr1_3:63549186-63549205 Msa0132480:intron 30.0%
CCATTTCACCACATTTAATT+TGG + chr1_3:63549226-63549245 None:intergenic 30.0%
CCAAATTAAATGTGGTGAAA+TGG - chr1_3:63549223-63549242 Msa0132480:intron 30.0%
! ATCACTCTTAAAGCTACTTT+AGG + chr1_3:63549250-63549269 None:intergenic 30.0%
AAAATTTGTCATCTGTCAGT+GGG + chr1_3:63549542-63549561 None:intergenic 30.0%
GAGAAAGACCAAATAAGAAG+AGG + chr1_3:63547775-63547794 None:intergenic 35.0%
AGATCCATCAACAAGAATTG+TGG + chr1_3:63547901-63547920 None:intergenic 35.0%
!! AGCTAGCTGCAATTGTTTTA+TGG + chr1_3:63547980-63547999 None:intergenic 35.0%
!! TCTGGTTCTTGAAAATGTAG+AGG + chr1_3:63548067-63548086 None:intergenic 35.0%
AGTGAAATTGCAGAGATTGA+AGG + chr1_3:63548093-63548112 None:intergenic 35.0%
AGAAAAAACCAACACGAGAA+GGG + chr1_3:63548272-63548291 None:intergenic 35.0%
TAGAAAAAACCAACACGAGA+AGG + chr1_3:63548273-63548292 None:intergenic 35.0%
AATCTTCTCCTTCATTTCCA+TGG - chr1_3:63548436-63548455 Msa0132480:three_prime_UTR 35.0%
!! GGTACTAATGGAAGTGTTAT+TGG + chr1_3:63548522-63548541 None:intergenic 35.0%
CTTCCATTAGTACCATACAA+AGG - chr1_3:63548528-63548547 Msa0132480:three_prime_UTR 35.0%
CTACCTTTGTATGGTACTAA+TGG + chr1_3:63548534-63548553 None:intergenic 35.0%
TTAGTACCATACAAAGGTAG+TGG - chr1_3:63548534-63548553 Msa0132480:three_prime_UTR 35.0%
! AAAGAGTGAGAGAAGAGTAT+GGG + chr1_3:63548669-63548688 None:intergenic 35.0%
! TCCTGAGATTACAGTTTGTT+AGG - chr1_3:63548754-63548773 Msa0132480:CDS 35.0%
!! TTACAGTTTGTTAGGCCTTT+AGG - chr1_3:63548762-63548781 Msa0132480:CDS 35.0%
!! TACAGTTTGTTAGGCCTTTA+GGG - chr1_3:63548763-63548782 Msa0132480:CDS 35.0%
CCATCTAAACATAACCCTAA+AGG + chr1_3:63548780-63548799 None:intergenic 35.0%
!! CCTTTAGGGTTATGTTTAGA+TGG - chr1_3:63548777-63548796 Msa0132480:CDS 35.0%
AGGGCAGTTTATGCAAAAAT+TGG - chr1_3:63549176-63549195 Msa0132480:intron 35.0%
GGGCAGTTTATGCAAAAATT+GGG - chr1_3:63549177-63549196 Msa0132480:intron 35.0%
TGCAAAAATTGGGAGAAATG+GGG - chr1_3:63549187-63549206 Msa0132480:intron 35.0%
! TTTTAGCACCTTTTGCTCTT+TGG - chr1_3:63549316-63549335 Msa0132480:CDS 35.0%
TTGCAAATCCAAAGAGCAAA+AGG + chr1_3:63549327-63549346 None:intergenic 35.0%
TGGCTATGTTGTATTGTATC+TGG + chr1_3:63549461-63549480 None:intergenic 35.0%
TACAATACAACATAGCCACA+TGG - chr1_3:63549463-63549482 Msa0132480:five_prime_UTR 35.0%
CAAAATTTGTCATCTGTCAG+TGG + chr1_3:63549543-63549562 None:intergenic 35.0%
! CACTGACAGATGACAAATTT+TGG - chr1_3:63549541-63549560 Msa0132480:five_prime_UTR 35.0%
GAGAAAGACCAAATAAGAAG+AGG + chr1_3:63547775-63547794 None:intergenic 35.0%
AGATCCATCAACAAGAATTG+TGG + chr1_3:63547901-63547920 None:intergenic 35.0%
!! AGCTAGCTGCAATTGTTTTA+TGG + chr1_3:63547980-63547999 None:intergenic 35.0%
!! TCTGGTTCTTGAAAATGTAG+AGG + chr1_3:63548067-63548086 None:intergenic 35.0%
AGTGAAATTGCAGAGATTGA+AGG + chr1_3:63548093-63548112 None:intergenic 35.0%
AGAAAAAACCAACACGAGAA+GGG + chr1_3:63548272-63548291 None:intergenic 35.0%
TAGAAAAAACCAACACGAGA+AGG + chr1_3:63548273-63548292 None:intergenic 35.0%
AATCTTCTCCTTCATTTCCA+TGG - chr1_3:63548436-63548455 Msa0132480:three_prime_UTR 35.0%
!! GGTACTAATGGAAGTGTTAT+TGG + chr1_3:63548522-63548541 None:intergenic 35.0%
CTTCCATTAGTACCATACAA+AGG - chr1_3:63548528-63548547 Msa0132480:three_prime_UTR 35.0%
CTACCTTTGTATGGTACTAA+TGG + chr1_3:63548534-63548553 None:intergenic 35.0%
TTAGTACCATACAAAGGTAG+TGG - chr1_3:63548534-63548553 Msa0132480:three_prime_UTR 35.0%
! AAAGAGTGAGAGAAGAGTAT+GGG + chr1_3:63548669-63548688 None:intergenic 35.0%
! TCCTGAGATTACAGTTTGTT+AGG - chr1_3:63548754-63548773 Msa0132480:CDS 35.0%
!! TTACAGTTTGTTAGGCCTTT+AGG - chr1_3:63548762-63548781 Msa0132480:CDS 35.0%
!! TACAGTTTGTTAGGCCTTTA+GGG - chr1_3:63548763-63548782 Msa0132480:CDS 35.0%
CCATCTAAACATAACCCTAA+AGG + chr1_3:63548780-63548799 None:intergenic 35.0%
!! CCTTTAGGGTTATGTTTAGA+TGG - chr1_3:63548777-63548796 Msa0132480:CDS 35.0%
AGGGCAGTTTATGCAAAAAT+TGG - chr1_3:63549176-63549195 Msa0132480:intron 35.0%
GGGCAGTTTATGCAAAAATT+GGG - chr1_3:63549177-63549196 Msa0132480:intron 35.0%
TGCAAAAATTGGGAGAAATG+GGG - chr1_3:63549187-63549206 Msa0132480:intron 35.0%
! TTTTAGCACCTTTTGCTCTT+TGG - chr1_3:63549316-63549335 Msa0132480:CDS 35.0%
TTGCAAATCCAAAGAGCAAA+AGG + chr1_3:63549327-63549346 None:intergenic 35.0%
TGGCTATGTTGTATTGTATC+TGG + chr1_3:63549461-63549480 None:intergenic 35.0%
TACAATACAACATAGCCACA+TGG - chr1_3:63549463-63549482 Msa0132480:five_prime_UTR 35.0%
CAAAATTTGTCATCTGTCAG+TGG + chr1_3:63549543-63549562 None:intergenic 35.0%
! CACTGACAGATGACAAATTT+TGG - chr1_3:63549541-63549560 Msa0132480:five_prime_UTR 35.0%
TCCATAACTACTCACAGTGA+TGG - chr1_3:63547710-63547729 Msa0132480:three_prime_UTR 40.0%
CCATAACTACTCACAGTGAT+GGG - chr1_3:63547711-63547730 Msa0132480:three_prime_UTR 40.0%
TCCACCACAATTCTTGTTGA+TGG - chr1_3:63547894-63547913 Msa0132480:three_prime_UTR 40.0%
TCCATCAACAAGAATTGTGG+TGG + chr1_3:63547898-63547917 None:intergenic 40.0%
! TTGTTGATGGATCTTCAGAG+TGG - chr1_3:63547907-63547926 Msa0132480:three_prime_UTR 40.0%
AATCACCAATGGAAACAGTG+GGG + chr1_3:63547938-63547957 None:intergenic 40.0%
GAATCACCAATGGAAACAGT+GGG + chr1_3:63547939-63547958 None:intergenic 40.0%
CTTACTGATGGAATCACCAA+TGG + chr1_3:63547949-63547968 None:intergenic 40.0%
TTTGAAGGGCCTTACTGTAT+AGG + chr1_3:63548150-63548169 None:intergenic 40.0%
AGGCCCTTCAAATTTCATCT+TGG - chr1_3:63548158-63548177 Msa0132480:three_prime_UTR 40.0%
TTCTCAGAAGCTAGCCATAA+AGG - chr1_3:63548332-63548351 Msa0132480:three_prime_UTR 40.0%
TGTATATCTCCACCTGAAGA+AGG + chr1_3:63548417-63548436 None:intergenic 40.0%
! GTTATTGGTGAACTTGCTTC+TGG + chr1_3:63548507-63548526 None:intergenic 40.0%
GCAGGGTTACTGTTAATGAA+AGG + chr1_3:63548570-63548589 None:intergenic 40.0%
! TTGATGACCAGAAGTAGCAA+GGG + chr1_3:63548637-63548656 None:intergenic 40.0%
CAAAGAGTGAGAGAAGAGTA+TGG + chr1_3:63548670-63548689 None:intergenic 40.0%
GCCTAACAAACTGTAATCTC+AGG + chr1_3:63548758-63548777 None:intergenic 40.0%
!! TTGGGAGTTGATGTCTATTG+TGG - chr1_3:63549066-63549085 Msa0132480:intron 40.0%
CAGGTGATGATTGGATCATT+TGG - chr1_3:63549096-63549115 Msa0132480:intron 40.0%
AAAATTGGGAGAAATGGGGT+AGG - chr1_3:63549191-63549210 Msa0132480:intron 40.0%
AAATTGGGAGAAATGGGGTA+GGG - chr1_3:63549192-63549211 Msa0132480:intron 40.0%
AATACAACATAGCCACATGG+TGG - chr1_3:63549466-63549485 Msa0132480:five_prime_UTR 40.0%
TCCATAACTACTCACAGTGA+TGG - chr1_3:63547710-63547729 Msa0132480:three_prime_UTR 40.0%
CCATAACTACTCACAGTGAT+GGG - chr1_3:63547711-63547730 Msa0132480:three_prime_UTR 40.0%
TCCACCACAATTCTTGTTGA+TGG - chr1_3:63547894-63547913 Msa0132480:three_prime_UTR 40.0%
TCCATCAACAAGAATTGTGG+TGG + chr1_3:63547898-63547917 None:intergenic 40.0%
! TTGTTGATGGATCTTCAGAG+TGG - chr1_3:63547907-63547926 Msa0132480:three_prime_UTR 40.0%
AATCACCAATGGAAACAGTG+GGG + chr1_3:63547938-63547957 None:intergenic 40.0%
GAATCACCAATGGAAACAGT+GGG + chr1_3:63547939-63547958 None:intergenic 40.0%
CTTACTGATGGAATCACCAA+TGG + chr1_3:63547949-63547968 None:intergenic 40.0%
TTTGAAGGGCCTTACTGTAT+AGG + chr1_3:63548150-63548169 None:intergenic 40.0%
AGGCCCTTCAAATTTCATCT+TGG - chr1_3:63548158-63548177 Msa0132480:three_prime_UTR 40.0%
TTCTCAGAAGCTAGCCATAA+AGG - chr1_3:63548332-63548351 Msa0132480:three_prime_UTR 40.0%
TGTATATCTCCACCTGAAGA+AGG + chr1_3:63548417-63548436 None:intergenic 40.0%
! GTTATTGGTGAACTTGCTTC+TGG + chr1_3:63548507-63548526 None:intergenic 40.0%
GCAGGGTTACTGTTAATGAA+AGG + chr1_3:63548570-63548589 None:intergenic 40.0%
! TTGATGACCAGAAGTAGCAA+GGG + chr1_3:63548637-63548656 None:intergenic 40.0%
CAAAGAGTGAGAGAAGAGTA+TGG + chr1_3:63548670-63548689 None:intergenic 40.0%
GCCTAACAAACTGTAATCTC+AGG + chr1_3:63548758-63548777 None:intergenic 40.0%
!! TTGGGAGTTGATGTCTATTG+TGG - chr1_3:63549066-63549085 Msa0132480:intron 40.0%
CAGGTGATGATTGGATCATT+TGG - chr1_3:63549096-63549115 Msa0132480:intron 40.0%
AAAATTGGGAGAAATGGGGT+AGG - chr1_3:63549191-63549210 Msa0132480:intron 40.0%
AAATTGGGAGAAATGGGGTA+GGG - chr1_3:63549192-63549211 Msa0132480:intron 40.0%
AATACAACATAGCCACATGG+TGG - chr1_3:63549466-63549485 Msa0132480:five_prime_UTR 40.0%
CCCATCACTGTGAGTAGTTA+TGG + chr1_3:63547714-63547733 None:intergenic 45.0%
AAGAACCCCACTGTTTCCAT+TGG - chr1_3:63547930-63547949 Msa0132480:three_prime_UTR 45.0%
GGAATCACCAATGGAAACAG+TGG + chr1_3:63547940-63547959 None:intergenic 45.0%
TGCAGAGATTGAAGGCTTTC+TGG + chr1_3:63548085-63548104 None:intergenic 45.0%
GCTAGGATCAGTGAGAAGAT+TGG + chr1_3:63548120-63548139 None:intergenic 45.0%
ACTGTATAGGAGGTAGTGCT+AGG + chr1_3:63548137-63548156 None:intergenic 45.0%
GCACTACCTCCTATACAGTA+AGG - chr1_3:63548138-63548157 Msa0132480:three_prime_UTR 45.0%
CTTGAGTGAGTCATTGGAGA+AGG + chr1_3:63548301-63548320 None:intergenic 45.0%
CTTCTCCAATGACTCACTCA+AGG - chr1_3:63548299-63548318 Msa0132480:three_prime_UTR 45.0%
ACAAGCCTTGAGTGAGTCAT+TGG + chr1_3:63548307-63548326 None:intergenic 45.0%
!! TCTGGTGCTGAAGCTTTTGT+TGG + chr1_3:63548363-63548382 None:intergenic 45.0%
CGAAATGGCCATGGAAATGA+AGG + chr1_3:63548447-63548466 None:intergenic 45.0%
CCATCACCACTACCTTTGTA+TGG + chr1_3:63548543-63548562 None:intergenic 45.0%
! CCATACAAAGGTAGTGGTGA+TGG - chr1_3:63548540-63548559 Msa0132480:exon 45.0%
TCAACTTCACCAGTAGGTAG+AGG + chr1_3:63548597-63548616 None:intergenic 45.0%
GCAGAATCAACTTCACCAGT+AGG + chr1_3:63548603-63548622 None:intergenic 45.0%
TGATGACCAGAAGTAGCAAG+GGG + chr1_3:63548636-63548655 None:intergenic 45.0%
! CTTGATGACCAGAAGTAGCA+AGG + chr1_3:63548638-63548657 None:intergenic 45.0%
! CTTGCTACTTCTGGTCATCA+AGG - chr1_3:63548636-63548655 Msa0132480:CDS 45.0%
TACTTCTGGTCATCAAGGAC+AGG - chr1_3:63548641-63548660 Msa0132480:CDS 45.0%
TGTCTATTGTGGTTGACTGC+AGG - chr1_3:63549077-63549096 Msa0132480:intron 45.0%
TCATGCTGCTGTGCACATTA+TGG - chr1_3:63549122-63549141 Msa0132480:intron 45.0%
!! GGAGCTTTGAGTCTGAAATC+AGG - chr1_3:63549493-63549512 Msa0132480:five_prime_UTR 45.0%
!!! TCATGCAGTGTTTTAGAGGC+TGG + chr1_3:63549519-63549538 None:intergenic 45.0%
!! TGGGTCATGCAGTGTTTTAG+AGG + chr1_3:63549523-63549542 None:intergenic 45.0%
CCCATCACTGTGAGTAGTTA+TGG + chr1_3:63547714-63547733 None:intergenic 45.0%
AAGAACCCCACTGTTTCCAT+TGG - chr1_3:63547930-63547949 Msa0132480:three_prime_UTR 45.0%
GGAATCACCAATGGAAACAG+TGG + chr1_3:63547940-63547959 None:intergenic 45.0%
TGCAGAGATTGAAGGCTTTC+TGG + chr1_3:63548085-63548104 None:intergenic 45.0%
GCTAGGATCAGTGAGAAGAT+TGG + chr1_3:63548120-63548139 None:intergenic 45.0%
ACTGTATAGGAGGTAGTGCT+AGG + chr1_3:63548137-63548156 None:intergenic 45.0%
GCACTACCTCCTATACAGTA+AGG - chr1_3:63548138-63548157 Msa0132480:three_prime_UTR 45.0%
CTTGAGTGAGTCATTGGAGA+AGG + chr1_3:63548301-63548320 None:intergenic 45.0%
CTTCTCCAATGACTCACTCA+AGG - chr1_3:63548299-63548318 Msa0132480:three_prime_UTR 45.0%
ACAAGCCTTGAGTGAGTCAT+TGG + chr1_3:63548307-63548326 None:intergenic 45.0%
!! TCTGGTGCTGAAGCTTTTGT+TGG + chr1_3:63548363-63548382 None:intergenic 45.0%
CGAAATGGCCATGGAAATGA+AGG + chr1_3:63548447-63548466 None:intergenic 45.0%
CCATCACCACTACCTTTGTA+TGG + chr1_3:63548543-63548562 None:intergenic 45.0%
! CCATACAAAGGTAGTGGTGA+TGG - chr1_3:63548540-63548559 Msa0132480:exon 45.0%
TCAACTTCACCAGTAGGTAG+AGG + chr1_3:63548597-63548616 None:intergenic 45.0%
GCAGAATCAACTTCACCAGT+AGG + chr1_3:63548603-63548622 None:intergenic 45.0%
TGATGACCAGAAGTAGCAAG+GGG + chr1_3:63548636-63548655 None:intergenic 45.0%
! CTTGATGACCAGAAGTAGCA+AGG + chr1_3:63548638-63548657 None:intergenic 45.0%
! CTTGCTACTTCTGGTCATCA+AGG - chr1_3:63548636-63548655 Msa0132480:CDS 45.0%
TACTTCTGGTCATCAAGGAC+AGG - chr1_3:63548641-63548660 Msa0132480:CDS 45.0%
TGTCTATTGTGGTTGACTGC+AGG - chr1_3:63549077-63549096 Msa0132480:intron 45.0%
TCATGCTGCTGTGCACATTA+TGG - chr1_3:63549122-63549141 Msa0132480:intron 45.0%
!! GGAGCTTTGAGTCTGAAATC+AGG - chr1_3:63549493-63549512 Msa0132480:five_prime_UTR 45.0%
!!! TCATGCAGTGTTTTAGAGGC+TGG + chr1_3:63549519-63549538 None:intergenic 45.0%
!! TGGGTCATGCAGTGTTTTAG+AGG + chr1_3:63549523-63549542 None:intergenic 45.0%
!!! TCAATATTTTTTTTTTTTTT+TGG + chr1_3:63549019-63549038 None:intergenic 5.0%
!!! TCAATATTTTTTTTTTTTTT+TGG + chr1_3:63549019-63549038 None:intergenic 5.0%
GAAGGGCCTTACTGTATAGG+AGG + chr1_3:63548147-63548166 None:intergenic 50.0%
!! GGCATTGGTGAAGAAGCTTC+TGG + chr1_3:63548381-63548400 None:intergenic 50.0%
TCACCAATGCCAACTACTCC+AGG - chr1_3:63548390-63548409 Msa0132480:three_prime_UTR 50.0%
GAAGAAGGACCTGGAGTAGT+TGG + chr1_3:63548402-63548421 None:intergenic 50.0%
ACTACTCCAGGTCCTTCTTC+AGG - chr1_3:63548402-63548421 Msa0132480:three_prime_UTR 50.0%
GAACCTTGGTGAGGACGAAA+TGG + chr1_3:63548462-63548481 None:intergenic 50.0%
! GGTGAACTTGCTTCTGGTGT+TGG + chr1_3:63548501-63548520 None:intergenic 50.0%
CAGTAGGTAGAGGAACTGCA+GGG + chr1_3:63548587-63548606 None:intergenic 50.0%
! ATACACCCCCTTGCTACTTC+TGG - chr1_3:63548627-63548646 Msa0132480:CDS 50.0%
GATGACCAGAAGTAGCAAGG+GGG + chr1_3:63548635-63548654 None:intergenic 50.0%
GGTTGACTGCAGGTGATGAT+TGG - chr1_3:63549087-63549106 Msa0132480:intron 50.0%
ACAACATAGCCACATGGTGG+TGG - chr1_3:63549469-63549488 Msa0132480:five_prime_UTR 50.0%
CAACATAGCCACATGGTGGT+GGG - chr1_3:63549470-63549489 Msa0132480:five_prime_UTR 50.0%
! AACATAGCCACATGGTGGTG+GGG - chr1_3:63549471-63549490 Msa0132480:five_prime_UTR 50.0%
GAAGGGCCTTACTGTATAGG+AGG + chr1_3:63548147-63548166 None:intergenic 50.0%
!! GGCATTGGTGAAGAAGCTTC+TGG + chr1_3:63548381-63548400 None:intergenic 50.0%
TCACCAATGCCAACTACTCC+AGG - chr1_3:63548390-63548409 Msa0132480:three_prime_UTR 50.0%
GAAGAAGGACCTGGAGTAGT+TGG + chr1_3:63548402-63548421 None:intergenic 50.0%
ACTACTCCAGGTCCTTCTTC+AGG - chr1_3:63548402-63548421 Msa0132480:three_prime_UTR 50.0%
GAACCTTGGTGAGGACGAAA+TGG + chr1_3:63548462-63548481 None:intergenic 50.0%
! GGTGAACTTGCTTCTGGTGT+TGG + chr1_3:63548501-63548520 None:intergenic 50.0%
CAGTAGGTAGAGGAACTGCA+GGG + chr1_3:63548587-63548606 None:intergenic 50.0%
! ATACACCCCCTTGCTACTTC+TGG - chr1_3:63548627-63548646 Msa0132480:CDS 50.0%
GATGACCAGAAGTAGCAAGG+GGG + chr1_3:63548635-63548654 None:intergenic 50.0%
GGTTGACTGCAGGTGATGAT+TGG - chr1_3:63549087-63549106 Msa0132480:intron 50.0%
ACAACATAGCCACATGGTGG+TGG - chr1_3:63549469-63549488 Msa0132480:five_prime_UTR 50.0%
CAACATAGCCACATGGTGGT+GGG - chr1_3:63549470-63549489 Msa0132480:five_prime_UTR 50.0%
! AACATAGCCACATGGTGGTG+GGG - chr1_3:63549471-63549490 Msa0132480:five_prime_UTR 50.0%
GGACCTGGAGTAGTTGGCAT+TGG + chr1_3:63548396-63548415 None:intergenic 55.0%
ACTCCAGGTCCTTCTTCAGG+TGG - chr1_3:63548405-63548424 Msa0132480:three_prime_UTR 55.0%
TCTCCACCTGAAGAAGGACC+TGG + chr1_3:63548411-63548430 None:intergenic 55.0%
TGGTGAGGACGAAATGGCCA+TGG + chr1_3:63548456-63548475 None:intergenic 55.0%
TGGCCATTTCGTCCTCACCA+AGG - chr1_3:63548456-63548475 Msa0132480:three_prime_UTR 55.0%
CCTGGTGAAGAACCTTGGTG+AGG + chr1_3:63548471-63548490 None:intergenic 55.0%
CCTCACCAAGGTTCTTCACC+AGG - chr1_3:63548468-63548487 Msa0132480:three_prime_UTR 55.0%
CTGGACCTGGTGAAGAACCT+TGG + chr1_3:63548476-63548495 None:intergenic 55.0%
!! CTTGCTTCTGGTGTTGGTGC+TGG + chr1_3:63548495-63548514 None:intergenic 55.0%
CCAGTAGGTAGAGGAACTGC+AGG + chr1_3:63548588-63548607 None:intergenic 55.0%
CCTGCAGTTCCTCTACCTAC+TGG - chr1_3:63548585-63548604 Msa0132480:CDS 55.0%
TGGGAGAAATGGGGTAGGGA+TGG - chr1_3:63549196-63549215 Msa0132480:intron 55.0%
!! ACATAGCCACATGGTGGTGG+GGG - chr1_3:63549472-63549491 Msa0132480:five_prime_UTR 55.0%
GGACCTGGAGTAGTTGGCAT+TGG + chr1_3:63548396-63548415 None:intergenic 55.0%
ACTCCAGGTCCTTCTTCAGG+TGG - chr1_3:63548405-63548424 Msa0132480:three_prime_UTR 55.0%
TCTCCACCTGAAGAAGGACC+TGG + chr1_3:63548411-63548430 None:intergenic 55.0%
TGGTGAGGACGAAATGGCCA+TGG + chr1_3:63548456-63548475 None:intergenic 55.0%
TGGCCATTTCGTCCTCACCA+AGG - chr1_3:63548456-63548475 Msa0132480:three_prime_UTR 55.0%
CCTGGTGAAGAACCTTGGTG+AGG + chr1_3:63548471-63548490 None:intergenic 55.0%
CCTCACCAAGGTTCTTCACC+AGG - chr1_3:63548468-63548487 Msa0132480:three_prime_UTR 55.0%
CTGGACCTGGTGAAGAACCT+TGG + chr1_3:63548476-63548495 None:intergenic 55.0%
!! CTTGCTTCTGGTGTTGGTGC+TGG + chr1_3:63548495-63548514 None:intergenic 55.0%
CCAGTAGGTAGAGGAACTGC+AGG + chr1_3:63548588-63548607 None:intergenic 55.0%
CCTGCAGTTCCTCTACCTAC+TGG - chr1_3:63548585-63548604 Msa0132480:CDS 55.0%
TGGGAGAAATGGGGTAGGGA+TGG - chr1_3:63549196-63549215 Msa0132480:intron 55.0%
!! ACATAGCCACATGGTGGTGG+GGG - chr1_3:63549472-63549491 Msa0132480:five_prime_UTR 55.0%
CAGTGGCACCCTTCTCGTGT+TGG - chr1_3:63548261-63548280 Msa0132480:three_prime_UTR 60.0%
!! TCTGGTGTTGGTGCTGGACC+TGG + chr1_3:63548489-63548508 None:intergenic 60.0%
AAAGCTCCCCCACCACCATG+TGG + chr1_3:63549481-63549500 None:intergenic 60.0%
CAGTGGCACCCTTCTCGTGT+TGG - chr1_3:63548261-63548280 Msa0132480:three_prime_UTR 60.0%
!! TCTGGTGTTGGTGCTGGACC+TGG + chr1_3:63548489-63548508 None:intergenic 60.0%
AAAGCTCCCCCACCACCATG+TGG + chr1_3:63549481-63549500 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 63547673 63549580 63547673 ID=Msa0132480;Name=Msa0132480
chr1_3 mRNA 63547673 63549580 63547673 ID=Msa0132480-mRNA-1;Parent=Msa0132480;Name=Msa0132480-mRNA-1;_AED=0.11;_eAED=0.11;_QI=240|0|1|1|1|1|2|882|161
chr1_3 exon 63547673 63548989 63547673 ID=Msa0132480-mRNA-1:exon:21298;Parent=Msa0132480-mRNA-1
chr1_3 exon 63549290 63549580 63549290 ID=Msa0132480-mRNA-1:exon:21297;Parent=Msa0132480-mRNA-1
chr1_3 five_prime_UTR 63549341 63549580 63549341 ID=Msa0132480-mRNA-1:five_prime_utr;Parent=Msa0132480-mRNA-1
chr1_3 CDS 63549290 63549340 63549290 ID=Msa0132480-mRNA-1:cds;Parent=Msa0132480-mRNA-1
chr1_3 CDS 63548555 63548989 63548555 ID=Msa0132480-mRNA-1:cds;Parent=Msa0132480-mRNA-1
chr1_3 three_prime_UTR 63547673 63548554 63547673 ID=Msa0132480-mRNA-1:three_prime_utr;Parent=Msa0132480-mRNA-1
Gene Sequence

>Msa0132480

ATGGATCTTCAGAGTGGAAGAACCCCACTGTTTCCATTGGTGATTCCATCATGGCACCCTTCTCGTGTTGGTTTTTTCTACTTCACCTTCTCCAATGACTCACTCAAGGCTTGTCAAGATTCTCAGAAGCTAGCCATAAAGGTAACTCCAACAAAAGCTTCAGCACCAGAAGCTTCTTCACCAATGCCAACTACTCCAGGTCCTTCTTCAGGTGGAGATATACAATCTTCTCCTTCATTTCCATGGCCATTTCGTCCTCACCAAGGTTCTTCACCAGGTCCAGCACCAACACCAGAAGCAAGTTCACCAATAACACTTCCATTAGTACCATACAAAGGTAGTGGTGATGGCATGCCTTTCATTAACAGTAACCCTGCAGTTCCTCTACCTACTGGTGAAGTTGATTCTGCTACTATACACCCCCTTGCTACTTCTGGTCATCAAGGACAGGTTCCCATACTCTTCTCTCACTCTTTGCTTTTCTAA
Protein sequence

>Msa0132480

MDLQSGRTPLFPLVIPSWHPSRVGFFYFTFSNDSLKACQDSQKLAIKVTPTKASAPEASSPMPTTPGPSSGGDIQSSPSFPWPFRPHQGSSPGPAPTPEASSPITLPLVPYKGSGDGMPFINSNPAVPLPTGEVDSATIHPLATSGHQGQVPILFSHSLLF*