Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0142920 | sp|Q9S775|PKL_ARATH | 59.956 | 1356 | 444 | 22 | 1 | 1283 | 1 | 1330 | 0.0 | 1555 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0142920 | A0A072VDM6 | 88.073 | 1308 | 116 | 6 | 1 | 1274 | 1 | 1302 | 0.0 | 2310 |
Gene ID | Type | Classification |
---|---|---|
Msa0142920 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0142920 | Msa1359440 | 0.984401 | 1.873674e-160 | -8.615850e-47 |
Msa0142920 | Msa1399010 | 0.981912 | 9.288259e-154 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0142920 | MtrunA17_Chr3g0137091 | 68.355 | 1362 | 341 | 17 | 1 | 1282 | 1 | 1352 | 0.0 | 1810 |
Msa0142920 | MtrunA17_Chr1g0149861 | 78.559 | 555 | 54 | 5 | 712 | 1206 | 1 | 550 | 0.0 | 843 |
Msa0142920 | MtrunA17_Chr1g0149871 | 87.697 | 317 | 34 | 2 | 50 | 362 | 8 | 323 | 0.0 | 580 |
Msa0142920 | MtrunA17_Chr5g0442141 | 43.416 | 767 | 353 | 23 | 129 | 851 | 456 | 1185 | 1.20e-176 | 568 |
Msa0142920 | MtrunA17_Chr3g0095091 | 35.496 | 1048 | 527 | 30 | 110 | 1074 | 390 | 1371 | 1.33e-173 | 560 |
Msa0142920 | MtrunA17_Chr4g0052341 | 40.462 | 823 | 383 | 15 | 129 | 875 | 604 | 1395 | 2.05e-173 | 568 |
Msa0142920 | MtrunA17_Chr4g0066741 | 43.358 | 542 | 261 | 9 | 281 | 813 | 186 | 690 | 1.34e-130 | 428 |
Msa0142920 | MtrunA17_Chr2g0286291 | 43.542 | 542 | 260 | 9 | 281 | 813 | 189 | 693 | 1.17e-123 | 409 |
Msa0142920 | MtrunA17_Chr5g0403921 | 39.539 | 607 | 300 | 14 | 246 | 815 | 148 | 724 | 1.57e-116 | 381 |
Msa0142920 | MtrunA17_Chr5g0394201 | 37.908 | 612 | 304 | 12 | 261 | 826 | 333 | 914 | 1.19e-113 | 382 |
Msa0142920 | MtrunA17_Chr1g0205891 | 40.182 | 550 | 273 | 10 | 260 | 780 | 345 | 867 | 1.04e-112 | 380 |
Msa0142920 | MtrunA17_Chr4g0066651 | 40.837 | 502 | 236 | 10 | 275 | 747 | 981 | 1450 | 4.58e-102 | 359 |
Msa0142920 | MtrunA17_Chr7g0232121 | 36.256 | 593 | 309 | 14 | 283 | 828 | 39 | 609 | 5.67e-101 | 342 |
Msa0142920 | MtrunA17_Chr7g0231521 | 33.913 | 575 | 268 | 14 | 283 | 828 | 39 | 530 | 3.69e-88 | 304 |
Msa0142920 | MtrunA17_Chr8g0348721 | 36.511 | 493 | 241 | 7 | 275 | 729 | 979 | 1437 | 2.75e-83 | 301 |
Msa0142920 | MtrunA17_Chr1g0163011 | 35.519 | 549 | 252 | 14 | 283 | 754 | 195 | 718 | 2.31e-82 | 286 |
Msa0142920 | MtrunA17_Chr7g0248031 | 37.090 | 488 | 246 | 7 | 275 | 729 | 986 | 1445 | 4.32e-80 | 291 |
Msa0142920 | MtrunA17_Chr1g0183681 | 34.686 | 542 | 296 | 14 | 267 | 766 | 366 | 891 | 1.65e-78 | 283 |
Msa0142920 | MtrunA17_Chr4g0017211 | 30.957 | 575 | 296 | 13 | 283 | 788 | 1450 | 1992 | 6.26e-66 | 246 |
Msa0142920 | MtrunA17_Chr8g0384531 | 31.489 | 524 | 258 | 15 | 283 | 739 | 384 | 873 | 1.29e-60 | 227 |
Msa0142920 | MtrunA17_Chr7g0257101 | 38.138 | 333 | 169 | 9 | 274 | 587 | 570 | 884 | 3.85e-56 | 214 |
Msa0142920 | MtrunA17_Chr7g0257101 | 48.718 | 156 | 79 | 1 | 599 | 754 | 1186 | 1340 | 4.11e-38 | 156 |
Msa0142920 | MtrunA17_Chr1g0175191 | 38.509 | 322 | 161 | 5 | 277 | 585 | 515 | 812 | 2.10e-54 | 209 |
Msa0142920 | MtrunA17_Chr1g0175191 | 50.000 | 156 | 77 | 1 | 605 | 760 | 1062 | 1216 | 1.84e-38 | 157 |
Msa0142920 | MtrunA17_Chr5g0393461 | 25.665 | 639 | 386 | 16 | 283 | 853 | 184 | 801 | 2.00e-53 | 203 |
Msa0142920 | MtrunA17_Chr7g0264371 | 25.505 | 792 | 456 | 27 | 54 | 791 | 49 | 760 | 8.23e-49 | 191 |
Msa0142920 | MtrunA17_Chr4g0069451 | 26.778 | 478 | 299 | 14 | 282 | 747 | 173 | 611 | 1.61e-34 | 142 |
Msa0142920 | MtrunA17_Chr2g0296421 | 25.743 | 505 | 324 | 14 | 280 | 749 | 508 | 996 | 7.13e-31 | 132 |
Msa0142920 | MtrunA17_Chr4g0040301 | 37.968 | 187 | 110 | 2 | 602 | 783 | 377 | 562 | 3.47e-30 | 129 |
Msa0142920 | MtrunA17_Chr4g0040301 | 29.851 | 268 | 132 | 7 | 311 | 549 | 18 | 258 | 1.69e-23 | 107 |
Msa0142920 | MtrunA17_Chr8g0352361 | 24.864 | 551 | 351 | 18 | 226 | 737 | 309 | 835 | 4.22e-29 | 126 |
Msa0142920 | MtrunA17_Chr7g0232971 | 25.953 | 551 | 277 | 20 | 283 | 737 | 720 | 1235 | 9.06e-29 | 125 |
Msa0142920 | MtrunA17_Chr7g0233021 | 23.792 | 559 | 327 | 16 | 282 | 760 | 654 | 1193 | 9.90e-29 | 125 |
Msa0142920 | MtrunA17_Chr7g0233031 | 25.042 | 591 | 307 | 21 | 282 | 772 | 674 | 1228 | 1.06e-28 | 125 |
Msa0142920 | MtrunA17_Chr1g0190381 | 30.769 | 364 | 168 | 11 | 490 | 776 | 18 | 374 | 3.11e-27 | 118 |
Msa0142920 | MtrunA17_Chr7g0225791 | 23.689 | 553 | 334 | 16 | 283 | 764 | 716 | 1251 | 7.86e-26 | 115 |
Msa0142920 | MtrunA17_Chr4g0047081 | 24.205 | 566 | 309 | 20 | 282 | 760 | 665 | 1197 | 2.91e-24 | 110 |
Msa0142920 | MtrunA17_Chr1g0191141 | 25.562 | 489 | 304 | 13 | 305 | 737 | 557 | 1041 | 1.78e-23 | 108 |
Msa0142920 | MtrunA17_Chr7g0224051 | 25.813 | 492 | 300 | 17 | 305 | 737 | 570 | 1055 | 4.07e-23 | 107 |
Msa0142920 | MtrunA17_Chr7g0233001 | 22.954 | 562 | 306 | 21 | 319 | 807 | 1 | 508 | 1.29e-22 | 103 |
Msa0142920 | MtrunA17_Chr3g0114161 | 25.046 | 547 | 328 | 22 | 260 | 737 | 653 | 1186 | 2.91e-22 | 104 |
Msa0142920 | MtrunA17_Chr2g0320751 | 33.529 | 170 | 110 | 3 | 598 | 766 | 844 | 1011 | 4.18e-22 | 103 |
Msa0142920 | MtrunA17_Chr2g0320751 | 24.727 | 275 | 156 | 8 | 333 | 583 | 479 | 726 | 3.22e-18 | 90.9 |
Msa0142920 | MtrunA17_Chr1g0168031 | 34.694 | 147 | 95 | 1 | 600 | 746 | 982 | 1127 | 9.57e-21 | 99.4 |
Msa0142920 | MtrunA17_Chr1g0168031 | 25.228 | 329 | 169 | 10 | 305 | 583 | 536 | 837 | 2.18e-19 | 95.1 |
Msa0142920 | MtrunA17_Chr5g0437621 | 24.739 | 574 | 338 | 21 | 282 | 771 | 718 | 1281 | 2.76e-20 | 97.8 |
Msa0142920 | MtrunA17_Chr6g0457751 | 97.368 | 38 | 1 | 0 | 332 | 369 | 15 | 52 | 3.91e-20 | 85.5 |
Msa0142920 | MtrunA17_Chr2g0281601 | 33.333 | 153 | 100 | 2 | 621 | 772 | 1148 | 1299 | 5.81e-20 | 97.1 |
Msa0142920 | MtrunA17_Chr2g0281601 | 22.259 | 301 | 174 | 9 | 334 | 584 | 665 | 955 | 2.93e-12 | 71.6 |
Msa0142920 | MtrunA17_Chr7g0255821 | 33.526 | 173 | 111 | 3 | 601 | 769 | 644 | 816 | 1.04e-19 | 95.5 |
Msa0142920 | MtrunA17_Chr7g0255821 | 24.390 | 369 | 212 | 11 | 254 | 583 | 194 | 534 | 3.57e-17 | 87.4 |
Msa0142920 | MtrunA17_Chr7g0232991 | 24.130 | 431 | 257 | 13 | 429 | 826 | 272 | 665 | 7.93e-19 | 92.4 |
Msa0142920 | MtrunA17_Chr1g0212331 | 37.500 | 128 | 77 | 2 | 623 | 748 | 887 | 1013 | 4.08e-18 | 90.9 |
Msa0142920 | MtrunA17_Chr1g0212331 | 23.602 | 322 | 196 | 11 | 327 | 600 | 398 | 717 | 2.58e-13 | 75.1 |
Msa0142920 | MtrunA17_Chr4g0024921 | 29.936 | 157 | 107 | 3 | 614 | 769 | 775 | 929 | 5.30e-16 | 83.6 |
Msa0142920 | MtrunA17_Chr4g0039561 | 38.393 | 112 | 54 | 2 | 560 | 664 | 42 | 145 | 3.69e-15 | 75.5 |
Msa0142920 | MtrunA17_Chr2g0326991 | 29.078 | 141 | 93 | 2 | 612 | 750 | 25 | 160 | 1.71e-13 | 75.9 |
Msa0142920 | MtrunA17_Chr2g0320781 | 32.500 | 120 | 76 | 1 | 623 | 737 | 111 | 230 | 2.52e-12 | 68.6 |
Msa0142920 | MtrunA17_Chr5g0428401 | 26.437 | 174 | 110 | 5 | 606 | 766 | 1476 | 1644 | 4.03e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0142920 | AT2G25170.1 | 59.956 | 1356 | 444 | 22 | 1 | 1283 | 1 | 1330 | 0.0 | 1555 |
Msa0142920 | AT2G25170.2 | 59.956 | 1356 | 444 | 22 | 1 | 1283 | 18 | 1347 | 0.0 | 1555 |
Msa0142920 | AT2G25170.4 | 59.956 | 1356 | 444 | 22 | 1 | 1283 | 1 | 1330 | 0.0 | 1555 |
Msa0142920 | AT2G25170.3 | 59.956 | 1356 | 444 | 22 | 1 | 1283 | 27 | 1356 | 0.0 | 1555 |
Msa0142920 | AT4G31900.3 | 54.190 | 1050 | 370 | 20 | 98 | 1081 | 43 | 1047 | 0.0 | 1086 |
Msa0142920 | AT4G31900.1 | 53.686 | 1058 | 371 | 20 | 98 | 1081 | 43 | 1055 | 0.0 | 1084 |
Msa0142920 | AT4G31900.2 | 54.292 | 967 | 333 | 15 | 180 | 1081 | 92 | 1014 | 0.0 | 1021 |
Msa0142920 | AT2G13370.1 | 36.381 | 1050 | 512 | 33 | 111 | 1074 | 445 | 1424 | 0.0 | 585 |
Msa0142920 | AT2G13370.2 | 36.381 | 1050 | 512 | 33 | 111 | 1074 | 445 | 1424 | 0.0 | 585 |
Msa0142920 | AT2G13370.3 | 36.381 | 1050 | 512 | 33 | 111 | 1074 | 445 | 1424 | 0.0 | 585 |
Msa0142920 | AT5G44800.1 | 40.767 | 861 | 380 | 23 | 124 | 901 | 548 | 1361 | 3.21e-169 | 556 |
Msa0142920 | AT5G18620.1 | 43.358 | 542 | 261 | 9 | 281 | 813 | 192 | 696 | 7.29e-123 | 408 |
Msa0142920 | AT5G18620.2 | 43.358 | 542 | 261 | 9 | 281 | 813 | 192 | 696 | 8.41e-123 | 407 |
Msa0142920 | AT3G06400.1 | 43.358 | 542 | 261 | 9 | 281 | 813 | 187 | 691 | 1.26e-122 | 407 |
Msa0142920 | AT3G06400.3 | 43.358 | 542 | 261 | 9 | 281 | 813 | 187 | 691 | 1.34e-122 | 407 |
Msa0142920 | AT3G06400.2 | 43.358 | 542 | 261 | 9 | 281 | 813 | 187 | 691 | 1.39e-122 | 407 |
Msa0142920 | AT5G19310.2 | 40.437 | 549 | 270 | 8 | 261 | 780 | 92 | 612 | 1.02e-118 | 389 |
Msa0142920 | AT5G19310.1 | 40.437 | 549 | 270 | 8 | 261 | 780 | 356 | 876 | 5.53e-116 | 389 |
Msa0142920 | AT3G06010.1 | 39.636 | 550 | 276 | 8 | 260 | 780 | 372 | 894 | 1.29e-113 | 383 |
Msa0142920 | AT5G66750.1 | 39.024 | 615 | 298 | 16 | 240 | 813 | 160 | 738 | 6.09e-109 | 361 |
Msa0142920 | AT2G44980.3 | 38.123 | 522 | 273 | 9 | 276 | 767 | 44 | 545 | 6.11e-101 | 342 |
Msa0142920 | AT2G44980.1 | 37.244 | 537 | 280 | 11 | 276 | 783 | 44 | 552 | 5.21e-100 | 339 |
Msa0142920 | AT2G28290.1 | 35.948 | 612 | 304 | 11 | 221 | 776 | 671 | 1250 | 7.91e-100 | 353 |
Msa0142920 | AT2G28290.5 | 35.948 | 612 | 304 | 11 | 221 | 776 | 672 | 1251 | 7.91e-100 | 353 |
Msa0142920 | AT2G28290.3 | 35.948 | 612 | 304 | 11 | 221 | 776 | 671 | 1250 | 9.79e-100 | 353 |
Msa0142920 | AT2G28290.4 | 35.948 | 612 | 304 | 11 | 221 | 776 | 671 | 1250 | 9.79e-100 | 353 |
Msa0142920 | AT2G28290.6 | 35.948 | 612 | 304 | 11 | 221 | 776 | 672 | 1251 | 9.97e-100 | 353 |
Msa0142920 | AT2G28290.2 | 35.948 | 612 | 304 | 11 | 221 | 776 | 671 | 1250 | 1.15e-99 | 352 |
Msa0142920 | AT2G44980.2 | 36.996 | 546 | 288 | 11 | 276 | 783 | 44 | 571 | 1.33e-98 | 336 |
Msa0142920 | AT2G46020.2 | 34.753 | 587 | 293 | 11 | 238 | 791 | 938 | 1467 | 3.39e-82 | 298 |
Msa0142920 | AT2G46020.3 | 34.753 | 587 | 293 | 11 | 238 | 791 | 938 | 1467 | 3.39e-82 | 298 |
Msa0142920 | AT2G46020.4 | 34.753 | 587 | 293 | 11 | 238 | 791 | 938 | 1467 | 3.39e-82 | 298 |
Msa0142920 | AT2G02090.1 | 35.413 | 545 | 258 | 13 | 283 | 754 | 213 | 736 | 5.77e-82 | 286 |
Msa0142920 | AT2G46020.5 | 35.094 | 587 | 290 | 12 | 238 | 791 | 938 | 1466 | 1.46e-81 | 296 |
Msa0142920 | AT2G46020.1 | 35.094 | 587 | 290 | 12 | 238 | 791 | 938 | 1466 | 1.46e-81 | 296 |
Msa0142920 | AT2G46020.6 | 35.094 | 587 | 290 | 12 | 238 | 791 | 938 | 1466 | 1.46e-81 | 296 |
Msa0142920 | AT2G18760.4 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.1 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.2 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.7 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.5 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.6 | 35.294 | 510 | 289 | 12 | 282 | 763 | 384 | 880 | 3.84e-77 | 279 |
Msa0142920 | AT2G18760.3 | 35.294 | 510 | 289 | 12 | 282 | 763 | 443 | 939 | 7.05e-77 | 279 |
Msa0142920 | AT3G54280.2 | 29.360 | 688 | 367 | 18 | 213 | 810 | 1406 | 2064 | 4.76e-67 | 250 |
Msa0142920 | AT3G54280.1 | 29.360 | 688 | 367 | 18 | 213 | 810 | 1375 | 2033 | 6.54e-67 | 250 |
Msa0142920 | AT5G63950.1 | 32.184 | 522 | 256 | 15 | 283 | 739 | 377 | 865 | 5.26e-64 | 238 |
Msa0142920 | AT5G63950.2 | 32.157 | 510 | 255 | 16 | 283 | 739 | 377 | 848 | 1.54e-60 | 227 |
Msa0142920 | AT3G19210.3 | 26.773 | 564 | 321 | 14 | 283 | 784 | 180 | 713 | 1.45e-55 | 208 |
Msa0142920 | AT3G19210.1 | 26.773 | 564 | 321 | 14 | 283 | 784 | 180 | 713 | 4.44e-55 | 209 |
Msa0142920 | AT3G12810.1 | 38.820 | 322 | 160 | 5 | 277 | 585 | 530 | 827 | 4.94e-55 | 212 |
Msa0142920 | AT3G12810.1 | 41.841 | 239 | 127 | 5 | 605 | 841 | 1075 | 1303 | 2.92e-39 | 160 |
Msa0142920 | AT3G12810.2 | 38.820 | 322 | 160 | 5 | 277 | 585 | 526 | 823 | 5.10e-55 | 211 |
Msa0142920 | AT3G12810.2 | 41.841 | 239 | 127 | 5 | 605 | 841 | 1071 | 1299 | 2.87e-39 | 160 |
Msa0142920 | AT3G57300.1 | 37.764 | 331 | 169 | 8 | 273 | 584 | 577 | 889 | 6.30e-55 | 211 |
Msa0142920 | AT3G57300.1 | 48.718 | 156 | 79 | 1 | 599 | 754 | 1200 | 1354 | 6.76e-38 | 155 |
Msa0142920 | AT3G57300.4 | 37.764 | 331 | 169 | 8 | 273 | 584 | 577 | 889 | 6.30e-55 | 211 |
Msa0142920 | AT3G57300.4 | 48.718 | 156 | 79 | 1 | 599 | 754 | 1200 | 1354 | 6.76e-38 | 155 |
Msa0142920 | AT3G57300.3 | 37.879 | 330 | 168 | 8 | 274 | 584 | 578 | 889 | 9.28e-55 | 210 |
Msa0142920 | AT3G19210.2 | 26.821 | 563 | 320 | 14 | 283 | 784 | 180 | 711 | 1.54e-54 | 207 |
Msa0142920 | AT3G57300.2 | 35.795 | 352 | 180 | 10 | 273 | 584 | 577 | 922 | 3.64e-52 | 202 |
Msa0142920 | AT3G57300.2 | 48.718 | 156 | 79 | 1 | 599 | 754 | 1233 | 1387 | 8.96e-38 | 155 |
Msa0142920 | AT1G48310.1 | 27.859 | 481 | 290 | 15 | 282 | 747 | 171 | 609 | 2.21e-38 | 154 |
Msa0142920 | AT1G48310.3 | 27.859 | 481 | 290 | 15 | 282 | 747 | 171 | 609 | 2.48e-38 | 154 |
Msa0142920 | AT1G48310.2 | 27.859 | 481 | 290 | 15 | 282 | 747 | 176 | 614 | 2.70e-38 | 154 |
Msa0142920 | AT1G02670.7 | 24.513 | 616 | 352 | 16 | 244 | 779 | 85 | 667 | 1.72e-32 | 136 |
Msa0142920 | AT1G02670.1 | 24.513 | 616 | 352 | 16 | 244 | 779 | 96 | 678 | 2.17e-32 | 135 |
Msa0142920 | AT1G03750.1 | 31.757 | 296 | 148 | 6 | 282 | 549 | 138 | 407 | 3.04e-32 | 136 |
Msa0142920 | AT1G03750.1 | 38.043 | 184 | 108 | 2 | 605 | 783 | 528 | 710 | 4.58e-30 | 129 |
Msa0142920 | AT1G02670.6 | 24.138 | 638 | 350 | 16 | 244 | 779 | 58 | 663 | 3.52e-32 | 135 |
Msa0142920 | AT1G02670.3 | 24.138 | 638 | 350 | 16 | 244 | 779 | 85 | 690 | 4.04e-32 | 135 |
Msa0142920 | AT3G24340.1 | 25.806 | 496 | 317 | 17 | 283 | 736 | 577 | 1063 | 1.73e-29 | 128 |
Msa0142920 | AT2G21450.2 | 25.281 | 534 | 303 | 16 | 282 | 748 | 271 | 775 | 1.65e-27 | 121 |
Msa0142920 | AT2G21450.3 | 25.281 | 534 | 303 | 16 | 282 | 748 | 173 | 677 | 1.72e-27 | 120 |
Msa0142920 | AT1G08600.1 | 41.799 | 189 | 94 | 6 | 593 | 766 | 1083 | 1270 | 1.75e-27 | 122 |
Msa0142920 | AT1G08600.1 | 28.013 | 307 | 146 | 12 | 281 | 549 | 717 | 986 | 9.96e-22 | 103 |
Msa0142920 | AT2G21450.1 | 25.281 | 534 | 303 | 16 | 282 | 748 | 264 | 768 | 2.10e-27 | 120 |
Msa0142920 | AT1G08600.4 | 41.799 | 189 | 94 | 6 | 593 | 766 | 1104 | 1291 | 2.11e-27 | 121 |
Msa0142920 | AT1G08600.4 | 28.479 | 309 | 163 | 12 | 281 | 549 | 717 | 1007 | 1.57e-19 | 95.9 |
Msa0142920 | AT1G08600.3 | 41.799 | 189 | 94 | 6 | 593 | 766 | 1104 | 1291 | 2.11e-27 | 121 |
Msa0142920 | AT1G08600.3 | 28.479 | 309 | 163 | 12 | 281 | 549 | 717 | 1007 | 1.57e-19 | 95.9 |
Msa0142920 | AT1G08600.2 | 41.799 | 189 | 94 | 6 | 593 | 766 | 1104 | 1291 | 2.11e-27 | 121 |
Msa0142920 | AT1G08600.2 | 28.479 | 309 | 163 | 12 | 281 | 549 | 717 | 1007 | 1.57e-19 | 95.9 |
Msa0142920 | AT1G02670.5 | 23.379 | 586 | 319 | 15 | 244 | 727 | 58 | 615 | 3.15e-26 | 116 |
Msa0142920 | AT1G02670.2 | 23.379 | 586 | 319 | 15 | 244 | 727 | 85 | 642 | 4.85e-26 | 115 |
Msa0142920 | AT2G16390.2 | 25.237 | 527 | 306 | 17 | 280 | 749 | 350 | 845 | 9.88e-25 | 112 |
Msa0142920 | AT2G16390.1 | 25.237 | 527 | 306 | 17 | 280 | 749 | 347 | 842 | 1.36e-24 | 112 |
Msa0142920 | AT5G22750.1 | 34.706 | 170 | 108 | 3 | 598 | 766 | 857 | 1024 | 3.69e-23 | 107 |
Msa0142920 | AT5G22750.1 | 25.000 | 344 | 173 | 10 | 305 | 583 | 416 | 739 | 2.18e-21 | 101 |
Msa0142920 | AT3G42670.2 | 25.599 | 543 | 309 | 20 | 305 | 771 | 709 | 1232 | 4.60e-21 | 100 |
Msa0142920 | AT3G42670.3 | 25.599 | 543 | 309 | 20 | 305 | 771 | 709 | 1232 | 4.60e-21 | 100 |
Msa0142920 | AT3G42670.1 | 25.599 | 543 | 309 | 20 | 305 | 771 | 709 | 1232 | 4.60e-21 | 100 |
Msa0142920 | AT3G42670.4 | 25.599 | 543 | 309 | 20 | 305 | 771 | 711 | 1234 | 4.80e-21 | 100 |
Msa0142920 | AT5G43530.1 | 32.164 | 171 | 112 | 3 | 604 | 771 | 1108 | 1277 | 8.62e-21 | 100 |
Msa0142920 | AT5G43530.1 | 24.251 | 334 | 169 | 12 | 305 | 583 | 684 | 988 | 1.46e-17 | 89.4 |
Msa0142920 | AT1G61140.3 | 32.237 | 152 | 102 | 1 | 615 | 766 | 959 | 1109 | 1.29e-20 | 99.4 |
Msa0142920 | AT1G61140.3 | 21.212 | 297 | 193 | 7 | 330 | 585 | 506 | 802 | 2.58e-12 | 72.4 |
Msa0142920 | AT1G61140.1 | 32.237 | 152 | 102 | 1 | 615 | 766 | 1117 | 1267 | 1.64e-20 | 99.4 |
Msa0142920 | AT1G61140.1 | 21.212 | 297 | 193 | 7 | 330 | 585 | 664 | 960 | 1.69e-12 | 72.8 |
Msa0142920 | AT1G05490.1 | 25.000 | 340 | 211 | 10 | 429 | 736 | 1008 | 1335 | 7.08e-20 | 97.1 |
Msa0142920 | AT5G05130.1 | 35.152 | 165 | 104 | 3 | 609 | 770 | 712 | 876 | 1.25e-19 | 95.9 |
Msa0142920 | AT5G05130.1 | 28.230 | 209 | 112 | 6 | 400 | 580 | 401 | 599 | 1.32e-13 | 76.3 |
Msa0142920 | AT1G48310.4 | 28.975 | 283 | 161 | 11 | 282 | 549 | 171 | 428 | 1.74e-19 | 94.4 |
Msa0142920 | AT5G20420.1 | 24.409 | 508 | 287 | 19 | 305 | 737 | 714 | 1199 | 5.55e-19 | 94.4 |
Msa0142920 | AT5G07810.1 | 26.962 | 293 | 155 | 10 | 283 | 550 | 204 | 462 | 1.34e-18 | 92.8 |
Msa0142920 | AT3G20010.3 | 33.083 | 133 | 88 | 1 | 623 | 755 | 628 | 759 | 4.52e-18 | 90.9 |
Msa0142920 | AT3G20010.3 | 23.574 | 263 | 160 | 6 | 327 | 548 | 144 | 406 | 4.52e-12 | 71.2 |
Msa0142920 | AT3G20010.2 | 33.083 | 133 | 88 | 1 | 623 | 755 | 603 | 734 | 5.10e-18 | 90.5 |
Msa0142920 | AT3G20010.2 | 23.574 | 263 | 160 | 6 | 327 | 548 | 119 | 381 | 3.96e-12 | 71.2 |
Msa0142920 | AT3G20010.1 | 33.083 | 133 | 88 | 1 | 623 | 755 | 894 | 1025 | 6.82e-18 | 90.5 |
Msa0142920 | AT3G20010.1 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.91e-12 | 71.2 |
Msa0142920 | AT3G20010.5 | 33.083 | 133 | 88 | 1 | 623 | 755 | 894 | 1025 | 6.82e-18 | 90.5 |
Msa0142920 | AT3G20010.5 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.91e-12 | 71.2 |
Msa0142920 | AT3G20010.7 | 33.083 | 133 | 88 | 1 | 623 | 755 | 894 | 1025 | 6.82e-18 | 90.5 |
Msa0142920 | AT3G20010.7 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.91e-12 | 71.2 |
Msa0142920 | AT1G50410.2 | 35.938 | 128 | 79 | 2 | 623 | 748 | 828 | 954 | 7.63e-18 | 90.1 |
Msa0142920 | AT1G50410.2 | 21.895 | 306 | 190 | 9 | 327 | 584 | 339 | 643 | 1.02e-13 | 76.6 |
Msa0142920 | AT1G50410.1 | 35.938 | 128 | 79 | 2 | 623 | 748 | 828 | 954 | 7.63e-18 | 90.1 |
Msa0142920 | AT1G50410.1 | 21.895 | 306 | 190 | 9 | 327 | 584 | 339 | 643 | 1.02e-13 | 76.6 |
Msa0142920 | AT1G50410.3 | 35.938 | 128 | 79 | 2 | 623 | 748 | 828 | 954 | 7.63e-18 | 90.1 |
Msa0142920 | AT1G50410.3 | 21.895 | 306 | 190 | 9 | 327 | 584 | 339 | 643 | 1.02e-13 | 76.6 |
Msa0142920 | AT1G11100.3 | 32.653 | 147 | 96 | 2 | 621 | 766 | 972 | 1116 | 1.23e-17 | 89.7 |
Msa0142920 | AT1G11100.5 | 32.653 | 147 | 96 | 2 | 621 | 766 | 928 | 1072 | 1.27e-17 | 89.7 |
Msa0142920 | AT1G11100.5 | 21.512 | 344 | 174 | 9 | 305 | 580 | 424 | 739 | 1.65e-14 | 79.3 |
Msa0142920 | AT1G11100.4 | 32.653 | 147 | 96 | 2 | 621 | 766 | 1115 | 1259 | 1.42e-17 | 89.7 |
Msa0142920 | AT1G11100.2 | 32.653 | 147 | 96 | 2 | 621 | 766 | 1114 | 1258 | 1.47e-17 | 89.4 |
Msa0142920 | AT1G11100.1 | 32.653 | 147 | 96 | 2 | 621 | 766 | 1071 | 1215 | 1.63e-17 | 89.4 |
Msa0142920 | AT1G11100.1 | 21.512 | 344 | 174 | 9 | 305 | 580 | 567 | 882 | 1.34e-14 | 79.7 |
Msa0142920 | AT1G05120.2 | 32.704 | 159 | 101 | 5 | 601 | 755 | 701 | 857 | 1.14e-16 | 86.3 |
Msa0142920 | AT1G05120.1 | 32.704 | 159 | 101 | 5 | 601 | 755 | 658 | 814 | 1.20e-16 | 86.3 |
Msa0142920 | AT1G02670.4 | 27.969 | 261 | 143 | 7 | 244 | 486 | 85 | 318 | 1.19e-15 | 82.0 |
Msa0142920 | AT3G16600.1 | 24.024 | 333 | 191 | 11 | 286 | 585 | 56 | 359 | 1.86e-14 | 79.0 |
Msa0142920 | AT3G16600.1 | 35.185 | 108 | 68 | 1 | 652 | 757 | 483 | 590 | 4.59e-12 | 70.9 |
Msa0142920 | AT1G08060.1 | 26.522 | 230 | 146 | 9 | 560 | 778 | 514 | 731 | 6.95e-14 | 77.8 |
Msa0142920 | AT1G08060.2 | 26.522 | 230 | 146 | 9 | 560 | 778 | 514 | 731 | 6.95e-14 | 77.8 |
Msa0142920 | AT1G50410.4 | 21.895 | 306 | 190 | 9 | 327 | 584 | 339 | 643 | 8.88e-14 | 77.0 |
Msa0142920 | AT1G08060.3 | 26.407 | 231 | 146 | 9 | 560 | 778 | 514 | 732 | 1.33e-13 | 76.6 |
Msa0142920 | AT1G61140.2 | 21.212 | 297 | 193 | 7 | 330 | 585 | 671 | 967 | 1.73e-12 | 72.8 |
Msa0142920 | AT3G20010.4 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.00e-12 | 71.6 |
Msa0142920 | AT3G20010.6 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.00e-12 | 71.6 |
Msa0142920 | AT3G20010.8 | 23.304 | 339 | 204 | 10 | 327 | 613 | 410 | 744 | 4.00e-12 | 71.6 |
Msa0142920 | AT2G40770.2 | 29.651 | 172 | 102 | 4 | 591 | 746 | 1416 | 1584 | 6.23e-12 | 71.2 |
Msa0142920 | AT2G40770.1 | 29.651 | 172 | 102 | 4 | 591 | 746 | 1416 | 1584 | 6.23e-12 | 71.2 |
Msa0142920 | AT2G40770.3 | 29.651 | 172 | 102 | 4 | 591 | 746 | 1416 | 1584 | 6.23e-12 | 71.2 |
Find 243 sgRNAs with CRISPR-Local
Find 641 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACCATGCACTCCCACTTTA+TGG | 0.101907 | 1_4:+1844816 | None:intergenic |
TGGATTTCTGAAAGCCTTTA+AGG | 0.126912 | 1_4:-1840817 | Msa0142920:intron |
CACTGTTGCTGCCGAAAATT+TGG | 0.176359 | 1_4:-1846807 | Msa0142920:CDS |
TTTCCTTCACCTTCCATTAA+AGG | 0.186653 | 1_4:+1839604 | None:intergenic |
CACTTTCTACACTGCGAAAC+TGG | 0.188146 | 1_4:-1845145 | Msa0142920:CDS |
CACAAATCCACCACCTTTAA+TGG | 0.194130 | 1_4:-1839617 | Msa0142920:CDS |
CGTATGAGAGTTAACCTTAA+AGG | 0.199789 | 1_4:+1840803 | None:intergenic |
CATAGCCCCGAATTTCTTTC+AGG | 0.208876 | 1_4:-1845595 | Msa0142920:CDS |
TGATATCCTTAAACTCTTCT+TGG | 0.215907 | 1_4:+1843674 | None:intergenic |
GTCGGATATCTCTTCGTTTC+AGG | 0.224238 | 1_4:-1845743 | Msa0142920:CDS |
GATTCAATATATTTCGTTCT+AGG | 0.231194 | 1_4:-1845708 | Msa0142920:CDS |
CACTTACAGAGTATTCTTTC+TGG | 0.232566 | 1_4:+1837965 | None:intergenic |
AGTATTAGACTTACACATTC+AGG | 0.247285 | 1_4:+1846946 | None:intergenic |
CTTCAGAAGGAAAACACTTT+TGG | 0.252202 | 1_4:-1840135 | Msa0142920:CDS |
TCCATTTGAAGTCCTTCTTT+TGG | 0.255063 | 1_4:+1839027 | None:intergenic |
TTTCTTCTTGGAAGGTCTTC+TGG | 0.261012 | 1_4:+1839744 | None:intergenic |
TTTCTATTAAGGCATGGATA+TGG | 0.272791 | 1_4:-1838324 | Msa0142920:intron |
TCTACTAGAGCTGGTGGATT+GGG | 0.274315 | 1_4:-1841859 | Msa0142920:CDS |
TGTATTACAAGCTTTCTTCT+TGG | 0.280113 | 1_4:+1839732 | None:intergenic |
CGGCATCGTCGTAATGAATT+TGG | 0.282881 | 1_4:+1840991 | None:intergenic |
GGTAGTGCTGCAGCAGTTAA+TGG | 0.286681 | 1_4:-1838126 | Msa0142920:CDS |
TCTATGTTTCAGACAAATAC+TGG | 0.289261 | 1_4:-1842216 | Msa0142920:intron |
AGAGTTCCAAGAAGAGTTTA+AGG | 0.294300 | 1_4:-1843680 | Msa0142920:CDS |
ACTGTTGCTGCCGAAAATTT+GGG | 0.299584 | 1_4:-1846806 | Msa0142920:CDS |
ACCATGCACTCCCACTTTAT+GGG | 0.301385 | 1_4:+1844817 | None:intergenic |
AAGAAAGAGGTTTCCTCTCT+TGG | 0.308670 | 1_4:-1838013 | Msa0142920:CDS |
CGATGAACCGTAGTCCATTC+AGG | 0.311680 | 1_4:+1846333 | None:intergenic |
GACTGAACTACCTCCTAAAA+AGG | 0.317520 | 1_4:-1843194 | Msa0142920:CDS |
TTTGACAGGAACTCCTCTTC+AGG | 0.319293 | 1_4:-1844585 | Msa0142920:intron |
TGAAGTACTCGTTAGAATTT+CGG | 0.323085 | 1_4:-1839004 | Msa0142920:CDS |
TTCTCTTAACAATATTGTTA+TGG | 0.323347 | 1_4:-1842943 | Msa0142920:CDS |
TTTGGGGTCCAAACCAAGTT+TGG | 0.328329 | 1_4:-1846789 | Msa0142920:CDS |
GGAAAATCGCTAAAAGTTCT+TGG | 0.329834 | 1_4:-1839586 | Msa0142920:CDS |
TTCAAAGGGGATTCCACATT+TGG | 0.332541 | 1_4:+1838168 | None:intergenic |
TTCAATCCCTCAAGTTGATA+TGG | 0.340274 | 1_4:+1845421 | None:intergenic |
TGTTATACTTGCTGATGAAA+TGG | 0.341387 | 1_4:-1845365 | Msa0142920:CDS |
AGCAAAATGCCTTGGGTAAA+GGG | 0.345276 | 1_4:-1840069 | Msa0142920:CDS |
CCTTAAATTGAGAAAATATA+AGG | 0.353648 | 1_4:+1842126 | None:intergenic |
TAAGAAAGCAATACTTTGTA+TGG | 0.354240 | 1_4:+1845214 | None:intergenic |
GAGGCAGTTGATATCTCGTT+TGG | 0.356582 | 1_4:+1837581 | None:intergenic |
TGATGCATTTCAGAATAATC+TGG | 0.371859 | 1_4:-1843861 | Msa0142920:intron |
TTGTTCTTCTTCGGATTCTT+CGG | 0.375937 | 1_4:+1844949 | None:intergenic |
ACGAAACCGGACAACATTAC+TGG | 0.378498 | 1_4:-1840044 | Msa0142920:intron |
AAATCTCCCGTCTTGACAAC+TGG | 0.382938 | 1_4:-1846975 | Msa0142920:CDS |
ATCAGGGAAGTTGCAATTGT+TGG | 0.385913 | 1_4:-1842189 | Msa0142920:CDS |
GACAAGCATTCTCTTTCAAA+AGG | 0.387899 | 1_4:+1845186 | None:intergenic |
TTCATCGAATACTTGCTTGC+AGG | 0.388267 | 1_4:-1846317 | Msa0142920:intron |
CAAACAGAGAGAATATTATA+AGG | 0.391292 | 1_4:-1843143 | Msa0142920:CDS |
AAACAACTTTCATCGTCAAA+TGG | 0.392217 | 1_4:-1846400 | Msa0142920:CDS |
TTTCTTCTTTCTACTAGAGC+TGG | 0.396370 | 1_4:-1841868 | Msa0142920:CDS |
TTCTACTAGAGCTGGTGGAT+TGG | 0.400884 | 1_4:-1841860 | Msa0142920:CDS |
TAGGAAGATTTCTTATAGTA+AGG | 0.401105 | 1_4:-1845683 | Msa0142920:CDS |
AAGAATCTTCAGCATTAAAT+CGG | 0.405258 | 1_4:+1841902 | None:intergenic |
TCGTTTCGCCAAACTTGGTT+TGG | 0.407028 | 1_4:+1846781 | None:intergenic |
CTCTAATAGTGCTACGAGCT+TGG | 0.415041 | 1_4:+1844989 | None:intergenic |
TTTCTGTAGGTTATGTATGT+TGG | 0.417971 | 1_4:-1845018 | Msa0142920:intron |
TGGCAGTATGAAAGGATAGA+TGG | 0.419356 | 1_4:-1841961 | Msa0142920:CDS |
GGCTCTTGAGCGGATTGATT+TGG | 0.421269 | 1_4:+1837069 | None:intergenic |
TTTGTCATTGATAAGGGAAA+AGG | 0.421283 | 1_4:-1838980 | Msa0142920:intron |
AATGATTCCCCTACATTCTC+AGG | 0.422119 | 1_4:-1839154 | Msa0142920:intron |
AGACAAATACTGGAATCATC+AGG | 0.422942 | 1_4:-1842206 | Msa0142920:CDS |
CTGTTATCAGAACTTGTTGT+CGG | 0.424262 | 1_4:+1837048 | None:intergenic |
GCTTGAGAAGTACAAAGATA+TGG | 0.427283 | 1_4:-1838592 | Msa0142920:CDS |
GTCAGATATTGTTGATGATA+AGG | 0.427532 | 1_4:-1838295 | Msa0142920:CDS |
CTTATGCACTTCCTTGATGC+TGG | 0.428463 | 1_4:-1843824 | Msa0142920:CDS |
ATATATTTCGTTCTAGGTCT+AGG | 0.428843 | 1_4:-1845702 | Msa0142920:CDS |
AGAGAATGCTTGTCCACATT+TGG | 0.430349 | 1_4:-1845177 | Msa0142920:CDS |
TGAACTTCTTACGTTTCTCT+TGG | 0.434712 | 1_4:-1845402 | Msa0142920:CDS |
TCTAATAGTGCTACGAGCTT+GGG | 0.436033 | 1_4:+1844990 | None:intergenic |
AGATATCGTTTCGCCAAACT+TGG | 0.436619 | 1_4:+1846776 | None:intergenic |
TGAGGCAGTGTTGACCGATT+AGG | 0.438438 | 1_4:+1837345 | None:intergenic |
ACATGAGTAGCTTGGTTGAC+AGG | 0.438986 | 1_4:-1847963 | Msa0142920:CDS |
GTGTTAGAACACGTAGTTGT+AGG | 0.442285 | 1_4:-1841202 | Msa0142920:CDS |
GAGCAAAATGCCTTGGGTAA+AGG | 0.447216 | 1_4:-1840070 | Msa0142920:CDS |
ATCTATCACCTGAGAATGTA+GGG | 0.448011 | 1_4:+1839146 | None:intergenic |
AACAGTTACTACAAGAAAGT+TGG | 0.448062 | 1_4:-1844908 | Msa0142920:CDS |
AACAATTGAAGAAAGGATGA+TGG | 0.448690 | 1_4:-1841245 | Msa0142920:CDS |
TCACCTTCCATTAAAGGTGG+TGG | 0.449902 | 1_4:+1839610 | None:intergenic |
AAAGGCTCAAAACATAAAAC+AGG | 0.454988 | 1_4:-1841176 | Msa0142920:intron |
ATCCGAAGAAGAACAAGAAA+AGG | 0.456222 | 1_4:-1844942 | Msa0142920:CDS |
TCCAAAAGAAGGACTTCAAA+TGG | 0.456503 | 1_4:-1839028 | Msa0142920:CDS |
TTAAATAATGAAGATGAAAG+TGG | 0.456516 | 1_4:-1840837 | Msa0142920:CDS |
ACGATGAAAGTTGTTTACTT+TGG | 0.457846 | 1_4:+1846407 | None:intergenic |
TCTCCCTAGACTGGTTCAAA+GGG | 0.459359 | 1_4:+1838154 | None:intergenic |
ACGACGATGCCGCTATTGAC+AGG | 0.459469 | 1_4:-1840980 | Msa0142920:intron |
GCTTCAATGATGCGGTATCT+TGG | 0.462055 | 1_4:+1844839 | None:intergenic |
AGGCAGTTGATATCTCGTTT+GGG | 0.462929 | 1_4:+1837582 | None:intergenic |
GAATCCTCATGCTGATCTAC+AGG | 0.464174 | 1_4:-1841511 | Msa0142920:CDS |
TCCCAATGGCATTCATCATA+AGG | 0.469105 | 1_4:+1845772 | None:intergenic |
AAGAGTTGGACGACATCATC+AGG | 0.470615 | 1_4:-1841067 | Msa0142920:CDS |
TTCTCAATTTAAGGGCATGC+TGG | 0.471110 | 1_4:-1842117 | Msa0142920:CDS |
ATCAGTTGTCATACCATTGT+AGG | 0.471290 | 1_4:-1837025 | None:intergenic |
AGGATAGATGGAAATGTTGA+TGG | 0.473210 | 1_4:-1841949 | Msa0142920:CDS |
GCTTTCAGAAACTCTTGCTC+TGG | 0.474776 | 1_4:+1846456 | None:intergenic |
CTTGTGACAGTGATCCTAAT+CGG | 0.475655 | 1_4:-1837359 | Msa0142920:CDS |
CTAGAAGGTGTAGGCTCTGA+TGG | 0.475724 | 1_4:-1839832 | Msa0142920:CDS |
ACAAAACTAGAAACCATTGT+TGG | 0.476448 | 1_4:-1837114 | Msa0142920:CDS |
TTATCATGCTTAGGAAGAGT+TGG | 0.477906 | 1_4:-1841081 | Msa0142920:intron |
GTTATACTTGCTGATGAAAT+GGG | 0.478199 | 1_4:-1845364 | Msa0142920:CDS |
TTCGAGGCTTCATACATTGT+TGG | 0.478580 | 1_4:-1843635 | Msa0142920:CDS |
CGGCCTCTTCATCTCCAACT+TGG | 0.478903 | 1_4:+1840862 | None:intergenic |
CAGCAATATGAGACAAGAAA+AGG | 0.478938 | 1_4:+1839185 | None:intergenic |
TCCTTATGATGAATGCCATT+GGG | 0.482192 | 1_4:-1845773 | Msa0142920:CDS |
AGTTGAAGAGCAAAATGCCT+TGG | 0.482872 | 1_4:-1840077 | Msa0142920:CDS |
TGGGTAAAGGGAAACGAAAC+CGG | 0.483078 | 1_4:-1840057 | Msa0142920:CDS |
ATCAAGAGCAACAAGTTTCG+AGG | 0.484323 | 1_4:-1843651 | Msa0142920:CDS |
AACAACTTTCATCGTCAAAT+GGG | 0.484398 | 1_4:-1846399 | Msa0142920:CDS |
GGCATACCAGTAATGTTGTC+CGG | 0.484467 | 1_4:+1840038 | None:intergenic |
ATCTTATCAATATCATTAAG+TGG | 0.485166 | 1_4:+1846851 | None:intergenic |
AAGTGGTGACAGTAAACAAC+CGG | 0.485794 | 1_4:+1846999 | None:intergenic |
AACCAGTCTAGGGAGAATAA+TGG | 0.489799 | 1_4:-1838147 | Msa0142920:CDS |
GATCTATCACCTGAGAATGT+AGG | 0.492778 | 1_4:+1839145 | None:intergenic |
CTACATCCATATCAACTTGA+GGG | 0.493022 | 1_4:-1845427 | Msa0142920:CDS |
TTCATCTTCATTATTTAAAG+CGG | 0.494781 | 1_4:+1840842 | None:intergenic |
TTCCTTATGATGAATGCCAT+TGG | 0.495300 | 1_4:-1845774 | Msa0142920:CDS |
TTGTCCAACTCGATGAGCTC+TGG | 0.495698 | 1_4:+1841482 | None:intergenic |
TTCTCCCTAGACTGGTTCAA+AGG | 0.500929 | 1_4:+1838153 | None:intergenic |
CTTCTTTCTACTAGAGCTGG+TGG | 0.502040 | 1_4:-1841865 | Msa0142920:CDS |
GACATCTTGTCACGGTATGC+AGG | 0.503180 | 1_4:-1838614 | Msa0142920:CDS |
AATCCCCTTTGAACCAGTCT+AGG | 0.503209 | 1_4:-1838158 | Msa0142920:CDS |
TACCCCTGCAGGATTGAAGA+AGG | 0.504929 | 1_4:-1843224 | Msa0142920:intron |
TTGTTGCCATTCGACCTGAA+TGG | 0.505730 | 1_4:-1846347 | Msa0142920:CDS |
TGAAAATTATTGTGTTTACA+AGG | 0.505863 | 1_4:-1842087 | Msa0142920:intron |
AAATTGATTTCATAAGAAAG+AGG | 0.507071 | 1_4:-1838026 | Msa0142920:CDS |
GTTGAAGAGCAAAATGCCTT+GGG | 0.509231 | 1_4:-1840076 | Msa0142920:CDS |
TTACAAGCTTTCTTCTTGGA+AGG | 0.510255 | 1_4:+1839736 | None:intergenic |
GCACTTCCTTGATGCTGGGA+AGG | 0.511269 | 1_4:-1843819 | Msa0142920:intron |
TCAACTCCTTCCAACATGTA+TGG | 0.511829 | 1_4:+1842897 | None:intergenic |
TGGAAGGAATTGCTAAAAGA+CGG | 0.513386 | 1_4:-1840115 | Msa0142920:CDS |
CAGGGACAATGGTGCTGAGA+AGG | 0.514116 | 1_4:-1845821 | Msa0142920:CDS |
TACCATTATTCTCCCTAGAC+TGG | 0.518566 | 1_4:+1838145 | None:intergenic |
TCATGCTGATCTACAGGCTA+TGG | 0.520030 | 1_4:-1841505 | Msa0142920:CDS |
TCTAAATTGCGATAATAGAT+CGG | 0.520348 | 1_4:+1838065 | None:intergenic |
ACCAGCATTGGCAGTATGAA+AGG | 0.520777 | 1_4:-1841969 | Msa0142920:intron |
GGAAATAACTAAGAAGAAGA+TGG | 0.520915 | 1_4:-1841224 | Msa0142920:CDS |
GTAGATGGTGTTCCAAAAGA+AGG | 0.522402 | 1_4:-1839039 | Msa0142920:intron |
GCCCATAAAGTGGGAGTGCA+TGG | 0.522573 | 1_4:-1844818 | Msa0142920:intron |
TCAGCAGAACATGAGTAGCT+TGG | 0.526460 | 1_4:-1847971 | None:intergenic |
CTTGCTGATGAAATGGGACT+TGG | 0.527291 | 1_4:-1845358 | Msa0142920:intron |
GTATTAGACTTACACATTCA+GGG | 0.527822 | 1_4:+1846947 | None:intergenic |
GATAAAGATGTATACTTCGT+AGG | 0.528219 | 1_4:+1843602 | None:intergenic |
CTTTCCTTCAGACTTTAATG+AGG | 0.528901 | 1_4:-1839540 | Msa0142920:intron |
GGGAGCGCGAATTTGAAAGA+TGG | 0.531612 | 1_4:-1845124 | Msa0142920:CDS |
GTTTCGTTTCCCTTTACCCA+AGG | 0.532290 | 1_4:+1840060 | None:intergenic |
CCTTCACCTTCCATTAAAGG+TGG | 0.532753 | 1_4:+1839607 | None:intergenic |
CATCATCAGGTATGGCTCAA+AGG | 0.534600 | 1_4:-1841054 | Msa0142920:CDS |
TGTATACTTCGTAGGAGATG+TGG | 0.535373 | 1_4:+1843610 | None:intergenic |
CAGTTTCGCAGTGTAGAAAG+TGG | 0.539207 | 1_4:+1845146 | None:intergenic |
GTATACTTCGTAGGAGATGT+GGG | 0.545185 | 1_4:+1843611 | None:intergenic |
GTTTGAGTAGGTTCATTTCG+AGG | 0.545352 | 1_4:+1837604 | None:intergenic |
CACGAGGAACAATTGAAGAA+AGG | 0.548445 | 1_4:-1841252 | Msa0142920:CDS |
CTACTAGAGCTGGTGGATTG+GGG | 0.550233 | 1_4:-1841858 | Msa0142920:CDS |
AAGTATAACATGAGTTTGCT+TGG | 0.551969 | 1_4:+1845378 | None:intergenic |
TTTGTTTAATACAGGGACAA+TGG | 0.554370 | 1_4:-1845832 | Msa0142920:intron |
ATAGCCCCGAATTTCTTTCA+GGG | 0.554459 | 1_4:-1845594 | Msa0142920:CDS |
TATCTCGTTTGGGTTTGAGT+AGG | 0.554911 | 1_4:+1837592 | None:intergenic |
ACTTTCTACACTGCGAAACT+GGG | 0.555145 | 1_4:-1845144 | Msa0142920:CDS |
TATTCAGAGAGTCATCTGTC+AGG | 0.556594 | 1_4:-1838265 | Msa0142920:CDS |
ACTTGTTGTCGGCTCTTGAG+CGG | 0.559813 | 1_4:+1837059 | None:intergenic |
ACGGATTCATGTCAAGCTTG+TGG | 0.560143 | 1_4:-1847072 | Msa0142920:CDS |
GGAGCGCGAATTTGAAAGAT+GGG | 0.560761 | 1_4:-1845123 | Msa0142920:CDS |
TACTAACCTTCCCAGCATCA+AGG | 0.561391 | 1_4:+1843813 | None:intergenic |
ACAAGCATTCTCTTTCAAAA+GGG | 0.561456 | 1_4:+1845187 | None:intergenic |
TTATGCACTTCCTTGATGCT+GGG | 0.561542 | 1_4:-1843823 | Msa0142920:CDS |
GTAACCTCATTAAAGTCTGA+AGG | 0.562752 | 1_4:+1839536 | None:intergenic |
ATCCCCTTTGAACCAGTCTA+GGG | 0.562855 | 1_4:-1838157 | Msa0142920:CDS |
ATGGCCAGAGCTCATCGAGT+TGG | 0.567667 | 1_4:-1841486 | Msa0142920:CDS |
GCACATCCAGTTGTCAAGAC+GGG | 0.570209 | 1_4:+1846969 | None:intergenic |
TTTACCTCATTGTAAAGATG+AGG | 0.570902 | 1_4:+1837327 | None:intergenic |
CATCATTGAAGCCCATAAAG+TGG | 0.573099 | 1_4:-1844828 | Msa0142920:CDS |
AGAAGGAATATCTTGTGAAG+TGG | 0.573172 | 1_4:-1845804 | Msa0142920:CDS |
AGTGGAGCAACCACCAAATG+TGG | 0.573936 | 1_4:+1845164 | None:intergenic |
GATTATGAAGTGGATCATAC+TGG | 0.575019 | 1_4:-1839799 | Msa0142920:CDS |
GGCACATCCAGTTGTCAAGA+CGG | 0.576340 | 1_4:+1846968 | None:intergenic |
TTGGACGACATCATCAGGTA+TGG | 0.577243 | 1_4:-1841062 | Msa0142920:CDS |
TAACTGTGTCTGCCGTTGCA+AGG | 0.577392 | 1_4:+1841830 | None:intergenic |
ATGATGAAGCTTAAAGAGCA+AGG | 0.577899 | 1_4:-1842158 | Msa0142920:CDS |
ACACAGTTATTATATATGAC+AGG | 0.579097 | 1_4:-1841816 | Msa0142920:intron |
CATTCGACCTGAATGGACTA+CGG | 0.580178 | 1_4:-1846340 | Msa0142920:CDS |
CGTAGTCCATTCAGGTCGAA+TGG | 0.580380 | 1_4:+1846341 | None:intergenic |
ACACGTAGTTGTAGGCAGAA+AGG | 0.581138 | 1_4:-1841194 | Msa0142920:CDS |
TTACCATCGCTAGGACAAGT+TGG | 0.581980 | 1_4:-1838219 | Msa0142920:CDS |
TCTTATCAATATCATTAAGT+GGG | 0.582753 | 1_4:+1846852 | None:intergenic |
CGACCAAGTTGGAGATGAAG+AGG | 0.588567 | 1_4:-1840865 | Msa0142920:CDS |
TGAATATGTTGATAAAGTCG+AGG | 0.589470 | 1_4:-1840158 | Msa0142920:CDS |
CTGTTGCTGCCGAAAATTTG+GGG | 0.591712 | 1_4:-1846805 | Msa0142920:CDS |
CGAGGAAGATGATTATGAAG+TGG | 0.592183 | 1_4:-1839809 | Msa0142920:CDS |
GCTGATGAGAATGATGTGGC+TGG | 0.592706 | 1_4:-1841023 | Msa0142920:CDS |
GATAAAGTCGAGGCTTCAGA+AGG | 0.593595 | 1_4:-1840148 | Msa0142920:CDS |
TAAGGCATGGATATGGAAAG+TGG | 0.594164 | 1_4:-1838317 | Msa0142920:intron |
CGATATCTTGTGAAGTGGAA+CGG | 0.595089 | 1_4:-1846761 | Msa0142920:CDS |
CGAAACGATATCTTGTGAAG+TGG | 0.596013 | 1_4:-1846766 | Msa0142920:CDS |
GACAAATACTGGAATCATCA+GGG | 0.596550 | 1_4:-1842205 | Msa0142920:CDS |
TTTGCTCGTCTAGAAGGTGT+AGG | 0.596643 | 1_4:-1839841 | Msa0142920:CDS |
TGATGAAGCTTAAAGAGCAA+GGG | 0.597614 | 1_4:-1842157 | Msa0142920:CDS |
TACATGCAGATAGTTGATGA+AGG | 0.599170 | 1_4:-1844680 | Msa0142920:intron |
TTTGTCGACAAGTCCAACAA+TGG | 0.599234 | 1_4:+1837101 | None:intergenic |
TATCATATATGCATTGCAGA+TGG | 0.603814 | 1_4:-1846736 | Msa0142920:intron |
AAATTCGCATCAGAGAATCC+TGG | 0.605540 | 1_4:-1838656 | Msa0142920:CDS |
ATCATTGAAGCCCATAAAGT+GGG | 0.605724 | 1_4:-1844827 | Msa0142920:CDS |
GAGAAGTACAAAGATATGGA+AGG | 0.606067 | 1_4:-1838588 | Msa0142920:CDS |
GAATGCTTGTCCACATTTGG+TGG | 0.609246 | 1_4:-1845174 | Msa0142920:CDS |
ATGGAGATGAAAGACAAGTA+CGG | 0.610024 | 1_4:-1841930 | Msa0142920:CDS |
AGGTGTAGGCTCTGATGGCG+AGG | 0.610777 | 1_4:-1839827 | Msa0142920:CDS |
ACTACATCCATATCAACTTG+AGG | 0.610933 | 1_4:-1845428 | Msa0142920:CDS |
AGCCCCGAATTTCTTTCAGG+GGG | 0.612280 | 1_4:-1845592 | Msa0142920:intron |
TGCACTTATTCGTTCCACAC+CGG | 0.616251 | 1_4:-1847018 | Msa0142920:CDS |
TGTCATCCATACATGTTGGA+AGG | 0.619601 | 1_4:-1842903 | Msa0142920:CDS |
ATATAAATATCTGCCTACAA+TGG | 0.620206 | 1_4:+1837012 | None:intergenic |
CAACTCAGGAAAAGTTTGAG+AGG | 0.620958 | 1_4:-1847855 | Msa0142920:CDS |
TTTCATACATCGATGTCCAG+AGG | 0.621324 | 1_4:-1837141 | Msa0142920:CDS |
ATGTTGTCATCCATACATGT+TGG | 0.622207 | 1_4:-1842907 | Msa0142920:CDS |
TAGCCCCGAATTTCTTTCAG+GGG | 0.624068 | 1_4:-1845593 | Msa0142920:CDS |
TGGTGCAAATATGCCAAATG+TGG | 0.625849 | 1_4:-1838181 | Msa0142920:CDS |
CTTTATGGGCTTCAATGATG+CGG | 0.627500 | 1_4:+1844831 | None:intergenic |
GCAGCAGTTAATGGAGCACA+TGG | 0.629634 | 1_4:-1838117 | Msa0142920:CDS |
AATCCACCACCTTTAATGGA+AGG | 0.630322 | 1_4:-1839613 | Msa0142920:CDS |
GAGATATTAACTCGCCGTGG+TGG | 0.637525 | 1_4:-1843100 | Msa0142920:CDS |
CCACCTTTAATGGAAGGTGA+AGG | 0.639132 | 1_4:-1839607 | Msa0142920:CDS |
GAGCCAACTTGTCCTAGCGA+TGG | 0.639701 | 1_4:+1838216 | None:intergenic |
TTGTTGGATCGCGACCAAGT+TGG | 0.639950 | 1_4:-1840876 | Msa0142920:CDS |
ATCTTACTTGTGCTCCACCA+CGG | 0.642674 | 1_4:+1843086 | None:intergenic |
ATGCCATTGGGAGCTTGAGT+CGG | 0.643092 | 1_4:-1845761 | Msa0142920:CDS |
TTCATAAAGTTACCATCGCT+AGG | 0.645494 | 1_4:-1838228 | Msa0142920:CDS |
TTTCAGACGACATCTTGTCA+CGG | 0.646023 | 1_4:-1838622 | Msa0142920:CDS |
TGTCAAGCTTGTGGAAAGAG+CGG | 0.655768 | 1_4:-1847063 | Msa0142920:CDS |
TATCCGACTCAAGCTCCCAA+TGG | 0.656240 | 1_4:+1845758 | None:intergenic |
TTGACAGATGTGCAATGCTG+TGG | 0.664356 | 1_4:-1837184 | Msa0142920:intron |
CTCCCTAGACTGGTTCAAAG+GGG | 0.666240 | 1_4:+1838155 | None:intergenic |
ACTTTGTTACCTGTCAATAG+CGG | 0.668488 | 1_4:+1840971 | None:intergenic |
TATGAGATATTAACTCGCCG+TGG | 0.669438 | 1_4:-1843103 | Msa0142920:CDS |
GCAGGACAAGATGAAAGCAA+CGG | 0.671245 | 1_4:-1837644 | Msa0142920:intron |
ATTGGGGATAAACCTTGCAA+CGG | 0.673951 | 1_4:-1841842 | Msa0142920:CDS |
ATACATACAACATTCATCTG+AGG | 0.676161 | 1_4:+1845098 | None:intergenic |
ACTGCCTCATCTTTACAATG+AGG | 0.677059 | 1_4:-1837331 | Msa0142920:intron |
GGACAAGATGAAAGCAACGG+CGG | 0.687105 | 1_4:-1837641 | Msa0142920:CDS |
TCGAGTTGGACAAACTAACA+AGG | 0.691334 | 1_4:-1841472 | Msa0142920:intron |
ATTTGCTGATGAGAATGATG+TGG | 0.692935 | 1_4:-1841027 | Msa0142920:CDS |
ATAGCCTGTAGATCAGCATG+AGG | 0.700568 | 1_4:+1841507 | None:intergenic |
TCTATCACCTGAGAATGTAG+GGG | 0.707255 | 1_4:+1839147 | None:intergenic |
TATACTTCGTAGGAGATGTG+GGG | 0.713293 | 1_4:+1843612 | None:intergenic |
GTGACAGTAAACAACCGGTG+TGG | 0.720943 | 1_4:+1847004 | None:intergenic |
TATGAAGTGGATCATACTGG+TGG | 0.735529 | 1_4:-1839796 | Msa0142920:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAACTGATATATTATTT+TGG | - | chr1_4:1839424-1839443 | Msa0142920:intron | 10.0% |
!! | AAGATATTTATTTCATAATT+AGG | + | chr1_4:1840834-1840853 | None:intergenic | 10.0% |
!! | AAATAAATGAAAAATATGAA+GGG | + | chr1_4:1843200-1843219 | None:intergenic | 10.0% |
!! | TAAATAAATGAAAAATATGA+AGG | + | chr1_4:1843201-1843220 | None:intergenic | 10.0% |
!!! | ATTTTATATATTGTCTAATT+TGG | - | chr1_4:1843403-1843422 | Msa0142920:intron | 10.0% |
!!! | TTTTTTTTATAATAGATTGT+TGG | - | chr1_4:1844095-1844114 | Msa0142920:intron | 10.0% |
!!! | ATATTTTTGTTTCAAAAATT+AGG | - | chr1_4:1844420-1844439 | Msa0142920:intron | 10.0% |
!!! | ATTCTAATTTAGTTTTATTT+TGG | - | chr1_4:1845694-1845713 | Msa0142920:CDS | 10.0% |
!! | AGTAAAAAATTAATGTAAAT+AGG | + | chr1_4:1846249-1846268 | None:intergenic | 10.0% |
!! | CATTAAATGAAATAAAATAA+GGG | + | chr1_4:1846563-1846582 | None:intergenic | 10.0% |
!! | TCATTAAATGAAATAAAATA+AGG | + | chr1_4:1846564-1846583 | None:intergenic | 10.0% |
!!! | TTTTAATAAGTTTTCTTCTT+AGG | - | chr1_4:1838063-1838082 | Msa0142920:CDS | 15.0% |
!!! | AAAACTCTTTAAAGTATTTT+TGG | + | chr1_4:1838432-1838451 | None:intergenic | 15.0% |
!!! | TAGTATTTTTCATATAAGAA+AGG | + | chr1_4:1838722-1838741 | None:intergenic | 15.0% |
!! | CAAACTATAATTCTTAATTT+AGG | - | chr1_4:1838860-1838879 | Msa0142920:intron | 15.0% |
!! | AATTATAAAATCATTTCAGA+GGG | + | chr1_4:1839007-1839026 | None:intergenic | 15.0% |
!! | AAATTATAAAATCATTTCAG+AGG | + | chr1_4:1839008-1839027 | None:intergenic | 15.0% |
!! | TGAATTAAGAATAATAGTAA+AGG | + | chr1_4:1839698-1839717 | None:intergenic | 15.0% |
!! | TTCCTATTAAAGATTATATA+AGG | - | chr1_4:1840529-1840548 | Msa0142920:intron | 15.0% |
!! | ATCCTTATATAATCTTTAAT+AGG | + | chr1_4:1840534-1840553 | None:intergenic | 15.0% |
!! | TATTAAAGATTATATAAGGA+TGG | - | chr1_4:1840533-1840552 | Msa0142920:intron | 15.0% |
!! | ATTTACAATTTATTTACTGA+TGG | + | chr1_4:1840568-1840587 | None:intergenic | 15.0% |
!! | ATCAGTAAATAAATTGTAAA+TGG | - | chr1_4:1840567-1840586 | Msa0142920:intron | 15.0% |
!!! | ATACAAAATTCAAATGTTTT+AGG | + | chr1_4:1840925-1840944 | None:intergenic | 15.0% |
!!! | TCATACTTTTTTCATAATAT+AGG | + | chr1_4:1841205-1841224 | None:intergenic | 15.0% |
!! | CAGCTTAAAAAAAAAAAAAT+TGG | - | chr1_4:1841685-1841704 | Msa0142920:intron | 15.0% |
!!! | TTAATTTCTAAGAGAATTTT+TGG | + | chr1_4:1842401-1842420 | None:intergenic | 15.0% |
!!! | GAAATTAATAATTAGAGTTT+TGG | - | chr1_4:1842413-1842432 | Msa0142920:intron | 15.0% |
!!! | CATATATATTTTTTTCTGAT+TGG | - | chr1_4:1842724-1842743 | Msa0142920:intron | 15.0% |
!!! | CTTATATTTTCTCAATTTAA+GGG | - | chr1_4:1842862-1842881 | Msa0142920:intron | 15.0% |
!!! | AGATTATTTTAAATGATTTG+AGG | + | chr1_4:1844627-1844646 | None:intergenic | 15.0% |
!!! | TATCATTTCATTGATAATAT+TGG | - | chr1_4:1845292-1845311 | Msa0142920:intron | 15.0% |
!! | AATAAGTTAACTGAAAATAT+AGG | + | chr1_4:1845904-1845923 | None:intergenic | 15.0% |
!!! | TACAATTAAATCTTTGATTT+GGG | + | chr1_4:1847565-1847584 | None:intergenic | 15.0% |
!! | TTACAATTAAATCTTTGATT+TGG | + | chr1_4:1847566-1847585 | None:intergenic | 15.0% |
!! | ATACCAAATTAAACAGTATA+AGG | + | chr1_4:1837402-1837421 | None:intergenic | 20.0% |
!!! | TTATACTGTTTAATTTGGTA+TGG | - | chr1_4:1837401-1837420 | Msa0142920:intron | 20.0% |
!! | TATTTGAACAGATAAAAATG+AGG | + | chr1_4:1837525-1837544 | None:intergenic | 20.0% |
!!! | TTTTGCTGATATCTTTTATA+TGG | - | chr1_4:1837686-1837705 | Msa0142920:intron | 20.0% |
!!! | TTTCATGAATTTTATGTATC+AGG | - | chr1_4:1837781-1837800 | Msa0142920:intron | 20.0% |
!! | TCTTATCAATATCATTAAGT+GGG | + | chr1_4:1838138-1838157 | None:intergenic | 20.0% |
!! | ATCTTATCAATATCATTAAG+TGG | + | chr1_4:1838139-1838158 | None:intergenic | 20.0% |
!! | AAATTTATAAAGCTGGTAAA+TGG | + | chr1_4:1838498-1838517 | None:intergenic | 20.0% |
!!! | CTTTATAAATTTTCTCTTCA+GGG | - | chr1_4:1838506-1838525 | Msa0142920:intron | 20.0% |
!!! | CTTTAAATGTTTTTGAACTT+CGG | - | chr1_4:1838765-1838784 | Msa0142920:intron | 20.0% |
!! | ATTATAAAATCATTTCAGAG+GGG | + | chr1_4:1839006-1839025 | None:intergenic | 20.0% |
!! | AACAAAATATTCCATAACTT+GGG | + | chr1_4:1839141-1839160 | None:intergenic | 20.0% |
!! | AAACAAAATATTCCATAACT+TGG | + | chr1_4:1839142-1839161 | None:intergenic | 20.0% |
!!! | TGGAATATTTTGTTTAATAC+AGG | - | chr1_4:1839147-1839166 | Msa0142920:intron | 20.0% |
!!! | GGAATATTTTGTTTAATACA+GGG | - | chr1_4:1839148-1839167 | Msa0142920:intron | 20.0% |
!! | TCTAATAAAACAAAGACAAA+AGG | + | chr1_4:1839496-1839515 | None:intergenic | 20.0% |
!!! | TGTCTTTGTTTTATTAGATT+TGG | - | chr1_4:1839498-1839517 | Msa0142920:intron | 20.0% |
!! | TTACATAAGTATATGAAATC+AGG | + | chr1_4:1839529-1839548 | None:intergenic | 20.0% |
!! | TCATATACTTATGTAAATGA+AGG | - | chr1_4:1839533-1839552 | Msa0142920:intron | 20.0% |
!! | TAATGTATGTTAATTTCTGT+AGG | - | chr1_4:1839956-1839975 | Msa0142920:intron | 20.0% |
!!! | AATTTTAAATAAACCTGAAG+AGG | + | chr1_4:1840418-1840437 | None:intergenic | 20.0% |
!! | GTAAATAAATTGTAAATGGA+TGG | - | chr1_4:1840571-1840590 | Msa0142920:intron | 20.0% |
!!! | ATTTTTTAGTGGCTTATAAA+TGG | - | chr1_4:1840599-1840618 | Msa0142920:intron | 20.0% |
!! | CATATTATTCTCAATTAGAT+TGG | - | chr1_4:1840748-1840767 | Msa0142920:intron | 20.0% |
!!! | CTTATTTTGACTTACTAAAT+AGG | - | chr1_4:1841710-1841729 | Msa0142920:intron | 20.0% |
!! | TTCTCTTAACAATATTGTTA+TGG | - | chr1_4:1842044-1842063 | Msa0142920:intron | 20.0% |
!! | TTGTTGTCTATTATAAATAC+TGG | - | chr1_4:1842184-1842203 | Msa0142920:CDS | 20.0% |
!! | ATTAATTATTCCTGTGTTTA+TGG | - | chr1_4:1842290-1842309 | Msa0142920:intron | 20.0% |
!!! | ATTAATAATTAGAGTTTTGG+TGG | - | chr1_4:1842416-1842435 | Msa0142920:intron | 20.0% |
!!! | TTAATAATTAGAGTTTTGGT+GGG | - | chr1_4:1842417-1842436 | Msa0142920:intron | 20.0% |
!! | GAAACATAGAAAAATGAAAA+AGG | + | chr1_4:1842761-1842780 | None:intergenic | 20.0% |
!! | CCTTAAATTGAGAAAATATA+AGG | + | chr1_4:1842864-1842883 | None:intergenic | 20.0% |
!!! | CCTTATATTTTCTCAATTTA+AGG | - | chr1_4:1842861-1842880 | Msa0142920:intron | 20.0% |
!! | TGAAAATTATTGTGTTTACA+AGG | - | chr1_4:1842900-1842919 | Msa0142920:CDS | 20.0% |
!!! | TTTTTGTTTGTCAAACATTA+TGG | - | chr1_4:1843602-1843621 | Msa0142920:intron | 20.0% |
!! | TTCATCTTCATTATTTAAAG+CGG | + | chr1_4:1844148-1844167 | None:intergenic | 20.0% |
!! | TTAAATAATGAAGATGAAAG+TGG | - | chr1_4:1844150-1844169 | Msa0142920:intron | 20.0% |
!!! | CTTCTAATTTGATTTGTATT+TGG | - | chr1_4:1844229-1844248 | Msa0142920:intron | 20.0% |
!!! | TTTGGTCATGTATATTTTTT+TGG | - | chr1_4:1844247-1844266 | Msa0142920:intron | 20.0% |
!! | AAATGATTTGAGGATAAAAT+GGG | + | chr1_4:1844617-1844636 | None:intergenic | 20.0% |
!! | TAAATGATTTGAGGATAAAA+TGG | + | chr1_4:1844618-1844637 | None:intergenic | 20.0% |
!!! | TCATTTTGTGTTCTTTATTT+AGG | - | chr1_4:1844755-1844774 | Msa0142920:intron | 20.0% |
!!! | ATAACTTGTATTAGTATACA+AGG | - | chr1_4:1844990-1845009 | Msa0142920:CDS | 20.0% |
!!! | TAACTTGTATTAGTATACAA+GGG | - | chr1_4:1844991-1845010 | Msa0142920:CDS | 20.0% |
!!! | TTGATCTATATATTTTGAAC+AGG | - | chr1_4:1845771-1845790 | Msa0142920:CDS | 20.0% |
!! | AATGTAAATAGGATAGTTAT+GGG | + | chr1_4:1846238-1846257 | None:intergenic | 20.0% |
!! | TAATGTAAATAGGATAGTTA+TGG | + | chr1_4:1846239-1846258 | None:intergenic | 20.0% |
!! | AAAACATATTCATCAACTAA+AGG | + | chr1_4:1846282-1846301 | None:intergenic | 20.0% |
!!! | AAGTGTCTTTTAATAGTTAT+AGG | - | chr1_4:1846490-1846509 | Msa0142920:intron | 20.0% |
!!! | AACATAGTTCTTTTCTATTA+AGG | - | chr1_4:1846652-1846671 | Msa0142920:intron | 20.0% |
!!! | AAATTGATTTCATAAGAAAG+AGG | - | chr1_4:1846961-1846980 | Msa0142920:CDS | 20.0% |
!!! | ATACTTTGTTTATTTCTCTT+TGG | - | chr1_4:1847078-1847097 | Msa0142920:CDS | 20.0% |
!!! | TGATAATTGATGACAATAAT+TGG | + | chr1_4:1847163-1847182 | None:intergenic | 20.0% |
!!! | ATACTTATTTTTTCAAGTTG+AGG | + | chr1_4:1847428-1847447 | None:intergenic | 20.0% |
! | ACCAATGCTAACAAAATTTA+GGG | + | chr1_4:1837248-1837267 | None:intergenic | 25.0% |
! | TACCAATGCTAACAAAATTT+AGG | + | chr1_4:1837249-1837268 | None:intergenic | 25.0% |
! | GATCCTTATACTGTTTAATT+TGG | - | chr1_4:1837396-1837415 | Msa0142920:intron | 25.0% |
! | AACAGTATTATTTCACAGAA+AGG | + | chr1_4:1837479-1837498 | None:intergenic | 25.0% |
!! | TATCCTTTTCCAATAGAAAA+CGG | - | chr1_4:1837896-1837915 | Msa0142920:intron | 25.0% |
! | TTGTAGTGATAGTAGTAAAT+TGG | + | chr1_4:1838373-1838392 | None:intergenic | 25.0% |
! | GAAGAGAAAATTTATAAAGC+TGG | + | chr1_4:1838505-1838524 | None:intergenic | 25.0% |
!! | GCTTTATAAATTTTCTCTTC+AGG | - | chr1_4:1838505-1838524 | Msa0142920:intron | 25.0% |
!! | CAAAAACATTTAAAGTAACC+AGG | + | chr1_4:1838760-1838779 | None:intergenic | 25.0% |
! | AAAATTCCTGTTAACATTCT+AGG | + | chr1_4:1838812-1838831 | None:intergenic | 25.0% |
!! | TAGAATGTTAACAGGAATTT+TGG | - | chr1_4:1838811-1838830 | Msa0142920:intron | 25.0% |
! | TTAATTTAGGAAGAAAGCTT+GGG | - | chr1_4:1838873-1838892 | Msa0142920:intron | 25.0% |
!! | CGATATTTTCATAGAAAAGA+TGG | + | chr1_4:1839111-1839130 | None:intergenic | 25.0% |
! | GATTCAATATATTTCGTTCT+AGG | - | chr1_4:1839279-1839298 | Msa0142920:intron | 25.0% |
! | TAGGAAGATTTCTTATAGTA+AGG | - | chr1_4:1839304-1839323 | Msa0142920:intron | 25.0% |
! | ATTCCAAAGAAGAAGAAAAA+AGG | + | chr1_4:1839467-1839486 | None:intergenic | 25.0% |
! | TAGTAAAGGACACAAATATT+AGG | + | chr1_4:1839684-1839703 | None:intergenic | 25.0% |
! | TAAGAAAGCAATACTTTGTA+TGG | + | chr1_4:1839776-1839795 | None:intergenic | 25.0% |
!!! | CTTGTAGTAACTGTTTTTTT+AGG | + | chr1_4:1840074-1840093 | None:intergenic | 25.0% |
! | TAATTAGATGGTAAGTAGAA+TGG | + | chr1_4:1840209-1840228 | None:intergenic | 25.0% |
! | ACAAAAGAGATGTAATTAGA+TGG | + | chr1_4:1840221-1840240 | None:intergenic | 25.0% |
! | CTAAAAATGTGGTAATACTA+GGG | + | chr1_4:1840694-1840713 | None:intergenic | 25.0% |
! | TCATGTAAAAGCTAAAAATG+TGG | + | chr1_4:1840705-1840724 | None:intergenic | 25.0% |
!!! | TATTGTTGATTTTTACATCC+TGG | - | chr1_4:1841052-1841071 | Msa0142920:CDS | 25.0% |
! | GTTATCTAATATACCCTTAA+AGG | - | chr1_4:1841232-1841251 | Msa0142920:CDS | 25.0% |
!! | TTGATACTGGAAGAAATTTT+GGG | - | chr1_4:1841635-1841654 | Msa0142920:intron | 25.0% |
! | CAAACAGAGAGAATATTATA+AGG | - | chr1_4:1841844-1841863 | Msa0142920:CDS | 25.0% |
! | TGTTAACTTTCTTAACAAAG+AGG | - | chr1_4:1842263-1842282 | Msa0142920:intron | 25.0% |
!!! | TAATAATTAGAGTTTTGGTG+GGG | - | chr1_4:1842418-1842437 | Msa0142920:intron | 25.0% |
! | AAGAATCTTCAGCATTAAAT+CGG | + | chr1_4:1843088-1843107 | None:intergenic | 25.0% |
! | ACACAGTTATTATATATGAC+AGG | - | chr1_4:1843171-1843190 | Msa0142920:CDS | 25.0% |
!!! | AACATGACTAGTTATTTTCT+TGG | - | chr1_4:1843319-1843338 | Msa0142920:intron | 25.0% |
! | AACTGTTATTCTATAGTGAT+TGG | - | chr1_4:1843454-1843473 | Msa0142920:intron | 25.0% |
!!! | TTTTTTTCACTAATATGCAG+TGG | - | chr1_4:1843545-1843564 | Msa0142920:intron | 25.0% |
! | CAAAACATAAAACAGGTAAT+AGG | - | chr1_4:1843818-1843837 | Msa0142920:intron | 25.0% |
! | TTCTGATTATTATCATGCTT+AGG | - | chr1_4:1843897-1843916 | Msa0142920:intron | 25.0% |
!!! | GTTTTAGGAATGCATATATA+TGG | + | chr1_4:1844339-1844358 | None:intergenic | 25.0% |
! | GAAACAAAAATATCCAATCT+GGG | + | chr1_4:1844413-1844432 | None:intergenic | 25.0% |
! | TGAAACAAAAATATCCAATC+TGG | + | chr1_4:1844414-1844433 | None:intergenic | 25.0% |
! | ATATATTCTCACTAAAGGAT+TGG | + | chr1_4:1844454-1844473 | None:intergenic | 25.0% |
! | CTTGTATATATTCTCACTAA+AGG | + | chr1_4:1844459-1844478 | None:intergenic | 25.0% |
! | TATTTCATAAAGAAGCAGAA+TGG | + | chr1_4:1844520-1844539 | None:intergenic | 25.0% |
! | TGATGTTGAATTAAGATTGT+AGG | + | chr1_4:1844700-1844719 | None:intergenic | 25.0% |
! | AGTTATACAAGTAAATGACA+CGG | + | chr1_4:1844976-1844995 | None:intergenic | 25.0% |
! | TCAACAAAAACACAATCAAA+AGG | + | chr1_4:1845072-1845091 | None:intergenic | 25.0% |
!!! | TTTTGATTGTGTTTTTGTTG+AGG | - | chr1_4:1845071-1845090 | Msa0142920:intron | 25.0% |
!! | CTAATTGTTAGTTTACGATT+AGG | - | chr1_4:1845477-1845496 | Msa0142920:intron | 25.0% |
! | TCTTTAATATGTAAGGGTTA+GGG | + | chr1_4:1845513-1845532 | None:intergenic | 25.0% |
! | TAACCCTTACATATTAAAGA+GGG | - | chr1_4:1845513-1845532 | Msa0142920:intron | 25.0% |
! | AAACCCTCTTTAATATGTAA+GGG | + | chr1_4:1845519-1845538 | None:intergenic | 25.0% |
! | AAAACCCTCTTTAATATGTA+AGG | + | chr1_4:1845520-1845539 | None:intergenic | 25.0% |
!!! | TATTAAAGAGGGTTTTTTCA+TGG | - | chr1_4:1845524-1845543 | Msa0142920:intron | 25.0% |
! | TATTTGCAGTTTATCTCATT+TGG | - | chr1_4:1845550-1845569 | Msa0142920:intron | 25.0% |
! | TTAGAATATGAGACATGTTA+TGG | + | chr1_4:1845681-1845700 | None:intergenic | 25.0% |
!!! | CTATATATTTTGAACAGGTA+TGG | - | chr1_4:1845776-1845795 | Msa0142920:CDS | 25.0% |
!!! | AAGTTTTCTAATTTGTGAGA+GGG | + | chr1_4:1846110-1846129 | None:intergenic | 25.0% |
!!! | AAAGTTTTCTAATTTGTGAG+AGG | + | chr1_4:1846111-1846130 | None:intergenic | 25.0% |
! | CATTTCAAGAAAGAAATTCT+AGG | + | chr1_4:1846136-1846155 | None:intergenic | 25.0% |
! | CTAGAATTTCTTTCTTGAAA+TGG | - | chr1_4:1846134-1846153 | Msa0142920:intron | 25.0% |
!! | AAATGGTCATGTAAATTTTC+AGG | - | chr1_4:1846151-1846170 | Msa0142920:intron | 25.0% |
!! | TGCTCTTTTGTAATCTTTAT+AGG | - | chr1_4:1846604-1846623 | Msa0142920:intron | 25.0% |
! | ATAGAAAAGAACTATGTTAG+AGG | + | chr1_4:1846650-1846669 | None:intergenic | 25.0% |
! | TCTAAATTGCGATAATAGAT+CGG | + | chr1_4:1846925-1846944 | None:intergenic | 25.0% |
! | ATTGTCATCAATTATCAACT+TGG | - | chr1_4:1847166-1847185 | Msa0142920:intron | 25.0% |
! | GGTGATTTATATATGAATGA+TGG | - | chr1_4:1847713-1847732 | Msa0142920:intron | 25.0% |
AATGGTTAAAGCAAAAAGGA+AGG | + | chr1_4:1837187-1837206 | None:intergenic | 30.0% | |
! | TCCCTAAATTTTGTTAGCAT+TGG | - | chr1_4:1837244-1837263 | Msa0142920:intron | 30.0% |
TAGACTGAAAATTCCGATAT+CGG | + | chr1_4:1837331-1837350 | None:intergenic | 30.0% | |
!! | CTGCATTTGTTGATTTACAT+TGG | - | chr1_4:1837629-1837648 | Msa0142920:CDS | 30.0% |
!! | GTATCATATTCACTGATTTG+AGG | - | chr1_4:1837810-1837829 | Msa0142920:intron | 30.0% |
AGGATAGAAACATCATAACA+AGG | + | chr1_4:1837882-1837901 | None:intergenic | 30.0% | |
! | AATCCGTTTTCTATTGGAAA+AGG | + | chr1_4:1837902-1837921 | None:intergenic | 30.0% |
GTATTAGACTTACACATTCA+GGG | + | chr1_4:1838043-1838062 | None:intergenic | 30.0% | |
AGTATTAGACTTACACATTC+AGG | + | chr1_4:1838044-1838063 | None:intergenic | 30.0% | |
TATCATATATGCATTGCAGA+TGG | - | chr1_4:1838251-1838270 | Msa0142920:CDS | 30.0% | |
! | TAGTTACTTTCAGCTTCTAA+CGG | - | chr1_4:1838301-1838320 | Msa0142920:CDS | 30.0% |
GTAGTAAATTGGTTGAGATT+CGG | + | chr1_4:1838362-1838381 | None:intergenic | 30.0% | |
ACGATGAAAGTTGTTTACTT+TGG | + | chr1_4:1838583-1838602 | None:intergenic | 30.0% | |
AAACAACTTTCATCGTCAAA+TGG | - | chr1_4:1838587-1838606 | Msa0142920:CDS | 30.0% | |
AACAACTTTCATCGTCAAAT+GGG | - | chr1_4:1838588-1838607 | Msa0142920:CDS | 30.0% | |
ATTTGTCCTAGAATGTTAAC+AGG | - | chr1_4:1838803-1838822 | Msa0142920:intron | 30.0% | |
CTTAATTTAGGAAGAAAGCT+TGG | - | chr1_4:1838872-1838891 | Msa0142920:intron | 30.0% | |
! | GGTTGTTGAGATTTTCAAAA+AGG | - | chr1_4:1838894-1838913 | Msa0142920:intron | 30.0% |
CTAGATGAAAAACATGATGA+TGG | + | chr1_4:1838936-1838955 | None:intergenic | 30.0% | |
GGTTCATCAAAAACATAAGA+AGG | + | chr1_4:1838965-1838984 | None:intergenic | 30.0% | |
ATCGTAAAATTCCCAAGTTA+TGG | - | chr1_4:1839127-1839146 | Msa0142920:intron | 30.0% | |
TTTGTTTAATACAGGGACAA+TGG | - | chr1_4:1839155-1839174 | Msa0142920:CDS | 30.0% | |
! | ATATATTTCGTTCTAGGTCT+AGG | - | chr1_4:1839285-1839304 | Msa0142920:intron | 30.0% |
AGAAGAAGAAAAAAGGCAAA+AGG | + | chr1_4:1839460-1839479 | None:intergenic | 30.0% | |
!!! | TTGCCTTTTTTCTTCTTCTT+TGG | - | chr1_4:1839461-1839480 | Msa0142920:intron | 30.0% |
! | AAGTATAACATGAGTTTGCT+TGG | + | chr1_4:1839612-1839631 | None:intergenic | 30.0% |
! | TGTTATACTTGCTGATGAAA+TGG | - | chr1_4:1839622-1839641 | Msa0142920:CDS | 30.0% |
! | GTTATACTTGCTGATGAAAT+GGG | - | chr1_4:1839623-1839642 | Msa0142920:CDS | 30.0% |
ACAAGCATTCTCTTTCAAAA+GGG | + | chr1_4:1839803-1839822 | None:intergenic | 30.0% | |
ATACATACAACATTCATCTG+AGG | + | chr1_4:1839892-1839911 | None:intergenic | 30.0% | |
TTTCTGTAGGTTATGTATGT+TGG | - | chr1_4:1839969-1839988 | Msa0142920:intron | 30.0% | |
! | TTCCTTTTCTTGTTCTTCTT+CGG | + | chr1_4:1840050-1840069 | None:intergenic | 30.0% |
AACAGTTACTACAAGAAAGT+TGG | - | chr1_4:1840079-1840098 | Msa0142920:CDS | 30.0% | |
AACATACAATAAGTCTGGTA+TGG | + | chr1_4:1840445-1840464 | None:intergenic | 30.0% | |
ACATCAACATACAATAAGTC+TGG | + | chr1_4:1840450-1840469 | None:intergenic | 30.0% | |
!!! | GTTGATGTATCGACTTTTTT+AGG | - | chr1_4:1840462-1840481 | Msa0142920:intron | 30.0% |
!!! | GTATCGACTTTTTTAGGAAT+TGG | - | chr1_4:1840468-1840487 | Msa0142920:intron | 30.0% |
!!! | GGATGGATTTGATTTTTTAG+TGG | - | chr1_4:1840588-1840607 | Msa0142920:intron | 30.0% |
TTCGTTTGGATTATAATGCA+TGG | + | chr1_4:1840644-1840663 | None:intergenic | 30.0% | |
GCTAAAAATGTGGTAATACT+AGG | + | chr1_4:1840695-1840714 | None:intergenic | 30.0% | |
CTCAATTAGATTGGATTCAA+AGG | - | chr1_4:1840757-1840776 | Msa0142920:intron | 30.0% | |
!! | TTGCTAGATTGTTTTTCCTA+TGG | - | chr1_4:1840981-1841000 | Msa0142920:CDS | 30.0% |
!! | TTGAGTTTTATGTTGGAAGA+TGG | - | chr1_4:1841083-1841102 | Msa0142920:intron | 30.0% |
TGATGCATTTCAGAATAATC+TGG | - | chr1_4:1841126-1841145 | Msa0142920:intron | 30.0% | |
TGAAAGTTCATAAGATACGT+TGG | + | chr1_4:1841259-1841278 | None:intergenic | 30.0% | |
TATGAACTTTCAATTGCTTC+TGG | - | chr1_4:1841267-1841286 | Msa0142920:CDS | 30.0% | |
TGATATCCTTAAACTCTTCT+TGG | + | chr1_4:1841316-1841335 | None:intergenic | 30.0% | |
GATAAAGATGTATACTTCGT+AGG | + | chr1_4:1841388-1841407 | None:intergenic | 30.0% | |
TTGTGCACTCTTAAATAATC+TGG | - | chr1_4:1841569-1841588 | Msa0142920:intron | 30.0% | |
! | TCTTAAGTAATGGTTGATAC+TGG | - | chr1_4:1841622-1841641 | Msa0142920:intron | 30.0% |
! | GTTGATACTGGAAGAAATTT+TGG | - | chr1_4:1841634-1841653 | Msa0142920:intron | 30.0% |
! | AAATAGGACTATCTGAAATG+TGG | - | chr1_4:1841726-1841745 | Msa0142920:intron | 30.0% |
!! | ATAATAAGCTCCTTTTTAGG+AGG | + | chr1_4:1841806-1841825 | None:intergenic | 30.0% |
! | CGTATAATAAGCTCCTTTTT+AGG | + | chr1_4:1841809-1841828 | None:intergenic | 30.0% |
! | TCTTTTTCTTTGTGAAGAAC+TGG | + | chr1_4:1842117-1842136 | None:intergenic | 30.0% |
!! | AATGCCTAAAAGACTTGTTT+TGG | + | chr1_4:1842318-1842337 | None:intergenic | 30.0% |
!! | AATAATTAGAGTTTTGGTGG+GGG | - | chr1_4:1842419-1842438 | Msa0142920:intron | 30.0% |
CTGCATAAAAACTTTCAGAA+TGG | - | chr1_4:1842599-1842618 | Msa0142920:intron | 30.0% | |
TCTATGTTTCAGACAAATAC+TGG | - | chr1_4:1842771-1842790 | Msa0142920:intron | 30.0% | |
AAAATTCAACTGTGCAGAAA+CGG | + | chr1_4:1842960-1842979 | None:intergenic | 30.0% | |
! | TTTGTTTAAAACACCAGCAT+TGG | - | chr1_4:1843006-1843025 | Msa0142920:intron | 30.0% |
! | AATATGCAGTGGTTTTTGTT+TGG | - | chr1_4:1843556-1843575 | Msa0142920:intron | 30.0% |
!!! | TGTTTCAGGTGTTGATTTTT+AGG | - | chr1_4:1843705-1843724 | Msa0142920:intron | 30.0% |
!! | ATTTTTAGGCTTATAACACG+AGG | - | chr1_4:1843719-1843738 | Msa0142920:intron | 30.0% |
AACAATTGAAGAAAGGATGA+TGG | - | chr1_4:1843742-1843761 | Msa0142920:intron | 30.0% | |
GGAAATAACTAAGAAGAAGA+TGG | - | chr1_4:1843763-1843782 | Msa0142920:intron | 30.0% | |
AAAGGCTCAAAACATAAAAC+AGG | - | chr1_4:1843811-1843830 | Msa0142920:intron | 30.0% | |
GCATAATCATGTTATACTTC+AGG | + | chr1_4:1844050-1844069 | None:intergenic | 30.0% | |
! | TGGAAAATCTTGTGAGTTTT+AGG | + | chr1_4:1844354-1844373 | None:intergenic | 30.0% |
TGATTGAACTAAACATGTCA+AGG | + | chr1_4:1844551-1844570 | None:intergenic | 30.0% | |
TTAGTTCAATCATGCTGAAT+TGG | - | chr1_4:1844559-1844578 | Msa0142920:intron | 30.0% | |
! | AGATTGTAGGAATTGAGTTT+TGG | + | chr1_4:1844687-1844706 | None:intergenic | 30.0% |
CCTAGAACATATTATCTATC+AGG | + | chr1_4:1844799-1844818 | None:intergenic | 30.0% | |
CCTGATAGATAATATGTTCT+AGG | - | chr1_4:1844796-1844815 | Msa0142920:intron | 30.0% | |
! | GATAGATAATATGTTCTAGG+TGG | - | chr1_4:1844799-1844818 | Msa0142920:intron | 30.0% |
! | TGAATATGTTGATAAAGTCG+AGG | - | chr1_4:1844829-1844848 | Msa0142920:CDS | 30.0% |
! | TTTCCAGATGGTTTCTTTTA+AGG | - | chr1_4:1845115-1845134 | Msa0142920:CDS | 30.0% |
! | TTCCAGATGGTTTCTTTTAA+GGG | - | chr1_4:1845116-1845135 | Msa0142920:CDS | 30.0% |
TGTATTACAAGCTTTCTTCT+TGG | + | chr1_4:1845258-1845277 | None:intergenic | 30.0% | |
CTCTTTAATATGTAAGGGTT+AGG | + | chr1_4:1845514-1845533 | None:intergenic | 30.0% | |
CTAACCCTTACATATTAAAG+AGG | - | chr1_4:1845512-1845531 | Msa0142920:intron | 30.0% | |
! | TCATTTGGTTAGTCAATAAC+AGG | - | chr1_4:1845565-1845584 | Msa0142920:intron | 30.0% |
! | TGAAGTACTCGTTAGAATTT+CGG | - | chr1_4:1845983-1846002 | Msa0142920:intron | 30.0% |
!! | TTTCGGTTTTGTCATTGATA+AGG | - | chr1_4:1846000-1846019 | Msa0142920:intron | 30.0% |
!! | TTCGGTTTTGTCATTGATAA+GGG | - | chr1_4:1846001-1846020 | Msa0142920:intron | 30.0% |
TTTGTCATTGATAAGGGAAA+AGG | - | chr1_4:1846007-1846026 | Msa0142920:intron | 30.0% | |
! | GTTTTCCTCATCTTCAAATA+TGG | - | chr1_4:1846297-1846316 | Msa0142920:intron | 30.0% |
TCATTCCATATTTGAAGATG+AGG | + | chr1_4:1846305-1846324 | None:intergenic | 30.0% | |
ATCTTCAAATATGGAATGAC+AGG | - | chr1_4:1846306-1846325 | Msa0142920:intron | 30.0% | |
! | AGTTCTTTTCTATTAAGGCA+TGG | - | chr1_4:1846657-1846676 | Msa0142920:intron | 30.0% |
TTTCTATTAAGGCATGGATA+TGG | - | chr1_4:1846663-1846682 | Msa0142920:intron | 30.0% | |
!! | GTCAGATATTGTTGATGATA+AGG | - | chr1_4:1846692-1846711 | Msa0142920:intron | 30.0% |
!! | TATTTCTCTTTGGAATAGAC+AGG | - | chr1_4:1847088-1847107 | Msa0142920:intron | 30.0% |
! | TTTGAGTTTGAAAAGGTAGT+TGG | - | chr1_4:1847112-1847131 | Msa0142920:intron | 30.0% |
!!! | CAAGGTTTGTTTTACACATA+GGG | - | chr1_4:1847232-1847251 | Msa0142920:intron | 30.0% |
AGTACAATACAAAGCATGAT+TGG | - | chr1_4:1847265-1847284 | Msa0142920:intron | 30.0% | |
!! | TTTCTTTGAAGACCTTTTCT+CGG | - | chr1_4:1847516-1847535 | Msa0142920:intron | 30.0% |
TTTACCTCATTGTAAAGATG+AGG | + | chr1_4:1847663-1847682 | None:intergenic | 30.0% | |
ACAAAACTAGAAACCATTGT+TGG | - | chr1_4:1847873-1847892 | Msa0142920:CDS | 30.0% | |
! | TCAAACTTTTCCTGAGTTGT+CGG | + | chr1_4:1837131-1837150 | None:intergenic | 35.0% |
CGGAAATGGTTAAAGCAAAA+AGG | + | chr1_4:1837191-1837210 | None:intergenic | 35.0% | |
TTTGCTTTAACCATTTCCGT+TGG | - | chr1_4:1837192-1837211 | Msa0142920:intron | 35.0% | |
TTGCTTTAACCATTTCCGTT+GGG | - | chr1_4:1837193-1837212 | Msa0142920:intron | 35.0% | |
TAAAATGAACCCAACGGAAA+TGG | + | chr1_4:1837205-1837224 | None:intergenic | 35.0% | |
ACTGGATAAAATGAACCCAA+CGG | + | chr1_4:1837211-1837230 | None:intergenic | 35.0% | |
! | TCGGAATTTTCAGTCTAACT+CGG | - | chr1_4:1837334-1837353 | Msa0142920:CDS | 35.0% |
TACGAAGTAAATTTCCACCA+AGG | + | chr1_4:1837364-1837383 | None:intergenic | 35.0% | |
ACTTGATATATGTTGTGCCA+AGG | - | chr1_4:1837544-1837563 | Msa0142920:intron | 35.0% | |
!!! | TGCCAAGGTTTTGTTATTTG+TGG | - | chr1_4:1837559-1837578 | Msa0142920:intron | 35.0% |
CACCACAAATAACAAAACCT+TGG | + | chr1_4:1837564-1837583 | None:intergenic | 35.0% | |
GAGAAAGTGATCAAAACTCT+CGG | + | chr1_4:1837602-1837621 | None:intergenic | 35.0% | |
ATGAGAATGTGCATGAGAAT+GGG | + | chr1_4:1837720-1837739 | None:intergenic | 35.0% | |
AATGAGAATGTGCATGAGAA+TGG | + | chr1_4:1837721-1837740 | None:intergenic | 35.0% | |
GAAACATCATAACAAGGAGT+AGG | + | chr1_4:1837876-1837895 | None:intergenic | 35.0% | |
! | GACATGAATCCGTTTTCTAT+TGG | + | chr1_4:1837908-1837927 | None:intergenic | 35.0% |
AATTGGTTGAGATTCGGAAA+TGG | + | chr1_4:1838356-1838375 | None:intergenic | 35.0% | |
!!! | CAGAGTCTTTTTTATCACTG+CGG | - | chr1_4:1838458-1838477 | Msa0142920:intron | 35.0% |
CTATGAGATGATTATGTTCC+TGG | - | chr1_4:1838739-1838758 | Msa0142920:intron | 35.0% | |
TAAAATCATTTCAGAGGGGA+AGG | + | chr1_4:1839002-1839021 | None:intergenic | 35.0% | |
CAATGAAGTATGTTGTTGCA+TGG | - | chr1_4:1839057-1839076 | Msa0142920:intron | 35.0% | |
!!! | TGCATGGCTTGGAATTTTTT+TGG | - | chr1_4:1839073-1839092 | Msa0142920:intron | 35.0% |
AGAAGGAATATCTTGTGAAG+TGG | - | chr1_4:1839183-1839202 | Msa0142920:CDS | 35.0% | |
TTCCTTATGATGAATGCCAT+TGG | - | chr1_4:1839213-1839232 | Msa0142920:intron | 35.0% | |
TCCTTATGATGAATGCCATT+GGG | - | chr1_4:1839214-1839233 | Msa0142920:intron | 35.0% | |
ACTACATCCATATCAACTTG+AGG | - | chr1_4:1839559-1839578 | Msa0142920:CDS | 35.0% | |
CTACATCCATATCAACTTGA+GGG | - | chr1_4:1839560-1839579 | Msa0142920:CDS | 35.0% | |
!! | TTCAATCCCTCAAGTTGATA+TGG | + | chr1_4:1839569-1839588 | None:intergenic | 35.0% |
TGAACTTCTTACGTTTCTCT+TGG | - | chr1_4:1839585-1839604 | Msa0142920:CDS | 35.0% | |
GACAAGCATTCTCTTTCAAA+AGG | + | chr1_4:1839804-1839823 | None:intergenic | 35.0% | |
TTGTTCTTCTTCGGATTCTT+CGG | + | chr1_4:1840041-1840060 | None:intergenic | 35.0% | |
ATCCGAAGAAGAACAAGAAA+AGG | - | chr1_4:1840045-1840064 | Msa0142920:CDS | 35.0% | |
ATCATTGAAGCCCATAAAGT+GGG | - | chr1_4:1840160-1840179 | Msa0142920:CDS | 35.0% | |
!! | TACATGCAGATAGTTGATGA+AGG | - | chr1_4:1840307-1840326 | Msa0142920:intron | 35.0% |
!!! | TAGAGTCCTTGTTTTTGAGT+CGG | + | chr1_4:1840336-1840355 | None:intergenic | 35.0% |
GGATTAGGCATAATTTCGTT+TGG | + | chr1_4:1840658-1840677 | None:intergenic | 35.0% | |
GTAATACTAGGGTTCGAAAA+TGG | + | chr1_4:1840683-1840702 | None:intergenic | 35.0% | |
! | GTAGCAACTTTTCTTAGCTA+AGG | - | chr1_4:1840954-1840973 | Msa0142920:intron | 35.0% |
GTATCATATGTACGTTCCAT+AGG | + | chr1_4:1841000-1841019 | None:intergenic | 35.0% | |
!! | GCATGTGTTGAGTTTTATGT+TGG | - | chr1_4:1841076-1841095 | Msa0142920:intron | 35.0% |
! | TCTGAAATGCATCAAACATG+TGG | + | chr1_4:1841120-1841139 | None:intergenic | 35.0% |
AAGATACGTTGGACCTTTAA+GGG | + | chr1_4:1841248-1841267 | None:intergenic | 35.0% | |
TAAGATACGTTGGACCTTTA+AGG | + | chr1_4:1841249-1841268 | None:intergenic | 35.0% | |
TTCAATTGCTTCTGGTAGTT+TGG | - | chr1_4:1841275-1841294 | Msa0142920:CDS | 35.0% | |
AGAGTTCCAAGAAGAGTTTA+AGG | - | chr1_4:1841307-1841326 | Msa0142920:intron | 35.0% | |
TATAATAGCACATGCTCTGT+TGG | - | chr1_4:1841449-1841468 | Msa0142920:intron | 35.0% | |
TCGTGATCACTCTTAAGTAA+TGG | - | chr1_4:1841612-1841631 | Msa0142920:intron | 35.0% | |
TTCTTAACCGTTGCTTCATA+AGG | - | chr1_4:1841959-1841978 | Msa0142920:CDS | 35.0% | |
CTTCTTTCCTTATGAAGCAA+CGG | + | chr1_4:1841969-1841988 | None:intergenic | 35.0% | |
ATGTTGTCATCCATACATGT+TGG | - | chr1_4:1842080-1842099 | Msa0142920:intron | 35.0% | |
!! | ATTTGGTTTGTAGTGCAAGA+GGG | + | chr1_4:1842528-1842547 | None:intergenic | 35.0% |
!! | AATTTGGTTTGTAGTGCAAG+AGG | + | chr1_4:1842529-1842548 | None:intergenic | 35.0% |
AGACAAATACTGGAATCATC+AGG | - | chr1_4:1842781-1842800 | Msa0142920:intron | 35.0% | |
GACAAATACTGGAATCATCA+GGG | - | chr1_4:1842782-1842801 | Msa0142920:intron | 35.0% | |
ATGATGAAGCTTAAAGAGCA+AGG | - | chr1_4:1842829-1842848 | Msa0142920:intron | 35.0% | |
TGATGAAGCTTAAAGAGCAA+GGG | - | chr1_4:1842830-1842849 | Msa0142920:intron | 35.0% | |
AGGATAGATGGAAATGTTGA+TGG | - | chr1_4:1843038-1843057 | Msa0142920:intron | 35.0% | |
ATGGAGATGAAAGACAAGTA+CGG | - | chr1_4:1843057-1843076 | Msa0142920:intron | 35.0% | |
TTTCTTCTTTCTACTAGAGC+TGG | - | chr1_4:1843119-1843138 | Msa0142920:CDS | 35.0% | |
AGTCATGTTAAGCACCATAT+AGG | + | chr1_4:1843308-1843327 | None:intergenic | 35.0% | |
TTTCTTGGCTCATTTCTTTC+TGG | - | chr1_4:1843334-1843353 | Msa0142920:intron | 35.0% | |
CACATAACTTCTTGTGTTTC+AGG | - | chr1_4:1843691-1843710 | Msa0142920:CDS | 35.0% | |
TTATCATGCTTAGGAAGAGT+TGG | - | chr1_4:1843906-1843925 | Msa0142920:intron | 35.0% | |
! | ATTTGCTGATGAGAATGATG+TGG | - | chr1_4:1843960-1843979 | Msa0142920:intron | 35.0% |
ACTTTGTTACCTGTCAATAG+CGG | + | chr1_4:1844019-1844038 | None:intergenic | 35.0% | |
! | TGGATTTCTGAAAGCCTTTA+AGG | - | chr1_4:1844170-1844189 | Msa0142920:intron | 35.0% |
CGTATGAGAGTTAACCTTAA+AGG | + | chr1_4:1844187-1844206 | None:intergenic | 35.0% | |
!!! | AGGAATTGAGTTTTGGACTA+GGG | + | chr1_4:1844680-1844699 | None:intergenic | 35.0% |
!!! | TAGGAATTGAGTTTTGGACT+AGG | + | chr1_4:1844681-1844700 | None:intergenic | 35.0% |
! | CTTCAGAAGGAAAACACTTT+TGG | - | chr1_4:1844852-1844871 | Msa0142920:CDS | 35.0% |
! | AGAAGGAAAACACTTTTGGA+AGG | - | chr1_4:1844856-1844875 | Msa0142920:CDS | 35.0% |
TGGAAGGAATTGCTAAAAGA+CGG | - | chr1_4:1844872-1844891 | Msa0142920:CDS | 35.0% | |
TATACAAGTAAATGACACGG+TGG | + | chr1_4:1844973-1844992 | None:intergenic | 35.0% | |
! | TTTTGTTGAGGTTGTATACG+TGG | - | chr1_4:1845083-1845102 | Msa0142920:intron | 35.0% |
! | TCCAGATGGTTTCTTTTAAG+GGG | - | chr1_4:1845117-1845136 | Msa0142920:CDS | 35.0% |
GATTATGAAGTGGATCATAC+TGG | - | chr1_4:1845188-1845207 | Msa0142920:CDS | 35.0% | |
TTACAAGCTTTCTTCTTGGA+AGG | + | chr1_4:1845254-1845273 | None:intergenic | 35.0% | |
TTTCCTTCACCTTCCATTAA+AGG | + | chr1_4:1845386-1845405 | None:intergenic | 35.0% | |
GGAAAATCGCTAAAAGTTCT+TGG | - | chr1_4:1845401-1845420 | Msa0142920:CDS | 35.0% | |
CTTTCCTTCAGACTTTAATG+AGG | - | chr1_4:1845447-1845466 | Msa0142920:intron | 35.0% | |
GTAACCTCATTAAAGTCTGA+AGG | + | chr1_4:1845454-1845473 | None:intergenic | 35.0% | |
! | TGGTTAGTCAATAACAGGTT+TGG | - | chr1_4:1845570-1845589 | Msa0142920:intron | 35.0% |
! | GGTTAGTCAATAACAGGTTT+GGG | - | chr1_4:1845571-1845590 | Msa0142920:intron | 35.0% |
GTTAGTCAATAACAGGTTTG+GGG | - | chr1_4:1845572-1845591 | Msa0142920:intron | 35.0% | |
ATAAGTCTTCTGCTTCATGT+GGG | + | chr1_4:1845628-1845647 | None:intergenic | 35.0% | |
CAGCAATATGAGACAAGAAA+AGG | + | chr1_4:1845805-1845824 | None:intergenic | 35.0% | |
ATCTATCACCTGAGAATGTA+GGG | + | chr1_4:1845844-1845863 | None:intergenic | 35.0% | |
GAGAACTATCACAGGAATAA+GGG | + | chr1_4:1845867-1845886 | None:intergenic | 35.0% | |
AGAGAACTATCACAGGAATA+AGG | + | chr1_4:1845868-1845887 | None:intergenic | 35.0% | |
ATCTACAGACACATTTCAAC+AGG | + | chr1_4:1845934-1845953 | None:intergenic | 35.0% | |
TGTTGAAATGTGTCTGTAGA+TGG | - | chr1_4:1845933-1845952 | Msa0142920:intron | 35.0% | |
TCCAAAAGAAGGACTTCAAA+TGG | - | chr1_4:1845959-1845978 | Msa0142920:intron | 35.0% | |
!! | TCCATTTGAAGTCCTTCTTT+TGG | + | chr1_4:1845963-1845982 | None:intergenic | 35.0% |
AAGATGTCGTCTGAAAAAAG+TGG | + | chr1_4:1846361-1846380 | None:intergenic | 35.0% | |
! | GCTTGAGAAGTACAAAGATA+TGG | - | chr1_4:1846395-1846414 | Msa0142920:CDS | 35.0% |
! | GAGAAGTACAAAGATATGGA+AGG | - | chr1_4:1846399-1846418 | Msa0142920:CDS | 35.0% |
! | ACGTAGACACACATACATTT+TGG | + | chr1_4:1846534-1846553 | None:intergenic | 35.0% |
TTCATAAAGTTACCATCGCT+AGG | - | chr1_4:1846759-1846778 | Msa0142920:CDS | 35.0% | |
! | TTGAGACAATTTTCCAAGAG+AGG | + | chr1_4:1846990-1847009 | None:intergenic | 35.0% |
! | GACAGGATTTGAGTTTGAAA+AGG | - | chr1_4:1847105-1847124 | Msa0142920:intron | 35.0% |
CCTATGTGTAAAACAAACCT+TGG | + | chr1_4:1847234-1847253 | None:intergenic | 35.0% | |
!!! | CCAAGGTTTGTTTTACACAT+AGG | - | chr1_4:1847231-1847250 | Msa0142920:intron | 35.0% |
CAAAGGAAAAATCCGAGAAA+AGG | + | chr1_4:1847531-1847550 | None:intergenic | 35.0% | |
ATGGCTGCATGATACAATAA+TGG | - | chr1_4:1847732-1847751 | Msa0142920:intron | 35.0% | |
TGCACATCTGTCAATATAGA+GGG | + | chr1_4:1847797-1847816 | None:intergenic | 35.0% | |
TTGCACATCTGTCAATATAG+AGG | + | chr1_4:1847798-1847817 | None:intergenic | 35.0% | |
!! | CTGTTATCAGAACTTGTTGT+CGG | + | chr1_4:1847942-1847961 | None:intergenic | 35.0% |
!! | TGAGTTGTCGGACTTTTTCT+GGG | + | chr1_4:1837119-1837138 | None:intergenic | 40.0% |
CAACTCAGGAAAAGTTTGAG+AGG | - | chr1_4:1837132-1837151 | Msa0142920:CDS | 40.0% | |
GCACTACATGAAACCGATAT+CGG | - | chr1_4:1837315-1837334 | Msa0142920:intron | 40.0% | |
CAGATAAAAATGAGGCTGCA+AGG | + | chr1_4:1837517-1837536 | None:intergenic | 40.0% | |
! | TTTACATTGGTGCCTAACAG+AGG | - | chr1_4:1837642-1837661 | Msa0142920:CDS | 40.0% |
AAGTGGTGACAGTAAACAAC+CGG | + | chr1_4:1837991-1838010 | None:intergenic | 40.0% | |
! | TCAAGACGGGAGATTTTAAG+TGG | + | chr1_4:1838008-1838027 | None:intergenic | 40.0% |
! | AAATTTTCGGCAGCAACAGT+GGG | + | chr1_4:1838181-1838200 | None:intergenic | 40.0% |
ACTGTTGCTGCCGAAAATTT+GGG | - | chr1_4:1838181-1838200 | Msa0142920:CDS | 40.0% | |
!! | TGGTTTGGACCCCAAATTTT+CGG | + | chr1_4:1838194-1838213 | None:intergenic | 40.0% |
AGATATCGTTTCGCCAAACT+TGG | + | chr1_4:1838214-1838233 | None:intergenic | 40.0% | |
CGAAACGATATCTTGTGAAG+TGG | - | chr1_4:1838221-1838240 | Msa0142920:CDS | 40.0% | |
CGATATCTTGTGAAGTGGAA+CGG | - | chr1_4:1838226-1838245 | Msa0142920:CDS | 40.0% | |
! | TCATCGTCTGATTTTCTGAC+TGG | + | chr1_4:1838615-1838634 | None:intergenic | 40.0% |
TTCATCGAATACTTGCTTGC+AGG | - | chr1_4:1838670-1838689 | Msa0142920:intron | 40.0% | |
GGGAAGGAGACTAAAATACA+TGG | + | chr1_4:1838986-1839005 | None:intergenic | 40.0% | |
AAGTATGTTGTTGCATGGCT+TGG | - | chr1_4:1839062-1839081 | Msa0142920:intron | 40.0% | |
TCCCAATGGCATTCATCATA+AGG | + | chr1_4:1839218-1839237 | None:intergenic | 40.0% | |
ATAGCCCCGAATTTCTTTCA+GGG | - | chr1_4:1839393-1839412 | Msa0142920:intron | 40.0% | |
ATACCCCCTGAAAGAAATTC+GGG | + | chr1_4:1839401-1839420 | None:intergenic | 40.0% | |
CATACCCCCTGAAAGAAATT+CGG | + | chr1_4:1839402-1839421 | None:intergenic | 40.0% | |
!!! | TGGCTTGGTTTTTCATCTTC+AGG | - | chr1_4:1839745-1839764 | Msa0142920:CDS | 40.0% |
AGAGAATGCTTGTCCACATT+TGG | - | chr1_4:1839810-1839829 | Msa0142920:CDS | 40.0% | |
ACTTTCTACACTGCGAAACT+GGG | - | chr1_4:1839843-1839862 | Msa0142920:CDS | 40.0% | |
TCTAATAGTGCTACGAGCTT+GGG | + | chr1_4:1840000-1840019 | None:intergenic | 40.0% | |
CTTTATGGGCTTCAATGATG+CGG | + | chr1_4:1840159-1840178 | None:intergenic | 40.0% | |
CATCATTGAAGCCCATAAAG+TGG | - | chr1_4:1840159-1840178 | Msa0142920:CDS | 40.0% | |
! | GGTTCGAAAATGGATGGATT+AGG | + | chr1_4:1840673-1840692 | None:intergenic | 40.0% |
TACTAGGGTTCGAAAATGGA+TGG | + | chr1_4:1840679-1840698 | None:intergenic | 40.0% | |
TAAAACTCAACACATGCACC+AGG | + | chr1_4:1841073-1841092 | None:intergenic | 40.0% | |
TTATGCACTTCCTTGATGCT+GGG | - | chr1_4:1841164-1841183 | Msa0142920:intron | 40.0% | |
ATCAAGAGCAACAAGTTTCG+AGG | - | chr1_4:1841336-1841355 | Msa0142920:intron | 40.0% | |
TTCGAGGCTTCATACATTGT+TGG | - | chr1_4:1841352-1841371 | Msa0142920:intron | 40.0% | |
TATACTTCGTAGGAGATGTG+GGG | + | chr1_4:1841378-1841397 | None:intergenic | 40.0% | |
GTATACTTCGTAGGAGATGT+GGG | + | chr1_4:1841379-1841398 | None:intergenic | 40.0% | |
TGTATACTTCGTAGGAGATG+TGG | + | chr1_4:1841380-1841399 | None:intergenic | 40.0% | |
! | ATGTGAGGAAGTACAGAAGA+AGG | + | chr1_4:1841504-1841523 | None:intergenic | 40.0% |
TAAGAAACCTCGATCATGTG+AGG | + | chr1_4:1841519-1841538 | None:intergenic | 40.0% | |
! | TGAGAACAGAAGAAGCACAA+AGG | + | chr1_4:1841547-1841566 | None:intergenic | 40.0% |
CTTAAGAGTGATCACGAACA+CGG | + | chr1_4:1841609-1841628 | None:intergenic | 40.0% | |
!! | CAATTGTTTTATACCCCTGC+AGG | - | chr1_4:1841752-1841771 | Msa0142920:intron | 40.0% |
GACTGAACTACCTCCTAAAA+AGG | - | chr1_4:1841793-1841812 | Msa0142920:intron | 40.0% | |
TATGAGATATTAACTCGCCG+TGG | - | chr1_4:1841884-1841903 | Msa0142920:CDS | 40.0% | |
TGTCATCCATACATGTTGGA+AGG | - | chr1_4:1842084-1842103 | Msa0142920:intron | 40.0% | |
TCAACTCCTTCCAACATGTA+TGG | + | chr1_4:1842093-1842112 | None:intergenic | 40.0% | |
! | TACTGGTTGCTCTGCTTATT+TGG | - | chr1_4:1842201-1842220 | Msa0142920:CDS | 40.0% |
!!! | TGTTTTGGTGCCATAAACAC+AGG | + | chr1_4:1842303-1842322 | None:intergenic | 40.0% |
! | GGCACCAAAACAAGTCTTTT+AGG | - | chr1_4:1842311-1842330 | Msa0142920:intron | 40.0% |
TAGGCATTACTCTAGCACAA+TGG | - | chr1_4:1842330-1842349 | Msa0142920:intron | 40.0% | |
ATTACTCTAGCACAATGGTG+TGG | - | chr1_4:1842335-1842354 | Msa0142920:intron | 40.0% | |
GAATTTCAGTTTGCACTCTG+GGG | + | chr1_4:1842379-1842398 | None:intergenic | 40.0% | |
GGAATTTCAGTTTGCACTCT+GGG | + | chr1_4:1842380-1842399 | None:intergenic | 40.0% | |
TGGAATTTCAGTTTGCACTC+TGG | + | chr1_4:1842381-1842400 | None:intergenic | 40.0% | |
!!! | AGTTTTGGTGGGGGTATTTT+AGG | - | chr1_4:1842428-1842447 | Msa0142920:intron | 40.0% |
!!! | GTTTTGGTGGGGGTATTTTA+GGG | - | chr1_4:1842429-1842448 | Msa0142920:intron | 40.0% |
CTCCTCAAGTTTGTGATAAG+AGG | - | chr1_4:1842477-1842496 | Msa0142920:intron | 40.0% | |
AGCCTCTTATCACAAACTTG+AGG | + | chr1_4:1842482-1842501 | None:intergenic | 40.0% | |
! | ATCCACTACACAGTGCTATT+CGG | - | chr1_4:1842659-1842678 | Msa0142920:intron | 40.0% |
ATCAGGGAAGTTGCAATTGT+TGG | - | chr1_4:1842798-1842817 | Msa0142920:intron | 40.0% | |
! | TTCTCAATTTAAGGGCATGC+TGG | - | chr1_4:1842870-1842889 | Msa0142920:CDS | 40.0% |
TGGCAGTATGAAAGGATAGA+TGG | - | chr1_4:1843026-1843045 | Msa0142920:intron | 40.0% | |
ATTGGGGATAAACCTTGCAA+CGG | - | chr1_4:1843145-1843164 | Msa0142920:CDS | 40.0% | |
ACCCTACGTTACTTGATTAG+AGG | - | chr1_4:1843240-1843259 | Msa0142920:intron | 40.0% | |
CCCTCTAATCAAGTAACGTA+GGG | + | chr1_4:1843244-1843263 | None:intergenic | 40.0% | |
CCCTACGTTACTTGATTAGA+GGG | - | chr1_4:1843241-1843260 | Msa0142920:intron | 40.0% | |
TCCCTCTAATCAAGTAACGT+AGG | + | chr1_4:1843245-1843264 | None:intergenic | 40.0% | |
!! | TCGAGTTGGACAAACTAACA+AGG | - | chr1_4:1843515-1843534 | Msa0142920:intron | 40.0% |
CACGAGGAACAATTGAAGAA+AGG | - | chr1_4:1843735-1843754 | Msa0142920:intron | 40.0% | |
GTGTTAGAACACGTAGTTGT+AGG | - | chr1_4:1843785-1843804 | Msa0142920:intron | 40.0% | |
ATACCTATTCACCAACCTCA+GGG | + | chr1_4:1844382-1844401 | None:intergenic | 40.0% | |
AATACCTATTCACCAACCTC+AGG | + | chr1_4:1844383-1844402 | None:intergenic | 40.0% | |
GGTATTCTAAACTCCCAGAT+TGG | - | chr1_4:1844397-1844416 | Msa0142920:intron | 40.0% | |
GTACTCTATATGTGCGAAAC+AGG | + | chr1_4:1844486-1844505 | None:intergenic | 40.0% | |
AGTTGAAGAGCAAAATGCCT+TGG | - | chr1_4:1844910-1844929 | Msa0142920:CDS | 40.0% | |
GTTGAAGAGCAAAATGCCTT+GGG | - | chr1_4:1844911-1844930 | Msa0142920:CDS | 40.0% | |
AGCAAAATGCCTTGGGTAAA+GGG | - | chr1_4:1844918-1844937 | Msa0142920:CDS | 40.0% | |
!! | CCAGATGGTTTCTTTTAAGG+GGG | - | chr1_4:1845118-1845137 | Msa0142920:CDS | 40.0% |
! | GAGAATTTTGCTCGTCTAGA+AGG | - | chr1_4:1845140-1845159 | Msa0142920:CDS | 40.0% |
CGAGGAAGATGATTATGAAG+TGG | - | chr1_4:1845178-1845197 | Msa0142920:CDS | 40.0% | |
TATGAAGTGGATCATACTGG+TGG | - | chr1_4:1845191-1845210 | Msa0142920:CDS | 40.0% | |
TTTCTTCTTGGAAGGTCTTC+TGG | + | chr1_4:1845246-1845265 | None:intergenic | 40.0% | |
CACAAATCCACCACCTTTAA+TGG | - | chr1_4:1845370-1845389 | Msa0142920:CDS | 40.0% | |
AATCCACCACCTTTAATGGA+AGG | - | chr1_4:1845374-1845393 | Msa0142920:CDS | 40.0% | |
TAAGTCTTCTGCTTCATGTG+GGG | + | chr1_4:1845627-1845646 | None:intergenic | 40.0% | |
CATAAGTCTTCTGCTTCATG+TGG | + | chr1_4:1845629-1845648 | None:intergenic | 40.0% | |
AATGATTCCCCTACATTCTC+AGG | - | chr1_4:1845833-1845852 | Msa0142920:intron | 40.0% | |
TCTATCACCTGAGAATGTAG+GGG | + | chr1_4:1845843-1845862 | None:intergenic | 40.0% | |
GATCTATCACCTGAGAATGT+AGG | + | chr1_4:1845845-1845864 | None:intergenic | 40.0% | |
GATACAGAGAGAACTATCAC+AGG | + | chr1_4:1845875-1845894 | None:intergenic | 40.0% | |
ACAGACACATTTCAACAGGA+GGG | + | chr1_4:1845930-1845949 | None:intergenic | 40.0% | |
TACAGACACATTTCAACAGG+AGG | + | chr1_4:1845931-1845950 | None:intergenic | 40.0% | |
GTAGATGGTGTTCCAAAAGA+AGG | - | chr1_4:1845948-1845967 | Msa0142920:intron | 40.0% | |
AAATTCGCATCAGAGAATCC+TGG | - | chr1_4:1846331-1846350 | Msa0142920:CDS | 40.0% | |
TTTCAGACGACATCTTGTCA+CGG | - | chr1_4:1846365-1846384 | Msa0142920:CDS | 40.0% | |
TAAGGCATGGATATGGAAAG+TGG | - | chr1_4:1846670-1846689 | Msa0142920:intron | 40.0% | |
TATTCAGAGAGTCATCTGTC+AGG | - | chr1_4:1846722-1846741 | Msa0142920:intron | 40.0% | |
! | GTTGGCTCTCAAGTGAAAAA+TGG | - | chr1_4:1846786-1846805 | Msa0142920:CDS | 40.0% |
TGGTGCAAATATGCCAAATG+TGG | - | chr1_4:1846806-1846825 | Msa0142920:CDS | 40.0% | |
TTCAAAGGGGATTCCACATT+TGG | + | chr1_4:1846822-1846841 | None:intergenic | 40.0% | |
AACCAGTCTAGGGAGAATAA+TGG | - | chr1_4:1846840-1846859 | Msa0142920:CDS | 40.0% | |
TACCATTATTCTCCCTAGAC+TGG | + | chr1_4:1846845-1846864 | None:intergenic | 40.0% | |
AAGAAAGAGGTTTCCTCTCT+TGG | - | chr1_4:1846974-1846993 | Msa0142920:CDS | 40.0% | |
ATGCTCATGTTTAACTGCCA+AGG | - | chr1_4:1847214-1847233 | Msa0142920:intron | 40.0% | |
GTTTGAGTAGGTTCATTTCG+AGG | + | chr1_4:1847386-1847405 | None:intergenic | 40.0% | |
! | TATCTCGTTTGGGTTTGAGT+AGG | + | chr1_4:1847398-1847417 | None:intergenic | 40.0% |
! | AGGCAGTTGATATCTCGTTT+GGG | + | chr1_4:1847408-1847427 | None:intergenic | 40.0% |
!!! | CTTCCATTTTTTGCAGCTTC+AGG | - | chr1_4:1847588-1847607 | Msa0142920:intron | 40.0% |
TCTCCTGAAGCTGCAAAAAA+TGG | + | chr1_4:1847594-1847613 | None:intergenic | 40.0% | |
CTTGTGACAGTGATCCTAAT+CGG | - | chr1_4:1847628-1847647 | Msa0142920:intron | 40.0% | |
ACTGCCTCATCTTTACAATG+AGG | - | chr1_4:1847656-1847675 | Msa0142920:intron | 40.0% | |
TTTCATACATCGATGTCCAG+AGG | - | chr1_4:1847846-1847865 | Msa0142920:CDS | 40.0% | |
!!! | TTCTAGTTTTGTCTGTCCTC+TGG | + | chr1_4:1847865-1847884 | None:intergenic | 40.0% |
TTTGTCGACAAGTCCAACAA+TGG | + | chr1_4:1847889-1847908 | None:intergenic | 40.0% | |
!! | CTGAGTTGTCGGACTTTTTC+TGG | + | chr1_4:1837120-1837139 | None:intergenic | 45.0% |
CAGAAAAAGTCCGACAACTC+AGG | - | chr1_4:1837118-1837137 | Msa0142920:CDS | 45.0% | |
AAAATGAGGCTGCAAGGTCT+TGG | + | chr1_4:1837511-1837530 | None:intergenic | 45.0% | |
! | ATTGGTGCCTAACAGAGGAA+CGG | - | chr1_4:1837647-1837666 | Msa0142920:intron | 45.0% |
ACGGATTCATGTCAAGCTTG+TGG | - | chr1_4:1837915-1837934 | Msa0142920:intron | 45.0% | |
TGTCAAGCTTGTGGAAAGAG+CGG | - | chr1_4:1837924-1837943 | Msa0142920:intron | 45.0% | |
TGCACTTATTCGTTCCACAC+CGG | - | chr1_4:1837969-1837988 | Msa0142920:intron | 45.0% | |
AAATCTCCCGTCTTGACAAC+TGG | - | chr1_4:1838012-1838031 | Msa0142920:CDS | 45.0% | |
AACCTGCACAGTCACACAAA+GGG | + | chr1_4:1838113-1838132 | None:intergenic | 45.0% | |
TAACCTGCACAGTCACACAA+AGG | + | chr1_4:1838114-1838133 | None:intergenic | 45.0% | |
! | CAAATTTTCGGCAGCAACAG+TGG | + | chr1_4:1838182-1838201 | None:intergenic | 45.0% |
CACTGTTGCTGCCGAAAATT+TGG | - | chr1_4:1838180-1838199 | Msa0142920:CDS | 45.0% | |
CTGTTGCTGCCGAAAATTTG+GGG | - | chr1_4:1838182-1838201 | Msa0142920:CDS | 45.0% | |
! | TTTGGGGTCCAAACCAAGTT+TGG | - | chr1_4:1838198-1838217 | Msa0142920:CDS | 45.0% |
TCGTTTCGCCAAACTTGGTT+TGG | + | chr1_4:1838209-1838228 | None:intergenic | 45.0% | |
!!! | TTTTTTATCACTGCGGCCTG+CGG | - | chr1_4:1838465-1838484 | Msa0142920:intron | 45.0% |
GCTTTCAGAAACTCTTGCTC+TGG | + | chr1_4:1838534-1838553 | None:intergenic | 45.0% | |
TTGTTGCCATTCGACCTGAA+TGG | - | chr1_4:1838640-1838659 | Msa0142920:CDS | 45.0% | |
!! | CATTCGACCTGAATGGACTA+CGG | - | chr1_4:1838647-1838666 | Msa0142920:CDS | 45.0% |
GTCGGATATCTCTTCGTTTC+AGG | - | chr1_4:1839244-1839263 | Msa0142920:intron | 45.0% | |
CATAGCCCCGAATTTCTTTC+AGG | - | chr1_4:1839392-1839411 | Msa0142920:intron | 45.0% | |
TAGCCCCGAATTTCTTTCAG+GGG | - | chr1_4:1839394-1839413 | Msa0142920:intron | 45.0% | |
TACCCCCTGAAAGAAATTCG+GGG | + | chr1_4:1839400-1839419 | None:intergenic | 45.0% | |
CTTGCTGATGAAATGGGACT+TGG | - | chr1_4:1839629-1839648 | Msa0142920:CDS | 45.0% | |
! | TAGCTGAAGCGTCACATTGA+TGG | - | chr1_4:1839725-1839744 | Msa0142920:intron | 45.0% |
GAATGCTTGTCCACATTTGG+TGG | - | chr1_4:1839813-1839832 | Msa0142920:CDS | 45.0% | |
CAGTTTCGCAGTGTAGAAAG+TGG | + | chr1_4:1839844-1839863 | None:intergenic | 45.0% | |
CACTTTCTACACTGCGAAAC+TGG | - | chr1_4:1839842-1839861 | Msa0142920:CDS | 45.0% | |
GGAGCGCGAATTTGAAAGAT+GGG | - | chr1_4:1839864-1839883 | Msa0142920:CDS | 45.0% | |
CTCTAATAGTGCTACGAGCT+TGG | + | chr1_4:1840001-1840020 | None:intergenic | 45.0% | |
GCTTCAATGATGCGGTATCT+TGG | + | chr1_4:1840151-1840170 | None:intergenic | 45.0% | |
ACCATGCACTCCCACTTTAT+GGG | + | chr1_4:1840173-1840192 | None:intergenic | 45.0% | |
TACCATGCACTCCCACTTTA+TGG | + | chr1_4:1840174-1840193 | None:intergenic | 45.0% | |
!! | AGGTCACCGACTCAAAAACA+AGG | - | chr1_4:1840327-1840346 | Msa0142920:intron | 45.0% |
! | AGACATCGTGTGCTTTTGAC+AGG | - | chr1_4:1840388-1840407 | Msa0142920:intron | 45.0% |
TTTGACAGGAACTCCTCTTC+AGG | - | chr1_4:1840402-1840421 | Msa0142920:intron | 45.0% | |
CTTATGCACTTCCTTGATGC+TGG | - | chr1_4:1841163-1841182 | Msa0142920:intron | 45.0% | |
TACTAACCTTCCCAGCATCA+AGG | + | chr1_4:1841177-1841196 | None:intergenic | 45.0% | |
TGTACTTCCTCACATGATCG+AGG | - | chr1_4:1841509-1841528 | Msa0142920:CDS | 45.0% | |
ATCCTTCTTCAATCCTGCAG+GGG | + | chr1_4:1841768-1841787 | None:intergenic | 45.0% | |
CATCCTTCTTCAATCCTGCA+GGG | + | chr1_4:1841769-1841788 | None:intergenic | 45.0% | |
ACATCCTTCTTCAATCCTGC+AGG | + | chr1_4:1841770-1841789 | None:intergenic | 45.0% | |
ATCTTACTTGTGCTCCACCA+CGG | + | chr1_4:1841904-1841923 | None:intergenic | 45.0% | |
TAGCACAATGGTGTGGTTCT+TGG | - | chr1_4:1842342-1842361 | Msa0142920:intron | 45.0% | |
! | AAACGCTATAGCGGGATAGT+GGG | + | chr1_4:1842632-1842651 | None:intergenic | 45.0% |
TATCCCGCTATAGCGTTTGT+GGG | - | chr1_4:1842634-1842653 | Msa0142920:intron | 45.0% | |
! | TCCACTACACAGTGCTATTC+GGG | - | chr1_4:1842660-1842679 | Msa0142920:intron | 45.0% |
TCAACTGTGCAGAAACGGAA+AGG | + | chr1_4:1842955-1842974 | None:intergenic | 45.0% | |
!! | ACCAGCATTGGCAGTATGAA+AGG | - | chr1_4:1843018-1843037 | Msa0142920:intron | 45.0% |
TCCTTTCATACTGCCAATGC+TGG | + | chr1_4:1843022-1843041 | None:intergenic | 45.0% | |
CTTCTTTCTACTAGAGCTGG+TGG | - | chr1_4:1843122-1843141 | Msa0142920:CDS | 45.0% | |
! | TTCTACTAGAGCTGGTGGAT+TGG | - | chr1_4:1843127-1843146 | Msa0142920:CDS | 45.0% |
!! | TCTACTAGAGCTGGTGGATT+GGG | - | chr1_4:1843128-1843147 | Msa0142920:CDS | 45.0% |
TCCGAGAGAAAAACACACAC+AGG | - | chr1_4:1843275-1843294 | Msa0142920:intron | 45.0% | |
! | CCCTGTGTGTGTTTTTCTCT+CGG | + | chr1_4:1843279-1843298 | None:intergenic | 45.0% |
CCGAGAGAAAAACACACACA+GGG | - | chr1_4:1843276-1843295 | Msa0142920:intron | 45.0% | |
ACACAGGGAATGCACCTATA+TGG | - | chr1_4:1843291-1843310 | Msa0142920:intron | 45.0% | |
CTTGGCTCATTTCTTTCTGG+TGG | - | chr1_4:1843337-1843356 | Msa0142920:intron | 45.0% | |
GAATCCTCATGCTGATCTAC+AGG | - | chr1_4:1843476-1843495 | Msa0142920:intron | 45.0% | |
ATAGCCTGTAGATCAGCATG+AGG | + | chr1_4:1843483-1843502 | None:intergenic | 45.0% | |
TCATGCTGATCTACAGGCTA+TGG | - | chr1_4:1843482-1843501 | Msa0142920:intron | 45.0% | |
!! | TAGCCTTATCCCACTAAGTG+GGG | + | chr1_4:1843651-1843670 | None:intergenic | 45.0% |
!! | CTAGCCTTATCCCACTAAGT+GGG | + | chr1_4:1843652-1843671 | None:intergenic | 45.0% |
ACACGTAGTTGTAGGCAGAA+AGG | - | chr1_4:1843793-1843812 | Msa0142920:intron | 45.0% | |
AAGAGTTGGACGACATCATC+AGG | - | chr1_4:1843920-1843939 | Msa0142920:intron | 45.0% | |
TTGGACGACATCATCAGGTA+TGG | - | chr1_4:1843925-1843944 | Msa0142920:intron | 45.0% | |
CATCATCAGGTATGGCTCAA+AGG | - | chr1_4:1843933-1843952 | Msa0142920:intron | 45.0% | |
CGGCATCGTCGTAATGAATT+TGG | + | chr1_4:1843999-1844018 | None:intergenic | 45.0% | |
TACCTATTCACCAACCTCAG+GGG | + | chr1_4:1844381-1844400 | None:intergenic | 45.0% | |
GATAAAGTCGAGGCTTCAGA+AGG | - | chr1_4:1844839-1844858 | Msa0142920:CDS | 45.0% | |
GAGCAAAATGCCTTGGGTAA+AGG | - | chr1_4:1844917-1844936 | Msa0142920:CDS | 45.0% | |
GTTTCGTTTCCCTTTACCCA+AGG | + | chr1_4:1844930-1844949 | None:intergenic | 45.0% | |
TGGGTAAAGGGAAACGAAAC+CGG | - | chr1_4:1844930-1844949 | Msa0142920:CDS | 45.0% | |
ACGAAACCGGACAACATTAC+TGG | - | chr1_4:1844943-1844962 | Msa0142920:CDS | 45.0% | |
GGCATACCAGTAATGTTGTC+CGG | + | chr1_4:1844952-1844971 | None:intergenic | 45.0% | |
!! | TGGTTCACTGACTTTCCAGA+TGG | - | chr1_4:1845103-1845122 | Msa0142920:intron | 45.0% |
CCCCCTTAAAAGAAACCATC+TGG | + | chr1_4:1845121-1845140 | None:intergenic | 45.0% | |
! | TTTGCTCGTCTAGAAGGTGT+AGG | - | chr1_4:1845146-1845165 | Msa0142920:CDS | 45.0% |
TCACCTTCCATTAAAGGTGG+TGG | + | chr1_4:1845380-1845399 | None:intergenic | 45.0% | |
CCTTCACCTTCCATTAAAGG+TGG | + | chr1_4:1845383-1845402 | None:intergenic | 45.0% | |
CCACCTTTAATGGAAGGTGA+AGG | - | chr1_4:1845380-1845399 | Msa0142920:CDS | 45.0% | |
! | GTCAATAACAGGTTTGGGGT+CGG | - | chr1_4:1845576-1845595 | Msa0142920:intron | 45.0% |
!!! | GTCGGCGATTTTGATTGGAA+GGG | - | chr1_4:1845594-1845613 | Msa0142920:CDS | 45.0% |
! | TCTGAAAAAAGTGGAGTGCC+AGG | + | chr1_4:1846352-1846371 | None:intergenic | 45.0% |
TTACCATCGCTAGGACAAGT+TGG | - | chr1_4:1846768-1846787 | Msa0142920:CDS | 45.0% | |
AATCCCCTTTGAACCAGTCT+AGG | - | chr1_4:1846829-1846848 | Msa0142920:CDS | 45.0% | |
ATCCCCTTTGAACCAGTCTA+GGG | - | chr1_4:1846830-1846849 | Msa0142920:CDS | 45.0% | |
! | TCTCCCTAGACTGGTTCAAA+GGG | + | chr1_4:1846836-1846855 | None:intergenic | 45.0% |
! | TTCTCCCTAGACTGGTTCAA+AGG | + | chr1_4:1846837-1846856 | None:intergenic | 45.0% |
CTGACATGAACTTTGTCTGC+AGG | - | chr1_4:1847325-1847344 | Msa0142920:intron | 45.0% | |
GCAGGACAAGATGAAAGCAA+CGG | - | chr1_4:1847343-1847362 | Msa0142920:intron | 45.0% | |
! | GAGGCAGTTGATATCTCGTT+TGG | + | chr1_4:1847409-1847428 | None:intergenic | 45.0% |
!! | CTTTGATTTGGGTACGCAGA+TGG | + | chr1_4:1847554-1847573 | None:intergenic | 45.0% |
GTATTGTCTCTCTTCAGCAG+CGG | - | chr1_4:1847692-1847711 | Msa0142920:intron | 45.0% | |
TTGACAGATGTGCAATGCTG+TGG | - | chr1_4:1847803-1847822 | Msa0142920:intron | 45.0% | |
TGCTGTGGCGAAAAATACTG+AGG | - | chr1_4:1847818-1847837 | Msa0142920:intron | 45.0% | |
!!! | ATTATTTTTAAATTTCATAA+TGG | - | chr1_4:1842161-1842180 | Msa0142920:CDS | 5.0% |
!! | AAAAAAAAGATAAAAAAATT+TGG | + | chr1_4:1842545-1842564 | None:intergenic | 5.0% |
!!! | ATTTTTCATTTATTTATTTA+AGG | - | chr1_4:1843205-1843224 | Msa0142920:CDS | 5.0% |
AGGGAAAGTGAGTACAGCAC+TGG | + | chr1_4:1837229-1837248 | None:intergenic | 50.0% | |
TACTCCACCGTTCCTCTGTT+AGG | + | chr1_4:1837657-1837676 | None:intergenic | 50.0% | |
GTGACAGTAAACAACCGGTG+TGG | + | chr1_4:1837986-1838005 | None:intergenic | 50.0% | |
GCACATCCAGTTGTCAAGAC+GGG | + | chr1_4:1838021-1838040 | None:intergenic | 50.0% | |
GGCACATCCAGTTGTCAAGA+CGG | + | chr1_4:1838022-1838041 | None:intergenic | 50.0% | |
TTCCCTTTGTGTGACTGTGC+AGG | - | chr1_4:1838108-1838127 | Msa0142920:CDS | 50.0% | |
! | TTTTTATCACTGCGGCCTGC+GGG | - | chr1_4:1838466-1838485 | Msa0142920:intron | 50.0% |
GGTAAATGGACAATACCCGC+AGG | + | chr1_4:1838484-1838503 | None:intergenic | 50.0% | |
CGTAGTCCATTCAGGTCGAA+TGG | + | chr1_4:1838649-1838668 | None:intergenic | 50.0% | |
CGATGAACCGTAGTCCATTC+AGG | + | chr1_4:1838657-1838676 | None:intergenic | 50.0% | |
ATGCCATTGGGAGCTTGAGT+CGG | - | chr1_4:1839226-1839245 | Msa0142920:intron | 50.0% | |
TATCCGACTCAAGCTCCCAA+TGG | + | chr1_4:1839232-1839251 | None:intergenic | 50.0% | |
AGCCCCGAATTTCTTTCAGG+GGG | - | chr1_4:1839395-1839414 | Msa0142920:intron | 50.0% | |
! | GAAGCGTCACATTGATGGCT+TGG | - | chr1_4:1839730-1839749 | Msa0142920:intron | 50.0% |
AGTGGAGCAACCACCAAATG+TGG | + | chr1_4:1839826-1839845 | None:intergenic | 50.0% | |
! | GGGAGCGCGAATTTGAAAGA+TGG | - | chr1_4:1839863-1839882 | Msa0142920:CDS | 50.0% |
! | AGCACATGCTCTGTTGGTAG+AGG | - | chr1_4:1841455-1841474 | Msa0142920:intron | 50.0% |
TACCCCTGCAGGATTGAAGA+AGG | - | chr1_4:1841763-1841782 | Msa0142920:intron | 50.0% | |
GAGATATTAACTCGCCGTGG+TGG | - | chr1_4:1841887-1841906 | Msa0142920:CDS | 50.0% | |
! | CAAACGCTATAGCGGGATAG+TGG | + | chr1_4:1842633-1842652 | None:intergenic | 50.0% |
CTATCCCGCTATAGCGTTTG+TGG | - | chr1_4:1842633-1842652 | Msa0142920:intron | 50.0% | |
ATCCCGCTATAGCGTTTGTG+GGG | - | chr1_4:1842635-1842654 | Msa0142920:intron | 50.0% | |
ATGCCCCACAAACGCTATAG+CGG | + | chr1_4:1842641-1842660 | None:intergenic | 50.0% | |
TCCCGAATAGCACTGTGTAG+TGG | + | chr1_4:1842664-1842683 | None:intergenic | 50.0% | |
!! | CTACTAGAGCTGGTGGATTG+GGG | - | chr1_4:1843129-1843148 | Msa0142920:CDS | 50.0% |
TAACTGTGTCTGCCGTTGCA+AGG | + | chr1_4:1843160-1843179 | None:intergenic | 50.0% | |
TTGTCCAACTCGATGAGCTC+TGG | + | chr1_4:1843508-1843527 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr1_4:1843647-1843666 | None:intergenic | 50.0% | |
!! | CCTAGCCTTATCCCACTAAG+TGG | + | chr1_4:1843653-1843672 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+AGG | - | chr1_4:1843650-1843669 | Msa0142920:CDS | 50.0% | |
GCTGATGAGAATGATGTGGC+TGG | - | chr1_4:1843964-1843983 | Msa0142920:intron | 50.0% | |
TTGTTGGATCGCGACCAAGT+TGG | - | chr1_4:1844111-1844130 | Msa0142920:intron | 50.0% | |
! | CGACCAAGTTGGAGATGAAG+AGG | - | chr1_4:1844122-1844141 | Msa0142920:intron | 50.0% |
! | AGATTTTCCATACCCCCCTG+AGG | - | chr1_4:1844364-1844383 | Msa0142920:intron | 50.0% |
ACCTATTCACCAACCTCAGG+GGG | + | chr1_4:1844380-1844399 | None:intergenic | 50.0% | |
! | CTAGAAGGTGTAGGCTCTGA+TGG | - | chr1_4:1845155-1845174 | Msa0142920:CDS | 50.0% |
!! | TTGGGGTCGGCGATTTTGAT+TGG | - | chr1_4:1845589-1845608 | Msa0142920:intron | 50.0% |
!!! | GGTCGGCGATTTTGATTGGA+AGG | - | chr1_4:1845593-1845612 | Msa0142920:CDS | 50.0% |
GACATCTTGTCACGGTATGC+AGG | - | chr1_4:1846373-1846392 | Msa0142920:CDS | 50.0% | |
! | CTCCCTAGACTGGTTCAAAG+GGG | + | chr1_4:1846835-1846854 | None:intergenic | 50.0% |
GGTAGTGCTGCAGCAGTTAA+TGG | - | chr1_4:1846861-1846880 | Msa0142920:intron | 50.0% | |
GCAGCAGTTAATGGAGCACA+TGG | - | chr1_4:1846870-1846889 | Msa0142920:intron | 50.0% | |
GGACAAGATGAAAGCAACGG+CGG | - | chr1_4:1847346-1847365 | Msa0142920:intron | 50.0% | |
TTTGGGTACGCAGATGGCAA+AGG | + | chr1_4:1847548-1847567 | None:intergenic | 50.0% | |
!! | TGAGGCAGTGTTGACCGATT+AGG | + | chr1_4:1847645-1847664 | None:intergenic | 50.0% |
!! | GGCTCTTGAGCGGATTGATT+TGG | + | chr1_4:1847921-1847940 | None:intergenic | 50.0% |
!! | ACTTGTTGTCGGCTCTTGAG+CGG | + | chr1_4:1847931-1847950 | None:intergenic | 50.0% |
CAGTCTAACTCGGCATGCCT+TGG | - | chr1_4:1837344-1837363 | Msa0142920:CDS | 55.0% | |
TCTAACTCGGCATGCCTTGG+TGG | - | chr1_4:1837347-1837366 | Msa0142920:CDS | 55.0% | |
! | CAGGGACAATGGTGCTGAGA+AGG | - | chr1_4:1839166-1839185 | Msa0142920:CDS | 55.0% |
! | GCCCATAAAGTGGGAGTGCA+TGG | - | chr1_4:1840169-1840188 | Msa0142920:CDS | 55.0% |
GCACTTCCTTGATGCTGGGA+AGG | - | chr1_4:1841168-1841187 | Msa0142920:intron | 55.0% | |
!! | TGCACTCTGGGGCATTGTAG+CGG | + | chr1_4:1842368-1842387 | None:intergenic | 55.0% |
!! | GCTATAGCGGGATAGTGGGA+TGG | + | chr1_4:1842628-1842647 | None:intergenic | 55.0% |
TGCCCCACAAACGCTATAGC+GGG | + | chr1_4:1842640-1842659 | None:intergenic | 55.0% | |
ATGGCCAGAGCTCATCGAGT+TGG | - | chr1_4:1843501-1843520 | Msa0142920:intron | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_4:1843639-1843658 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr1_4:1843638-1843657 | Msa0142920:CDS | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr1_4:1843639-1843658 | Msa0142920:CDS | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | chr1_4:1843645-1843664 | Msa0142920:CDS | 55.0% | |
ACGACGATGCCGCTATTGAC+AGG | - | chr1_4:1844007-1844026 | Msa0142920:intron | 55.0% | |
CGGCCTCTTCATCTCCAACT+TGG | + | chr1_4:1844128-1844147 | None:intergenic | 55.0% | |
TTTCCATACCCCCCTGAGGT+TGG | - | chr1_4:1844368-1844387 | Msa0142920:intron | 55.0% | |
CCTATTCACCAACCTCAGGG+GGG | + | chr1_4:1844379-1844398 | None:intergenic | 55.0% | |
GAGCCAACTTGTCCTAGCGA+TGG | + | chr1_4:1846774-1846793 | None:intergenic | 55.0% | |
GGTGCCTAACAGAGGAACGG+TGG | - | chr1_4:1837650-1837669 | Msa0142920:intron | 60.0% | |
TCACCAACCTCAGGGGGGTA+TGG | + | chr1_4:1844374-1844393 | None:intergenic | 60.0% | |
!! | CCCCCCTGAGGTTGGTGAAT+AGG | - | chr1_4:1844376-1844395 | Msa0142920:intron | 60.0% |
! | AGGTGTAGGCTCTGATGGCG+AGG | - | chr1_4:1845160-1845179 | Msa0142920:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 1837026 | 1847983 | 1837026 | ID=Msa0142920;Name=Msa0142920 |
chr1_4 | mRNA | 1837026 | 1847983 | 1837026 | ID=Msa0142920-mRNA-1;Parent=Msa0142920;Name=Msa0142920-mRNA-1;_AED=0.11;_eAED=0.13;_QI=0|0|0|1|1|1|29|0|1287 |
chr1_4 | exon | 1847837 | 1847983 | 1847837 | ID=Msa0142920-mRNA-1:exon:707;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1846960 | 1847097 | 1846960 | ID=Msa0142920-mRNA-1:exon:706;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1846737 | 1846879 | 1846737 | ID=Msa0142920-mRNA-1:exon:705;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1846318 | 1846482 | 1846318 | ID=Msa0142920-mRNA-1:exon:704;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1845593 | 1845840 | 1845593 | ID=Msa0142920-mRNA-1:exon:703;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1845359 | 1845454 | 1845359 | ID=Msa0142920-mRNA-1:exon:702;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1845106 | 1845242 | 1845106 | ID=Msa0142920-mRNA-1:exon:701;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1844819 | 1845031 | 1844819 | ID=Msa0142920-mRNA-1:exon:700;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1844586 | 1844693 | 1844586 | ID=Msa0142920-mRNA-1:exon:699;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1843820 | 1843870 | 1843820 | ID=Msa0142920-mRNA-1:exon:698;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1843617 | 1843716 | 1843617 | ID=Msa0142920-mRNA-1:exon:697;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1843093 | 1843235 | 1843093 | ID=Msa0142920-mRNA-1:exon:696;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1842864 | 1842967 | 1842864 | ID=Msa0142920-mRNA-1:exon:695;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1842088 | 1842226 | 1842088 | ID=Msa0142920-mRNA-1:exon:694;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1841817 | 1841986 | 1841817 | ID=Msa0142920-mRNA-1:exon:693;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1841473 | 1841539 | 1841473 | ID=Msa0142920-mRNA-1:exon:692;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1841177 | 1841296 | 1841177 | ID=Msa0142920-mRNA-1:exon:691;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1840981 | 1841090 | 1840981 | ID=Msa0142920-mRNA-1:exon:690;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1840818 | 1840899 | 1840818 | ID=Msa0142920-mRNA-1:exon:689;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1840045 | 1840191 | 1840045 | ID=Msa0142920-mRNA-1:exon:688;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1839740 | 1839887 | 1839740 | ID=Msa0142920-mRNA-1:exon:687;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1839541 | 1839649 | 1839541 | ID=Msa0142920-mRNA-1:exon:686;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1839155 | 1839216 | 1839155 | ID=Msa0142920-mRNA-1:exon:685;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1838981 | 1839057 | 1838981 | ID=Msa0142920-mRNA-1:exon:684;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1838551 | 1838681 | 1838551 | ID=Msa0142920-mRNA-1:exon:683;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1837972 | 1838335 | 1837972 | ID=Msa0142920-mRNA-1:exon:682;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1837566 | 1837662 | 1837566 | ID=Msa0142920-mRNA-1:exon:681;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1837332 | 1837405 | 1837332 | ID=Msa0142920-mRNA-1:exon:680;Parent=Msa0142920-mRNA-1 |
chr1_4 | exon | 1837026 | 1837199 | 1837026 | ID=Msa0142920-mRNA-1:exon:679;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1847837 | 1847983 | 1847837 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1846960 | 1847097 | 1846960 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1846737 | 1846879 | 1846737 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1846318 | 1846482 | 1846318 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1845593 | 1845840 | 1845593 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1845359 | 1845454 | 1845359 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1845106 | 1845242 | 1845106 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1844819 | 1845031 | 1844819 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1844586 | 1844693 | 1844586 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1843820 | 1843870 | 1843820 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1843617 | 1843716 | 1843617 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1843093 | 1843235 | 1843093 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1842864 | 1842967 | 1842864 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1842088 | 1842226 | 1842088 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1841817 | 1841986 | 1841817 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1841473 | 1841539 | 1841473 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1841177 | 1841296 | 1841177 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1840981 | 1841090 | 1840981 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1840818 | 1840899 | 1840818 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1840045 | 1840191 | 1840045 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1839740 | 1839887 | 1839740 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1839541 | 1839649 | 1839541 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1839155 | 1839216 | 1839155 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1838981 | 1839057 | 1838981 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1838551 | 1838681 | 1838551 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1837972 | 1838335 | 1837972 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1837566 | 1837662 | 1837566 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1837332 | 1837405 | 1837332 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
chr1_4 | CDS | 1837026 | 1837199 | 1837026 | ID=Msa0142920-mRNA-1:cds;Parent=Msa0142920-mRNA-1 |
Gene Sequence |
Protein sequence |